BLASTX 2.2.6 [Apr-09-2003]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2493528.2.1
(627 letters)
Database: nr
3,454,138 sequences; 1,185,965,366 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAD61619.1| CDK5 activator-binding protein-like [Oryza ... 331 1e-89
ref|NP_196301.2| unknown protein [Arabidopsis thaliana] 250 3e-65
dbj|BAB09818.1| CDK5 activator-binding protein-like [Arabid... 190 4e-47
gb|AAH81793.1| Cdk5rap3 protein [Rattus norvegicus] 80 7e-14
ref|XP_785908.1| PREDICTED: similar to CDK5 regulatory subu... 80 7e-14
dbj|BAE36596.1| unnamed protein product [Mus musculus] 79 9e-14
dbj|BAE29070.1| unnamed protein product [Mus musculus] >gi|... 79 9e-14
dbj|BAE38797.1| unnamed protein product [Mus musculus] 79 9e-14
ref|XP_537662.2| PREDICTED: similar to CDK5 regulatory subu... 79 1e-13
dbj|BAE32274.1| unnamed protein product [Mus musculus] 79 1e-13
ref|NP_077814.1| CDK5 regulatory subunit associated protein... 79 2e-13
ref|NP_001002105.1| hypothetical protein LOC415195 [Danio r... 79 2e-13
gb|AAG17225.1| CDK5 regulatory subunit associated protein I... 78 2e-13
gb|AAH72435.1| CDK5 regulatory subunit associated protein 3... 78 2e-13
dbj|BAD97107.1| CDK5 regulatory subunit associated protein ... 78 2e-13
gb|AAG39277.1| MSTP016 [Homo sapiens] >gi|60729579|pir||JC7... 78 2e-13
ref|XP_586181.2| PREDICTED: similar to CDK5 regulatory subu... 76 8e-13
ref|NP_001026757.1| CDK5 regulatory subunit associated prot... 76 1e-12
emb|CAH89681.1| hypothetical protein [Pongo pygmaeus] >gi|6... 75 1e-12
emb|CAG00652.1| unnamed protein product [Tetraodon nigrovir... 72 1e-11
gb|AAH88507.1| CDK5 regulatory subunit associated protein 3... 65 2e-09
gb|AAH77996.1| Unknown (protein for MGC:82350) [Xenopus lae... 63 7e-09
ref|XP_511931.1| PREDICTED: hypothetical protein XP_511931 ... 63 7e-09
gb|EAL26481.1| GA15755-PA [Drosophila pseudoobscura] 63 9e-09
ref|NP_726016.1| CG30291-PA [Drosophila melanogaster] >gi|1... 62 2e-08
gb|EAA14226.2| ENSANGP00000015123 [Anopheles gambiae str. P... 57 4e-07
ref|XP_637024.1| hypothetical protein DDB0187607 [Dictyoste... 55 1e-06
ref|XP_514562.1| PREDICTED: similar to CDK5 regulatory subu... 53 9e-06
gb|AAX24395.2| SJCHGC03338 protein [Schistosoma japonicum] 42 0.016
gb|EAR90763.1| hypothetical protein TTHERM_00709760 [Tetrah... 41 0.037
gb|AAB00143.1| putative 40 0.081
ref|XP_214340.3| PREDICTED: similar to mKIAA1901 protein [R... 40 0.081
emb|CAB70720.1| hypothetical protein [Homo sapiens] 39 0.14
ref|NP_057279.2| M-phase phosphoprotein 1 [Homo sapiens] >g... 39 0.14
emb|CAI12886.1| M-phase phosphoprotein 1 [Homo sapiens] >gi... 39 0.14
ref|XP_684324.1| PREDICTED: similar to zinc finger protein ... 39 0.18
gb|AAP40331.1| M-phase phosphoprotein 1 [Homo sapiens] 38 0.24
emb|CAC92509.1| Clp ATPase [Yersinia pestis CO92] >gi|16123... 38 0.24
emb|CAH20088.1| ATP-dependent protease, Hsp 100, part of no... 38 0.24
ref|ZP_00824294.1| COG0542: ATPases with chaperone activity... 38 0.24
ref|ZP_00820808.1| COG0542: ATPases with chaperone activity... 38 0.24
gb|EAS03846.1| hypothetical protein TTHERM_00658900 [Tetrah... 38 0.24
gb|AAB88727.1| M-phase phosphoprotein-1 [Homo sapiens] 38 0.24
gb|AAS60923.1| Clp ATPase [Yersinia pestis biovar Medievali... 38 0.24
emb|CAB55962.1| hypothetical protein [Homo sapiens] 38 0.24
dbj|BAB69456.1| mitotic kinesin-related protein [Homo sapiens] 38 0.24
dbj|BAE73859.1| heat shock protein [Sodalis glossinidius st... 38 0.31
dbj|BAB15043.1| unnamed protein product [Homo sapiens] 37 0.53
ref|ZP_00831746.1| COG0542: ATPases with chaperone activity... 37 0.53
ref|XP_637740.1| myosin II heavy chain [Dictyostelium disco... 37 0.53
sp|P08799|MYS2_DICDI Myosin II heavy chain, non muscle >gi|... 37 0.53
ref|XP_395575.2| PREDICTED: similar to novel protein, parti... 37 0.69
ref|XP_818988.1| hypothetical protein [Trypanosoma cruzi st... 36 0.90
ref|ZP_01073555.1| stage 0 sporulation protein J [Campyloba... 36 1.2
ref|ZP_00827770.1| COG0542: ATPases with chaperone activity... 36 1.2
ref|ZP_00525060.1| DNA mismatch repair protein MutS, C-term... 36 1.2
ref|XP_809838.1| hypothetical protein [Trypanosoma cruzi st... 36 1.2
ref|XP_887627.1| PREDICTED: similar to Pre-B-cell leukemia ... 36 1.2
ref|XP_805164.1| hypothetical protein [Trypanosoma cruzi st... 35 1.5
gb|AAA64514.1| testicular protein 35 1.5
emb|CAD13484.1| Eps-15 protein [Drosophila melanogaster] >g... 35 1.5
ref|NP_611965.2| Eps-15 CG16932-PA, isoform A [Drosophila m... 35 1.5
gb|EAR82385.1| Viral A-type inclusion protein repeat contai... 35 2.0
gb|EAR94768.1| hypothetical protein TTHERM_00673430 [Tetrah... 35 2.0
ref|XP_395017.2| PREDICTED: similar to ENSANGP00000016764 [... 35 2.0
gb|EAO23385.1| 4Fe-4S ferredoxin, iron-sulfur binding:ATP-b... 35 2.0
dbj|BAE22112.1| unnamed protein product [Mus musculus] 35 2.0
ref|ZP_01148511.1| putative oligopeptide ABC transporter (b... 35 2.6
emb|CAE13564.1| heat shock protein F84.1 [Photorhabdus lumi... 35 2.6
ref|XP_758749.1| hypothetical protein UM02602.1 [Ustilago m... 35 2.6
ref|XP_380887.1| hypothetical protein FG00711.1 [Gibberella... 35 2.6
ref|XP_802873.1| hypothetical protein [Trypanosoma cruzi st... 34 3.4
gb|AAH61940.1| MGC68805 protein [Xenopus laevis] 34 3.4
gb|AAT30115.1| HD domain protein [Bacillus anthracis str. '... 34 3.4
gb|AAT62280.1| CMP-binding factor [Bacillus thuringiensis s... 34 3.4
ref|ZP_00236025.1| CMP-binding factor [Bacillus cereus G924... 34 3.4
ref|ZP_01185807.1| nucleic acid binding, OB-fold, tRNA/heli... 34 3.4
emb|CAA42503.1| homeobox protein [Homo sapiens] 34 4.5
emb|CAE83959.1| pre-B-cell leukemia transcription factor 2 ... 34 4.5
gb|AAH87615.1| Pre B-cell leukemia transcription factor 2 [... 34 4.5
emb|CAJ18598.1| Pbx2 [Mus musculus] >gi|2564949|gb|AAB82006... 34 4.5
ref|NP_002577.2| pre-B-cell leukemia transcription factor 2... 34 4.5
ref|XP_874385.1| PREDICTED: similar to Pre-B-cell leukemia ... 34 4.5
ref|XP_588473.2| PREDICTED: similar to Golgi autoantigen, g... 34 4.5
dbj|BAE35238.1| unnamed protein product [Mus musculus] 34 4.5
ref|XP_628300.1| hypothetical protein cgd7_1150 [Cryptospor... 34 4.5
ref|XP_869338.1| PREDICTED: similar to Golgi autoantigen, g... 34 4.5
ref|XP_518378.1| PREDICTED: similar to Pre-B-cell leukemia ... 34 4.5
ref|XP_877778.1| PREDICTED: similar to golgin 97 isoform 3 ... 34 4.5
dbj|BAE24825.1| unnamed protein product [Mus musculus] 34 4.5
ref|XP_807413.1| hypothetical protein [Trypanosoma cruzi st... 34 4.5
ref|XP_861016.1| PREDICTED: similar to Pre-B-cell leukemia ... 34 4.5
emb|CAI17540.1| pre-B-cell leukemia transcription factor 2 ... 34 4.5
emb|CAI41815.1| pre-B-cell leukemia transcription factor 2 ... 34 4.5
ref|XP_668137.1| RAD50 DNA repair protein-related [Cryptosp... 34 4.5
ref|XP_584966.2| PREDICTED: similar to Pre-B-cell leukemia ... 34 4.5
ref|XP_850252.1| PREDICTED: similar to Pre-B-cell leukemia ... 34 4.5
ref|NP_069370.1| hypothetical protein AF0534 [Archaeoglobus... 33 5.8
ref|ZP_01133352.1| putative orphan protein [Pseudoalteromon... 33 5.8
ref|NP_972927.1| ATP-dependent Clp protease, ATP-binding su... 33 5.8
ref|NP_070387.1| chromosome segregation protein (smc1) [Arc... 33 5.8
pir||A64505 P115 homolog - Methanococcus jannaschii 33 5.8
gb|ABC59903.1| hemagglutinin [Influenza A virus (A/sharp-ta... 33 5.8
sp|Q59037|SMC_METJA Chromosome partition protein smc homolo... 33 5.8
emb|CAG76243.1| ClpB protein (heat shock protein f84.1) [Er... 33 7.6
ref|ZP_00800516.1| Dynamin:GTP-binding protein, HSR1-relate... 33 7.6
gb|EAS07367.1| hypothetical protein TTHERM_00568040 [Tetrah... 33 7.6
emb|CAA11228.1| kinesin-related mitotic motor protein [Mus ... 33 7.6
gb|AAH60670.1| Kinesin family member 11 [Mus musculus] >gi|... 33 7.6
dbj|BAD85206.1| chromosome segregation ATPase [Thermococcus... 33 9.9
emb|CAI44475.1| Cytosol-type hsp70 [Paramecium tetraurelia] 33 9.9
gb|AAO77379.1| conserved hypothetical protein [Bacteroides ... 33 9.9
ref|XP_639380.1| hypothetical protein DDB0205012 [Dictyoste... 33 9.9
emb|CAJ19345.1| FIMBRIATA-like protein [Triticum aestivum] 33 9.9
emb|CAC10189.1| Bcs1 protein [Kluyveromyces lactis] 33 9.9
emb|CAH69074.1| novel protein similar to vertebrate protein... 33 9.9
gb|AAM18882.1| unknown [Branchiostoma floridae] 33 9.9
gb|AAA24422.1| ATP-dependent protease binding subunit [Esch... 33 9.9
dbj|BAA16476.1| protein disaggregation chaperone [Escherich... 33 9.9
emb|CAF90604.1| unnamed protein product [Tetraodon nigrovir... 33 9.9
emb|CAA40846.1| analogue of ATP-dependent protease regulato... 33 9.9
ref|XP_873086.1| PREDICTED: similar to hairy and enhancer o... 33 9.9
ref|YP_404365.1| heat shock protein [Shigella dysenteriae S... 33 9.9
gb|AAP17974.1| heat shock protein [Shigella flexneri 2a str... 33 9.9
ref|ZP_00698260.1| COG0542: ATPases with chaperone activity... 33 9.9
dbj|BAC62443.1| putative sensor histidine kinase [Vibrio pa... 33 9.9
ref|XP_768191.1| myosin heavy chain [Giardia lamblia ATCC 5... 33 9.9
gb|AAN81563.1| ClpB protein [Escherichia coli CFT073] >gi|1... 33 9.9
ref|NP_861984.1| rb109 [Ruegeria sp. PR1b] >gi|22726334|gb|... 33 9.9
ref|XP_542946.2| PREDICTED: hypothetical protein XP_542946 ... 33 9.9
dbj|BAA14336.1| hemagglutinin precursor [Influenza A virus ... 33 9.9
ref|XP_887622.1| PREDICTED: similar to Pre-B-cell leukemia ... 33 9.9
gb|AAY85533.1| hemagglutinin [Influenza A virus (A/duck/Yan... 33 9.9
gb|ABB88066.1| hemagglutinin [Influenza A virus (A/mallard/... 33 9.9
dbj|BAC32588.1| unnamed protein product [Mus musculus] >gi|... 33 9.9
gb|AAH39955.1| Transmembrane and coiled-coil domains 3 [Mus... 33 9.9
dbj|BAE28438.1| unnamed protein product [Mus musculus] 33 9.9
ref|XP_225016.3| PREDICTED: similar to RIKEN cDNA B230339H1... 33 9.9
gb|EAR84887.1| Leucine Rich Repeat family protein [Tetrahym... 33 9.9
>dbj|BAD61619.1| CDK5 activator-binding protein-like [Oryza sativa (japonica
cultivar-group)]
Length = 558
Score = 331 bits (848), Expect = 1e-89
Identities = 170/187 (90%), Positives = 184/187 (98%)
Frame = -2
Query: 617 QSQMIAEDRSLLLEKEYRNNILDDLLEVKSFLTQRLGEMRNADTSSLQHQVQAVSPFVLQ 438
QSQ +AE+RS LLEKEYRNNILDDLLEV++FLTQRLGEMRNADTSSLQHQVQAVSPFVLQ
Sbjct: 372 QSQSLAEERSQLLEKEYRNNILDDLLEVRAFLTQRLGEMRNADTSSLQHQVQAVSPFVLQ 431
Query: 437 QHAPDSLENMLVEISSAISLLTNQKTLDLIMILNSKRFLDRLVSSLEEKKHHEVKLREGL 258
Q+AP++LENML E+SSAISLL+NQKTLDLIMILNSKRFLDRLVS+LE+KKHHEVKLREGL
Sbjct: 432 QYAPENLENMLAEVSSAISLLSNQKTLDLIMILNSKRFLDRLVSTLEDKKHHEVKLREGL 491
Query: 257 GDLSVKRMELQNALSSSWPKQEAAITKTRELKKLCESTLSSVFDGRPVYIIGEINTLLSS 78
GDLSVKRMELQNALSSSWPKQEAAITKTRELKKLCE+TLS+VFDGRPV+IIGEINTLLSS
Sbjct: 492 GDLSVKRMELQNALSSSWPKQEAAITKTRELKKLCETTLSTVFDGRPVHIIGEINTLLSS 551
Query: 77 SVSQLAG 57
SVSQLAG
Sbjct: 552 SVSQLAG 558
>ref|NP_196301.2| unknown protein [Arabidopsis thaliana]
Length = 549
Score = 250 bits (638), Expect = 3e-65
Identities = 129/176 (73%), Positives = 153/176 (86%)
Frame = -2
Query: 596 DRSLLLEKEYRNNILDDLLEVKSFLTQRLGEMRNADTSSLQHQVQAVSPFVLQQHAPDSL 417
+RS LLE EYRN ILDDL EVK+FL QRL E+RN DT SLQH VQAVSP VLQQ++P+++
Sbjct: 373 ERSQLLETEYRNKILDDLYEVKAFLNQRLIELRNEDTLSLQHHVQAVSPMVLQQYSPETI 432
Query: 416 ENMLVEISSAISLLTNQKTLDLIMILNSKRFLDRLVSSLEEKKHHEVKLREGLGDLSVKR 237
E M+V+IS AISLLTN+K+ DLIMILNSKRFLDRLVS LEEKKH EVKLRE L D+ +R
Sbjct: 433 EPMVVDISMAISLLTNKKSRDLIMILNSKRFLDRLVSELEEKKHREVKLRESLKDVGRRR 492
Query: 236 MELQNALSSSWPKQEAAITKTRELKKLCESTLSSVFDGRPVYIIGEINTLLSSSVS 69
MELQN+LS+ WPKQEAA++KTRELK+LCE++LSS+FDGRPV I GEINTLL++ VS
Sbjct: 493 MELQNSLSAIWPKQEAALSKTRELKELCETSLSSMFDGRPVNIRGEINTLLNAGVS 548
>dbj|BAB09818.1| CDK5 activator-binding protein-like [Arabidopsis thaliana]
sp|Q9FG23|CK5P3_ARATH CDK5RAP3-like protein
Length = 522
Score = 190 bits (482), Expect = 4e-47
Identities = 98/134 (73%), Positives = 114/134 (85%)
Frame = -2
Query: 596 DRSLLLEKEYRNNILDDLLEVKSFLTQRLGEMRNADTSSLQHQVQAVSPFVLQQHAPDSL 417
+RS LLE EYRN ILDDL EVK+FL QRL E+RN DT SLQH VQAVSP VLQQ++P+++
Sbjct: 384 ERSQLLETEYRNKILDDLYEVKAFLNQRLIELRNEDTLSLQHHVQAVSPMVLQQYSPETI 443
Query: 416 ENMLVEISSAISLLTNQKTLDLIMILNSKRFLDRLVSSLEEKKHHEVKLREGLGDLSVKR 237
E M+V+IS AISLLTN+K+ DLIMILNSKRFLDRLVS LEEKKH EVKLRE L D+ +R
Sbjct: 444 EPMVVDISMAISLLTNKKSRDLIMILNSKRFLDRLVSELEEKKHREVKLRESLKDVGRRR 503
Query: 236 MELQNALSSSWPKQ 195
MELQN+LS+ WPKQ
Sbjct: 504 MELQNSLSAIWPKQ 517
>gb|AAH81793.1| Cdk5rap3 protein [Rattus norvegicus]
Length = 504
Score = 79.7 bits (195), Expect = 7e-14
Identities = 54/164 (32%), Positives = 91/164 (55%), Gaps = 1/164 (0%)
Frame = -2
Query: 590 SLLLEKEYRNNILDDLLEVKSFLTQRLGEM-RNADTSSLQHQVQAVSPFVLQQHAPDSLE 414
+LL E RN +D+L+E++ FL+QR EM AD S+ Q Q ++P +LQ + +
Sbjct: 340 TLLEYPETRNQFIDELMELEIFLSQRAVEMSEEADILSVS-QFQ-LAPAILQGQTKEKML 397
Query: 413 NMLVEISSAISLLTNQKTLDLIMILNSKRFLDRLVSSLEEKKHHEVKLREGLGDLSVKRM 234
+++ + I LT+ + L MIL S R++DR+ L++K L + K+
Sbjct: 398 SLVSTLQHLIGQLTSLRMQHLFMILASPRYVDRVTELLQQKLKQSQLLALKKDLMVEKQQ 457
Query: 233 ELQNALSSSWPKQEAAITKTRELKKLCESTLSSVFDGRPVYIIG 102
E ++ PK + + KTREL+KL E+ +S ++GRPV ++G
Sbjct: 458 EALQEQAALEPKLDLLLEKTRELQKLIEADISKRYNGRPVNLMG 501
>ref|XP_785908.1| PREDICTED: similar to CDK5 regulatory subunit associated protein 3
[Strongylocentrotus purpuratus]
Length = 502
Score = 79.7 bits (195), Expect = 7e-14
Identities = 47/160 (29%), Positives = 84/160 (52%)
Frame = -2
Query: 566 RNNILDDLLEVKSFLTQRLGEMRNADTSSLQHQVQAVSPFVLQQHAPDSLENMLVEISSA 387
RN ++++LE+++FL QR EM DT L +P V++ + ML ++
Sbjct: 344 RNQFINEVLELQAFLGQRKVEMEG-DTDVLTFNQFQTAPTVVKTKTLHYITTMLAQVDEI 402
Query: 386 ISLLTNQKTLDLIMILNSKRFLDRLVSSLEEKKHHEVKLREGLGDLSVKRMELQNALSSS 207
+ LT + L +++ S +++DRL SL++K E K+ + KR++ +
Sbjct: 403 YNRLTETRMQHLFLLIGSPKYVDRLADSLKQKVSLEEKMLASREAVKQKRLDCLEDQTKL 462
Query: 206 WPKQEAAITKTRELKKLCESTLSSVFDGRPVYIIGEINTL 87
P+ +A + +TREL+K +S + RPV ++G INTL
Sbjct: 463 EPRVDALVGRTRELQKQIAGDISKRYKNRPVNLMGAINTL 502
>dbj|BAE36596.1| unnamed protein product [Mus musculus]
Length = 487
Score = 79.3 bits (194), Expect = 9e-14
Identities = 54/164 (32%), Positives = 90/164 (54%), Gaps = 1/164 (0%)
Frame = -2
Query: 590 SLLLEKEYRNNILDDLLEVKSFLTQRLGEM-RNADTSSLQHQVQAVSPFVLQQHAPDSLE 414
+LL E RN +D+L+E++ FL+QR EM AD S+ Q Q ++P +LQ + +
