BLASTX 2.2.6 [Apr-09-2003]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2521918.2.1
(417 letters)
Database: nr
3,454,138 sequences; 1,185,965,366 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAD73776.1| Homoserine dehydrogenase-like [Oryza sativa... 115 3e-25
ref|NP_915351.1| P0460C04.14 [Oryza sativa (japonica cultiv... 115 3e-25
ref|NP_565825.2| unknown protein [Arabidopsis thaliana] >gi... 92 5e-18
gb|AAD21476.2| expressed protein [Arabidopsis thaliana] >gi... 92 5e-18
ref|NP_565827.2| unknown protein [Arabidopsis thaliana] 91 9e-18
gb|AAM51600.1| At2g35830/F11F19.26 [Arabidopsis thaliana] >... 91 9e-18
gb|AAM65456.1| unknown [Arabidopsis thaliana] 91 1e-17
ref|NP_565826.1| unknown protein [Arabidopsis thaliana] >gi... 89 5e-17
gb|AAM64294.1| unknown [Arabidopsis thaliana] 88 6e-17
ref|ZP_00518077.1| hypothetical protein CwatDRAFT_1422 [Cro... 79 3e-14
ref|ZP_00673219.1| hypothetical protein TeryDRAFT_3001 [Tri... 78 6e-14
dbj|BAB74722.1| all3023 [Nostoc sp. PCC 7120] >gi|17230515|... 77 1e-13
gb|ABA20512.1| conserved hypothetical protein [Anabaena var... 75 7e-13
ref|ZP_00108471.1| hypothetical protein Npun02004807 [Nosto... 74 1e-12
ref|YP_476295.1| hypothetical protein CYB_0031 [Cyanobacter... 62 4e-09
dbj|BAD94437.1| hypothetical protein [Arabidopsis thaliana] 59 3e-08
ref|YP_474087.1| truncated conserved hypothetical protein [... 59 5e-08
ref|ZP_01124588.1| hypothetical protein WH7805_05286 [Synec... 58 7e-08
gb|ABB26313.1| conserved hypothetical protein [Synechococcu... 57 1e-07
gb|ABB34302.1| conserved hypothetical protein [Synechococcu... 43 0.002
emb|CAE07970.1| conserved hypothetical protein [Synechococc... 43 0.003
ref|ZP_01140555.1| multi-domain beta-ketoacyl synthase [Geo... 35 0.60
ref|ZP_00677262.1| Beta-ketoacyl synthase:Acyl transferase ... 33 1.7
ref|XP_343466.2| PREDICTED: similar to RIKEN cDNA 1100001A2... 33 2.3
dbj|BAE67449.1| phosphoglycolate phosphatase [Xanthomonas o... 33 3.0
ref|YP_199403.1| phosphoglycolate phosphatase [Xanthomonas ... 33 3.0
ref|ZP_00108217.1| COG3321: Polyketide synthase modules and... 32 6.6
gb|AAQ56484.1| putative transposon protein [Oryza sativa (j... 31 8.6
gb|ABC21421.1| Photosynthetic reaction center, H-chain [Rho... 31 8.6
>dbj|BAD73776.1| Homoserine dehydrogenase-like [Oryza sativa (japonica
cultivar-group)]
Length = 187
Score = 115 bits (289), Expect = 3e-25
Identities = 52/61 (85%), Positives = 56/61 (91%)
Frame = +2
Query: 2 CVFRVSGPKFLKLNKGTWHAGPLFKADAVDFYNLELSNTNVVDHTTHHFKKHDGITFVVE 181