Sbjct: 323 TLLEYPETRNQFIDELMELEIFLSQRAVEMSEEADILSVS-QFQ-LAPAILQGQTKEKML 380
Query: 413 NMLVEISSAISLLTNQKTLDLIMILNSKRFLDRLVSSLEEKKHHEVKLREGLGDLSVKRM 234
+++ + I LT+ + L MIL S R++DR+ L++K L + K+
Sbjct: 381 SLVSTLQQLIGRLTSLRMQHLFMILASPRYVDRVTEFLQQKLKQSQLLALKKELMVEKQQ 440
Query: 233 ELQNALSSSWPKQEAAITKTRELKKLCESTLSSVFDGRPVYIIG 102
E ++ PK + + KTREL+KL E+ +S + GRPV ++G
Sbjct: 441 EALQEQAALEPKLDLLLEKTRELQKLIEADISKRYSGRPVNLMG 484
>dbj|BAE29070.1| unnamed protein product [Mus musculus]
dbj|BAC37034.1| unnamed protein product [Mus musculus]
dbj|BAC35961.1| unnamed protein product [Mus musculus]
dbj|BAC35945.1| unnamed protein product [Mus musculus]
gb|AAH02318.1| CDK5 regulatory subunit associated protein 3 [Mus musculus]
sp|Q99LM2|CK5P3_MOUSE CDK5 regulatory subunit-associated protein 3
ref|NP_084524.1| CDK5 regulatory subunit associated protein 3 [Mus musculus]
Length = 503
Score = 79.3 bits (194), Expect = 9e-14
Identities = 54/164 (32%), Positives = 90/164 (54%), Gaps = 1/164 (0%)
Frame = -2
Query: 590 SLLLEKEYRNNILDDLLEVKSFLTQRLGEM-RNADTSSLQHQVQAVSPFVLQQHAPDSLE 414
+LL E RN +D+L+E++ FL+QR EM AD S+ Q Q ++P +LQ + +
Sbjct: 339 TLLEYPETRNQFIDELMELEIFLSQRAVEMSEEADILSVS-QFQ-LAPAILQGQTKEKML 396
Query: 413 NMLVEISSAISLLTNQKTLDLIMILNSKRFLDRLVSSLEEKKHHEVKLREGLGDLSVKRM 234
+++ + I LT+ + L MIL S R++DR+ L++K L + K+
Sbjct: 397 SLVSTLQQLIGRLTSLRMQHLFMILASPRYVDRVTEFLQQKLKQSQLLALKKELMVEKQQ 456
Query: 233 ELQNALSSSWPKQEAAITKTRELKKLCESTLSSVFDGRPVYIIG 102
E ++ PK + + KTREL+KL E+ +S + GRPV ++G
Sbjct: 457 EALQEQAALEPKLDLLLEKTRELQKLIEADISKRYSGRPVNLMG 500
>dbj|BAE38797.1| unnamed protein product [Mus musculus]
Length = 503
Score = 79.3 bits (194), Expect = 9e-14
Identities = 54/164 (32%), Positives = 90/164 (54%), Gaps = 1/164 (0%)
Frame = -2
Query: 590 SLLLEKEYRNNILDDLLEVKSFLTQRLGEM-RNADTSSLQHQVQAVSPFVLQQHAPDSLE 414
+LL E RN +D+L+E++ FL+QR EM AD S+ Q Q ++P +LQ + +
Sbjct: 339 TLLEYPETRNQFIDELMELEIFLSQRAVEMSEEADILSVS-QFQ-LAPAILQGQTKEKML 396
Query: 413 NMLVEISSAISLLTNQKTLDLIMILNSKRFLDRLVSSLEEKKHHEVKLREGLGDLSVKRM 234
+++ + I LT+ + L MIL S R++DR+ L++K L + K+
Sbjct: 397 SLVSTLQQLIGRLTSLRMQHLFMILASPRYVDRVTEFLQQKLKQSQLLALKKELMVEKQQ 456
Query: 233 ELQNALSSSWPKQEAAITKTRELKKLCESTLSSVFDGRPVYIIG 102
E ++ PK + + KTREL+KL E+ +S + GRPV ++G
Sbjct: 457 EALQEQAALEPKLDLLLEKTRELQKLIEADISKRYSGRPVNLMG 500
>ref|XP_537662.2| PREDICTED: similar to CDK5 regulatory subunit associated protein 3
isoform b [Canis familiaris]
Length = 649
Score = 79.0 bits (193), Expect = 1e-13
Identities = 54/164 (32%), Positives = 89/164 (54%), Gaps = 1/164 (0%)
Frame = -2
Query: 590 SLLLEKEYRNNILDDLLEVKSFLTQRLGEM-RNADTSSLQHQVQAVSPFVLQQHAPDSLE 414
+LL E RN +D+L+E++ FL+QR EM AD S+ Q Q ++P +LQ + +
Sbjct: 485 TLLEYPETRNQFIDELMELEIFLSQRAVEMSEEADILSVS-QFQ-LAPAILQGQTKEKMV 542
Query: 413 NMLVEISSAISLLTNQKTLDLIMILNSKRFLDRLVSSLEEKKHHEVKLREGLGDLSVKRM 234
M+ + I LT+ + L MIL S R++DR+ L++K L + K+
Sbjct: 543 TMVSTLQDLIGRLTSLRMQHLFMILASPRYVDRVTGFLQQKLKQSQLLALKKELMVQKQQ 602
Query: 233 ELQNALSSSWPKQEAAITKTRELKKLCESTLSSVFDGRPVYIIG 102
E ++ PK + + KT+EL+KL E+ +S + GRPV ++G
Sbjct: 603 EALQEQAALEPKLDLLLEKTKELQKLIEADISKRYGGRPVNLMG 646
>dbj|BAE32274.1| unnamed protein product [Mus musculus]
Length = 503
Score = 79.0 bits (193), Expect = 1e-13
Identities = 54/164 (32%), Positives = 90/164 (54%), Gaps = 1/164 (0%)
Frame = -2
Query: 590 SLLLEKEYRNNILDDLLEVKSFLTQRLGEM-RNADTSSLQHQVQAVSPFVLQQHAPDSLE 414
+LL E RN +D+L+E++ FL+QR EM AD S+ Q Q ++P +LQ + +
Sbjct: 339 TLLEYPETRNQFIDELMELEIFLSQRAVEMSEEADILSVS-QFQ-LAPAILQGQTKEKML 396
Query: 413 NMLVEISSAISLLTNQKTLDLIMILNSKRFLDRLVSSLEEKKHHEVKLREGLGDLSVKRM 234
+++ + I LT+ + L MIL S R++DR+ L++K L + K+
Sbjct: 397 SLVSMLQQLIGRLTSLRMQHLFMILASPRYVDRVTEFLQQKLKQSQLLALKKELMVEKQQ 456
Query: 233 ELQNALSSSWPKQEAAITKTRELKKLCESTLSSVFDGRPVYIIG 102
E ++ PK + + KTREL+KL E+ +S + GRPV ++G
Sbjct: 457 EALQEQAALEPKLDLLLEKTRELQKLIEADISKRYSGRPVNLMG 500
>ref|NP_077814.1| CDK5 regulatory subunit associated protein 3 [Rattus norvegicus]
gb|AAF60222.1| CDK5 activator-binding protein [Rattus norvegicus]
sp|Q9JLH7|CK5P3_RAT CDK5 regulatory subunit-associated protein 3 (CDK5
activator-binding protein C53)
Length = 504
Score = 78.6 bits (192), Expect = 2e-13
Identities = 54/164 (32%), Positives = 90/164 (54%), Gaps = 1/164 (0%)
Frame = -2
Query: 590 SLLLEKEYRNNILDDLLEVKSFLTQRLGEM-RNADTSSLQHQVQAVSPFVLQQHAPDSLE 414
+LL E RN +D+L+E++ FL+QR EM AD S+ Q Q ++P +LQ + +
Sbjct: 340 TLLEYPETRNQFIDELMELEIFLSQRAVEMSEEADILSVS-QFQ-LAPAILQGQTKEKML 397
Query: 413 NMLVEISSAISLLTNQKTLDLIMILNSKRFLDRLVSSLEEKKHHEVKLREGLGDLSVKRM 234
+++ + I LT+ L MIL S R++DR+ L++K L + K+
Sbjct: 398 SLVSTLQHLIGQLTSLDLQHLFMILASPRYVDRVTELLQQKLKQSQLLALKKDLMVEKQQ 457
Query: 233 ELQNALSSSWPKQEAAITKTRELKKLCESTLSSVFDGRPVYIIG 102
E ++ PK + + KTREL+KL E+ +S ++GRPV ++G
Sbjct: 458 EALQEQAALEPKLDLLLEKTRELQKLIEADISKRYNGRPVNLMG 501
>ref|NP_001002105.1| hypothetical protein LOC415195 [Danio rerio]
gb|AAH71504.1| Zgc:86863 [Danio rerio]
Length = 507
Score = 78.6 bits (192), Expect = 2e-13
Identities = 49/163 (30%), Positives = 86/163 (52%)
Frame = -2
Query: 590 SLLLEKEYRNNILDDLLEVKSFLTQRLGEMRNADTSSLQHQVQAVSPFVLQQHAPDSLEN 411
SLL + R+ +++L E++ FL QRL EMR Q Q ++P V+Q P ++
Sbjct: 343 SLLENSQTRSQFINELKELEMFLCQRLSEMREEGDLVAMSQFQ-LAPSVIQAQTPQRVQV 401
Query: 410 MLVEISSAISLLTNQKTLDLIMILNSKRFLDRLVSSLEEKKHHEVKLREGLGDLSVKRME 231
ML ++ ++ LT+ + L MI S R+++R+ L +K + G L+ KR E
Sbjct: 402 MLADVRELLNGLTSVRMQHLFMIQASPRYVERVSELLRQKLKQADIMVLKRGTLAEKRQE 461
Query: 230 LQNALSSSWPKQEAAITKTRELKKLCESTLSSVFDGRPVYIIG 102
+ P+ + +T+EL+KL E+ +S ++ RPV ++G
Sbjct: 462 ALEEQAKLEPRIDLLAARTKELQKLIEADISKRYNNRPVNLMG 504
>gb|AAG17225.1| CDK5 regulatory subunit associated protein IC53-2 [Homo sapiens]
Length = 281
Score = 78.2 bits (191), Expect = 2e-13
Identities = 54/164 (32%), Positives = 88/164 (53%), Gaps = 1/164 (0%)
Frame = -2
Query: 590 SLLLEKEYRNNILDDLLEVKSFLTQRLGEM-RNADTSSLQHQVQAVSPFVLQQHAPDSLE 414
+LL E RN LD+L+E++ FL QR E+ AD S+ Q Q ++P +LQ + +
Sbjct: 117 TLLEYTETRNQFLDELMELEIFLAQRAVELSEEADVLSVS-QFQ-LAPAILQGQTKEKMV 174
Query: 413 NMLVEISSAISLLTNQKTLDLIMILNSKRFLDRLVSSLEEKKHHEVKLREGLGDLSVKRM 234
M+ + I LT+ + L MIL S R++DR+ L++K L + K+
Sbjct: 175 TMVSVLEDLIGKLTSLQLQHLFMILASPRYVDRVTEFLQQKLKQSQLLALKKELMVQKQQ 234
Query: 233 ELQNALSSSWPKQEAAITKTRELKKLCESTLSSVFDGRPVYIIG 102
E ++ PK + + KT+EL+KL E+ +S + GRPV ++G
Sbjct: 235 EALEEQAALEPKLDLLLEKTKELQKLIEADISKRYSGRPVNLMG 278
>gb|AAH72435.1| CDK5 regulatory subunit associated protein 3, isoform b [Homo
sapiens]
dbj|BAB14657.1| unnamed protein product [Homo sapiens]
ref|NP_788276.1| CDK5 regulatory subunit associated protein 3 isoform b [Homo
sapiens]
gb|AAH09957.1| CDK5 regulatory subunit associated protein 3, isoform b [Homo
sapiens]
sp|Q96JB5|CK5P3_HUMAN CDK5 regulatory subunit-associated protein 3 (CDK5
activator-binding protein C53) (HSF-27 protein)
dbj|BAB93496.1| highly similar to Rattus norvegicus clone C53 CDK5
activator-binding protein [Homo sapiens]
Length = 506
Score = 78.2 bits (191), Expect = 2e-13
Identities = 54/164 (32%), Positives = 88/164 (53%), Gaps = 1/164 (0%)
Frame = -2
Query: 590 SLLLEKEYRNNILDDLLEVKSFLTQRLGEM-RNADTSSLQHQVQAVSPFVLQQHAPDSLE 414
+LL E RN LD+L+E++ FL QR E+ AD S+ Q Q ++P +LQ + +
Sbjct: 342 TLLEYTETRNQFLDELMELEIFLAQRAVELSEEADVLSVS-QFQ-LAPAILQGQTKEKMV 399
Query: 413 NMLVEISSAISLLTNQKTLDLIMILNSKRFLDRLVSSLEEKKHHEVKLREGLGDLSVKRM 234
M+ + I LT+ + L MIL S R++DR+ L++K L + K+
Sbjct: 400 TMVSVLEDLIGKLTSLQLQHLFMILASPRYVDRVTEFLQQKLKQSQLLALKKELMVQKQQ 459
Query: 233 ELQNALSSSWPKQEAAITKTRELKKLCESTLSSVFDGRPVYIIG 102
E ++ PK + + KT+EL+KL E+ +S + GRPV ++G
Sbjct: 460 EALEEQAALEPKLDLLLEKTKELQKLIEADISKRYSGRPVNLMG 503
>dbj|BAD97107.1| CDK5 regulatory subunit associated protein 3 isoform b variant
[Homo sapiens]
Length = 506
Score = 78.2 bits (191), Expect = 2e-13
Identities = 54/164 (32%), Positives = 88/164 (53%), Gaps = 1/164 (0%)
Frame = -2
Query: 590 SLLLEKEYRNNILDDLLEVKSFLTQRLGEM-RNADTSSLQHQVQAVSPFVLQQHAPDSLE 414
+LL E RN LD+L+E++ FL QR E+ AD S+ Q Q ++P +LQ + +
Sbjct: 342 TLLEYTETRNQFLDELMELEIFLAQRAVELSEEADVLSVS-QFQ-LAPAILQGQTKEKMV 399
Query: 413 NMLVEISSAISLLTNQKTLDLIMILNSKRFLDRLVSSLEEKKHHEVKLREGLGDLSVKRM 234
M+ + I LT+ + L MIL S R++DR+ L++K L + K+
Sbjct: 400 TMVSVLEDLIGKLTSLQLQHLFMILASPRYVDRVTEFLQQKLKESQLLALKKELMVQKQQ 459
Query: 233 ELQNALSSSWPKQEAAITKTRELKKLCESTLSSVFDGRPVYIIG 102
E ++ PK + + KT+EL+KL E+ +S + GRPV ++G
Sbjct: 460 EALEEQAALEPKLDLLLEKTKELQKLIEADISKRYSGRPVNLMG 503
>gb|AAG39277.1| MSTP016 [Homo sapiens]
pir||JC7863 IC53 protein - human
Length = 419
Score = 78.2 bits (191), Expect = 2e-13
Identities = 54/164 (32%), Positives = 88/164 (53%), Gaps = 1/164 (0%)
Frame = -2
Query: 590 SLLLEKEYRNNILDDLLEVKSFLTQRLGEM-RNADTSSLQHQVQAVSPFVLQQHAPDSLE 414
+LL E RN LD+L+E++ FL QR E+ AD S+ Q Q ++P +LQ + +
Sbjct: 255 TLLEYTETRNQFLDELMELEIFLAQRAVELSEEADVLSVS-QFQ-LAPAILQGQTKEKMV 312
Query: 413 NMLVEISSAISLLTNQKTLDLIMILNSKRFLDRLVSSLEEKKHHEVKLREGLGDLSVKRM 234
M+ + I LT+ + L MIL S R++DR+ L++K L + K+
Sbjct: 313 TMVSVLEDLIGKLTSLQLQHLFMILASPRYVDRVTEFLQQKLKQSQLLALKKELMVQKQQ 372
Query: 233 ELQNALSSSWPKQEAAITKTRELKKLCESTLSSVFDGRPVYIIG 102
E ++ PK + + KT+EL+KL E+ +S + GRPV ++G
Sbjct: 373 EALEEQAALEPKLDLLLEKTKELQKLIEADISKRYSGRPVNLMG 416
>ref|XP_586181.2| PREDICTED: similar to CDK5 regulatory subunit associated protein 3
isoform b, partial [Bos taurus]
Length = 566
Score = 76.3 bits (186), Expect = 8e-13
Identities = 54/164 (32%), Positives = 88/164 (53%), Gaps = 1/164 (0%)
Frame = -2
Query: 590 SLLLEKEYRNNILDDLLEVKSFLTQRLGEM-RNADTSSLQHQVQAVSPFVLQQHAPDSLE 414
+LL E RN +D+L+E++ FL+QR EM AD S+ Q Q ++P +LQ +
Sbjct: 402 TLLEYPETRNQFIDELMELEIFLSQRAVEMSEEADILSVS-QFQ-LAPAILQGQTKAKMV 459
Query: 413 NMLVEISSAISLLTNQKTLDLIMILNSKRFLDRLVSSLEEKKHHEVKLREGLGDLSVKRM 234
M+ + I LT+ + L MIL S R++DR+ L++K L + K+
Sbjct: 460 AMVSALQDLIGRLTSLRMQHLFMILASPRYVDRVTELLQQKLKQSQLLALKKELMVQKQQ 519
Query: 233 ELQNALSSSWPKQEAAITKTRELKKLCESTLSSVFDGRPVYIIG 102
E + PK + + KT+EL+KL E+ +S ++GRPV ++G
Sbjct: 520 EALQEQAVLEPKLDLLLEKTKELQKLIEADISKRYNGRPVNLMG 563
>ref|NP_001026757.1| CDK5 regulatory subunit associated protein 3 [Gallus gallus]
emb|CAH65266.1| hypothetical protein [Gallus gallus]
Length = 511
Score = 75.9 bits (185), Expect = 1e-12
Identities = 51/163 (31%), Positives = 83/163 (50%)
Frame = -2
Query: 590 SLLLEKEYRNNILDDLLEVKSFLTQRLGEMRNADTSSLQHQVQAVSPFVLQQHAPDSLEN 411
+LL RN +D+L+E++ FL QRL EM Q Q ++P VLQ +
Sbjct: 347 TLLENAATRNQFIDELMELELFLAQRLVEMEEEADVLAASQFQ-LAPAVLQGQTSTRVGT 405
Query: 410 MLVEISSAISLLTNQKTLDLIMILNSKRFLDRLVSSLEEKKHHEVKLREGLGDLSVKRME 231
+L + + L+ ++ L +IL S R++DR+ L++K + L LS KR E
Sbjct: 406 LLANTRALLDQLSTRRMQHLFIILASPRYVDRVSEMLQQKLNQAELLLAKREALSRKRHE 465
Query: 230 LQNALSSSWPKQEAAITKTRELKKLCESTLSSVFDGRPVYIIG 102
PK + +TREL++L E+ +S + GRPV+++G
Sbjct: 466 ALTEQGVLEPKLDRLQERTRELQQLIEADISKRYGGRPVHLMG 508
>emb|CAH89681.1| hypothetical protein [Pongo pygmaeus]
sp|Q5REX6|CK5P3_PONPY CDK5 regulatory subunit-associated protein 3
Length = 506
Score = 75.5 bits (184), Expect = 1e-12
Identities = 53/164 (32%), Positives = 87/164 (53%), Gaps = 1/164 (0%)
Frame = -2
Query: 590 SLLLEKEYRNNILDDLLEVKSFLTQRLGEM-RNADTSSLQHQVQAVSPFVLQQHAPDSLE 414
+LL E RN LD+L+E++ FL +R E+ AD S+ Q Q ++P +LQ +
Sbjct: 342 TLLEYTETRNQFLDELMELEIFLARRAVELSEEADVLSVS-QFQ-LAPAILQGQTKEKTV 399
Query: 413 NMLVEISSAISLLTNQKTLDLIMILNSKRFLDRLVSSLEEKKHHEVKLREGLGDLSVKRM 234
M+ + I LT+ + L MIL S R++DR+ L++K L + K+
Sbjct: 400 TMVSVLEDLIGKLTSLQLQHLFMILASPRYVDRVTEFLQQKLKQSQLLALKKELMVQKQQ 459
Query: 233 ELQNALSSSWPKQEAAITKTRELKKLCESTLSSVFDGRPVYIIG 102
E ++ PK + + KT+EL+KL E+ +S + GRPV ++G
Sbjct: 460 EALEEQAALEPKLDLLLEKTKELQKLIEADISKRYSGRPVNLMG 503
>emb|CAG00652.1| unnamed protein product [Tetraodon nigroviridis]
Length = 505
Score = 72.4 bits (176), Expect = 1e-11
Identities = 51/168 (30%), Positives = 89/168 (52%), Gaps = 2/168 (1%)
Frame = -2
Query: 599 EDRSLLLEKEY-RNNILDDLLEVKSFLTQRLGEMRNADTSSLQHQVQAVSPFVLQQHAPD 423
ED +LEK R+ +D+L+E+++FL QRL EM Q Q ++P ++Q + +
Sbjct: 337 EDALTVLEKPTSRSQFIDELMELEAFLRQRLSEMGEEGDVIAMSQFQ-LAPPIIQDQSCE 395
Query: 422 SLENMLVEISSAISLLTNQKTLDLIMILNSKRFLDRLVSSLEEK-KHHEVKLREGLGDLS 246
+ ML E+ + LT+ + L MI S R+++R+ L +K K ++ + +G +
Sbjct: 396 KVRQMLSEVRDILGRLTSLQMQQLFMIQASPRYVERVSDVLRQKMKQADILVVKG-ARMI 454
Query: 245 VKRMELQNALSSSWPKQEAAITKTRELKKLCESTLSSVFDGRPVYIIG 102
KR E + P+ + TREL+KL E+ +S + RPV ++G
Sbjct: 455 EKRQEALEEQARLEPRIDLLAGHTRELQKLIEADISKRYSKRPVNLMG 502
>gb|AAH88507.1| CDK5 regulatory subunit associated protein 3 [Xenopus tropicalis]
ref|NP_001011442.1| CDK5 regulatory subunit associated protein 3 [Xenopus tropicalis]
Length = 506
Score = 64.7 bits (156), Expect = 2e-09
Identities = 48/164 (29%), Positives = 83/164 (50%), Gaps = 1/164 (0%)
Frame = -2
Query: 590 SLLLEKEYRNNILDDLLEVKSFLTQRLGEMRNADTSSLQHQVQAVSPFVLQQHAPDSLEN 411
S+L + RN +D+L+E++ FL Q M + DT + +P +LQ + +
Sbjct: 342 SVLENTDTRNQFVDELMELELFLCQWQQSM-DCDTDIVTVTQFQTAPSILQAQTQEKVLA 400
Query: 410 MLVEISSAISLLTNQKTLDLIMILNSKRFLDRLVSSLEEKKHHEVKLREGLGDLSVKR-M 234
ML + I+ LT+ + L +IL S R++DR+ L ++ + +L E + V+R
Sbjct: 401 MLSVVRGLINRLTDTRMRQLFLILASPRYVDRVTDHLRQRLR-QAQLLERKSESWVERGR 459
Query: 233 ELQNALSSSWPKQEAAITKTRELKKLCESTLSSVFDGRPVYIIG 102
Q S P+ ++RELKK ++ LS ++ RPV +IG
Sbjct: 460 AAQEERQSLEPRLSLLQERSRELKKQIKADLSKRYNNRPVNLIG 503
>gb|AAH77996.1| Unknown (protein for MGC:82350) [Xenopus laevis]
Length = 508
Score = 63.2 bits (152), Expect = 7e-09
Identities = 46/163 (28%), Positives = 76/163 (46%)
Frame = -2
Query: 590 SLLLEKEYRNNILDDLLEVKSFLTQRLGEMRNADTSSLQHQVQAVSPFVLQQHAPDSLEN 411
S+L + RN +D+L+E++ FL Q M DT + +P +LQ +
Sbjct: 344 SVLENTDTRNQFVDELMELELFLCQWQQSME-CDTDIVTVTQFQTAPSILQGQTQGKVLA 402
Query: 410 MLVEISSAISLLTNQKTLDLIMILNSKRFLDRLVSSLEEKKHHEVKLREGLGDLSVKRME 231
M+ + IS LT+ + L +IL S R++DR+ L ++ L + +
Sbjct: 403 MISVVRGLISRLTDTRMRQLFLILASPRYVDRVTDHLGQRLRQAQLLEKKSVSWVERGRA 462
Query: 230 LQNALSSSWPKQEAAITKTRELKKLCESTLSSVFDGRPVYIIG 102
Q S P+ ++RELKK E+ LS ++ RPV +IG
Sbjct: 463 AQEERQSLEPRLSLLQERSRELKKQIEADLSKRYNNRPVNLIG 505
>ref|XP_511931.1| PREDICTED: hypothetical protein XP_511931 [Pan troglodytes]
Length = 570
Score = 63.2 bits (152), Expect = 7e-09
Identities = 47/146 (32%), Positives = 76/146 (52%), Gaps = 1/146 (0%)
Frame = -2
Query: 590 SLLLEKEYRNNILDDLLEVKSFLTQRLGEM-RNADTSSLQHQVQAVSPFVLQQHAPDSLE 414
+LL E RN LD+L+E++ FL QR E+ AD S+ Q Q ++P +LQ + +
Sbjct: 338 TLLEYTETRNQFLDELMELEIFLAQRAVELSEEADVLSVS-QFQ-LAPAILQGQTKEKMV 395
Query: 413 NMLVEISSAISLLTNQKTLDLIMILNSKRFLDRLVSSLEEKKHHEVKLREGLGDLSVKRM 234
M+ + I LT+ + L MIL S R++DR+ L++K L + K+
Sbjct: 396 TMVSVLEDLIGKLTSLQLQHLFMILASPRYVDRVTEFLQQKLKQSQLLALKKELMVQKQQ 455
Query: 233 ELQNALSSSWPKQEAAITKTRELKKL 156
E ++ PK + + KT+EL+KL
Sbjct: 456 EALEEQAALEPKLDLLLEKTKELQKL 481
>gb|EAL26481.1| GA15755-PA [Drosophila pseudoobscura]
Length = 511
Score = 62.8 bits (151), Expect = 9e-09
Identities = 45/166 (27%), Positives = 79/166 (47%)
Frame = -2
Query: 590 SLLLEKEYRNNILDDLLEVKSFLTQRLGEMRNADTSSLQHQVQAVSPFVLQQHAPDSLEN 411
+LL YR+ LD+L E++SFL RL E+ ++SS + + H DS++
Sbjct: 349 TLLDSPNYRDRFLDELFELESFLRLRLYELNQLESSS---NIMYSLMDSIATHDADSIKK 405
Query: 410 MLVEISSAISLLTNQKTLDLIMILNSKRFLDRLVSSLEEKKHHEVKLREGLGDLSVKRME 231
+L I I ++++T L + +S ++ + L + L++ KLR L + +E
Sbjct: 406 ILGYIEKIIQQTSDEQTRHLFQLKHSSKYANLLATKLQQMTKAVEKLRSTREGLKQRAVE 465
Query: 230 LQNALSSSWPKQEAAITKTRELKKLCESTLSSVFDGRPVYIIGEIN 93
L+ P E I +TR L+ E +S + R V ++G N
Sbjct: 466 LREQRLQLNPVLEELIAQTRTLQTHIEKDISKRYKNRMVNLMGGAN 511
>ref|NP_726016.1| CG30291-PA [Drosophila melanogaster]
gb|AAL28291.1| GH19637p [Drosophila melanogaster]
gb|AAM68189.1| CG30291-PA [Drosophila melanogaster]
sp|Q95SK3|CK5P3_DROME CDK5RAP3-like protein
Length = 509
Score = 61.6 bits (148), Expect = 2e-08
Identities = 42/166 (25%), Positives = 80/166 (48%)
Frame = -2
Query: 590 SLLLEKEYRNNILDDLLEVKSFLTQRLGEMRNADTSSLQHQVQAVSPFVLQQHAPDSLEN 411
+LL YR+ LD++ E++SFL R+ E++ ++SS + + H +S+
Sbjct: 347 TLLDSPNYRDRFLDEIYELESFLRMRIYELKQLESSS---DIMFSLMDNIATHDGESIWK 403
Query: 410 MLVEISSAISLLTNQKTLDLIMILNSKRFLDRLVSSLEEKKHHEVKLREGLGDLSVKRME 231
+LV + I ++++T L + +S ++ + L + L++ KLR L +E
Sbjct: 404 ILVSVEKIIQQTSDKQTQHLFQLKHSPKYANMLATKLQQMTKAVEKLRATREALKQLTIE 463
Query: 230 LQNALSSSWPKQEAAITKTRELKKLCESTLSSVFDGRPVYIIGEIN 93
L+ P E I +TR L+ E +S + R V ++G +N
Sbjct: 464 LREQRQDLNPVLEELIAQTRTLQSHIEKDISKRYKNRVVNLMGGVN 509
>gb|EAA14226.2| ENSANGP00000015123 [Anopheles gambiae str. PEST]
ref|XP_318917.2| ENSANGP00000015123 [Anopheles gambiae str. PEST]
Length = 509
Score = 57.4 bits (137), Expect = 4e-07
Identities = 42/164 (25%), Positives = 84/164 (51%), Gaps = 1/164 (0%)
Frame = -2
Query: 590 SLLLEKEYRNNILDDLLEVKSFLTQRLGEMRNADTSSLQHQVQAVSPF-VLQQHAPDSLE 414
++L ++YR+ ++DLLE++SFL RL ++ +AD + QV A + + H ++
Sbjct: 348 TVLDAQQYRDRFVNDLLELQSFLKMRLHQLGSADKA----QVLAFAIMDNFKDHDEKTVA 403
Query: 413 NMLVEISSAISLLTNQKTLDLIMILNSKRFLDRLVSSLEEKKHHEVKLREGLGDLSVKRM 234
+ML E+ + +T++ L+ I +S ++D L S++++K K++E K +
Sbjct: 404 SMLAEVEVVYAGVTDELLQHLLQIKHSPVYVDILTSNVKQKLTSIDKMKETALMKREKSV 463
Query: 233 ELQNALSSSWPKQEAAITKTRELKKLCESTLSSVFDGRPVYIIG 102
+ P Q + +T+ L+ E +S + RPV + G
Sbjct: 464 SFKQQSVELKPTQTKIVEQTKTLQGQIEKDISKRYKNRPVNLYG 507
>ref|XP_637024.1| hypothetical protein DDB0187607 [Dictyostelium discoideum]
gb|EAL63519.1| hypothetical protein DDB0187607 [Dictyostelium discoideum]
Length = 541
Score = 55.5 bits (132), Expect = 1e-06
Identities = 44/168 (26%), Positives = 83/168 (49%), Gaps = 1/168 (0%)
Frame = -2
Query: 605 IAEDRSLLLEKEYRNNILDDLLEVKSFLTQRLGEMRNADTSSLQHQVQAVSPFVLQQHAP 426
I + ++L + RN LD+L E++ FL R EM +++ Q+ S +
Sbjct: 372 INPNETILEFRPLRNQFLDELFELEIFLNNRCFEMEKSNSMFGIDQLNDESTDISTSQCK 431
Query: 425 DSLENMLVEISSAISLLTNQKTLDLIMILNSKRFLDRLVSSLEEKKHHEVKLREGLGDLS 246
+ L++ IS + L+N + ++ I +SK+F+DRLV +K+ + K + + +
Sbjct: 432 EYLKS----ISDILIKLSNTRVRQILEIKSSKKFVDRLVLQFTQKQQNIAKYTQLIIESD 487
Query: 245 VKRMELQNALSSSWPKQEAAITKTRELKKLCESTLS-SVFDGRPVYII 105
K +L L S K + +T+ LK E ++S S+FD + + I+
Sbjct: 488 QKIEDLNLTLGQSRNKIDQFNKETKILKSNLEQSISNSLFDKKKINIM 535
>ref|XP_514562.1| PREDICTED: similar to CDK5 regulatory subunit associated protein 3
isoform b; ischemic heart CDK5 activator-binding protein
C53; CDK5 activator-binding protein C53 [Pan
troglodytes]
Length = 184
Score = 52.8 bits (125), Expect = 9e-06
Identities = 44/145 (30%), Positives = 76/145 (52%), Gaps = 3/145 (2%)
Frame = -2
Query: 542 LEVKSFLTQRLGEM-RNADTSSLQHQVQAVSPFVLQQHAPDSLENMLVEISSAISLLTNQ 366
+E++ FL QR E+ AD S+ Q Q ++P +LQ + + M+ + I LT+
Sbjct: 1 MELEIFLAQRAVELSEKADVLSVS-QFQ-LAPAILQGQTKEKMVIMVSVLEDLIGKLTSL 58
Query: 365 KTLDLIMILNSKRFLDRLVSSLEE--KKHHEVKLREGLGDLSVKRMELQNALSSSWPKQE 192
+ L MIL S R++DR+ L++ K+ + L++ L + K+ E + PK +
Sbjct: 59 QLQHLFMILASPRYVDRVTEFLQQNLKQSQLLALKKEL--MVQKQQEALEEQEALEPKLD 116
Query: 191 AAITKTRELKKLCESTLSSVFDGRP 117
+ KT+EL+KL E+ +S RP
Sbjct: 117 LLLEKTKELQKLIEADISKRQKTRP 141
>gb|AAX24395.2| SJCHGC03338 protein [Schistosoma japonicum]
Length = 182
Score = 42.0 bits (97), Expect = 0.016
Identities = 41/180 (22%), Positives = 74/180 (41%), Gaps = 24/180 (13%)
Frame = -2
Query: 566 RNNILDDLLEVKSFLTQ------------------RLGEMRNADTSSLQHQVQAVSPFVL 441
R +L+DLLE+K+FL + LG ++ + ++ + +P L
Sbjct: 6 RQALLNDLLELKAFLLRFQEDLHERLDNESRTGRNTLGRSGSSGSDTIHSMIMQNAPNDL 65
Query: 440 QQHAPDSLENMLVEISSAISLLTNQKTLDLIMILNSKRFLDRLVSSLEEKKHH------E 279
Q + D + M+ ++ A+ +T L+MI +LDRL L + +
Sbjct: 66 QSYTTDDITKMIELVNEALDKMTTSSLSQLMMIRTKIGYLDRLTDRLMDYRRQVELARTR 125
Query: 278 VKLREGLGDLSVKRMELQNALSSSWPKQEAAITKTRELKKLCESTLSSVFDGRPVYIIGE 99
V + L D ++K E + + R+L ES LS++ + R V I G+
Sbjct: 126 VNQTQHLIDKAIKEQEEKTVQLTQHR------DSCRKLVNFLESELSTICN-RQVQITGQ 178
>gb|EAR90763.1| hypothetical protein TTHERM_00709760 [Tetrahymena thermophila
SB210]
Length = 953
Score = 40.8 bits (94), Expect = 0.037
Identities = 41/167 (24%), Positives = 76/167 (45%), Gaps = 13/167 (7%)
Frame = -2
Query: 623 RAQSQMIAEDRSLLLEKEYRNNILDDLLEVKSFLTQRLGEMRNADTSSLQHQVQAVSPFV 444
+ QSQ + +L+ E + N+ D L++ + + E N ++ Q Q Q V
Sbjct: 13 KQQSQQPQASQLNVLDWEQQINLSDKTLQILQQIEDQQEEKINLSSNQQQQQQQQQKSQV 72
Query: 443 LQQHAPDSLENMLVEISSAISL------LTNQ--KTLDLIMILNSK-----RFLDRLVSS 303
+Q+ + L+++ +EI +S ++NQ K + I I N + +FL+ ++SS
Sbjct: 73 KKQNEQEQLKDLQLEIGLDVSAVLQKIDISNQELKMITDIKIANKQNQYFLQFLNDILSS 132
Query: 302 LEEKKHHEVKLREGLGDLSVKRMELQNALSSSWPKQEAAITKTRELK 162
LEE K H L + + K E S +Q+ + +E+K
Sbjct: 133 LEEIKKHFQHLEDNKKHVVEKINEFYQESSKLIDEQKNLLELQQEVK 179
>gb|AAB00143.1| putative
Length = 1015
Score = 39.7 bits (91), Expect = 0.081
Identities = 41/169 (24%), Positives = 82/169 (48%), Gaps = 8/169 (4%)
Frame = -2
Query: 617 QSQMIAEDRSLLLE------KEYRNNILDDLLEVKSFLTQRLGEMRNADTSSLQHQVQAV 456
++Q ++R LL E +EY I + LE + Q E++ + + + +++ V
Sbjct: 580 KNQAFEKERKLLNEGSSTITQEYSEKI--NTLEDELIRLQNENELKAKEIDNTRSELEKV 637
Query: 455 SPF--VLQQHAPDSLENMLVEISSAISLLTNQKTLDLIMILNSKRFLDRLVSSLEEKKHH 282
S L + ++++++ EI S +T L + +SKR L+ L L +
Sbjct: 638 SLSNDELLEEKQNTIKSLQDEILSYKDKITRNDEKLLSIERDSKRDLESLKEQLRAAQES 697
Query: 281 EVKLREGLGDLSVKRMELQNALSSSWPKQEAAITKTRELKKLCESTLSS 135
+ K+ EGL K++E +++ K++A + K++E+ K EST+ S
Sbjct: 698 KAKVEEGL-----KKLEEESS------KEKAELEKSKEMMKKLESTIES 735
>ref|XP_214340.3| PREDICTED: similar to mKIAA1901 protein [Rattus norvegicus]
Length = 1407
Score = 39.7 bits (91), Expect = 0.081
Identities = 40/145 (27%), Positives = 64/145 (44%), Gaps = 10/145 (6%)
Frame = -2
Query: 482 SLQHQVQAVSPFVLQQHAPDSLENMLVEISSAISLLTNQKTLDLI-----MILNSKRFLD 318
S++H SP Q S+ + L E+ SL +Q+T + + I + + L
Sbjct: 742 SMEHHEAGGSPSQQQMKPVISVTSALKEVGLDGSLTESQETSEEMEKSNNAISSKREILR 801
Query: 317 RLVSSL-----EEKKHHEVKLREGLGDLSVKRMELQNALSSSWPKQEAAITKTRELKKLC 153
RL +L E++KHH E +G + E +NA+SS K E + + L
Sbjct: 802 RLNENLKAQEDEKEKHHHADSCETVGHRDEREYEKENAISSDRKKWEMG---GQLVIPLD 858
Query: 152 ESTLSSVFDGRPVYIIGEINTLLSS 78
E TL + F + +GE+ L SS
Sbjct: 859 EVTLDASFSASEKHTVGEVIKLDSS 883
>emb|CAB70720.1| hypothetical protein [Homo sapiens]
Length = 1206
Score = 38.9 bits (89), Expect = 0.14
Identities = 47/184 (25%), Positives = 83/184 (45%), Gaps = 21/184 (11%)
Frame = -2
Query: 623 RAQSQMIAEDRSLLLEKEYRNNILDDLLEVKSFLTQRLGEMRNADTSSLQHQVQ------ 462
+A+ + ++ + L EKE++N DDLL+ K L Q+L E +L Q+Q
Sbjct: 475 QAEVKGYKDENNRLKEKEHKNQ--DDLLKEKETLIQQLKEELQEKNVTLDVQIQHVVEGK 532
Query: 461 -AVSPFVLQ--------QHAPDSLENMLVEISSAISL---LTNQKTLDLIMILNSKRFLD 318
A+S + LE VE S + L + ++++ L + N K F +
Sbjct: 533 RALSELTQGVTCYKAKIKELETILETQKVECSHSAKLEQDILEKESIILKLERNLKEFQE 592
Query: 317 RLVSSLEEKKH---HEVKLREGLGDLSVKRMELQNALSSSWPKQEAAITKTRELKKLCES 147
L S++ K E+KL+E + L+ ++++ L K+E T +E +KL E
Sbjct: 593 HLQDSVKNTKDLNVKELKLKEEITQLTNNLQDMKHLLQL---KEEEEETNRQETEKLKEE 649
Query: 146 TLSS 135
+S
Sbjct: 650 LSAS 653
>ref|NP_057279.2| M-phase phosphoprotein 1 [Homo sapiens]
emb|CAI12887.1| M-phase phosphoprotein 1 [Homo sapiens]
emb|CAI16831.1| M-phase phosphoprotein 1 [Homo sapiens]
Length = 1780
Score = 38.9 bits (89), Expect = 0.14
Identities = 47/184 (25%), Positives = 83/184 (45%), Gaps = 21/184 (11%)
Frame = -2
Query: 623 RAQSQMIAEDRSLLLEKEYRNNILDDLLEVKSFLTQRLGEMRNADTSSLQHQVQ------ 462
+A+ + ++ + L EKE++N DDLL+ K L Q+L E +L Q+Q
Sbjct: 1049 QAEVKGYKDENNRLKEKEHKNQ--DDLLKEKETLIQQLKEELQEKNVTLDVQIQHVVEGK 1106
Query: 461 -AVSPFVLQ--------QHAPDSLENMLVEISSAISL---LTNQKTLDLIMILNSKRFLD 318
A+S + LE VE S + L + ++++ L + N K F +
Sbjct: 1107 RALSELTQGVTCYKAKIKELETILETQKVECSHSAKLEQDILEKESIILKLERNLKEFQE 1166
Query: 317 RLVSSLEEKKH---HEVKLREGLGDLSVKRMELQNALSSSWPKQEAAITKTRELKKLCES 147
L S++ K E+KL+E + L+ ++++ L K+E T +E +KL E
Sbjct: 1167 HLQDSVKNTKDLNVKELKLKEEITQLTNNLQDMKHLLQL---KEEEEETNRQETEKLKEE 1223
Query: 146 TLSS 135
+S
Sbjct: 1224 LSAS 1227
>emb|CAI12886.1| M-phase phosphoprotein 1 [Homo sapiens]
emb|CAI16830.1| M-phase phosphoprotein 1 [Homo sapiens]
Length = 1820
Score = 38.9 bits (89), Expect = 0.14
Identities = 47/184 (25%), Positives = 83/184 (45%), Gaps = 21/184 (11%)
Frame = -2
Query: 623 RAQSQMIAEDRSLLLEKEYRNNILDDLLEVKSFLTQRLGEMRNADTSSLQHQVQ------ 462
+A+ + ++ + L EKE++N DDLL+ K L Q+L E +L Q+Q
Sbjct: 1089 QAEVKGYKDENNRLKEKEHKNQ--DDLLKEKETLIQQLKEELQEKNVTLDVQIQHVVEGK 1146
Query: 461 -AVSPFVLQ--------QHAPDSLENMLVEISSAISL---LTNQKTLDLIMILNSKRFLD 318
A+S + LE VE S + L + ++++ L + N K F +
Sbjct: 1147 RALSELTQGVTCYKAKIKELETILETQKVECSHSAKLEQDILEKESIILKLERNLKEFQE 1206
Query: 317 RLVSSLEEKKH---HEVKLREGLGDLSVKRMELQNALSSSWPKQEAAITKTRELKKLCES 147
L S++ K E+KL+E + L+ ++++ L K+E T +E +KL E
Sbjct: 1207 HLQDSVKNTKDLNVKELKLKEEITQLTNNLQDMKHLLQL---KEEEEETNRQETEKLKEE 1263
Query: 146 TLSS 135
+S
Sbjct: 1264 LSAS 1267
>ref|XP_684324.1| PREDICTED: similar to zinc finger protein 403 [Danio rerio]
Length = 849
Score = 38.5 bits (88), Expect = 0.18
Identities = 33/127 (25%), Positives = 59/127 (46%)
Frame = -2
Query: 527 FLTQRLGEMRNADTSSLQHQVQAVSPFVLQQHAPDSLENMLVEISSAISLLTNQKTLDLI 348
F T+R ++ NA+ SL V A++ + A DSL + ++E+ S++S LT+ T
Sbjct: 89 FPTERQQDLTNAEVKSLSSAVSALASKI---DASDSLSSSMIEMKSSVSDLTSSVT---- 141
Query: 347 MILNSKRFLDRLVSSLEEKKHHEVKLREGLGDLSVKRMELQNALSSSWPKQEAAITKTRE 168
L+SK +S+ ++ +++ + LS L NA++ KQ
Sbjct: 142 -ALSSK------LSATKQDVSQTTEVKSLINSLSSAVSALNNAVNDQKEKQAETERSLES 194
Query: 167 LKKLCES 147
LK +S
Sbjct: 195 LKSAVQS 201
>gb|AAP40331.1| M-phase phosphoprotein 1 [Homo sapiens]
Length = 1116
Score = 38.1 bits (87), Expect = 0.24
Identities = 47/184 (25%), Positives = 83/184 (45%), Gaps = 21/184 (11%)
Frame = -2
Query: 623 RAQSQMIAEDRSLLLEKEYRNNILDDLLEVKSFLTQRLGEMRNADTSSLQHQVQ------ 462
+A+ + ++ + L EKE++N DDLL+ K L Q+L E +L Q+Q
Sbjct: 385 QAEVKGYKDENNRLKEKEHKNQ--DDLLKEKETLIQQLKEELQEKNVTLDVQIQHVVEGK 442
Query: 461 -AVSPFVLQ--------QHAPDSLENMLVEISSAISL---LTNQKTLDLIMILNSKRFLD 318
A+S + LE VE S + L + ++++ L + N K F +
Sbjct: 443 RALSELTQGVTCYKAKIKELETILETQKVERSHSAKLEQDILEKESIILKLERNLKEFQE 502
Query: 317 RLVSSLEEKKH---HEVKLREGLGDLSVKRMELQNALSSSWPKQEAAITKTRELKKLCES 147
L S++ K E+KL+E + L+ ++++ L K+E T +E +KL E
Sbjct: 503 HLQDSVKNTKDLNVKELKLKEEITQLTNNLQDMKHLLQL---KEEEEETNRQETEKLKEE 559
Query: 146 TLSS 135
+S
Sbjct: 560 LSAS 563
>emb|CAC92509.1| Clp ATPase [Yersinia pestis CO92]
ref|NP_406745.1| Clp ATPase [Yersinia pestis CO92]
sp|Q74X11|CLPB_YERPE Chaperone clpB
Length = 857
Score = 38.1 bits (87), Expect = 0.24
Identities = 43/202 (21%), Positives = 76/202 (37%), Gaps = 32/202 (15%)
Frame = -2
Query: 572 EYRNNILDDLLEVKSFLTQRLGEMRNADTSS----------LQHQVQAVSP--------- 450
EYR I D + F + E DT + L H VQ P
Sbjct: 318 EYRQYIEKDAALERRFQKVYVAEPTVEDTIAILRGLKERYELHHHVQITDPAIVAAATLS 377
Query: 449 --FVLQQHAPDSLENMLVEISSAISLLTNQKTLDLIMILNSKRFLDRLVSSLEEKKHHEV 276
++ + PD +++ E S+I + + K LDRL + + K +
Sbjct: 378 HRYISDRQLPDKAIDLIDEAGSSIRMQMDSKP----------ESLDRLERRIIQLKLEQQ 427
Query: 275 KLREGLGDLSVKRMELQNA-----------LSSSWPKQEAAITKTRELKKLCESTLSSVF 129
L++ D S KR+E+ N L W ++A++T T+ +K E ++
Sbjct: 428 ALKKESDDASKKRLEMLNTELEQKEREYSELEEEWKAEKASLTGTQNIKTELEQAKITLE 487
Query: 128 DGRPVYIIGEINTLLSSSVSQL 63
R V + ++ L ++ +L
Sbjct: 488 QARRVGDLARMSELQYGTIPEL 509
>emb|CAH20088.1| ATP-dependent protease, Hsp 100, part of novel multi-chaperone
system with DnaK, DnaJ, and GrpE [Yersinia
pseudotuberculosis IP 32953]
ref|YP_069389.1| ATP-dependent protease, Hsp 100, part of novel multi-chaperone
system with DnaK, DnaJ, and GrpE [Yersinia
pseudotuberculosis IP 32953]
ref|ZP_01175654.1| COG0542: ATPases with chaperone activity, ATP-binding subunit
[Yersinia pestis biovar Orientalis str. IP275]
ref|ZP_00795224.1| COG0542: ATPases with chaperone activity, ATP-binding subunit
[Yersinia pestis Angola]
ref|ZP_00794406.1| COG0542: ATPases with chaperone activity, ATP-binding subunit
[Yersinia pseudotuberculosis IP 31758]
Length = 857
Score = 38.1 bits (87), Expect = 0.24
Identities = 43/202 (21%), Positives = 76/202 (37%), Gaps = 32/202 (15%)
Frame = -2
Query: 572 EYRNNILDDLLEVKSFLTQRLGEMRNADTSS----------LQHQVQAVSP--------- 450
EYR I D + F + E DT + L H VQ P
Sbjct: 318 EYRQYIEKDAALERRFQKVYVAEPTVEDTIAILRGLKERYELHHHVQITDPAIVAAATLS 377
Query: 449 --FVLQQHAPDSLENMLVEISSAISLLTNQKTLDLIMILNSKRFLDRLVSSLEEKKHHEV 276
++ + PD +++ E S+I + + K LDRL + + K +
Sbjct: 378 HRYISDRQLPDKAIDLIDEAGSSIRMQMDSKP----------ESLDRLERRIIQLKLEQQ 427
Query: 275 KLREGLGDLSVKRMELQNA-----------LSSSWPKQEAAITKTRELKKLCESTLSSVF 129
L++ D S KR+E+ N L W ++A++T T+ +K E ++
Sbjct: 428 ALKKESDDASKKRLEMLNTELEQKEREYSELEEEWKAEKASLTGTQNIKTELEQAKITLE 487
Query: 128 DGRPVYIIGEINTLLSSSVSQL 63
R V + ++ L ++ +L
Sbjct: 488 QARRVGDLARMSELQYGTIPEL 509
>ref|ZP_00824294.1| COG0542: ATPases with chaperone activity, ATP-binding subunit
[Yersinia mollaretii ATCC 43969]
Length = 857