CVFRVSG KFLKL+ GTWHAGP FKADAVDFYNLELSNTN+VDHTTH FKK DG+TFV+E
Sbjct: 127 CVFRVSGAKFLKLHIGTWHAGPQFKADAVDFYNLELSNTNIVDHTTHDFKKDDGVTFVIE 186
Query: 182 D 184
D
Sbjct: 187 D 187
>ref|NP_915351.1| P0460C04.14 [Oryza sativa (japonica cultivar-group)]
Length = 244
Score = 115 bits (289), Expect = 3e-25
Identities = 52/61 (85%), Positives = 56/61 (91%)
Frame = +2
Query: 2 CVFRVSGPKFLKLNKGTWHAGPLFKADAVDFYNLELSNTNVVDHTTHHFKKHDGITFVVE 181
CVFRVSG KFLKL+ GTWHAGP FKADAVDFYNLELSNTN+VDHTTH FKK DG+TFV+E
Sbjct: 184 CVFRVSGAKFLKLHIGTWHAGPQFKADAVDFYNLELSNTNIVDHTTHDFKKDDGVTFVIE 243
Query: 182 D 184
D
Sbjct: 244 D 244
>ref|NP_565825.2| unknown protein [Arabidopsis thaliana]
gb|AAM45120.1| unknown protein [Arabidopsis thaliana]
gb|AAL36312.1| unknown protein [Arabidopsis thaliana]
Length = 199
Score = 91.7 bits (226), Expect = 5e-18
Identities = 40/57 (70%), Positives = 50/57 (87%), Gaps = 1/57 (1%)
Frame = +2
Query: 5 VFRVSGPKFLKLNKGTWHAGPLFKADAV-DFYNLELSNTNVVDHTTHHFKKHDGITF 172
VFR SGPKF+KL++GTWHAGPLF ++ DFYNLELSNTNVVDHT+H F K++G++F
Sbjct: 139 VFRFSGPKFVKLHRGTWHAGPLFSGSSIMDFYNLELSNTNVVDHTSHDFTKNNGVSF 195
>gb|AAD21476.2| expressed protein [Arabidopsis thaliana]
dbj|BAD94835.1| hypothetical protein [Arabidopsis thaliana]
Length = 185
Score = 91.7 bits (226), Expect = 5e-18
Identities = 40/57 (70%), Positives = 50/57 (87%), Gaps = 1/57 (1%)
Frame = +2
Query: 5 VFRVSGPKFLKLNKGTWHAGPLFKADAV-DFYNLELSNTNVVDHTTHHFKKHDGITF 172
VFR SGPKF+KL++GTWHAGPLF ++ DFYNLELSNTNVVDHT+H F K++G++F
Sbjct: 125 VFRFSGPKFVKLHRGTWHAGPLFSGSSIMDFYNLELSNTNVVDHTSHDFTKNNGVSF 181
>ref|NP_565827.2| unknown protein [Arabidopsis thaliana]
Length = 184
Score = 90.9 bits (224), Expect = 9e-18
Identities = 40/57 (70%), Positives = 50/57 (87%), Gaps = 1/57 (1%)
Frame = +2
Query: 5 VFRVSGPKFLKLNKGTWHAGPLFKADA-VDFYNLELSNTNVVDHTTHHFKKHDGITF 172
VFR SGPKF+KL++GTWHAGPLF + +DFYNLELSNTNVVDHT+H F K++G++F
Sbjct: 121 VFRFSGPKFVKLHRGTWHAGPLFSGSSFMDFYNLELSNTNVVDHTSHDFTKNNGVSF 177
>gb|AAM51600.1| At2g35830/F11F19.26 [Arabidopsis thaliana]
gb|AAD21474.2| expressed protein [Arabidopsis thaliana]
gb|AAL16102.1| At2g35830/F11F19.26 [Arabidopsis thaliana]
Length = 189
Score = 90.9 bits (224), Expect = 9e-18
Identities = 40/57 (70%), Positives = 50/57 (87%), Gaps = 1/57 (1%)
Frame = +2
Query: 5 VFRVSGPKFLKLNKGTWHAGPLFKADA-VDFYNLELSNTNVVDHTTHHFKKHDGITF 172
VFR SGPKF+KL++GTWHAGPLF + +DFYNLELSNTNVVDHT+H F K++G++F
Sbjct: 126 VFRFSGPKFVKLHRGTWHAGPLFSGSSFMDFYNLELSNTNVVDHTSHDFTKNNGVSF 182
>gb|AAM65456.1| unknown [Arabidopsis thaliana]
Length = 185
Score = 90.5 bits (223), Expect = 1e-17