Score = 38.1 bits (87), Expect = 0.24
Identities = 43/202 (21%), Positives = 75/202 (37%), Gaps = 32/202 (15%)
Frame = -2
Query: 572 EYRNNILDDLLEVKSFLTQRLGEMRNADTSS----------LQHQVQAVSP--------- 450
EYR I D + F + E DT + L H VQ P
Sbjct: 318 EYRQYIEKDAALERRFQKVYVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLS 377
Query: 449 --FVLQQHAPDSLENMLVEISSAISLLTNQKTLDLIMILNSKRFLDRLVSSLEEKKHHEV 276
++ + PD +++ E S+I + + K LDRL + + K +
Sbjct: 378 HRYIADRQLPDKAIDLIDEAGSSIRMQMDSKP----------ESLDRLERRIIQLKLEQQ 427
Query: 275 KLREGLGDLSVKRMELQNA-----------LSSSWPKQEAAITKTRELKKLCESTLSSVF 129
L++ D S KR+E+ N L W ++A++T T+ +K E ++
Sbjct: 428 ALKKESDDASKKRLEMLNTELEQKEREYSELEEEWKAEKASLTGTQNIKTELEQAKITLE 487
Query: 128 DGRPVYIIGEINTLLSSSVSQL 63
R V + ++ L + +L
Sbjct: 488 QARRVGDLARMSELQYGKIPEL 509
>ref|ZP_00820808.1| COG0542: ATPases with chaperone activity, ATP-binding subunit
[Yersinia bercovieri ATCC 43970]
Length = 857
Score = 38.1 bits (87), Expect = 0.24
Identities = 43/202 (21%), Positives = 75/202 (37%), Gaps = 32/202 (15%)
Frame = -2
Query: 572 EYRNNILDDLLEVKSFLTQRLGEMRNADTSS----------LQHQVQAVSP--------- 450
EYR I D + F + E DT + L H VQ P
Sbjct: 318 EYRQYIEKDAALERRFQKVYVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLS 377
Query: 449 --FVLQQHAPDSLENMLVEISSAISLLTNQKTLDLIMILNSKRFLDRLVSSLEEKKHHEV 276
++ + PD +++ E S+I + + K LDRL + + K +
Sbjct: 378 HRYIADRQLPDKAIDLIDEAGSSIRMQMDSKP----------ESLDRLERRIIQLKLEQQ 427
Query: 275 KLREGLGDLSVKRMELQNA-----------LSSSWPKQEAAITKTRELKKLCESTLSSVF 129
L++ D S KR+E+ N L W ++A++T T+ +K E ++
Sbjct: 428 ALKKESDDASKKRLEMLNTELEQKEREYSELEEEWKAEKASLTGTQNIKTELEQAKITLE 487
Query: 128 DGRPVYIIGEINTLLSSSVSQL 63
R V + ++ L + +L
Sbjct: 488 QARRVGDLARMSELQYGKIPEL 509
>gb|EAS03846.1| hypothetical protein TTHERM_00658900 [Tetrahymena thermophila
SB210]
Length = 702
Score = 38.1 bits (87), Expect = 0.24
Identities = 29/139 (20%), Positives = 66/139 (47%), Gaps = 3/139 (2%)
Frame = -2
Query: 617 QSQMIAEDRSLLLEKEYRNNI---LDDLLEVKSFLTQRLGEMRNADTSSLQHQVQAVSPF 447
+ Q+ L EK +N+ L DL ++K + +Q + E++ + ++Q +V++
Sbjct: 302 EEQIRQSQEELQTEKRRADNLHSKLKDLDQIKQYQSQ-ITELKTVN-QNIQQKVESYQKI 359
Query: 446 VLQQHAPDSLENMLVEISSAISLLTNQKTLDLIMILNSKRFLDRLVSSLEEKKHHEVKLR 267
+ QQ LE + E I + QKT I I + + R + ++E+ ++ ++KL
Sbjct: 360 IEQQK--HKLEKEVKEKQQIIDQIKTQKTQMQIEIEEKQSMIQRYLDTIEQNENEKIKLS 417
Query: 266 EGLGDLSVKRMELQNALSS 210
+ + + ++ + + S
Sbjct: 418 QKINEYEYTYLDQKKEIES 436
>gb|AAB88727.1| M-phase phosphoprotein-1 [Homo sapiens]
Length = 753
Score = 38.1 bits (87), Expect = 0.24
Identities = 47/184 (25%), Positives = 83/184 (45%), Gaps = 21/184 (11%)
Frame = -2
Query: 623 RAQSQMIAEDRSLLLEKEYRNNILDDLLEVKSFLTQRLGEMRNADTSSLQHQVQ------ 462
+A+ + ++ + L EKE++N DDLL+ K L Q+L E +L Q+Q
Sbjct: 22 QAEVKGYKDENNRLKEKEHKNQ--DDLLKEKETLIQQLKEELQEKNVTLDVQIQHVVEGK 79
Query: 461 -AVSPFVLQ--------QHAPDSLENMLVEISSAISL---LTNQKTLDLIMILNSKRFLD 318
A+S + LE VE S + L + ++++ L + N K F +
Sbjct: 80 RALSELTQGVTCYKAKIKELETILETQKVERSHSAKLEQDILEKESIILKLERNLKEFQE 139
Query: 317 RLVSSLEEKKH---HEVKLREGLGDLSVKRMELQNALSSSWPKQEAAITKTRELKKLCES 147
L S++ K E+KL+E + L+ ++++ L K+E T +E +KL E
Sbjct: 140 HLQDSVKNTKDLNVKELKLKEEITQLTNNLQDMKHLLQL---KEEEEETNRQETEKLKEE 196
Query: 146 TLSS 135
+S
Sbjct: 197 LSAS 200
>gb|AAS60923.1| Clp ATPase [Yersinia pestis biovar Medievalis str. 91001]
gb|AAM84496.1| heat shock protein [Yersinia pestis KIM]
ref|NP_668245.1| heat shock protein [Yersinia pestis KIM]
ref|NP_992046.1| Clp ATPase [Yersinia pestis biovar Medievalis str. 91001]
Length = 864
Score = 38.1 bits (87), Expect = 0.24
Identities = 43/202 (21%), Positives = 76/202 (37%), Gaps = 32/202 (15%)
Frame = -2
Query: 572 EYRNNILDDLLEVKSFLTQRLGEMRNADTSS----------LQHQVQAVSP--------- 450
EYR I D + F + E DT + L H VQ P
Sbjct: 325 EYRQYIEKDAALERRFQKVYVAEPTVEDTIAILRGLKERYELHHHVQITDPAIVAAATLS 384
Query: 449 --FVLQQHAPDSLENMLVEISSAISLLTNQKTLDLIMILNSKRFLDRLVSSLEEKKHHEV 276
++ + PD +++ E S+I + + K LDRL + + K +
Sbjct: 385 HRYISDRQLPDKAIDLIDEAGSSIRMQMDSKP----------ESLDRLERRIIQLKLEQQ 434
Query: 275 KLREGLGDLSVKRMELQNA-----------LSSSWPKQEAAITKTRELKKLCESTLSSVF 129
L++ D S KR+E+ N L W ++A++T T+ +K E ++
Sbjct: 435 ALKKESDDASKKRLEMLNTELEQKEREYSELEEEWKAEKASLTGTQNIKTELEQAKITLE 494
Query: 128 DGRPVYIIGEINTLLSSSVSQL 63
R V + ++ L ++ +L
Sbjct: 495 QARRVGDLARMSELQYGTIPEL 516
>emb|CAB55962.1| hypothetical protein [Homo sapiens]
Length = 1780
Score = 38.1 bits (87), Expect = 0.24
Identities = 47/184 (25%), Positives = 83/184 (45%), Gaps = 21/184 (11%)
Frame = -2
Query: 623 RAQSQMIAEDRSLLLEKEYRNNILDDLLEVKSFLTQRLGEMRNADTSSLQHQVQ------ 462
+A+ + ++ + L EKE++N DDLL+ K L Q+L E +L Q+Q
Sbjct: 1049 QAEVKGYKDENNRLKEKEHKNQ--DDLLKEKETLIQQLKEELQEKNVTLDVQIQHVVEGK 1106
Query: 461 -AVSPFVLQ--------QHAPDSLENMLVEISSAISL---LTNQKTLDLIMILNSKRFLD 318
A+S + LE VE S + L + ++++ L + N K F +
Sbjct: 1107 RALSELTQGVTCYKAKIKELETILETQKVERSHSAKLEQDILEKESIILKLERNLKEFQE 1166
Query: 317 RLVSSLEEKKH---HEVKLREGLGDLSVKRMELQNALSSSWPKQEAAITKTRELKKLCES 147
L S++ K E+KL+E + L+ ++++ L K+E T +E +KL E
Sbjct: 1167 HLQDSVKNTKDLNVKELKLKEEITQLTNNLQDMKHLLQL---KEEEEETNRQETEKLKEE 1223
Query: 146 TLSS 135
+S
Sbjct: 1224 LSAS 1227
>dbj|BAB69456.1| mitotic kinesin-related protein [Homo sapiens]
Length = 1820
Score = 38.1 bits (87), Expect = 0.24
Identities = 47/184 (25%), Positives = 83/184 (45%), Gaps = 21/184 (11%)
Frame = -2
Query: 623 RAQSQMIAEDRSLLLEKEYRNNILDDLLEVKSFLTQRLGEMRNADTSSLQHQVQ------ 462
+A+ + ++ + L EKE++N DDLL+ K L Q+L E +L Q+Q
Sbjct: 1089 QAEVKGYKDENNRLKEKEHKNQ--DDLLKEKETLIQQLKEELQEKNVTLDVQIQHVVEGK 1146
Query: 461 -AVSPFVLQ--------QHAPDSLENMLVEISSAISL---LTNQKTLDLIMILNSKRFLD 318
A+S + LE VE S + L + ++++ L + N K F +
Sbjct: 1147 RALSELTQGVTCYKAKIKELETILETQKVERSHSAKLEQDILEKESIILKLERNLKEFQE 1206
Query: 317 RLVSSLEEKKH---HEVKLREGLGDLSVKRMELQNALSSSWPKQEAAITKTRELKKLCES 147
L S++ K E+KL+E + L+ ++++ L K+E T +E +KL E
Sbjct: 1207 HLQDSVKNTKDLNVKELKLKEEITQLTNNLQDMKHLLQL---KEEEEETNRQETEKLKEE 1263
Query: 146 TLSS 135
+S
Sbjct: 1264 LSAS 1267
>dbj|BAE73859.1| heat shock protein [Sodalis glossinidius str. 'morsitans']
ref|YP_454264.1| heat shock protein [Sodalis glossinidius str. 'morsitans']
Length = 864
Score = 37.7 bits (86), Expect = 0.31
Identities = 43/202 (21%), Positives = 77/202 (38%), Gaps = 32/202 (15%)
Frame = -2
Query: 572 EYRNNILDDLLEVKSFLTQRLGEMRNADTSS----------LQHQVQAVSP--------- 450
EYR I D + F + E DT + L H VQ P
Sbjct: 325 EYRKFIEKDAALERRFQKVFVAEPNVEDTIAILRGLKERYELHHHVQITDPAIVAAATLS 384
Query: 449 --FVLQQHAPDSLENMLVEISSAISLLTNQKTLDLIMILNSKRFLDRLVSSLEEKKHHEV 276
++ + PD +++ E +S+I + + K +L DRL + + K +
Sbjct: 385 HRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEEL----------DRLDRRIIQLKLEQQ 434
Query: 275 KLREGLGDLSVKRMELQN-----------ALSSSWPKQEAAITKTRELKKLCESTLSSVF 129
L++ D S+KR+ + N L W ++A+++ T+ LK E S+
Sbjct: 435 ALKKESDDASLKRLAMLNDELAQKERDYSELEEEWKAEKASLSGTQHLKAELEQAKISIE 494
Query: 128 DGRPVYIIGEINTLLSSSVSQL 63
R V + ++ L + +L
Sbjct: 495 QARRVGDLARMSELQYGKIPEL 516
>dbj|BAB15043.1| unnamed protein product [Homo sapiens]
Length = 696
Score = 37.0 bits (84), Expect = 0.53
Identities = 46/184 (25%), Positives = 83/184 (45%), Gaps = 21/184 (11%)
Frame = -2
Query: 623 RAQSQMIAEDRSLLLEKEYRNNILDDLLEVKSFLTQRLGEMRNADTSSLQHQVQ------ 462
+A+ + ++ + L E+E++N DDLL+ K L Q+L E +L Q+Q
Sbjct: 300 QAEVKGYKDENNRLKEREHKNQ--DDLLKEKETLIQQLKEELQEKNVTLDVQIQHVVEGK 357
Query: 461 -AVSPFVLQ--------QHAPDSLENMLVEISSAISL---LTNQKTLDLIMILNSKRFLD 318
A+S + LE VE S + L + ++++ L + N K F +
Sbjct: 358 RALSELTQGVTCYKAKIKELETILETQKVERSHSAKLEQDILEKESIILKLERNLKEFQE 417
Query: 317 RLVSSLEEKKH---HEVKLREGLGDLSVKRMELQNALSSSWPKQEAAITKTRELKKLCES 147
L S++ K E+KL+E + L+ ++++ L K+E T +E +KL E
Sbjct: 418 HLQDSVKNTKDLNVKELKLKEEITQLTNNLQDMKHLLQL---KEEEEETNRQETEKLKEE 474
Query: 146 TLSS 135
+S
Sbjct: 475 LSAS 478
>ref|ZP_00831746.1| COG0542: ATPases with chaperone activity, ATP-binding subunit
[Yersinia intermedia ATCC 29909]
Length = 857
Score = 37.0 bits (84), Expect = 0.53
Identities = 43/202 (21%), Positives = 74/202 (36%), Gaps = 32/202 (15%)
Frame = -2
Query: 572 EYRNNILDDLLEVKSFLTQRLGEMRNADTSS----------LQHQVQAVSP--------- 450
EYR I D + F + E DT + L H VQ P
Sbjct: 318 EYRQYIEKDAALERRFQKVYVAEPTVEDTIAILRGLKERYELHHHVQITDPAIVAAATLS 377
Query: 449 --FVLQQHAPDSLENMLVEISSAISLLTNQKTLDLIMILNSKRFLDRLVSSLEEKKHHEV 276
++ + PD +++ E S+I + + K LDRL + + K +
Sbjct: 378 HRYISDRQLPDKAIDLIDEAGSSIRMQMDSKP----------ESLDRLERRIIQLKLEQQ 427
Query: 275 KLREGLGDLSVKRMELQNA-----------LSSSWPKQEAAITKTRELKKLCESTLSSVF 129
L + D S KR+E+ N L W ++A++T T+ +K E ++
Sbjct: 428 ALNKESDDASKKRLEMLNTELEQKEREYSELEEEWKAEKASLTGTQNIKTELEQAKITLE 487
Query: 128 DGRPVYIIGEINTLLSSSVSQL 63
R V + ++ L + +L
Sbjct: 488 QARRVGDLARMSELQYGKIPEL 509
>ref|XP_637740.1| myosin II heavy chain [Dictyostelium discoideum]
gb|EAL64202.1| myosin II heavy chain [Dictyostelium discoideum]
Length = 2116
Score = 37.0 bits (84), Expect = 0.53
Identities = 40/166 (24%), Positives = 72/166 (43%), Gaps = 16/166 (9%)
Frame = -2
Query: 611 QMIAEDRSLLLEKEYRNNILD---DLLEVKSFLTQRLGEMRNADTS---------SLQHQ 468
++ ++ R LL + + I + ++LE+KS LT + + S LQ Q
Sbjct: 812 KLFSKARPLLKRRNFEKEIKEKEREILELKSNLTDSTTQKDKLEKSLKDTESNVLDLQRQ 871
Query: 467 VQAVSPFVLQQH-APDSLENMLVEISSAISLLTNQ---KTLDLIMILNSKRFLDRLVSSL 300
++A + + + D+LE E+ + + ++ K L L + N KR ++ V L
Sbjct: 872 LKAEKETLKAMYDSKDALEAQKRELEIRVEDMESELDEKKLALENLQNQKRSVEEKVRDL 931
Query: 299 EEKKHHEVKLREGLGDLSVKRMELQNALSSSWPKQEAAITKTRELK 162
EE+ E KLR L L K E + Q I++ ++K
Sbjct: 932 EEELQEEQKLRNTLEKLKKKYEEELEEMKRVNDGQSDTISRLEKIK 977
>sp|P08799|MYS2_DICDI Myosin II heavy chain, non muscle
gb|AAA33227.1| myosin heavy chain
Length = 2116
Score = 37.0 bits (84), Expect = 0.53
Identities = 40/166 (24%), Positives = 72/166 (43%), Gaps = 16/166 (9%)
Frame = -2
Query: 611 QMIAEDRSLLLEKEYRNNILD---DLLEVKSFLTQRLGEMRNADTS---------SLQHQ 468
++ ++ R LL + + I + ++LE+KS LT + + S LQ Q
Sbjct: 812 KLFSKARPLLKRRNFEKEIKEKEREILELKSNLTDSTTQKDKLEKSLKDTESNVLDLQRQ 871
Query: 467 VQAVSPFVLQQH-APDSLENMLVEISSAISLLTNQ---KTLDLIMILNSKRFLDRLVSSL 300
++A + + + D+LE E+ + + ++ K L L + N KR ++ V L
Sbjct: 872 LKAEKETLKAMYDSKDALEAQKRELEIRVEDMESELDEKKLALENLQNQKRSVEEKVRDL 931
Query: 299 EEKKHHEVKLREGLGDLSVKRMELQNALSSSWPKQEAAITKTRELK 162
EE+ E KLR L L K E + Q I++ ++K
Sbjct: 932 EEELQEEQKLRNTLEKLKKKYEEELEEMKRVNDGQSDTISRLEKIK 977
>ref|XP_395575.2| PREDICTED: similar to novel protein, partial [Apis mellifera]
Length = 777
Score = 36.6 bits (83), Expect = 0.69
Identities = 36/158 (22%), Positives = 73/158 (46%), Gaps = 11/158 (6%)
Frame = -2
Query: 599 EDRSLLLEKEYRNNILDDLLEVKSFLTQRLGEMRNA------DTSSLQHQVQA-VSPFVL 441
+ +L+LEKE + ++ L E +T E+ N TS LQ + +S
Sbjct: 99 QKENLILEKERLISEVETLKERLKNMTLYTDELENKISIATQKTSELQENIDVQLSEISR 158
Query: 440 QQHAPDSLENMLVEISSAISLLTNQKTLDLIMILNSKRFLDRLVSSLEEKKHHEVKLREG 261
++ E ++++ ++L I I + +L SSL+E+K K+++
Sbjct: 159 ERRGRLKAEEEVLQLQDELTLKKADLESATITINTMTTNITKLESSLKEQKASSEKMQKE 218
Query: 260 LGDLSVKRM----ELQNALSSSWPKQEAAITKTRELKK 159
+ LSVK++ +L+NA S ++ + K +++K+
Sbjct: 219 INKLSVKKLNLETDLENANSQIDTLEKDMLEKEKKIKE 256
>ref|XP_818988.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
gb|EAN97137.1| hypothetical protein, conserved [Trypanosoma cruzi]
Length = 413
Score = 36.2 bits (82), Expect = 0.90
Identities = 38/173 (21%), Positives = 74/173 (42%), Gaps = 13/173 (7%)
Frame = -2
Query: 563 NNILDDLLEVKSFLTQRLGEMRNADTSSLQH------QVQAVSPFVLQQHAPDSLENMLV 402
N +DD E K T + + D S+ H ++QA + F ++ + D + L
Sbjct: 248 NKRMDDGCEEKP--TDTVKGIFTIDVSNAAHRKNILTELQAFACFASERSSMD--DESLA 303
Query: 401 EISSAISLLTNQKTLDLIMILNSKRFLDRLVSSLEEKKHHEVKLREGLGDLSVKRM---- 234
E ++A+ +L + T + + L S E+ +L+ G+ S+++
Sbjct: 304 EPAAAVEVLVKKLTASTEAVFVRMKTTPTLRFSFMEEVR---RLQRGIAAASMRKSNSQA 360
Query: 233 ---ELQNALSSSWPKQEAAITKTRELKKLCESTLSSVFDGRPVYIIGEINTLL 84
++Q + P+ +A + + C + L +F GR V I+G+IN L
Sbjct: 361 RVHQIQEEIERLGPQLDALLIAAGNCRDECLAELLKMFPGRTVTIVGDINKYL 413
>ref|ZP_01073555.1| stage 0 sporulation protein J [Campylobacter fetus subsp. fetus
82-40]
gb|EAQ61748.1| stage 0 sporulation protein J [Campylobacter fetus subsp. fetus
82-40]
Length = 281
Score = 35.8 bits (81), Expect = 1.2
Identities = 38/176 (21%), Positives = 74/176 (42%), Gaps = 14/176 (7%)
Frame = -2
Query: 605 IAEDRSLLLEKEYRNNILDDLLEVKSFLTQRLGEMRNADTSSLQHQVQAVSPFVLQQHAP 426
I ED +KE +++ D+ ++ + ++ D SL ++ L Q
Sbjct: 10 ILEDVENAYDKELNRDLISDI-DIDKIIPNPFQPRKHFDQESLSELSASIEKHGLIQPI- 67
Query: 425 DSLENMLVEISSAISLLTNQKTLDLIMILNSKRFLDRLVSSLEEKKHHEVKLREGLGDLS 246
++++ + +L+ ++ L +L K + +V++LE++ E+ L E + +
Sbjct: 68 -----IVIKKGNGYTLIAGERRLRATKLLG-KDSIKAIVANLEDQNLRELALIENIQREN 121
Query: 245 VKRMELQN--------------ALSSSWPKQEAAITKTRELKKLCESTLSSVFDGR 120
+ +EL N ALS+ K IT T L L EST + DG+
Sbjct: 122 LSPIELANSYKELIEEYKITQEALSNIIKKSRTVITNTLRLLSLDESTKRLIEDGK 177
>ref|ZP_00827770.1| COG0542: ATPases with chaperone activity, ATP-binding subunit
[Yersinia frederiksenii ATCC 33641]
Length = 857
Score = 35.8 bits (81), Expect = 1.2
Identities = 42/202 (20%), Positives = 75/202 (37%), Gaps = 32/202 (15%)
Frame = -2
Query: 572 EYRNNILDDLLEVKSFLTQRLGEMRNADTSS----------LQHQVQAVSP--------- 450
EYR I D + F + E DT + L H VQ P
Sbjct: 318 EYRQYIEKDAALERRFQKVYVAEPTVEDTIAILRGLKERYELHHHVQITDPAIVAAATLS 377
Query: 449 --FVLQQHAPDSLENMLVEISSAISLLTNQKTLDLIMILNSKRFLDRLVSSLEEKKHHEV 276
++ + PD +++ E S+I + + K LDRL + + K +
Sbjct: 378 HRYISDRQLPDKAIDLIDEAGSSIRMQMDSKP----------ESLDRLERRIIQLKLEQQ 427
Query: 275 KLREGLGDLSVKRMEL-----------QNALSSSWPKQEAAITKTRELKKLCESTLSSVF 129
L++ D S KR+E+ + L W ++A++T T+ +K E ++
Sbjct: 428 ALKKESDDASKKRLEMLETELEQKEREYSELEEEWKAEKASLTGTQNIKTELEQAKITLE 487
Query: 128 DGRPVYIIGEINTLLSSSVSQL 63
R V + ++ L + +L
Sbjct: 488 QARRVGDLARMSELQYGKIPEL 509
>ref|ZP_00525060.1| DNA mismatch repair protein MutS, C-terminal:Smr protein/MutS2
C-terminal [Solibacter usitatus Ellin6076]
gb|EAM55932.1| DNA mismatch repair protein MutS, C-terminal:Smr protein/MutS2
C-terminal [Solibacter usitatus Ellin6076]
Length = 796
Score = 35.8 bits (81), Expect = 1.2
Identities = 26/78 (33%), Positives = 42/78 (53%)
Frame = -2
Query: 329 RFLDRLVSSLEEKKHHEVKLREGLGDLSVKRMELQNALSSSWPKQEAAITKTRELKKLCE 150
RFL L +EE + EV LRE + +LS + E +++ W K+E A K +EL++ +
Sbjct: 527 RFLSELHHRIEETQALEVTLREKIAELSRREKE----IAAEWEKRETA--KIKELERRTD 580
Query: 149 STLSSVFDGRPVYIIGEI 96
L+ F+ + IG I
Sbjct: 581 QALAK-FEEQAQDAIGRI 597
>ref|XP_809838.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
gb|EAN87987.1| hypothetical protein, conserved [Trypanosoma cruzi]
Length = 856
Score = 35.8 bits (81), Expect = 1.2
Identities = 44/181 (24%), Positives = 75/181 (41%), Gaps = 17/181 (9%)
Frame = -2
Query: 599 EDRSLLLEKEYRNNILDDLLEVKSFLTQRLGEMR--NADTSSLQHQVQAVSPFVLQQHAP 426
E R L+ E + R L L ++ R+G M A + +Q V+A QH
Sbjct: 618 ERRRLVAELQERQRSLGAL---RNRYDVRVGRMDPDQAHLTQVQLVVEAAKEREALQHKG 674
Query: 425 DSLENMLVEISSAISLLTNQKTLDLIMILNS--KRFLDRLVSSLEEKKHH---EVKLREG 261
D+L+ + + LL ++TL +I NS + DR+ + E+K E K RE
Sbjct: 675 DALDARVARLER--DLLKLERTLQVIRASNSNYRHMFDRVQDNDAEEKTRRALEAKRREL 732
Query: 260 LGDLSVKRMELQ----------NALSSSWPKQEAAITKTRELKKLCESTLSSVFDGRPVY 111
+S + +E + L ++E + EL++ CE ++ +GR
Sbjct: 733 KTFISRRALEASEYQEVLHGRASELQQVLERKERTLNAVEELRQACEHAHGTILEGRETI 792
Query: 110 I 108
I
Sbjct: 793 I 793
>ref|XP_887627.1| PREDICTED: similar to Pre-B-cell leukemia transcription factor 2
(Homeobox protein PBX2) (G17 protein) isoform 4 [Bos
taurus]
Length = 450
Score = 35.8 bits (81), Expect = 1.2
Identities = 47/160 (29%), Positives = 73/160 (45%), Gaps = 15/160 (9%)
Frame = -2
Query: 515 RLGEMRNADTSSLQHQVQAVSPF------VLQQH------APDSLENMLVEIS---SAIS 381
+L ++R+ S L+ QA + F +L++ AP +E M+ I SAI
Sbjct: 164 KLAQIRHIYHSELEKYEQACNEFTTHVMNLLREQSRTRPVAPKEMERMVSIIHRKFSAIQ 223
Query: 380 LLTNQKTLDLIMILNSKRFLDRLVSSLEEKKHHEVKLREGLGDLSVKRMELQNALSSSWP 201
+ Q T + +MIL S RFLD + ++++ + E L + + LS+ +P
Sbjct: 224 MQLKQSTCEAVMILRS-RFLD----ARRKRRNFSKQATEVLNEY------FYSHLSNPYP 272
Query: 200 KQEAAITKTRELKKLCESTLSSVFDGRPVYIIGEINTLLS 81
+EA EL K C T+S V P IG TLLS
Sbjct: 273 SEEA----KEELAKKCGITVSQV----PGRRIGSHLTLLS 304
>ref|XP_805164.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
gb|EAN83313.1| hypothetical protein, conserved [Trypanosoma cruzi]
Length = 896
Score = 35.4 bits (80), Expect = 1.5
Identities = 44/181 (24%), Positives = 75/181 (41%), Gaps = 17/181 (9%)
Frame = -2
Query: 599 EDRSLLLEKEYRNNILDDLLEVKSFLTQRLGEMR--NADTSSLQHQVQAVSPFVLQQHAP 426
E R L+ E + R L L ++ R+G M A + +Q V+A QH
Sbjct: 658 ERRRLVAELQERQRSLGAL---RNRYDVRVGRMDPDQAHLTQVQLVVEAAKEREALQHKG 714
Query: 425 DSLENMLVEISSAISLLTNQKTLDLIMILNS--KRFLDRLVSSLEEKKHH---EVKLREG 261
D+L+ + + LL ++TL +I NS + DR+ + E+K E K RE
Sbjct: 715 DALDARVARLER--DLLKLERTLQVIRASNSNYRHMFDRVQDNDAEEKTRRALEAKRREL 772
Query: 260 LGDLSVKRMELQ----------NALSSSWPKQEAAITKTRELKKLCESTLSSVFDGRPVY 111
+S + +E + L ++E + EL++ CE ++ +GR
Sbjct: 773 KTFISRRALEASEYQEVLHGRASELQQVAERKERTLNAVEELRQACEHAHGTILEGRETI 832
Query: 110 I 108
I
Sbjct: 833 I 833
>gb|AAA64514.1| testicular protein
Length = 1029
Score = 35.4 bits (80), Expect = 1.5
Identities = 39/136 (28%), Positives = 62/136 (45%), Gaps = 27/136 (19%)
Frame = -2
Query: 608 MIAEDRSLLLEKEYRNNILDDLLEVKSFLTQRLGEMRNADTSSLQHQVQAVSPFVLQQHA 429
++AED+ LL EK+ + ++L E + LT L E R + LQ QV +QH
Sbjct: 472 ILAEDQKLLDEKKQVEKLAEELQEKEQELTFLL-ETREKEVHDLQEQVTVTK--TSEQHY 528
Query: 428 PDSLENMLVEI------------SSAISLLTNQKTL----DLIM--------ILNSKRFL 321
+E M E+ S + LL N+K + D+ + I+N K+
Sbjct: 529 LKQVEEMKTELEKEKLKNTELTASCDMLLLENKKLVQEASDMALELKKHQEDIINCKKQE 588
Query: 320 DRL---VSSLEEKKHH 282
+RL + +LEEK+ H
Sbjct: 589 ERLLKQIENLEEKEMH 604
>emb|CAD13484.1| Eps-15 protein [Drosophila melanogaster]
gb|AAM52772.1| SD09478p [Drosophila melanogaster]
Length = 1253
Score = 35.4 bits (80), Expect = 1.5
Identities = 31/120 (25%), Positives = 54/120 (45%), Gaps = 4/120 (3%)
Frame = -2
Query: 503 MRNADTSSLQHQVQAVSPFVLQQHAPDSLENMLVEISSAISLLTNQKTLDLIMILNSKRF 324
++N + SLQ ++ ++ + Q LEN E + L Q + + ++ N
Sbjct: 454 IKNGEVRSLQSELDTLTATLKQ------LENQRGEAQKRLDDLQAQVSHNTAVLANVSLD 507
Query: 323 LDRL---VSSLEEKKH-HEVKLREGLGDLSVKRMELQNALSSSWPKQEAAITKTRELKKL 156
+ R V+ + ++ H EV + E G+L+ KR ELQ Q+ + REL KL
Sbjct: 508 ISRTNEQVTKIRDQCHMQEVTINEQEGELNAKRSELQKLKDEEASLQKEYDSNNRELSKL 567
>ref|NP_611965.2| Eps-15 CG16932-PA, isoform A [Drosophila melanogaster]
gb|AAF47267.2| CG16932-PA, isoform A [Drosophila melanogaster]
Length = 1253
Score = 35.4 bits (80), Expect = 1.5
Identities = 31/120 (25%), Positives = 54/120 (45%), Gaps = 4/120 (3%)
Frame = -2
Query: 503 MRNADTSSLQHQVQAVSPFVLQQHAPDSLENMLVEISSAISLLTNQKTLDLIMILNSKRF 324
++N + SLQ ++ ++ + Q LEN E + L Q + + ++ N
Sbjct: 454 IKNGEVRSLQSELDTLTATLKQ------LENQRGEAQKRLDDLQAQVSHNTAVLANVSLD 507
Query: 323 LDRL---VSSLEEKKH-HEVKLREGLGDLSVKRMELQNALSSSWPKQEAAITKTRELKKL 156
+ R V+ + ++ H EV + E G+L+ KR ELQ Q+ + REL KL
Sbjct: 508 ISRTNEQVTKIRDQCHMQEVTINEQEGELNAKRSELQKLKDEEASLQKEYDSNNRELSKL 567
>gb|EAR82385.1| Viral A-type inclusion protein repeat containing protein [Tetrahymena
thermophila SB210]
Length = 3812
Score = 35.0 bits (79), Expect = 2.0
Identities = 30/116 (25%), Positives = 58/116 (50%), Gaps = 13/116 (11%)
Frame = -2
Query: 446 VLQQHAPDSLENMLVEISSAISLLTNQKTLDLIMILNSKRFLDRLVSSLEEKKHHEVKLR 267
+++QH DS+ N+L +I+ S K+ L+ ++ + + L ++SL + +
Sbjct: 999 LIEQHQNDSMSNILHQINGGSS---PSKSDQLVTVMETNKKLIEEMASLSDMNKKLMDEI 1055
Query: 266 EGLGDLSVKRMELQNA---------LSSSWPKQ----EAAITKTRELKKLCESTLS 138
E L ++S R+++ + L S KQ EA + + +E+K+ ESTLS
Sbjct: 1056 EMLRNMSHSRLDISSTFERNGDNEVLKSKLEKQTELNEALMQQMKEMKQHYESTLS 1111
>gb|EAR94768.1| hypothetical protein TTHERM_00673430 [Tetrahymena thermophila
SB210]
Length = 448
Score = 35.0 bits (79), Expect = 2.0
Identities = 36/173 (20%), Positives = 75/173 (43%), Gaps = 5/173 (2%)
Frame = -2
Query: 614 SQMIAEDRSLLLEKEYRNNILDDLLEVKSFLTQRLGEMRNADTSSLQHQ----VQAVSPF 447
++ I+E+ + N + +++K L ++ + QH + + F
Sbjct: 145 TKKISEEEIQFYVQNMMQNTQNSEIQIKCALKNYERYHNVSNLKAYQHLFSCIIDQLETF 204
Query: 446 VLQQHAPDSLENMLVEISSAISLLTNQKTLDLIMILNSKRFLDRLVSSLEEKKHHEVKLR 267
V + L +IS IS + N KT I I N+ +F ++L EK + L
Sbjct: 205 VKNLEINQEEQTELDQISEQISQIQNSKT---IQIQNNLQFFSEAQNNLIEKLLEKKNLN 261
Query: 266 E-GLGDLSVKRMELQNALSSSWPKQEAAITKTRELKKLCESTLSSVFDGRPVY 111
+ ++ K +E+QN++ ++ Q + ++ + KKL + T S++ + Y
Sbjct: 262 SLKINQINQKVLEIQNSMINNIYDQLSYNSQHLDTKKLLQPTQISMYQNQLFY 314
>ref|XP_395017.2| PREDICTED: similar to ENSANGP00000016764 [Apis mellifera]
Length = 204
Score = 35.0 bits (79), Expect = 2.0
Identities = 31/115 (26%), Positives = 58/115 (50%), Gaps = 8/115 (6%)
Frame = -2
Query: 425 DSLENMLVEISSAISLLTNQKTL-DLIMILNSK---RFLDRLVSSLEEKKHHEVKLREGL 258
++ +N++ EI S S + N K + + ILN++ R +L+S ++ + H L
Sbjct: 24 NTADNLISEIESVCSQIANMKQYQEEVEILNTEAKQRPHIQLISGIQREVKH-------L 76
Query: 257 GDLSVKRMELQNALSSSWPKQEAAITKTRE----LKKLCESTLSSVFDGRPVYII 105
+L + EL+ AL E ++K R+ L +LC++ LSS+ + + II
Sbjct: 77 QELQAENKELKKALEDHHHALELIMSKYRQQTASLLRLCKTDLSSLHNAKYANII 131
>gb|EAO23385.1| 4Fe-4S ferredoxin, iron-sulfur binding:ATP-binding region,
ATPase-like:Histidine kinase A, N-terminal:Hydrogenase
large subunit, C-terminal:Putative Fe-S cluster
[Syntrophomonas wolfei subsp. wolfei str. Goettingen]
ref|ZP_00664082.1| 4Fe-4S ferredoxin, iron-sulfur binding:ATP-binding region,
ATPase-like:Histidine kinase A, N-terminal:Hydrogenase
large subunit, C-terminal:Putative Fe-S cluster
[Syntrophomonas wolfei str. Goettingen]
Length = 696
Score = 35.0 bits (79), Expect = 2.0
Identities = 32/125 (25%), Positives = 58/125 (46%), Gaps = 1/125 (0%)
Frame = -2
Query: 623 RAQSQMIAEDRSLLLEKEYRNNILDDLLEVKSFLTQRLGEMRNADTSSLQHQVQAVSPFV 444
+A++ + +++ LL E+E NN++D+L + S L + + E + + +Q+ A +
Sbjct: 420 KAENCHLYQEKELLREQEILNNMVDELATLNSKLEEEMSERKQQEQLLVQNSKLAAMGEM 479
Query: 443 LQQHAPDSLENMLVEISSAISLLTNQKT-LDLIMILNSKRFLDRLVSSLEEKKHHEVKLR 267
+ A +SS +L N K LDL M ++ +S LEE HH L
Sbjct: 480 IGMIA----HQWRQPLSSISTLAGNLKVYLDLDMYEK-----NQFLSLLEEINHHAQYLS 530
Query: 266 EGLGD 252
+ D
Sbjct: 531 STIND 535
>dbj|BAE22112.1| unnamed protein product [Mus musculus]
Length = 430
Score = 35.0 bits (79), Expect = 2.0
Identities = 41/143 (28%), Positives = 66/143 (46%), Gaps = 15/143 (10%)
Frame = -2
Query: 515 RLGEMRNADTSSLQHQVQAVSPF------VLQQH------APDSLENMLVEIS---SAIS 381
+L ++R+ S L+ QA + F +L++ AP +E M+ I SAI
Sbjct: 164 KLAQIRHIYHSELEKYEQACNEFTTHVMNLLREQSRTRPVAPKEMERMVSIIHRKFSAIQ 223
Query: 380 LLTNQKTLDLIMILNSKRFLDRLVSSLEEKKHHEVKLREGLGDLSVKRMELQNALSSSWP 201
+ Q T + +MIL S RFLD + ++++ + E L + + LSS +P
Sbjct: 224 MQLKQSTCEAVMILRS-RFLD----ARRKRRNFSKQATEVLNEY------FYSHLSSPYP 272
Query: 200 KQEAAITKTRELKKLCESTLSSV 132
+EA EL K C T+S V
Sbjct: 273 SEEA----KEELAKKCGITVSQV 291
>ref|ZP_01148511.1| putative oligopeptide ABC transporter (binding protein) (initiation
of sporulation, competence development); RBL02204
[Desulfotomaculum reducens MI-1]
gb|EAR44000.1| putative oligopeptide ABC transporter (binding protein) (initiation
of sporulation, competence development); RBL02204
[Desulfotomaculum reducens MI-1]
Length = 528
Score = 34.7 bits (78), Expect = 2.6
Identities = 24/59 (40%), Positives = 31/59 (52%)
Frame = -2
Query: 599 EDRSLLLEKEYRNNILDDLLEVKSFLTQRLGEMRNADTSSLQHQVQAVSPFVLQQHAPD 423
E +S L +Y N +D+LL T R E RNA S LQ VQA +P+V H+ D
Sbjct: 445 EIKSTLNAAKYSNKQVDELL--MKGRTARTQEERNAAYSELQKIVQAEAPWVFISHSKD 501
>emb|CAE13564.1| heat shock protein F84.1 [Photorhabdus luminescens subsp. laumondii
TTO1]
sp|Q7N788|CLPB_PHOLL Chaperone clpB
ref|NP_928581.1| heat shock protein F84.1 [Photorhabdus luminescens subsp. laumondii
TTO1]
Length = 857
Score = 34.7 bits (78), Expect = 2.6
Identities = 45/177 (25%), Positives = 72/177 (40%), Gaps = 26/177 (14%)
Frame = -2
Query: 572 EYRNNILDDLLEVKSFLTQRLGEMRNADTSS----------LQHQVQAVSPFVLQQHAPD 423
EYR I D + F + E DT + L H VQ P ++ A
Sbjct: 318 EYRQYIEKDAALERRFQKVYVAEPSVEDTIAILRGLKERYELHHHVQITDPAIV---AAA 374
Query: 422 SLENMLVEI----SSAISLLTNQKTLDLIMILNSK-RFLDRLVSSLEEKKHHEVKLREGL 258
+L + + AI L+ ++ L M ++SK LDRL + + K + L++
Sbjct: 375 TLSHRYISDRMLPDKAIDLI-DEAGASLRMQMDSKPEALDRLERRVIQLKLEQQALKKES 433
Query: 257 GDLSVKRMELQN-----------ALSSSWPKQEAAITKTRELKKLCESTLSSVFDGR 120
D S KR+E+ N L W ++AA+T T+ +K E+ S+ R
Sbjct: 434 DDASKKRLEMLNEELLVKEREYSELEEEWKAEKAALTGTQHIKAELENARISLEQAR 490
>ref|XP_758749.1| hypothetical protein UM02602.1 [Ustilago maydis 521]
gb|EAK83772.1| hypothetical protein UM02602.1 [Ustilago maydis 521]
Length = 1009
Score = 34.7 bits (78), Expect = 2.6
Identities = 29/106 (27%), Positives = 47/106 (44%), Gaps = 2/106 (1%)
Frame = -2
Query: 590 SLLLEKEYRNNILDDLLEVKSFLTQ--RLGEMRNADTSSLQHQVQAVSPFVLQQHAPDSL 417
S L K R ILD +LE+ +FL + R+ E A S L +V + H L
Sbjct: 684 SALPTKATRQEILDSMLEIDTFLQEQIRIHENTEAPDSPLPSEVPSTGDLA---HVEKEL 740
Query: 416 ENMLVEISSAISLLTNQKTLDLIMILNSKRFLDRLVSSLEEKKHHE 279
E+ L +++A+ L T+ TL + +R + L K ++
Sbjct: 741 EDSL-RMAAAVQLYTSSLTLHIGQAFQGASLFERKLCFLNSIKDNK 785
>ref|XP_380887.1| hypothetical protein FG00711.1 [Gibberella zeae PH-1]
gb|EAA70657.1| hypothetical protein FG00711.1 [Gibberella zeae PH-1]
Length = 1976
Score = 34.7 bits (78), Expect = 2.6
Identities = 29/137 (21%), Positives = 64/137 (46%)
Frame = -2
Query: 620 AQSQMIAEDRSLLLEKEYRNNILDDLLEVKSFLTQRLGEMRNADTSSLQHQVQAVSPFVL 441
A + + E S++ +E + L+D+ + + +TQ + ++ ++T + Q +S
Sbjct: 767 ALERQVEEQASIVSTEEEKQKDLEDMSKTVANITQTIRDIAESETQVDRIMSQQMSGGAT 826
Query: 440 QQHAPDSLENMLVEISSAISLLTNQKTLDLIMILNSKRFLDRLVSSLEEKKHHEVKLREG 261
+ +PD + + +S + L N+ + + + +R D+L S EK K+
Sbjct: 827 R--SPDEIHELQASLSDQMRTLKNRISK---LTTDRQRTKDQLNSLELEKSELRNKISRA 881
Query: 260 LGDLSVKRMELQNALSS 210
G L K+ +LQN + +
Sbjct: 882 AGQLD-KKQDLQNQIQA 897
>ref|XP_802873.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
gb|EAN81427.1| hypothetical protein, conserved [Trypanosoma cruzi]
Length = 752
Score = 34.3 bits (77), Expect = 3.4
Identities = 38/141 (26%), Positives = 64/141 (45%), Gaps = 8/141 (5%)
Frame = -2
Query: 581 LEKEYRNNILDDLLEVKSFLTQRLGEMRNADTSSLQHQVQAVSPFVLQQHAPDSLENMLV 402
LEK +R NI D L+ + L ++L E+R L +V V V +QH + + M
Sbjct: 28 LEKRWRTNI-DQALKDEEELQRQLLELRERHGQRLSSEVARVEATVREQHQREE-KQMEG 85
Query: 401 EISSAISLLTNQKTLDLI---MILNSKRFLDRLVSSLEE--KKHHEVK---LREGLGDLS 246
E +++ L ++ + + + L K D V L+E +KHH + +RE D
Sbjct: 86 ESLASLKRLEDEVSAEFLKKKAELQQKSLAD--VQRLKEAAEKHHRTEVAAMRENHADRE 143
Query: 245 VKRMELQNALSSSWPKQEAAI 183
K E ++S K+ A+
Sbjct: 144 KKVTECGKKIASIRAKEREAV 164
>gb|AAH61940.1| MGC68805 protein [Xenopus laevis]
Length = 765
Score = 34.3 bits (77), Expect = 3.4
Identities = 41/168 (24%), Positives = 75/168 (44%), Gaps = 6/168 (3%)
Frame = -2
Query: 590 SLLLEKEYRNNIL---DDLLEVKSFLTQRLGEMRNADTSSL-QHQVQAVSPFVLQQHAPD 423
S L ++E ++ IL D L V S T R+ + ++ T L QHQ + V Q PD
Sbjct: 137 SFLTDQELKHLILEAADGFLFVVSCETGRIVYVSDSVTPVLNQHQSEWFGSSVYDQVHPD 196
Query: 422 SLENMLVEISSAISLLTNQKTLDLIMILNSKRFLDRLVSSLEEKKHHEVKLREGLGDLS- 246
L+ + ++S+A + +T R LD L + +K+ + +R +G
Sbjct: 197 DLDKLREQLSTAENAMTG-------------RILD-LKTGTVKKEGQQSSMRMCMGSRRS 242
Query: 245 -VKRMELQNALSSSWPKQEAAITKTRELKKLCESTLSSVFDGRPVYII 105
+ RM NA+ S +++ + ++ C + L DG P +++
Sbjct: 243 FICRMRCGNAVIES-----SSMNRLSFMRNRCRNGLGPSKDGEPQFVV 285
>gb|AAT30115.1| HD domain protein [Bacillus anthracis str. 'Ames Ancestor']
gb|AAT53272.1| HD domain protein [Bacillus anthracis str. Sterne]
ref|YP_027221.1| HD domain protein [Bacillus anthracis str. Sterne]
sp|Q81U72|YHAM_BACAN 3'-5' exoribonuclease yhaM
gb|AAP24999.1| HD domain protein [Bacillus anthracis str. Ames]
ref|YP_017640.1| hd domain protein [Bacillus anthracis str. 'Ames Ancestor']
ref|NP_843513.1| HD domain protein [Bacillus anthracis str. Ames]
ref|ZP_00391372.1| COG3481: Predicted HD-superfamily hydrolase [Bacillus anthracis
str. A2012]
Length = 314
Score = 34.3 bits (77), Expect = 3.4
Identities = 37/136 (27%), Positives = 63/136 (46%), Gaps = 4/136 (2%)
Frame = -2
Query: 596 DRSLLLEKEYRNN----ILDDLLEVKSFLTQRLGEMRNADTSSLQHQVQAVSPFVLQQHA 429
D S +EK+Y + D+L K + R+ ++R A+ +++V +S FV + A
Sbjct: 52 DVSPEVEKQYVAETIVKVAGDILNYKGRIQLRVKQIRVAN----ENEVTDISDFV--EKA 105
Query: 428 PDSLENMLVEISSAISLLTNQKTLDLIMILNSKRFLDRLVSSLEEKKHHEVKLREGLGDL 249
P E+M+ +I+ I + N L L +K + L K HHE GL
Sbjct: 106 PVKKEDMVEKITQYIFEMRNPNIQRLTRHLLNKHQNEFLDYPAATKNHHE--FVSGLAYH 163
Query: 248 SVKRMELQNALSSSWP 201
V ++L A+S+ +P
Sbjct: 164 VVSMLDLAKAISNLYP 179
>gb|AAT62280.1| CMP-binding factor [Bacillus thuringiensis serovar konkukian str.
97-27]
gb|AAU19325.1| CMP-binding factor [Bacillus cereus E33L]
ref|YP_035272.1| CMP-binding factor [Bacillus thuringiensis serovar konkukian str.