Identities = 40/57 (70%), Positives = 49/57 (85%), Gaps = 1/57 (1%)
Frame = +2
Query: 5 VFRVSGPKFLKLNKGTWHAGPLFKADAV-DFYNLELSNTNVVDHTTHHFKKHDGITF 172
VFR SGPKF+KL+ GTWHAGPLF ++ DFYNLELSNTNVVDHT+H F K++G++F
Sbjct: 125 VFRFSGPKFVKLHTGTWHAGPLFSGSSIMDFYNLELSNTNVVDHTSHDFTKNNGVSF 181
>ref|NP_565826.1| unknown protein [Arabidopsis thaliana]
gb|AAD21475.2| expressed protein [Arabidopsis thaliana]
Length = 192
Score = 88.6 bits (218), Expect = 5e-17
Identities = 40/59 (67%), Positives = 46/59 (77%)
Frame = +2
Query: 5 VFRVSGPKFLKLNKGTWHAGPLFKADAVDFYNLELSNTNVVDHTTHHFKKHDGITFVVE 181
VFRVSGPKF+KLN GTWH GPLF +DFYNLELSNTN VD TT+ F K+ G+T V+
Sbjct: 125 VFRVSGPKFIKLNHGTWHVGPLFSDSYMDFYNLELSNTNAVDRTTYDFIKNKGVTIRVD 183
>gb|AAM64294.1| unknown [Arabidopsis thaliana]
Length = 192
Score = 88.2 bits (217), Expect = 6e-17
Identities = 39/59 (66%), Positives = 46/59 (77%)
Frame = +2
Query: 5 VFRVSGPKFLKLNKGTWHAGPLFKADAVDFYNLELSNTNVVDHTTHHFKKHDGITFVVE 181
+FRVSGPKF+KLN GTWH GPLF +DFYNLELSNTN VD TT+ F K+ G+T V+
Sbjct: 125 IFRVSGPKFIKLNHGTWHVGPLFSDSYMDFYNLELSNTNAVDRTTYDFIKNKGVTIRVD 183
>ref|ZP_00518077.1| hypothetical protein CwatDRAFT_1422 [Crocosphaera watsonii WH 8501]
gb|EAM48845.1| hypothetical protein CwatDRAFT_1422 [Crocosphaera watsonii WH 8501]
Length = 164
Score = 79.3 bits (194), Expect = 3e-14
Identities = 36/57 (63%), Positives = 42/57 (73%)
Frame = +2
Query: 8 FRVSGPKFLKLNKGTWHAGPLFKADAVDFYNLELSNTNVVDHTTHHFKKHDGITFVV 178
FR+ G F+KL GTWHAGP F D V+FYNLELSNTNVVDH T+ F K D +TF +
Sbjct: 106 FRIPGNCFIKLEVGTWHAGPYFDHDFVNFYNLELSNTNVVDHFTYDFLKKDNLTFEI 162
>ref|ZP_00673219.1| hypothetical protein TeryDRAFT_3001 [Trichodesmium erythraeum
IMS101]
gb|EAO28255.1| hypothetical protein TeryDRAFT_3001 [Trichodesmium erythraeum
IMS101]
Length = 163
Score = 78.2 bits (191), Expect = 6e-14
Identities = 35/57 (61%), Positives = 40/57 (70%)
Frame = +2
Query: 8 FRVSGPKFLKLNKGTWHAGPLFKADAVDFYNLELSNTNVVDHTTHHFKKHDGITFVV 178
F++ G F+KL GTWHAGP F D VDFYNLELSNTNVVDH TH F K + F +
Sbjct: 106 FKIPGNCFIKLEVGTWHAGPYFDQDFVDFYNLELSNTNVVDHFTHDFAKSHNLEFKI 162
>dbj|BAB74722.1| all3023 [Nostoc sp. PCC 7120]
ref|NP_487063.1| hypothetical protein all3023 [Nostoc sp. PCC 7120]
Length = 164
Score = 77.0 bits (188), Expect = 1e-13
Identities = 34/55 (61%), Positives = 41/55 (74%)
Frame = +2
Query: 8 FRVSGPKFLKLNKGTWHAGPLFKADAVDFYNLELSNTNVVDHTTHHFKKHDGITF 172
FR+ G F+KLN+GTWHAGP F + VDFYNLEL++TNVVDH TH F K + F
Sbjct: 107 FRIPGNCFIKLNQGTWHAGPYFDHEVVDFYNLELADTNVVDHFTHDFLKSHQLEF 161
>gb|ABA20512.1| conserved hypothetical protein [Anabaena variabilis ATCC 29413]
ref|YP_321407.1| hypothetical protein Ava_0888 [Anabaena variabilis ATCC 29413]
Length = 191
Score = 74.7 bits (182), Expect = 7e-13
Identities = 33/55 (60%), Positives = 40/55 (72%)
Frame = +2
Query: 8 FRVSGPKFLKLNKGTWHAGPLFKADAVDFYNLELSNTNVVDHTTHHFKKHDGITF 172
FR+ G F+KL +GTWHAGP F + VDFYNLEL++TNVVDH TH F K + F
Sbjct: 134 FRIPGNCFIKLKQGTWHAGPYFDHEVVDFYNLELADTNVVDHFTHDFLKSHQLEF 188
>ref|ZP_00108471.1| hypothetical protein Npun02004807 [Nostoc punctiforme PCC 73102]
Length = 165
Score = 73.9 bits (180), Expect = 1e-12
Identities = 33/55 (60%), Positives = 41/55 (74%)
Frame = +2
Query: 8 FRVSGPKFLKLNKGTWHAGPLFKADAVDFYNLELSNTNVVDHTTHHFKKHDGITF 172
FR+ G F+KL++GTWHAGP F + VDFYNLEL++TNVVDH TH F K + F
Sbjct: 107 FRIPGNCFIKLHEGTWHAGPHFDHETVDFYNLELADTNVVDHFTHDFFKSHQLEF 161
>ref|YP_476295.1| hypothetical protein CYB_0031 [Cyanobacteria bacterium Yellowstone
B-Prime]
gb|ABD01032.1| conserved hypothetical protein [Cyanobacteria bacterium Yellowstone
B-Prime]
Length = 161
Score = 62.4 bits (150), Expect = 4e-09
Identities = 27/45 (60%), Positives = 34/45 (75%), Gaps = 1/45 (2%)
Frame = +2
Query: 8 FRVSGPKFLKLNKGTWHAGPLF-KADAVDFYNLELSNTNVVDHTT 139
FRV G +F+KL GTWHAGP F + +DFYNLEL++TN+ DH T
Sbjct: 102 FRVPGDRFIKLEMGTWHAGPYFDHEEFIDFYNLELADTNITDHET 146
>dbj|BAD94437.1| hypothetical protein [Arabidopsis thaliana]
Length = 157
Score = 59.3 bits (142), Expect = 3e-08
Identities = 25/33 (75%), Positives = 27/33 (81%)
Frame = +2
Query: 5 VFRVSGPKFLKLNKGTWHAGPLFKADAVDFYNL 103
VFRVSGPKF+KLN GTWH GPLF +DFYNL
Sbjct: 125 VFRVSGPKFIKLNHGTWHVGPLFSDSYMDFYNL 157
>ref|YP_474087.1| truncated conserved hypothetical protein [Cyanobacteria bacterium
Yellowstone A-Prime]
gb|ABC98824.1| truncated conserved hypothetical protein [Cyanobacteria bacterium
Yellowstone A-Prime]
Length = 121
Score = 58.5 bits (140), Expect = 5e-08
Identities = 26/45 (57%), Positives = 33/45 (73%), Gaps = 1/45 (2%)
Frame = +2
Query: 8 FRVSGPKFLKLNKGTWHAGPLF-KADAVDFYNLELSNTNVVDHTT 139
FRV G +F+KL GTWHAGP F + +DFYNLEL++TN+ D T
Sbjct: 62 FRVPGDRFIKLEMGTWHAGPYFDHEEFIDFYNLELADTNLTDRET 106
>ref|ZP_01124588.1| hypothetical protein WH7805_05286 [Synechococcus sp. WH 7805]
gb|EAR18179.1| hypothetical protein WH7805_05286 [Synechococcus sp. WH 7805]
Length = 159
Score = 58.2 bits (139), Expect = 7e-08
Identities = 25/45 (55%), Positives = 33/45 (73%)
Frame = +2
Query: 5 VFRVSGPKFLKLNKGTWHAGPLFKADAVDFYNLELSNTNVVDHTT 139
+ R+ + +KL+ GTWHAGPLF AD+ F+NLELS+TN DH T
Sbjct: 103 LLRIEAGEGIKLHLGTWHAGPLFDADSASFFNLELSDTNQNDHET 147
>gb|ABB26313.1| conserved hypothetical protein [Synechococcus sp. CC9902]