97-27]
ref|NP_977434.1| HD domain protein [Bacillus cereus ATCC 10987]
sp|Q81H06|YHAM_BACCR 3'-5' exoribonuclease yhaM
sp|Q73CF4|YHAM_BACC1 3'-5' exoribonuclease yhaM
sp|Q63EZ0|YHAM_BACCZ 3'-5' exoribonuclease yhaM
gb|AAP08008.1| CMP-binding factor [Bacillus cereus ATCC 14579]
gb|AAS40042.1| HD domain protein [Bacillus cereus ATCC 10987]
sp|Q6HME9|YHAM_BACHK 3'-5' exoribonuclease yhaM
ref|YP_082522.1| CMP-binding factor [Bacillus cereus E33L]
ref|NP_830807.1| CMP-binding factor [Bacillus cereus ATCC 14579]
Length = 314
Score = 34.3 bits (77), Expect = 3.4
Identities = 37/136 (27%), Positives = 63/136 (46%), Gaps = 4/136 (2%)
Frame = -2
Query: 596 DRSLLLEKEYRNN----ILDDLLEVKSFLTQRLGEMRNADTSSLQHQVQAVSPFVLQQHA 429
D S +EK+Y + D+L K + R+ ++R A+ +++V +S FV + A
Sbjct: 52 DVSPEVEKQYVAETIVKVAGDILNYKGRIQLRVKQIRVAN----ENEVTDISDFV--EKA 105
Query: 428 PDSLENMLVEISSAISLLTNQKTLDLIMILNSKRFLDRLVSSLEEKKHHEVKLREGLGDL 249
P E+M+ +I+ I + N L L +K + L K HHE GL
Sbjct: 106 PVKKEDMVEKITQYIFEMRNPNIQRLTRHLLNKHQNEFLDYPAATKNHHE--FVSGLAYH 163
Query: 248 SVKRMELQNALSSSWP 201
V ++L A+S+ +P
Sbjct: 164 VVSMLDLAKAISNLYP 179
>ref|ZP_00236025.1| CMP-binding factor [Bacillus cereus G9241]
gb|EAL16678.1| CMP-binding factor [Bacillus cereus G9241]
Length = 314
Score = 34.3 bits (77), Expect = 3.4
Identities = 37/136 (27%), Positives = 63/136 (46%), Gaps = 4/136 (2%)
Frame = -2
Query: 596 DRSLLLEKEYRNN----ILDDLLEVKSFLTQRLGEMRNADTSSLQHQVQAVSPFVLQQHA 429
D S +EK+Y + D+L K + R+ ++R A+ +++V +S FV + A
Sbjct: 52 DVSPEVEKQYVAETIVKVAGDILNYKGRIQLRVKQIRVAN----ENEVTDISDFV--EKA 105
Query: 428 PDSLENMLVEISSAISLLTNQKTLDLIMILNSKRFLDRLVSSLEEKKHHEVKLREGLGDL 249
P E+M+ +I+ I + N L L +K + L K HHE GL
Sbjct: 106 PVKKEDMVEKITQYIFEMRNPNIQRLTRHLLNKHQNEFLDYPAATKNHHE--FVSGLAYH 163
Query: 248 SVKRMELQNALSSSWP 201
V ++L A+S+ +P
Sbjct: 164 VVSMLDLAKAISNLYP 179
>ref|ZP_01185807.1| nucleic acid binding, OB-fold, tRNA/helicase-type:Metal-dependent
phosphohydrolase, HD subdomain [Bacillus
weihenstephanensis KBAB4]
gb|EAR74857.1| nucleic acid binding, OB-fold, tRNA/helicase-type:Metal-dependent
phosphohydrolase, HD subdomain [Bacillus
weihenstephanensis KBAB4]
Length = 314
Score = 34.3 bits (77), Expect = 3.4
Identities = 37/136 (27%), Positives = 63/136 (46%), Gaps = 4/136 (2%)
Frame = -2
Query: 596 DRSLLLEKEYRNN----ILDDLLEVKSFLTQRLGEMRNADTSSLQHQVQAVSPFVLQQHA 429
D S +EK+Y + D+L K + R+ ++R A+ +++V +S FV + A
Sbjct: 52 DVSPEVEKQYVAETIVKVAGDILNYKGRIQLRVKQIRVAN----ENEVTDISDFV--EKA 105
Query: 428 PDSLENMLVEISSAISLLTNQKTLDLIMILNSKRFLDRLVSSLEEKKHHEVKLREGLGDL 249
P E+M+ +I+ I + N L L +K + L K HHE GL
Sbjct: 106 PIKKEDMVEKITQYIFEMRNPNIQRLTRHLLNKHQNEFLEYPAAMKNHHE--FVSGLAYH 163
Query: 248 SVKRMELQNALSSSWP 201
V ++L A+S+ +P
Sbjct: 164 VVSMLDLAKAISALYP 179
>emb|CAA42503.1| homeobox protein [Homo sapiens]
Length = 430
Score = 33.9 bits (76), Expect = 4.5
Identities = 40/143 (27%), Positives = 66/143 (46%), Gaps = 15/143 (10%)
Frame = -2
Query: 515 RLGEMRNADTSSLQHQVQAVSPF------VLQQH------APDSLENMLVEIS---SAIS 381
+L ++R+ S L+ QA + F +L++ AP +E M+ I SAI
Sbjct: 164 KLAQIRHIYHSELEKYEQACNEFTTHVMNLLREQSRTRPVAPKEMERMVSIIHRKFSAIQ 223
Query: 380 LLTNQKTLDLIMILNSKRFLDRLVSSLEEKKHHEVKLREGLGDLSVKRMELQNALSSSWP 201
+ Q T + +MIL S RFLD + ++++ + E L + + LS+ +P
Sbjct: 224 MQLKQSTCEAVMILRS-RFLD----ARRKRRNFSKQATEVLNEY------FYSHLSNPYP 272
Query: 200 KQEAAITKTRELKKLCESTLSSV 132
+EA EL K C T+S V
Sbjct: 273 SEEA----KEELAKKCGITVSQV 291
>emb|CAE83959.1| pre-B-cell leukemia transcription factor 2 [Rattus norvegicus]
ref|NP_001002828.1| pre-B-cell leukemia transcription factor 2 [Rattus norvegicus]
Length = 430
Score = 33.9 bits (76), Expect = 4.5
Identities = 40/143 (27%), Positives = 66/143 (46%), Gaps = 15/143 (10%)
Frame = -2
Query: 515 RLGEMRNADTSSLQHQVQAVSPF------VLQQH------APDSLENMLVEIS---SAIS 381
+L ++R+ S L+ QA + F +L++ AP +E M+ I SAI
Sbjct: 164 KLAQIRHIYHSELEKYEQACNEFTTHVMNLLREQSRTRPVAPKEMERMVSIIHRKFSAIQ 223
Query: 380 LLTNQKTLDLIMILNSKRFLDRLVSSLEEKKHHEVKLREGLGDLSVKRMELQNALSSSWP 201
+ Q T + +MIL S RFLD + ++++ + E L + + LS+ +P
Sbjct: 224 MQLKQSTCEAVMILRS-RFLD----ARRKRRNFSKQATEVLNEY------FYSHLSNPYP 272
Query: 200 KQEAAITKTRELKKLCESTLSSV 132
+EA EL K C T+S V
Sbjct: 273 SEEA----KEELAKKCGITVSQV 291
>gb|AAH87615.1| Pre B-cell leukemia transcription factor 2 [Mus musculus]
Length = 430
Score = 33.9 bits (76), Expect = 4.5
Identities = 40/143 (27%), Positives = 66/143 (46%), Gaps = 15/143 (10%)
Frame = -2
Query: 515 RLGEMRNADTSSLQHQVQAVSPF------VLQQH------APDSLENMLVEIS---SAIS 381
+L ++R+ S L+ QA + F +L++ AP +E M+ I SAI
Sbjct: 164 KLAQIRHIYHSELEKYEQACNEFTTHVMNLLREQSRTRPVAPKEMERMVSIIHRKFSAIQ 223
Query: 380 LLTNQKTLDLIMILNSKRFLDRLVSSLEEKKHHEVKLREGLGDLSVKRMELQNALSSSWP 201
+ Q T + +MIL S RFLD + ++++ + E L + + LS+ +P
Sbjct: 224 MQLKQSTCEAVMILRS-RFLD----ARRKRRNFSKQATEVLNEY------FYSHLSNPYP 272
Query: 200 KQEAAITKTRELKKLCESTLSSV 132
+EA EL K C T+S V
Sbjct: 273 SEEA----KEELAKKCGITVSQV 291
>emb|CAJ18598.1| Pbx2 [Mus musculus]
gb|AAB82006.1| PBX2 [Mus musculus]
gb|AAH10287.1| Pre B-cell leukemia transcription factor 2 [Mus musculus]
sp|O35984|PBX2_MOUSE Pre-B-cell leukemia transcription factor 2 (Homeobox protein PBX2)
ref|NP_059491.1| pre B-cell leukemia transcription factor 2 [Mus musculus]
gb|AAH62147.1| Pbx2 protein [Mus musculus]
gb|AAB71193.1| PBX2 [Mus musculus]
Length = 430
Score = 33.9 bits (76), Expect = 4.5
Identities = 40/143 (27%), Positives = 66/143 (46%), Gaps = 15/143 (10%)
Frame = -2
Query: 515 RLGEMRNADTSSLQHQVQAVSPF------VLQQH------APDSLENMLVEIS---SAIS 381
+L ++R+ S L+ QA + F +L++ AP +E M+ I SAI
Sbjct: 164 KLAQIRHIYHSELEKYEQACNEFTTHVMNLLREQSRTRPVAPKEMERMVSIIHRKFSAIQ 223
Query: 380 LLTNQKTLDLIMILNSKRFLDRLVSSLEEKKHHEVKLREGLGDLSVKRMELQNALSSSWP 201
+ Q T + +MIL S RFLD + ++++ + E L + + LS+ +P
Sbjct: 224 MQLKQSTCEAVMILRS-RFLD----ARRKRRNFSKQATEVLNEY------FYSHLSNPYP 272
Query: 200 KQEAAITKTRELKKLCESTLSSV 132
+EA EL K C T+S V
Sbjct: 273 SEEA----KEELAKKCGITVSQV 291
>ref|NP_002577.2| pre-B-cell leukemia transcription factor 2 [Homo sapiens]
gb|AAB47490.1| homeobox PBX2 gene [Homo sapiens]
gb|AAH82261.1| Pre-B-cell leukemia transcription factor 2 [Homo sapiens]
emb|CAI41814.1| pre-B-cell leukemia transcription factor 2 [Homo sapiens]
emb|CAI17539.1| pre-B-cell leukemia transcription factor 2 [Homo sapiens]
emb|CAI18358.1| pre-B-cell leukemia transcription factor 2 [Homo sapiens]
emb|CAA56717.1| PBX2 [Homo sapiens]
sp|P40425|PBX2_HUMAN Pre-B-cell leukemia transcription factor 2 (Homeobox protein PBX2)
(G17 protein)
dbj|BAA05957.1| HOX12 protein [Homo sapiens]
Length = 430
Score = 33.9 bits (76), Expect = 4.5
Identities = 40/143 (27%), Positives = 66/143 (46%), Gaps = 15/143 (10%)
Frame = -2
Query: 515 RLGEMRNADTSSLQHQVQAVSPF------VLQQH------APDSLENMLVEIS---SAIS 381
+L ++R+ S L+ QA + F +L++ AP +E M+ I SAI
Sbjct: 164 KLAQIRHIYHSELEKYEQACNEFTTHVMNLLREQSRTRPVAPKEMERMVSIIHRKFSAIQ 223
Query: 380 LLTNQKTLDLIMILNSKRFLDRLVSSLEEKKHHEVKLREGLGDLSVKRMELQNALSSSWP 201
+ Q T + +MIL S RFLD + ++++ + E L + + LS+ +P
Sbjct: 224 MQLKQSTCEAVMILRS-RFLD----ARRKRRNFSKQATEVLNEY------FYSHLSNPYP 272
Query: 200 KQEAAITKTRELKKLCESTLSSV 132
+EA EL K C T+S V
Sbjct: 273 SEEA----KEELAKKCGITVSQV 291
>ref|XP_874385.1| PREDICTED: similar to Pre-B-cell leukemia transcription factor 2
(Homeobox protein PBX2) (G17 protein) isoform 2 [Bos
taurus]
Length = 430
Score = 33.9 bits (76), Expect = 4.5
Identities = 40/143 (27%), Positives = 66/143 (46%), Gaps = 15/143 (10%)
Frame = -2
Query: 515 RLGEMRNADTSSLQHQVQAVSPF------VLQQH------APDSLENMLVEIS---SAIS 381
+L ++R+ S L+ QA + F +L++ AP +E M+ I SAI
Sbjct: 164 KLAQIRHIYHSELEKYEQACNEFTTHVMNLLREQSRTRPVAPKEMERMVSIIHRKFSAIQ 223
Query: 380 LLTNQKTLDLIMILNSKRFLDRLVSSLEEKKHHEVKLREGLGDLSVKRMELQNALSSSWP 201
+ Q T + +MIL S RFLD + ++++ + E L + + LS+ +P
Sbjct: 224 MQLKQSTCEAVMILRS-RFLD----ARRKRRNFSKQATEVLNEY------FYSHLSNPYP 272
Query: 200 KQEAAITKTRELKKLCESTLSSV 132
+EA EL K C T+S V
Sbjct: 273 SEEA----KEELAKKCGITVSQV 291
>ref|XP_588473.2| PREDICTED: similar to Golgi autoantigen, golgin subfamily A member
1 (Golgin-97) isoform 1 [Bos taurus]
Length = 758
Score = 33.9 bits (76), Expect = 4.5
Identities = 42/182 (23%), Positives = 77/182 (42%), Gaps = 26/182 (14%)
Frame = -2
Query: 623 RAQSQMIAEDRSLLLEKEYR--NNILDDLLEVKSFLTQRLGEMRNADTSSLQHQVQAVSP 450
+A +AE +L L ++ + + +D L + K FLT +L EM+N + Q + +
Sbjct: 114 QANRARMAEGLALALARKDQEWSEKVDQLEKDKRFLTAQLQEMKNQSLNLFQRRDEMDEL 173
Query: 449 FVLQQHAPDSLENMLVEISSAIS--------------------LLTNQKTLDLIMILNSK 330
QQ +++ML++ ++ + ++Q +LDL L
Sbjct: 174 EGFQQQELSKVKHMLLKKEESLGKMEQELEARTRELSRTQEELVTSSQISLDLSQKLEE- 232
Query: 329 RFLDRLVSSLEEKKHHEVKLREGLGD----LSVKRMELQNALSSSWPKQEAAITKTRELK 162
L R S+LEE++ H + G + L K ELQ + + +T+E +
Sbjct: 233 --LQRHYSALEEQRDHVTASKTGAENKITVLEQKEQELQAFIQQLSIDLQKVTAETQEKE 290
Query: 161 KL 156
KL
Sbjct: 291 KL 292
>dbj|BAE35238.1| unnamed protein product [Mus musculus]
Length = 430
Score = 33.9 bits (76), Expect = 4.5
Identities = 40/143 (27%), Positives = 66/143 (46%), Gaps = 15/143 (10%)
Frame = -2
Query: 515 RLGEMRNADTSSLQHQVQAVSPF------VLQQH------APDSLENMLVEIS---SAIS 381
+L ++R+ S L+ QA + F +L++ AP +E M+ I SAI
Sbjct: 164 KLAQIRHIYHSELEKYEQACNEFTTHVMNLLREQSRTRPVAPKEMERMVSIIHRKFSAIQ 223
Query: 380 LLTNQKTLDLIMILNSKRFLDRLVSSLEEKKHHEVKLREGLGDLSVKRMELQNALSSSWP 201
+ Q T + +MIL S RFLD + ++++ + E L + + LS+ +P
Sbjct: 224 MQLKQSTCEAVMILRS-RFLD----ARRKRRNFSKQATEVLNEY------FYSHLSNPYP 272
Query: 200 KQEAAITKTRELKKLCESTLSSV 132
+EA EL K C T+S V
Sbjct: 273 SEEA----KEELAKKCGITVSQV 291
>ref|XP_628300.1| hypothetical protein cgd7_1150 [Cryptosporidium parvum Iowa II]
gb|EAK90582.1| uncharacterized conserved protein [Cryptosporidium parvum]
Length = 1191
Score = 33.9 bits (76), Expect = 4.5
Identities = 25/109 (22%), Positives = 55/109 (50%), Gaps = 10/109 (9%)
Frame = -2
Query: 362 TLDLIMILNSKRFLDRLVSSLEEKKHHEVKLRE-----GLGDLSVKRMELQNALSSSWPK 198
TLD++ L + F+ S ++K E ++E + D+S+ +EL N++SS+ +
Sbjct: 586 TLDVVPSL-FQSFITNFSSFFQQKDDQEFLIQEIYRRKNIKDISLIEIELMNSISSNLSQ 644
Query: 197 QEAAITKTRELKKLCES-----TLSSVFDGRPVYIIGEINTLLSSSVSQ 66
++ I + L + C+S S + + +Y + NTL+ + +++
Sbjct: 645 RQKLINQRSFLHRRCKSIPSHWKYSQEDENKVLYDLESSNTLMKACINE 693
>ref|XP_869338.1| PREDICTED: similar to Golgi autoantigen, golgin subfamily A member
1 (Golgin-97) isoform 2 [Bos taurus]
Length = 766
Score = 33.9 bits (76), Expect = 4.5
Identities = 42/182 (23%), Positives = 77/182 (42%), Gaps = 26/182 (14%)
Frame = -2
Query: 623 RAQSQMIAEDRSLLLEKEYR--NNILDDLLEVKSFLTQRLGEMRNADTSSLQHQVQAVSP 450
+A +AE +L L ++ + + +D L + K FLT +L EM+N + Q + +
Sbjct: 114 QANRARMAEGLALALARKDQEWSEKVDQLEKDKRFLTAQLQEMKNQSLNLFQRRDEMDEL 173
Query: 449 FVLQQHAPDSLENMLVEISSAIS--------------------LLTNQKTLDLIMILNSK 330
QQ +++ML++ ++ + ++Q +LDL L
Sbjct: 174 EGFQQQELSKVKHMLLKKEESLGKMEQELEARTRELSRTQEELVTSSQISLDLSQKLEE- 232
Query: 329 RFLDRLVSSLEEKKHHEVKLREGLGD----LSVKRMELQNALSSSWPKQEAAITKTRELK 162
L R S+LEE++ H + G + L K ELQ + + +T+E +
Sbjct: 233 --LQRHYSALEEQRDHVTASKTGAENKITVLEQKEQELQAFIQQLSIDLQKVTAETQEKE 290
Query: 161 KL 156
KL
Sbjct: 291 KL 292
>ref|XP_518378.1| PREDICTED: similar to Pre-B-cell leukemia transcription factor-2
(Homeobox protein PBX2) (G17 protein) [Pan troglodytes]
Length = 413
Score = 33.9 bits (76), Expect = 4.5
Identities = 40/143 (27%), Positives = 66/143 (46%), Gaps = 15/143 (10%)
Frame = -2
Query: 515 RLGEMRNADTSSLQHQVQAVSPF------VLQQH------APDSLENMLVEIS---SAIS 381
+L ++R+ S L+ QA + F +L++ AP +E M+ I SAI
Sbjct: 147 KLAQIRHIYHSELEKYEQACNEFTTHVMNLLREQSRTRPVAPKEMERMVSIIHRKFSAIQ 206
Query: 380 LLTNQKTLDLIMILNSKRFLDRLVSSLEEKKHHEVKLREGLGDLSVKRMELQNALSSSWP 201
+ Q T + +MIL S RFLD + ++++ + E L + + LS+ +P
Sbjct: 207 MQLKQSTCEAVMILRS-RFLD----ARRKRRNFSKQATEVLNEY------FYSHLSNPYP 255
Query: 200 KQEAAITKTRELKKLCESTLSSV 132
+EA EL K C T+S V
Sbjct: 256 SEEA----KEELAKKCGITVSQV 274
>ref|XP_877778.1| PREDICTED: similar to golgin 97 isoform 3 [Bos taurus]
Length = 733
Score = 33.9 bits (76), Expect = 4.5
Identities = 42/182 (23%), Positives = 77/182 (42%), Gaps = 26/182 (14%)
Frame = -2
Query: 623 RAQSQMIAEDRSLLLEKEYR--NNILDDLLEVKSFLTQRLGEMRNADTSSLQHQVQAVSP 450
+A +AE +L L ++ + + +D L + K FLT +L EM+N + Q + +
Sbjct: 89 QANRARMAEGLALALARKDQEWSEKVDQLEKDKRFLTAQLQEMKNQSLNLFQRRDEMDEL 148
Query: 449 FVLQQHAPDSLENMLVEISSAIS--------------------LLTNQKTLDLIMILNSK 330
QQ +++ML++ ++ + ++Q +LDL L
Sbjct: 149 EGFQQQELSKVKHMLLKKEESLGKMEQELEARTRELSRTQEELVTSSQISLDLSQKLEE- 207
Query: 329 RFLDRLVSSLEEKKHHEVKLREGLGD----LSVKRMELQNALSSSWPKQEAAITKTRELK 162
L R S+LEE++ H + G + L K ELQ + + +T+E +
Sbjct: 208 --LQRHYSALEEQRDHVTASKTGAENKITVLEQKEQELQAFIQQLSIDLQKVTAETQEKE 265
Query: 161 KL 156
KL
Sbjct: 266 KL 267
>dbj|BAE24825.1| unnamed protein product [Mus musculus]
Length = 348
Score = 33.9 bits (76), Expect = 4.5
Identities = 40/143 (27%), Positives = 66/143 (46%), Gaps = 15/143 (10%)
Frame = -2
Query: 515 RLGEMRNADTSSLQHQVQAVSPF------VLQQH------APDSLENMLVEIS---SAIS 381
+L ++R+ S L+ QA + F +L++ AP +E M+ I SAI
Sbjct: 82 KLAQIRHIYHSELEKYEQACNEFTTHVMNLLREQSRTRPVAPKEMERMVSIIHRKFSAIQ 141
Query: 380 LLTNQKTLDLIMILNSKRFLDRLVSSLEEKKHHEVKLREGLGDLSVKRMELQNALSSSWP 201
+ Q T + +MIL S RFLD + ++++ + E L + + LS+ +P
Sbjct: 142 MQLKQSTCEAVMILRS-RFLD----ARRKRRNFSKQATEVLNEY------FYSHLSNPYP 190
Query: 200 KQEAAITKTRELKKLCESTLSSV 132
+EA EL K C T+S V
Sbjct: 191 SEEA----KEELAKKCGITVSQV 209
>ref|XP_807413.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
gb|EAN85562.1| hypothetical protein, conserved [Trypanosoma cruzi]
Length = 1028
Score = 33.9 bits (76), Expect = 4.5
Identities = 40/148 (27%), Positives = 69/148 (46%), Gaps = 8/148 (5%)
Frame = -2
Query: 581 LEKEYRNNILDDLLEVKSFLTQRLGEMRNADTSSLQHQVQAVSPFVLQQHAPDSLENMLV 402
LEK +R +I D L+ + L ++L E+R L +V V V +QH + + M
Sbjct: 305 LEKRWRTSI-DQALKDEEELQRQLLELRERHGQRLSSEVARVEATVREQHQREE-KQMEG 362
Query: 401 EISSAISLLTNQKTLDLI---MILNSKRFLDRLVSSLEE--KKHHEVK---LREGLGDLS 246
E +++ L ++ + + + L K D V L+E +KHH + +RE D
Sbjct: 363 ESLASLKRLEDEVSAEFLKKKAELQQKSLAD--VQRLKEAAEKHHRAEVAAMRENHADRE 420
Query: 245 VKRMELQNALSSSWPKQEAAITKTRELK 162
K E + ++S K+ ++ T ELK
Sbjct: 421 KKVTESEKKIASIRAKERESVA-TIELK 447
>ref|XP_861016.1| PREDICTED: similar to Pre-B-cell leukemia transcription factor-2
(Homeobox protein PBX2) (G17 protein) isoform 2 [Canis
familiaris]
Length = 435
Score = 33.9 bits (76), Expect = 4.5
Identities = 40/143 (27%), Positives = 66/143 (46%), Gaps = 15/143 (10%)
Frame = -2
Query: 515 RLGEMRNADTSSLQHQVQAVSPF------VLQQH------APDSLENMLVEIS---SAIS 381
+L ++R+ S L+ QA + F +L++ AP +E M+ I SAI
Sbjct: 160 KLAQIRHIYHSELEKYEQACNEFTTHVMNLLREQSRTRPVAPKEMERMVSIIHRKFSAIQ 219
Query: 380 LLTNQKTLDLIMILNSKRFLDRLVSSLEEKKHHEVKLREGLGDLSVKRMELQNALSSSWP 201
+ Q T + +MIL S RFLD + ++++ + E L + + LS+ +P
Sbjct: 220 MQLKQSTCEAVMILRS-RFLD----ARRKRRNFSKQATEVLNEY------FYSHLSNPYP 268
Query: 200 KQEAAITKTRELKKLCESTLSSV 132
+EA EL K C T+S V
Sbjct: 269 SEEA----KEELAKKCGITVSQV 287
>emb|CAI17540.1| pre-B-cell leukemia transcription factor 2 [Homo sapiens]