ref|YP_377357.1| hypothetical protein Syncc9902_1349 [Synechococcus sp. CC9902]
Length = 160
Score = 57.0 bits (136), Expect = 1e-07
Identities = 25/48 (52%), Positives = 34/48 (70%)
Frame = +2
Query: 11 RVSGPKFLKLNKGTWHAGPLFKADAVDFYNLELSNTNVVDHTTHHFKK 154
RV + +KL++GTWHAGP F A F+NLELS+TN++DH + KK
Sbjct: 104 RVEPGEAVKLHQGTWHAGPYFVAPTALFFNLELSDTNLIDHNSQPLKK 151
>gb|ABB34302.1| conserved hypothetical protein [Synechococcus sp. CC9605]
ref|YP_380857.1| hypothetical protein Syncc9605_0528 [Synechococcus sp. CC9605]
Length = 171
Score = 43.1 bits (100), Expect = 0.002
Identities = 18/35 (51%), Positives = 23/35 (65%)
Frame = +2
Query: 35 KLNKGTWHAGPLFKADAVDFYNLELSNTNVVDHTT 139
KL+ GTWHAGP + + F+NLEL TN DH +
Sbjct: 125 KLHPGTWHAGPFVQEQSALFFNLELRTTNEDDHNS 159
>emb|CAE07970.1| conserved hypothetical protein [Synechococcus sp. WH 8102]
ref|NP_897548.1| hypothetical protein SYNW1455 [Synechococcus sp. WH 8102]
Length = 171
Score = 42.7 bits (99), Expect = 0.003
Identities = 18/34 (52%), Positives = 22/34 (64%)
Frame = +2
Query: 32 LKLNKGTWHAGPLFKADAVDFYNLELSNTNVVDH 133
+KL+ GTWHAGP + F+NLEL TN DH
Sbjct: 124 VKLHPGTWHAGPFLNTASALFFNLELRTTNEDDH 157
>ref|ZP_01140555.1| multi-domain beta-ketoacyl synthase [Geobacter uraniumreducens Rf4]
gb|EAR37560.1| multi-domain beta-ketoacyl synthase [Geobacter uraniumreducens Rf4]
Length = 2298
Score = 35.0 bits (79), Expect = 0.60
Identities = 23/70 (32%), Positives = 37/70 (52%), Gaps = 1/70 (1%)
Frame = -3
Query: 229 AVLSVVFGLRDVLFLVLHHKC-YPIMFLEMVCGMINNVGVAQFQIIEINGVRLEQRPGMP 53
AV+S + + L V+ K YP+ LEM GM +++G+ + +EI E+ PG
Sbjct: 1300 AVISAGKNVAETLLAVVSEKTGYPVEMLEMEMGMDSDLGIDSIKRVEILSTIQERLPG-- 1357
Query: 52 GPLVQLEKLG 23
P++ E LG
Sbjct: 1358 APVIGPEHLG 1367
Score = 33.5 bits (75), Expect = 1.7
Identities = 20/60 (33%), Positives = 32/60 (53%)
Frame = -3
Query: 202 RDVLFLVLHHKCYPIMFLEMVCGMINNVGVAQFQIIEINGVRLEQRPGMPGPLVQLEKLG 23
R +L +V YP+ LEM GM +++G+ + +EI E+ PG P++ E LG
Sbjct: 1113 RTLLAVVSEKTGYPVEMLEMEMGMDSDLGIDSIKRVEILSAIQERLPG--APVIGPEHLG 1170
Score = 32.0 bits (71), Expect = 5.1
Identities = 19/58 (32%), Positives = 31/58 (53%)
Frame = -3
Query: 196 VLFLVLHHKCYPIMFLEMVCGMINNVGVAQFQIIEINGVRLEQRPGMPGPLVQLEKLG 23
+L +V YP+ LEM GM +++G+ + +EI E+ PG P++ E LG
Sbjct: 1410 LLAVVSEKTGYPVEMLEMEMGMDSDLGIDSIKRVEILSTIQERLPG--APVIGPEHLG 1465
>ref|ZP_00677262.1| Beta-ketoacyl synthase:Acyl transferase domain [Pelobacter
propionicus DSM 2379]
gb|EAO37382.1| Beta-ketoacyl synthase:Acyl transferase domain [Pelobacter
propionicus DSM 2379]