Length = 349
Score = 33.9 bits (76), Expect = 4.5
Identities = 40/143 (27%), Positives = 66/143 (46%), Gaps = 15/143 (10%)
Frame = -2
Query: 515 RLGEMRNADTSSLQHQVQAVSPF------VLQQH------APDSLENMLVEIS---SAIS 381
+L ++R+ S L+ QA + F +L++ AP +E M+ I SAI
Sbjct: 164 KLAQIRHIYHSELEKYEQACNEFTTHVMNLLREQSRTRPVAPKEMERMVSIIHRKFSAIQ 223
Query: 380 LLTNQKTLDLIMILNSKRFLDRLVSSLEEKKHHEVKLREGLGDLSVKRMELQNALSSSWP 201
+ Q T + +MIL S RFLD + ++++ + E L + + LS+ +P
Sbjct: 224 MQLKQSTCEAVMILRS-RFLD----ARRKRRNFSKQATEVLNEY------FYSHLSNPYP 272
Query: 200 KQEAAITKTRELKKLCESTLSSV 132
+EA EL K C T+S V
Sbjct: 273 SEEA----KEELAKKCGITVSQV 291
>emb|CAI41815.1| pre-B-cell leukemia transcription factor 2 [Homo sapiens]
emb|CAI18359.1| pre-B-cell leukemia transcription factor 2 [Homo sapiens]
gb|AAP88825.1| pre-B-cell leukemia transcription factor 2 [Homo sapiens]
Length = 349
Score = 33.9 bits (76), Expect = 4.5
Identities = 40/143 (27%), Positives = 66/143 (46%), Gaps = 15/143 (10%)
Frame = -2
Query: 515 RLGEMRNADTSSLQHQVQAVSPF------VLQQH------APDSLENMLVEIS---SAIS 381
+L ++R+ S L+ QA + F +L++ AP +E M+ I SAI
Sbjct: 164 KLAQIRHIYHSELEKYEQACNEFTTHVMNLLREQSRTRPVAPKEMERMVSIIHRKFSAIQ 223
Query: 380 LLTNQKTLDLIMILNSKRFLDRLVSSLEEKKHHEVKLREGLGDLSVKRMELQNALSSSWP 201
+ Q T + +MIL S RFLD + ++++ + E L + + LS+ +P
Sbjct: 224 MQLKQSTCEAVMILRS-RFLD----ARRKRRNFSKQATEVLNEY------FYSHLSNPYP 272
Query: 200 KQEAAITKTRELKKLCESTLSSV 132
+EA EL K C T+S V
Sbjct: 273 SEEA----KEELAKKCGITVSQV 291
>ref|XP_668137.1| RAD50 DNA repair protein-related [Cryptosporidium hominis TU502]
gb|EAL37903.1| RAD50 DNA repair protein-related [Cryptosporidium hominis]
Length = 585
Score = 33.9 bits (76), Expect = 4.5
Identities = 44/169 (26%), Positives = 78/169 (46%), Gaps = 16/169 (9%)
Frame = -2
Query: 605 IAEDRSLLLEKEYRNNILDDLLEVKSFLTQRLGEMRNADT--SSLQHQVQAVSPFVLQQH 432
I E ++LL+ Y N L+D LE+ S L E++N ++ +LQ+Q H
Sbjct: 299 IKEMENVLLKSNY--NQLEDELEINSLLHNEFEEIQNLNSKLENLQNQT---------NH 347
Query: 431 APDSLENMLVEISSAISLLTNQKTLDLIMILNSKR---------FLDRLVSSLEE----- 294
++LEN +++S++ T +K L I K+ FL+ + +L E
Sbjct: 348 IKNNLENF--KVNSSVDEFTQRKNEVLRKIAEIKKLTDLKEILLFLENSLVALNEQLTNY 405
Query: 293 KKHHEVKLREGLGDLSVKRMELQNALSSSWPKQEAAITKTRELKKLCES 147
K + +++ + L V + E+ ++L + K E K E KKL +S
Sbjct: 406 KGLNWESVQKAISTLEVNKTEIDSSLVNL--KAELNF-KIEEKKKLFDS 451
>ref|XP_584966.2| PREDICTED: similar to Pre-B-cell leukemia transcription factor 2
(Homeobox protein PBX2) (G17 protein) isoform 1 [Bos
taurus]
Length = 349
Score = 33.9 bits (76), Expect = 4.5
Identities = 40/143 (27%), Positives = 66/143 (46%), Gaps = 15/143 (10%)
Frame = -2
Query: 515 RLGEMRNADTSSLQHQVQAVSPF------VLQQH------APDSLENMLVEIS---SAIS 381
+L ++R+ S L+ QA + F +L++ AP +E M+ I SAI
Sbjct: 164 KLAQIRHIYHSELEKYEQACNEFTTHVMNLLREQSRTRPVAPKEMERMVSIIHRKFSAIQ 223
Query: 380 LLTNQKTLDLIMILNSKRFLDRLVSSLEEKKHHEVKLREGLGDLSVKRMELQNALSSSWP 201
+ Q T + +MIL S RFLD + ++++ + E L + + LS+ +P
Sbjct: 224 MQLKQSTCEAVMILRS-RFLD----ARRKRRNFSKQATEVLNEY------FYSHLSNPYP 272
Query: 200 KQEAAITKTRELKKLCESTLSSV 132
+EA EL K C T+S V
Sbjct: 273 SEEA----KEELAKKCGITVSQV 291
>ref|XP_850252.1| PREDICTED: similar to Pre-B-cell leukemia transcription factor-2
(Homeobox protein PBX2) (G17 protein) isoform 1 [Canis
familiaris]
Length = 426
Score = 33.9 bits (76), Expect = 4.5
Identities = 40/143 (27%), Positives = 66/143 (46%), Gaps = 15/143 (10%)
Frame = -2
Query: 515 RLGEMRNADTSSLQHQVQAVSPF------VLQQH------APDSLENMLVEIS---SAIS 381
+L ++R+ S L+ QA + F +L++ AP +E M+ I SAI
Sbjct: 160 KLAQIRHIYHSELEKYEQACNEFTTHVMNLLREQSRTRPVAPKEMERMVSIIHRKFSAIQ 219
Query: 380 LLTNQKTLDLIMILNSKRFLDRLVSSLEEKKHHEVKLREGLGDLSVKRMELQNALSSSWP 201
+ Q T + +MIL S RFLD + ++++ + E L + + LS+ +P
Sbjct: 220 MQLKQSTCEAVMILRS-RFLD----ARRKRRNFSKQATEVLNEY------FYSHLSNPYP 268
Query: 200 KQEAAITKTRELKKLCESTLSSV 132
+EA EL K C T+S V
Sbjct: 269 SEEA----KEELAKKCGITVSQV 287
>ref|NP_069370.1| hypothetical protein AF0534 [Archaeoglobus fulgidus DSM 4304]
gb|AAB90700.1| conserved hypothetical protein [Archaeoglobus fulgidus DSM 4304]
Length = 319
Score = 33.5 bits (75), Expect = 5.8
Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Frame = -2
Query: 398 ISSAISLLTNQKTLDLIMIL--NSKRFLDRLVSSLEEKKHHEVKLREGLGDLSVKRMELQ 225
+SS + L + LD+ ++L + +R+ D E KKHH +LRE L L+ + +
Sbjct: 203 LSSYLQSLEKVENLDVKLVLPGHRRRWNDLKTRVEEIKKHHSKRLREALSALNTPKTAWE 262
Query: 224 NALSSSW 204
A S +W
Sbjct: 263 VAPSITW 269
>ref|ZP_01133352.1| putative orphan protein [Pseudoalteromonas tunicata D2]
gb|EAR28751.1| putative orphan protein [Pseudoalteromonas tunicata D2]
Length = 88
Score = 33.5 bits (75), Expect = 5.8
Identities = 19/79 (24%), Positives = 45/79 (56%), Gaps = 4/79 (5%)
Frame = -2
Query: 611 QMIAEDRSLLLEKEYRNNILDDLLEVKSFLTQRLGEMRNADTSSLQH----QVQAVSPFV 444
+ I D +LL ++ +++ L+E K+ L Q + +++ ++ + Q++A+
Sbjct: 10 ERIMSDNTLLQLEQ----LINQLIEQKNKLQQEVSDLKEKNSQLIDENETLQLEAIESDE 65
Query: 443 LQQHAPDSLENMLVEISSA 387
Q+HA +LEN+L+++ +A
Sbjct: 66 KQKHAASTLENLLLKLQNA 84
>ref|NP_972927.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Treponema
denticola ATCC 35405]
gb|AAS12846.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Treponema
denticola ATCC 35405]
sp|Q73K92|CLPB_TREDE Chaperone clpB
Length = 859
Score = 33.5 bits (75), Expect = 5.8
Identities = 23/107 (21%), Positives = 52/107 (48%), Gaps = 7/107 (6%)
Frame = -2
Query: 449 FVLQQHAPDSLENMLVEISSAISLLTNQKTLDLIMILNSKRFLDRLVSSLEEKKHHE--- 279
++ + PD +++ E +S + + + ++L + ++ L + + K ++
Sbjct: 380 YITNRFLPDKAIDLVDEAASRLKMEIESQPVELDQV--ERKILQLNIEKVSIGKENDTAS 437
Query: 278 ----VKLREGLGDLSVKRMELQNALSSSWPKQEAAITKTRELKKLCE 150
+KL E L +LS KR NA+ + W ++A I ++R+ K+ E
Sbjct: 438 KERLLKLEEELAELSSKR----NAMQAQWQNEKARINESRKYKEELE 480
>ref|NP_070387.1| chromosome segregation protein (smc1) [Archaeoglobus fulgidus DSM
4304]
gb|AAB89690.1| chromosome segregation protein (smc1) [Archaeoglobus fulgidus DSM
4304]
Length = 1156
Score = 33.5 bits (75), Expect = 5.8
Identities = 36/153 (23%), Positives = 66/153 (43%), Gaps = 8/153 (5%)
Frame = -2
Query: 602 AEDRSLLLEKEYRNNILDDLLEVKSFLTQRLGEMRNADTSSLQHQVQAVSPFVLQQHAPD 423
AE R +L+ +E LLE + L+ ++ E++ +A S + D
Sbjct: 657 AEKRGILVSRE--------LLEKERMLSDKIYELQREKEGLFAELNRAESLRKQYKDEVD 708
Query: 422 SLENMLVEISSAISLL-----TNQKTLDLIM--ILNSKRFLDRLVSSLEEKKHHEVKLRE 264
L M+ E+ + ISLL T ++ + I R + +SSL++ ++ E
Sbjct: 709 RLTGMISELRNRISLLDEKIRTESGRIEELREKISQKSREKENYISSLKDYNSKLAEMEE 768
Query: 263 GLGDLSVKRMELQNAL-SSSWPKQEAAITKTRE 168
+G+L + E++ L S PK + K +E
Sbjct: 769 AIGELEAEIEEIERMLRGSEVPKIVEELDKIKE 801
>pir||A64505 P115 homolog - Methanococcus jannaschii
Length = 1169
Score = 33.5 bits (75), Expect = 5.8
Identities = 30/144 (20%), Positives = 71/144 (49%), Gaps = 7/144 (4%)
Frame = -2
Query: 572 EYRNNILDDLLEVKSF-----LTQRLGEMR--NADTSSLQHQVQAVSPFVLQQHAPDSLE 414
E R I+++L E +S + + GE++ + + L++++ V + P
Sbjct: 781 ERREKIINELKEYESDENLKRMNEIEGELKILEKEKAKLKNEIDKGLTLVKEILIPK--- 837
Query: 413 NMLVEISSAISLLTNQKTLDLIMILNSKRFLDRLVSSLEEKKHHEVKLREGLGDLSVKRM 234
+ E++ +S L N+K + I K +++ +S LEEK+ +L + L +L+ K+
Sbjct: 838 --IEELNKKVSELINKKVILEKNISFYKESIEKNLSILEEKRKRYEELAKNLKELTEKKE 895
Query: 233 ELQNALSSSWPKQEAAITKTRELK 162
+L+ + + ++ + K R+++
Sbjct: 896 QLEKEIETLERERREILRKVRDIE 919
>gb|ABC59903.1| hemagglutinin [Influenza A virus (A/sharp-tailed
sandpiper/Australia/6/2004(H11N9))]
Length = 565
Score = 33.5 bits (75), Expect = 5.8
Identities = 28/111 (25%), Positives = 48/111 (43%), Gaps = 2/111 (1%)
Frame = -2
Query: 599 EDRSLLLEKEYRNNILDDLLEVKSFLTQRLGEMRNADTSSLQHQVQAVSPFV--LQQHAP 426
E + +KE +D + + + R+ N + S+QH+ + + L +H
Sbjct: 372 EGTGIAADKESTQKAIDQITSKVNNIVDRM----NTNFESVQHEFSEIEERINQLSKHVD 427
Query: 425 DSLENMLVEISSAISLLTNQKTLDLIMILNSKRFLDRLVSSLEEKKHHEVK 273
DS+ ++ + + LL N+KTLDL D V SL EK +K
Sbjct: 428 DSVVDIWSYNAQLLVLLENEKTLDL---------HDSNVRSLHEKVRRMLK 469
>sp|Q59037|SMC_METJA Chromosome partition protein smc homolog
gb|AAB99663.1| chromosome segretation protein (smc1) [Methanocaldococcus jannaschii
DSM 2661]
ref|NP_248653.1| chromosome segretation protein (smc1) [Methanocaldococcus jannaschii
DSM 2661]
Length = 1169
Score = 33.5 bits (75), Expect = 5.8
Identities = 30/144 (20%), Positives = 71/144 (49%), Gaps = 7/144 (4%)
Frame = -2
Query: 572 EYRNNILDDLLEVKSF-----LTQRLGEMR--NADTSSLQHQVQAVSPFVLQQHAPDSLE 414
E R I+++L E +S + + GE++ + + L++++ V + P
Sbjct: 781 ERREKIINELKEYESDENLKRMNEIEGELKILEKEKAKLKNEIDKGLTLVKEILIPK--- 837
Query: 413 NMLVEISSAISLLTNQKTLDLIMILNSKRFLDRLVSSLEEKKHHEVKLREGLGDLSVKRM 234
+ E++ +S L N+K + I K +++ +S LEEK+ +L + L +L+ K+
Sbjct: 838 --IEELNKKVSELINKKVILEKNISFYKESIEKNLSILEEKRKRYEELAKNLKELTEKKE 895
Query: 233 ELQNALSSSWPKQEAAITKTRELK 162
+L+ + + ++ + K R+++
Sbjct: 896 QLEKEIETLERERREILRKVRDIE 919
>emb|CAG76243.1| ClpB protein (heat shock protein f84.1) [Erwinia carotovora subsp.
atroseptica SCRI1043]
ref|YP_051434.1| ClpB protein (heat shock protein f84.1) [Erwinia carotovora subsp.
atroseptica SCRI1043]
Length = 858
Score = 33.1 bits (74), Expect = 7.6
Identities = 42/202 (20%), Positives = 75/202 (37%), Gaps = 32/202 (15%)
Frame = -2
Query: 572 EYRNNILDDLLEVKSFLTQRLGEMRNADTSS----------LQHQVQAVSP--------- 450
EYR I D + F + E DT + L H VQ P
Sbjct: 318 EYRQYIEKDAALERRFQKVFVAEPTVEDTIAILRGLKERYELHHHVQITDPAIVAAAMLS 377
Query: 449 --FVLQQHAPDSLENMLVEISSAISLLTNQKTLDLIMILNSKRFLDRLVSSLEEKKHHEV 276
++ + PD +++ E +S+I + + K L DRL + + K +
Sbjct: 378 HRYISDRKLPDKAIDLIDEAASSIRIQIDSKPEPL----------DRLERRIIQLKLEQQ 427
Query: 275 KLREGLGDLSVKRMEL-----------QNALSSSWPKQEAAITKTRELKKLCESTLSSVF 129
L++ + S KR+EL + W ++A++T T+ +K E S+
Sbjct: 428 ALKKESDEASQKRLELLSTELDQKEREYSRQDEEWKAEKASLTGTQNIKASLEQAKISLE 487
Query: 128 DGRPVYIIGEINTLLSSSVSQL 63
R +G ++ L + +L
Sbjct: 488 QARRQGDLGRMSELQYGKIPEL 509
>ref|ZP_00800516.1| Dynamin:GTP-binding protein, HSR1-related [Alkaliphilus
metalliredigenes QYMF]
gb|EAO81454.1| Dynamin:GTP-binding protein, HSR1-related [Alkaliphilus
metalliredigenes QYMF]
Length = 586
Score = 33.1 bits (74), Expect = 7.6
Identities = 31/149 (20%), Positives = 65/149 (43%), Gaps = 4/149 (2%)
Frame = -2
Query: 611 QMIAEDRSLLLEKEYRNNILDDLLEVKSFLTQRLGEMRN---ADTSSLQHQVQAVSPFVL 441
+ + +D+ L K Y N L+E+ S L Q L N +D ++ +V A +
Sbjct: 270 RFLLKDKETYLMKSYGNK----LIEIVSALYQHLDFKTNILISDIEVIEEKVNAFKNRLQ 325
Query: 440 QQHAPDSLENMLVEISSAISLLTNQKTLDLIMILNSKRFLDRLVSSLEEKKHHEVKLREG 261
+ + ++VEI + + +K L+ + +K ++++ + + KH K
Sbjct: 326 ETMSMKKEVQVMVEIELEEIIKSFEKNLEEFKVQQTKNIINKISQAAKGNKHIHSK---E 382
Query: 260 LGDLSVKRMELQ-NALSSSWPKQEAAITK 177
L L +R+EL+ + W Q+ + +
Sbjct: 383 LSQLLNQRLELEIEKAYNDWNSQQEVVIR 411
>gb|EAS07367.1| hypothetical protein TTHERM_00568040 [Tetrahymena thermophila
SB210]
Length = 1028
Score = 33.1 bits (74), Expect = 7.6
Identities = 33/153 (21%), Positives = 69/153 (45%), Gaps = 3/153 (1%)
Frame = -2
Query: 614 SQMIAEDRSLLLEKEYRNNI---LDDLLEVKSFLTQRLGEMRNADTSSLQHQVQAVSPFV 444
SQM + ++ L E+E NN+ + D + KS Q + + S+ Q Q+ V+
Sbjct: 340 SQMPSSEQQQLQEREIHNNLQMDVPDKNQSKSNFEQLMAYTNYKNYSNYQQQLNQVNH-- 397
Query: 443 LQQHAPDSLENMLVEISSAISLLTNQKTLDLIMILNSKRFLDRLVSSLEEKKHHEVKLRE 264
Q+ ++N +V + L+N+ L + S ++L++ S + L +
Sbjct: 398 -QESNDQMIQNEIVGSDLNMQCLSNRSNLSHLNYQGSTQYLNKTKSDGFNHFYKSNMLMK 456
Query: 263 GLGDLSVKRMELQNALSSSWPKQEAAITKTREL 165
L + ++++ Q LS+ ++ A+ RE+
Sbjct: 457 DLEKIQTQKIKAQ--LSNQQGFKQQALISDREM 487
>emb|CAA11228.1| kinesin-related mitotic motor protein [Mus musculus]
Length = 1014
Score = 33.1 bits (74), Expect = 7.6
Identities = 40/155 (25%), Positives = 66/155 (42%), Gaps = 6/155 (3%)
Frame = -2
Query: 614 SQMIAEDRSLLLE-KEYRNNILDDLL-----EVKSFLTQRLGEMRNADTSSLQHQVQAVS 453
S MI E++SL + K ++D+L+ +K+ + + + N + LQH +A S
Sbjct: 565 SDMILEEQSLAAQSKSVLQGLIDELVTDLFTSLKTIVAPSVVSILNIN-KQLQHIFRASS 623
Query: 452 PFVLQQHAPDSLENMLVEISSAISLLTNQKTLDLIMILNSKRFLDRLVSSLEEKKHHEVK 273
+ +E+ EI S +S+L N N + VSSL E +
Sbjct: 624 TVA------EKVEDQKREIDSFLSILCN----------NLHELRENTVSSLVESQKLCGD 667
Query: 272 LREGLGDLSVKRMELQNALSSSWPKQEAAITKTRE 168
L E L + + LSSSW ++ A+ K E
Sbjct: 668 LTEDLKTIKETHSQELCQLSSSWAERFCALEKKYE 702
>gb|AAH60670.1| Kinesin family member 11 [Mus musculus]
ref|NP_034745.1| kinesin family member 11 [Mus musculus]
Length = 1052
Score = 33.1 bits (74), Expect = 7.6
Identities = 40/155 (25%), Positives = 66/155 (42%), Gaps = 6/155 (3%)
Frame = -2
Query: 614 SQMIAEDRSLLLE-KEYRNNILDDLL-----EVKSFLTQRLGEMRNADTSSLQHQVQAVS 453
S MI E++SL + K ++D+L+ +K+ + + + N + LQH +A S
Sbjct: 603 SDMILEEQSLAAQSKSVLQGLIDELVTDLFTSLKTIVAPSVVSILNIN-KQLQHIFRASS 661
Query: 452 PFVLQQHAPDSLENMLVEISSAISLLTNQKTLDLIMILNSKRFLDRLVSSLEEKKHHEVK 273
+ +E+ EI S +S+L N N + VSSL E +
Sbjct: 662 TVA------EKVEDQKREIDSFLSILCN----------NLHELRENTVSSLVESQKLCGD 705
Query: 272 LREGLGDLSVKRMELQNALSSSWPKQEAAITKTRE 168
L E L + + LSSSW ++ A+ K E
Sbjct: 706 LTEDLKTIKETHSQELCQLSSSWAERFCALEKKYE 740
>dbj|BAD85206.1| chromosome segregation ATPase [Thermococcus kodakarensis KOD1]
ref|YP_183430.1| chromosome segregation ATPase [Thermococcus kodakarensis KOD1]
Length = 1189
Score = 32.7 bits (73), Expect = 9.9
Identities = 34/118 (28%), Positives = 51/118 (43%), Gaps = 22/118 (18%)
Frame = -2
Query: 419 LENMLVEISSAISLLTN-----QKTLDLIM---------ILNSKRFLDRLVSSLEEKKHH 282
LEN L E+ S L+ QK LD + I ++R + L +EE K
Sbjct: 699 LENELFELRMKKSELSKDVQVIQKELDSYLAEDRSLKEEIEENERLISELEKRIEESKGE 758
Query: 281 EVKLREGLGDLSVKRMELQNALSSSWPKQ--------EAAITKTRELKKLCESTLSSV 132
KLR + L KR +++ AL + ++ EA I+K +E ES L S+
Sbjct: 759 MAKLRGRIERLEKKREKIKKALENPEARELNSKIREVEAEISKLKEELSRVESKLESL 816
>emb|CAI44475.1| Cytosol-type hsp70 [Paramecium tetraurelia]
Length = 646
Score = 32.7 bits (73), Expect = 9.9
Identities = 21/67 (31%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
Frame = -2
Query: 335 SKRFLDRLVSSLEEKKHHEVKLR---EGLGDLSVKRMELQNALSSSWPKQEAAITKTREL 165
SK+ +DRLVS E+ K + K+R E L ++N ++ K + + + R+L
Sbjct: 514 SKQDIDRLVSEAEKFKADDEKIRQRIEAKNSLESTTYHVKNTMNEEQFKDKFTVDEKRQL 573
Query: 164 KKLCEST 144
L EST
Sbjct: 574 TDLIEST 580
>gb|AAO77379.1| conserved hypothetical protein [Bacteroides thetaiotaomicron
VPI-5482]
ref|NP_811185.1| hypothetical protein BT2272 [Bacteroides thetaiotaomicron VPI-5482]
Length = 284
Score = 32.7 bits (73), Expect = 9.9
Identities = 38/169 (22%), Positives = 74/169 (43%), Gaps = 14/169 (8%)
Frame = -2
Query: 602 AEDRSLLLEKEYRNNILDDLLEVKSFLTQRLGEMRNAD-------------TSSLQHQVQ 462
AE+ SLL+E RN LDD++ + + + ++ A+ ++S + Q+
Sbjct: 28 AENDSLLMELTQRNAELDDMMGTFNEVQEGFRKINAAESRVDLQRGTITENSASAKQQIA 87
Query: 461 AVSPFVLQQHAPDSLENMLVEISSAISLLTNQKTLDLIMILNSKRFLDRLVSSLEEKKHH 282
+ F+ +Q +E +I+ + L N K M K+ ++ L + L+ K+
Sbjct: 88 SDIEFISKQ-----MEENKAQIAKLEAQLKNSKYNSTQM----KKAVEALTAELKAKQQR 138
Query: 281 EVKLREGLGDLSVKRMELQNALSS-SWPKQEAAITKTRELKKLCESTLS 138
+L+ L +++ EL A+S S K+ A + K + E S
Sbjct: 139 IEELQTELASKNIRIQELDAAVSDLSAAKESLAAENEAKAKTVAEQDKS 187
>ref|XP_639380.1| hypothetical protein DDB0205012 [Dictyostelium discoideum]