Length = 2297
Score = 33.5 bits (75), Expect = 1.7
Identities = 25/73 (34%), Positives = 36/73 (49%), Gaps = 4/73 (5%)
Frame = -3
Query: 229 AVLSVVFGLRDVLFLVLHHKCYPIMFLEMVCGMINNVGVAQFQIIEINGVRLEQRPGMP- 53
A LS+ R +L ++ YP+ LE GM +++G+ + +EI EQ PG P
Sbjct: 1296 AALSLENVTRTLLAVISEKTGYPVEMLEPDMGMDSDLGIDSIKRVEILSSLQEQLPGAPA 1355
Query: 52 -GP--LVQLEKLG 23
GP L L LG
Sbjct: 1356 IGPEHLATLRTLG 1368
Score = 32.3 bits (72), Expect = 3.9
Identities = 24/73 (32%), Positives = 35/73 (47%), Gaps = 4/73 (5%)
Frame = -3
Query: 229 AVLSVVFGLRDVLFLVLHHKCYPIMFLEMVCGMINNVGVAQFQIIEINGVRLEQRPGMP- 53
A LS+ +L ++ YP+ LE GM +++G+ + +EI EQ PG P
Sbjct: 1397 AALSLENVTHTLLAVISEKTGYPVEMLEPDMGMDSDLGIDSIKRVEILSALQEQLPGAPA 1456
Query: 52 -GP--LVQLEKLG 23
GP L L LG
Sbjct: 1457 IGPEHLATLRTLG 1469
Score = 32.0 bits (71), Expect = 5.1
Identities = 21/64 (32%), Positives = 32/64 (50%), Gaps = 4/64 (6%)
Frame = -3
Query: 202 RDVLFLVLHHKCYPIMFLEMVCGMINNVGVAQFQIIEINGVRLEQRPGMP--GP--LVQL 35
R ++ ++ YP+ LE GM +++G+ + +EI EQ PG P GP L L
Sbjct: 1204 RTLMAVISEKTGYPVEMLEPDMGMDSDLGIDSIKRVEILSALQEQLPGAPAIGPEHLATL 1263
Query: 34 EKLG 23
LG
Sbjct: 1264 RTLG 1267
Score = 31.2 bits (69), Expect = 8.6
Identities = 21/64 (32%), Positives = 32/64 (50%), Gaps = 4/64 (6%)
Frame = -3
Query: 202 RDVLFLVLHHKCYPIMFLEMVCGMINNVGVAQFQIIEINGVRLEQRPGMP--GP--LVQL 35
R ++ ++ YP+ LE GM +++G+ + +EI EQ PG P GP L L
Sbjct: 1107 RTLMAVISEKTGYPVEMLEPDMGMDSDLGIDSIKRVEILSSLQEQLPGAPAIGPEHLATL 1166
Query: 34 EKLG 23
LG
Sbjct: 1167 RTLG 1170
>ref|XP_343466.2| PREDICTED: similar to RIKEN cDNA 1100001A21 [Rattus norvegicus]
Length = 722
Score = 33.1 bits (74), Expect = 2.3
Identities = 15/49 (30%), Positives = 25/49 (51%), Gaps = 4/49 (8%)
Frame = -2
Query: 287 FLHDTL----HVGCSLQTWTRSASGLVSGIRIERCSFFSPPPQMLSHHV 153
FLHD HVGC+++TW+++ L++ E P + L H+
Sbjct: 607 FLHDKAGLSGHVGCTMETWSQTLPALLASCSAESLLSICPEARQLYEHL 655
>dbj|BAE67449.1| phosphoglycolate phosphatase [Xanthomonas oryzae pv. oryzae MAFF
311018]
ref|YP_449723.1| phosphoglycolate phosphatase [Xanthomonas oryzae pv. oryzae MAFF
311018]
Length = 216
Score = 32.7 bits (73), Expect = 3.0
Identities = 22/76 (28%), Positives = 36/76 (47%)
Frame = -3
Query: 232 PAVLSVVFGLRDVLFLVLHHKCYPIMFLEMVCGMINNVGVAQFQIIEINGVRLEQRPGMP 53
P V + GLRD + P F + +++++G+A + G L QR P
Sbjct: 91 PGVAEALAGLRDAGATLALCTNKPSRF---IAPLLDHLGIAAHFSSVLGGDSLPQRKPDP 147
Query: 52 GPLVQLEKLGARNPEH 5
PL+QL + R+P+H
Sbjct: 148 APLLQLARHFQRSPQH 163
>ref|YP_199403.1| phosphoglycolate phosphatase [Xanthomonas oryzae pv. oryzae
KACC10331]
gb|AAW74018.1| phosphoglycolate phosphatase [Xanthomonas oryzae pv. oryzae
KACC10331]
Length = 263
Score = 32.7 bits (73), Expect = 3.0
Identities = 22/76 (28%), Positives = 36/76 (47%)
Frame = -3
Query: 232 PAVLSVVFGLRDVLFLVLHHKCYPIMFLEMVCGMINNVGVAQFQIIEINGVRLEQRPGMP 53
P V + GLRD + P F + +++++G+A + G L QR P
Sbjct: 138 PGVAEALAGLRDAGATLALCTNKPSRF---IAPLLDHLGIAAHFSSVLGGDSLPQRKPDP 194
Query: 52 GPLVQLEKLGARNPEH 5
PL+QL + R+P+H
Sbjct: 195 APLLQLARHFQRSPQH 210
>ref|ZP_00108217.1| COG3321: Polyketide synthase modules and related proteins [Nostoc
punctiforme PCC 73102]
Length = 1809
Score = 31.6 bits (70), Expect = 6.6
Identities = 16/48 (33%), Positives = 26/48 (54%)
Frame = -3
Query: 166 YPIMFLEMVCGMINNVGVAQFQIIEINGVRLEQRPGMPGPLVQLEKLG 23
YP+ LE+ M ++G+ + +EI G E P +P P +E+LG
Sbjct: 1489 YPVEMLELEMDMEADLGIDSIKRVEILGAMQEMYPNLPKP--NIEELG 1534
Score = 31.6 bits (70), Expect = 6.6
Identities = 20/71 (28%), Positives = 35/71 (49%)
Frame = -3
Query: 229 AVLSVVFGLRDVLFLVLHHKCYPIMFLEMVCGMINNVGVAQFQIIEINGVRLEQRPGMPG 50
A + +V +++L + YP+ LEM M ++G+ + +EI G E P +P
Sbjct: 1335 ATIDIVDLDKNLLAITSDKTGYPVEMLEMDMDMEADLGIDSIKRVEILGALQEMYPNLPK 1394
Query: 49 PLVQLEKLGAR 17
P LE+L +
Sbjct: 1395 P--NLEELSEK 1403
>gb|AAQ56484.1| putative transposon protein [Oryza sativa (japonica
cultivar-group)]
Length = 848
Score = 31.2 bits (69), Expect = 8.6
Identities = 15/30 (50%), Positives = 18/30 (60%)
Frame = -2
Query: 329 KARYTSLNKDLRCAFLHDTLHVGCSLQTWT 240
KARY S N+ C L DT+ G + QTWT
Sbjct: 750 KARYKSANEVPNCIVLGDTMAYGGNGQTWT 779
>gb|ABC21421.1| Photosynthetic reaction center, H-chain [Rhodospirillum rubrum ATCC
11170]
ref|YP_425708.1| Photosynthetic reaction center, H-chain [Rhodospirillum rubrum ATCC
11170]
prf||1709158B puh gene
Length = 257
Score = 31.2 bits (69), Expect = 8.6
Identities = 14/28 (50%), Positives = 17/28 (60%)
Frame = +2
Query: 5 VFRVSGPKFLKLNKGTWHAGPLFKADAV 88
VF ++ PK KL G +A P FK DAV
Sbjct: 59 VFSIARPKIFKLKTGATYAAPNFKRDAV 86
Database: nr
Posted date: Apr 6, 2006 2:41 PM
Number of letters in database: 1,185,965,366
Number of sequences in database: 3,454,138
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 964,589,151
Number of Sequences: 3454138
Number of extensions: 19531593
Number of successful extensions: 90259
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 73448
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 90248
length of database: 1,185,965,366
effective HSP length: 114
effective length of database: 792,193,634
effective search space used: 19012647216
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)