gb|EAL66022.1| hypothetical protein DDB0205012 [Dictyostelium discoideum]
Length = 400
Score = 32.7 bits (73), Expect = 9.9
Identities = 22/72 (30%), Positives = 37/72 (51%)
Frame = -2
Query: 479 LQHQVQAVSPFVLQQHAPDSLENMLVEISSAISLLTNQKTLDLIMILNSKRFLDRLVSSL 300
L+H +A+ F + S +++L+E++ A SLL +QK + K D+L
Sbjct: 161 LKHFEEAIQDFKHLLKSDPSNKDILIELNKATSLLKDQKEKE-----KQKEIDDKLKKEK 215
Query: 299 EEKKHHEVKLRE 264
EEK+ E K +E
Sbjct: 216 EEKEEKERKEKE 227
>emb|CAJ19345.1| FIMBRIATA-like protein [Triticum aestivum]
Length = 473
Score = 32.7 bits (73), Expect = 9.9
Identities = 16/41 (39%), Positives = 24/41 (58%)
Frame = +2
Query: 488 CLHSSSPLSVESKMILPRVNHPEYYSYILSPATNFYLQLSF 610
C+H + P+ + S RV+H +YS+ SPATN Y + F
Sbjct: 133 CMHLAKPVKLHS-----RVDHHLFYSFGFSPATNEYKIMHF 168
>emb|CAC10189.1| Bcs1 protein [Kluyveromyces lactis]
Length = 449
Score = 32.7 bits (73), Expect = 9.9
Identities = 30/140 (21%), Positives = 60/140 (42%)
Frame = -2
Query: 497 NADTSSLQHQVQAVSPFVLQQHAPDSLENMLVEISSAISLLTNQKTLDLIMILNSKRFLD 318
+ +T+ LQH +VS V + + N L+ A L+ +++ + I N F
Sbjct: 106 SVETNYLQHNNGSVSTEV---NFVPGVGNHLIRYKGAFMLIKRERSGQIANITNGTPFET 162
Query: 317 RLVSSLEEKKHHEVKLREGLGDLSVKRMELQNALSSSWPKQEAAITKTRELKKLCESTLS 138
+++L +H +L DL+VKR + + +SW + + + + L L
Sbjct: 163 VKLTTLYRDRHLFQELLMEAKDLAVKRQTGKTVIYTSWANEWRPFGQPKAKRNLKSVILD 222
Query: 137 SVFDGRPVYIIGEINTLLSS 78
+G I+ ++N L +
Sbjct: 223 ---NGLKESILNDVNDFLQN 239
>emb|CAH69074.1| novel protein similar to vertebrate protein tyrosine phosphatase
receptor type f polypeptide (PTPRF) interacting protein
(liprin) alpha 1 (PPFIA1) [Danio rerio]
Length = 117
Score = 32.7 bits (73), Expect = 9.9
Identities = 18/48 (37%), Positives = 28/48 (58%)
Frame = -2
Query: 320 DRLVSSLEEKKHHEVKLREGLGDLSVKRMELQNALSSSWPKQEAAITK 177
DRL+ +L E + ++ L D+ R LQ LSS+ P++ AA+TK
Sbjct: 43 DRLLDTLRETQESLALAQQHLQDVIYDRDSLQRQLSSALPQEFAALTK 90
>gb|AAM18882.1| unknown [Branchiostoma floridae]
Length = 319
Score = 32.7 bits (73), Expect = 9.9
Identities = 38/143 (26%), Positives = 63/143 (44%), Gaps = 15/143 (10%)
Frame = -2
Query: 515 RLGEMRNADTSSLQHQVQAVSPFV------------LQQHAPDSLENMLVEIS---SAIS 381
+L ++R + L+ QA + F ++ AP +E M+ I SAI
Sbjct: 68 KLAQIRQIYHTELEKYEQACNEFTTHVVNLLREQSQIRPIAPKEIERMISIIRKKFSAIQ 127
Query: 380 LLTNQKTLDLIMILNSKRFLDRLVSSLEEKKHHEVKLREGLGDLSVKRMELQNALSSSWP 201
+ Q T + IMIL S RFLD + ++++ + E L + + LS+ +P
Sbjct: 128 IQLKQSTCEAIMILRS-RFLD----ARRKRRNFSKQATEVLNEY------FYSHLSNPYP 176
Query: 200 KQEAAITKTRELKKLCESTLSSV 132
+EA EL + C T+S V
Sbjct: 177 SEEA----KEELARKCGITVSQV 195
>gb|AAA24422.1| ATP-dependent protease binding subunit [Escherichia coli]
Length = 857
Score = 32.7 bits (73), Expect = 9.9
Identities = 40/202 (19%), Positives = 76/202 (37%), Gaps = 32/202 (15%)
Frame = -2
Query: 572 EYRNNILDDLLEVKSFLTQRLGEMRNADTSS----------LQHQVQAVSP--------- 450
EYR I D + F + E DT + L H VQ P
Sbjct: 318 EYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLS 377
Query: 449 --FVLQQHAPDSLENMLVEISSAISLLTNQKTLDLIMILNSKRFLDRLVSSLEEKKHHEV 276
++ + PD +++ E +S+I + + K +L DRL + + K +
Sbjct: 378 HRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEEL----------DRLDRRIIQLKLEQQ 427
Query: 275 KLREGLGDLSVKRMELQN-----------ALSSSWPKQEAAITKTRELKKLCESTLSSVF 129
L + + S KR+++ N L W ++A+++ T+ +K E ++
Sbjct: 428 ALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIE 487
Query: 128 DGRPVYIIGEINTLLSSSVSQL 63
R V + ++ L + +L
Sbjct: 488 QARRVGDLARMSELQYGKIPEL 509
>dbj|BAA16476.1| protein disaggregation chaperone [Escherichia coli W3110]
gb|AAC75641.1| protein disaggregation chaperone [Escherichia coli K12]
ref|YP_311570.1| heat shock protein [Shigella sonnei Ss046]
ref|AP_003174.1| protein disaggregation chaperone [Escherichia coli W3110]
ref|YP_408992.1| heat shock protein [Shigella boydii Sb227]
dbj|BAB36878.1| heat shock protein [Escherichia coli O157:H7]
ref|NP_417083.1| ATP-dependent protease, Hsp 100, part of multi-chaperone system
with DnaK, DnaJ, and GrpE [Escherichia coli K12]
ref|NP_311482.1| heat shock protein [Escherichia coli O157:H7]
sp|P63284|CLPB_ECOLI Chaperone clpB (Heat-shock protein F84.1)
sp|P63286|CLPB_ECOL6 Chaperone clpB
sp|P63285|CLPB_ECO57 Chaperone clpB
ref|ZP_00735640.1| COG0542: ATPases with chaperone activity, ATP-binding subunit
[Escherichia coli 53638]
ref|ZP_00729487.1| COG0542: ATPases with chaperone activity, ATP-binding subunit
[Escherichia coli E22]
ref|ZP_00720150.1| COG0542: ATPases with chaperone activity, ATP-binding subunit
[Escherichia coli F11]
ref|ZP_00714416.1| COG0542: ATPases with chaperone activity, ATP-binding subunit
[Escherichia coli B7A]
ref|ZP_00713224.1| COG0542: ATPases with chaperone activity, ATP-binding subunit
[Escherichia coli E110019]
ref|ZP_00708885.1| COG0542: ATPases with chaperone activity, ATP-binding subunit
[Escherichia coli B171]
ref|ZP_00706677.1| COG0542: ATPases with chaperone activity, ATP-binding subunit
[Escherichia coli HS]
ref|ZP_00700608.1| COG0542: ATPases with chaperone activity, ATP-binding subunit
[Escherichia coli E24377A]
ref|ZP_00923925.1| COG0542: ATPases with chaperone activity, ATP-binding subunit
[Escherichia coli 101-1]
gb|ABB67164.1| heat shock protein [Shigella boydii Sb227]
gb|AAZ89335.1| heat shock protein [Shigella sonnei Ss046]
Length = 857
Score = 32.7 bits (73), Expect = 9.9
Identities = 40/202 (19%), Positives = 76/202 (37%), Gaps = 32/202 (15%)
Frame = -2
Query: 572 EYRNNILDDLLEVKSFLTQRLGEMRNADTSS----------LQHQVQAVSP--------- 450
EYR I D + F + E DT + L H VQ P
Sbjct: 318 EYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLS 377
Query: 449 --FVLQQHAPDSLENMLVEISSAISLLTNQKTLDLIMILNSKRFLDRLVSSLEEKKHHEV 276
++ + PD +++ E +S+I + + K +L DRL + + K +
Sbjct: 378 HRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEEL----------DRLDRRIIQLKLEQQ 427
Query: 275 KLREGLGDLSVKRMELQN-----------ALSSSWPKQEAAITKTRELKKLCESTLSSVF 129
L + + S KR+++ N L W ++A+++ T+ +K E ++
Sbjct: 428 ALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIE 487
Query: 128 DGRPVYIIGEINTLLSSSVSQL 63
R V + ++ L + +L
Sbjct: 488 QARRVGDLARMSELQYGKIPEL 509
>emb|CAF90604.1| unnamed protein product [Tetraodon nigroviridis]
Length = 4089
Score = 32.7 bits (73), Expect = 9.9
Identities = 29/101 (28%), Positives = 53/101 (52%)
Frame = -2
Query: 557 ILDDLLEVKSFLTQRLGEMRNADTSSLQHQVQAVSPFVLQQHAPDSLENMLVEISSAISL 378
+L+ E K+ L +RL + N + SS +V A+ + DSL+ L SSAI
Sbjct: 2156 VLEREKEEKNQLVERLTSVEN-EMSSKDVKVNALKQDL------DSLQEKLALASSAIRQ 2208
Query: 377 LTNQKTLDLIMILNSKRFLDRLVSSLEEKKHHEVKLREGLG 255
++Q + S+ L++L++S++EK+ +L++ LG
Sbjct: 2209 GSDQLGAKELEASASRLQLEKLLASVQEKELDNSRLQQALG 2249
>emb|CAA40846.1| analogue of ATP-dependent protease regulatory subunit [Escherichia
coli]
Length = 594
Score = 32.7 bits (73), Expect = 9.9
Identities = 40/202 (19%), Positives = 76/202 (37%), Gaps = 32/202 (15%)
Frame = -2
Query: 572 EYRNNILDDLLEVKSFLTQRLGEMRNADTSS----------LQHQVQAVSP--------- 450
EYR I D + F + E DT + L H VQ P
Sbjct: 318 EYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLS 377
Query: 449 --FVLQQHAPDSLENMLVEISSAISLLTNQKTLDLIMILNSKRFLDRLVSSLEEKKHHEV 276
++ + PD +++ E +S+I + + K +L DRL + + K +
Sbjct: 378 HRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEEL----------DRLDRRIIQLKLEQQ 427
Query: 275 KLREGLGDLSVKRMELQN-----------ALSSSWPKQEAAITKTRELKKLCESTLSSVF 129
L + + S KR+++ N L W ++A+++ T+ +K E ++
Sbjct: 428 ALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIE 487
Query: 128 DGRPVYIIGEINTLLSSSVSQL 63
R V + ++ L + +L
Sbjct: 488 QARRVGDLARMSELQYGKIPEL 509
>ref|XP_873086.1| PREDICTED: similar to hairy and enhancer of split 3 [Bos taurus]
Length = 213
Score = 32.7 bits (73), Expect = 9.9
Identities = 45/157 (28%), Positives = 67/157 (42%), Gaps = 5/157 (3%)
Frame = -2
Query: 623 RAQSQMIAEDRSLLLEKEYRNNILDDLLEVKSFLTQRLGEMRNADTSSLQHQVQAVSPFV 444
RA+ + E LLEK Y + I LE L + M+ SLQ+ VQ P
Sbjct: 31 RARINVSLEQLKSLLEKHYSHQIRKRKLEKADILELSVKYMK-----SLQNSVQDSRPQT 85
Query: 443 LQQHAPDSLENMLVEISSAISLLTNQKTLDLIMILNSKRFLDRLVSSLEEK----KHHEV 276
P L+N SA+ LT K ++ +S V +LEE+ ++ +
Sbjct: 86 AASREPTILDNP----RSAVRRLTPPKMKSMLYPDSSPG-----VPALEEQARGVENRDC 136
Query: 275 KLREGLGDLSVKRMELQNALSSS-WPKQEAAITKTRE 168
LR G S +E+QN S++ W + A+ KT E
Sbjct: 137 ALRPGDRGTSSHHLEIQNKDSANLWNGYKEAM-KTAE 172
>ref|YP_404365.1| heat shock protein [Shigella dysenteriae Sd197]
gb|ABB62874.1| heat shock protein [Shigella dysenteriae Sd197]
Length = 857
Score = 32.7 bits (73), Expect = 9.9
Identities = 40/202 (19%), Positives = 76/202 (37%), Gaps = 32/202 (15%)
Frame = -2
Query: 572 EYRNNILDDLLEVKSFLTQRLGEMRNADTSS----------LQHQVQAVSP--------- 450
EYR I D + F + E DT + L H VQ P
Sbjct: 318 EYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVVAATLS 377
Query: 449 --FVLQQHAPDSLENMLVEISSAISLLTNQKTLDLIMILNSKRFLDRLVSSLEEKKHHEV 276
++ + PD +++ E +S+I + + K +L DRL + + K +
Sbjct: 378 HRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEEL----------DRLDRRIIQLKLEQQ 427
Query: 275 KLREGLGDLSVKRMELQN-----------ALSSSWPKQEAAITKTRELKKLCESTLSSVF 129
L + + S KR+++ N L W ++A+++ T+ +K E ++
Sbjct: 428 ALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIE 487
Query: 128 DGRPVYIIGEINTLLSSSVSQL 63
R V + ++ L + +L
Sbjct: 488 QARRVGDLARMSELQYGKIPEL 509
>gb|AAP17974.1| heat shock protein [Shigella flexneri 2a str. 2457T]
ref|NP_838164.1| heat shock protein [Shigella flexneri 2a str. 2457T]
sp|Q7UBW5|CLPB_SHIFL Chaperone clpB
Length = 857
Score = 32.7 bits (73), Expect = 9.9
Identities = 40/202 (19%), Positives = 76/202 (37%), Gaps = 32/202 (15%)
Frame = -2
Query: 572 EYRNNILDDLLEVKSFLTQRLGEMRNADTSS----------LQHQVQAVSP--------- 450
EYR I D + F + E DT + L H VQ P
Sbjct: 318 EYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLS 377
Query: 449 --FVLQQHAPDSLENMLVEISSAISLLTNQKTLDLIMILNSKRFLDRLVSSLEEKKHHEV 276
++ + PD +++ E +S+I + + K +L DRL + + K +
Sbjct: 378 HRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEEL----------DRLDRRIIQLKLEQQ 427
Query: 275 KLREGLGDLSVKRMELQN-----------ALSSSWPKQEAAITKTRELKKLCESTLSSVF 129
L + + S KR+++ N L W ++A+++ T+ +K E ++
Sbjct: 428 ALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIE 487
Query: 128 DGRPVYIIGEINTLLSSSVSQL 63
R V + ++ L + +L
Sbjct: 488 QARRVGDLARMSELQYGKIPEL 509
>ref|ZP_00698260.1| COG0542: ATPases with chaperone activity, ATP-binding subunit
[Shigella boydii BS512]
Length = 857
Score = 32.7 bits (73), Expect = 9.9
Identities = 40/202 (19%), Positives = 76/202 (37%), Gaps = 32/202 (15%)
Frame = -2
Query: 572 EYRNNILDDLLEVKSFLTQRLGEMRNADTSS----------LQHQVQAVSP--------- 450
EYR I D + F + E DT + L H VQ P
Sbjct: 318 EYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLS 377
Query: 449 --FVLQQHAPDSLENMLVEISSAISLLTNQKTLDLIMILNSKRFLDRLVSSLEEKKHHEV 276
++ + PD +++ E +S+I + + K +L DRL + + K +
Sbjct: 378 HRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEEL----------DRLDRRIIQLKLEQQ 427
Query: 275 KLREGLGDLSVKRMELQN-----------ALSSSWPKQEAAITKTRELKKLCESTLSSVF 129
L + + S KR+++ N L W ++A+++ T+ +K E ++
Sbjct: 428 ALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIE 487
Query: 128 DGRPVYIIGEINTLLSSSVSQL 63
R V + ++ L + +L
Sbjct: 488 QARRVGDLARMSELQYGKIPEL 509
>dbj|BAC62443.1| putative sensor histidine kinase [Vibrio parahaemolyticus RIMD
2210633]
ref|NP_800610.1| putative sensor histidine kinase [Vibrio parahaemolyticus RIMD
2210633]
Length = 785
Score = 32.7 bits (73), Expect = 9.9
Identities = 27/90 (30%), Positives = 44/90 (48%)
Frame = -2
Query: 614 SQMIAEDRSLLLEKEYRNNILDDLLEVKSFLTQRLGEMRNADTSSLQHQVQAVSPFVLQQ 435
SQ+IAE+ + KE+ ILD + + L L D S ++ + +
Sbjct: 292 SQLIAEETKEPVTKEHIKVILDSGQHLMTILNDIL------DFSKVEENKLEL------E 339
Query: 434 HAPDSLENMLVEISSAISLLTNQKTLDLIM 345
AP LE +L + SAI L ++K++DLI+
Sbjct: 340 KAPFHLEQVLTPVCSAIQPLIDEKSIDLIV 369
>ref|XP_768191.1| myosin heavy chain [Giardia lamblia ATCC 50803]
gb|EAA38037.1| GLP_327_2416_5721 [Giardia lamblia ATCC 50803]
Length = 1101
Score = 32.7 bits (73), Expect = 9.9
Identities = 32/145 (22%), Positives = 65/145 (44%), Gaps = 1/145 (0%)
Frame = -2
Query: 569 YRNNILDDLLEVKSFLTQRLGEMRNADTSSLQHQVQAVSPFVLQQHAPDSLENMLVEISS 390
+R +++DD+ + L + + D + LQ +++AVS A L + ++S
Sbjct: 50 FRQSLVDDMQRREEELKVKSKSLEK-DMNELQRRLEAVS------RAEKRLAKVQRQLSE 102
Query: 389 AISLLTNQKTLDLIMILNSKRFLDRLVSSLEEK-KHHEVKLREGLGDLSVKRMELQNALS 213
A + L K +L+ + S + + V LE + + + + G ++++R L
Sbjct: 103 AETAL-QAKNSELMQLTASHAAMKQRVVELERRLESRAMNIVTAEGHITLERQRLAELKK 161
Query: 212 SSWPKQEAAITKTRELKKLCESTLS 138
+ + A+T E KLC+ LS
Sbjct: 162 KANDMVDEAVTAKEEAAKLCKRYLS 186
>gb|AAN81563.1| ClpB protein [Escherichia coli CFT073]
gb|AAG57705.1| heat shock protein [Escherichia coli O157:H7 EDL933]
ref|NP_754995.1| ClpB protein [Escherichia coli CFT073]
ref|NP_289147.1| heat shock protein [Escherichia coli O157:H7 EDL933]
pir||E85905 heat shock protein [imported] - Escherichia coli (strain O157:H7,
substrain EDL933)
Length = 861
Score = 32.7 bits (73), Expect = 9.9
Identities = 40/202 (19%), Positives = 76/202 (37%), Gaps = 32/202 (15%)
Frame = -2
Query: 572 EYRNNILDDLLEVKSFLTQRLGEMRNADTSS----------LQHQVQAVSP--------- 450
EYR I D + F + E DT + L H VQ P
Sbjct: 322 EYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLS 381
Query: 449 --FVLQQHAPDSLENMLVEISSAISLLTNQKTLDLIMILNSKRFLDRLVSSLEEKKHHEV 276
++ + PD +++ E +S+I + + K +L DRL + + K +
Sbjct: 382 HRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEEL----------DRLDRRIIQLKLEQQ 431
Query: 275 KLREGLGDLSVKRMELQN-----------ALSSSWPKQEAAITKTRELKKLCESTLSSVF 129
L + + S KR+++ N L W ++A+++ T+ +K E ++
Sbjct: 432 ALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIE 491
Query: 128 DGRPVYIIGEINTLLSSSVSQL 63
R V + ++ L + +L
Sbjct: 492 QARRVGDLARMSELQYGKIPEL 513
>ref|NP_861984.1| rb109 [Ruegeria sp. PR1b]
gb|AAN05130.1| RB109 [Ruegeria sp. PR1b]
Length = 503
Score = 32.7 bits (73), Expect = 9.9
Identities = 32/164 (19%), Positives = 67/164 (40%)
Frame = -2
Query: 617 QSQMIAEDRSLLLEKEYRNNILDDLLEVKSFLTQRLGEMRNADTSSLQHQVQAVSPFVLQ 438
++Q+ D L E+E+ D+LL+ T +L + A+ + ++ ++A +
Sbjct: 315 EAQLGQADAERLAEREHAARKYDELLQKMQAETAQLQAVMQAEKAQMEAAIEAEK---TR 371
Query: 437 QHAPDSLENMLVEISSAISLLTNQKTLDLIMILNSKRFLDRLVSSLEEKKHHEVKLREGL 258
A E +E + Q L L+ + K + L ++L ++ H +E L
Sbjct: 372 MEAAIEAEKTRMEAAIEAEKTKAQTRLRLMQVEQQKAYEVDLSTALSGQRRHAEMRQEEL 431
Query: 257 GDLSVKRMELQNALSSSWPKQEAAITKTRELKKLCESTLSSVFD 126
R E Q A+++ Q + + E+++L + D
Sbjct: 432 ------RAEWQRAVAARDQAQALVVHRDEEIERLRRDLERQIID 469
>ref|XP_542946.2| PREDICTED: hypothetical protein XP_542946 [Canis familiaris]
Length = 356
Score = 32.7 bits (73), Expect = 9.9
Identities = 35/161 (21%), Positives = 73/161 (45%), Gaps = 11/161 (6%)
Frame = -2
Query: 593 RSLLLEKEYRNNILDDLLEVKSFLTQRLG----EMRNADTSSLQHQVQAVSPFVLQQHAP 426
R++L +++ ++D L + Q+L E + S ++H Q V Q +A
Sbjct: 138 RAMLQQQDSLATVIDILEYLNKKKLQKLRCELKEWEEKEESKMKHLAQQVE----QLNA- 192
Query: 425 DSLENMLVEISSAISLLTNQKTLDLIMILNSKRFLDRLVSSLEEKKHHEVKLREGL---- 258
+EN E++ + + ++ + + I N R L ++ S +++ ++R +
Sbjct: 193 -KIENTYKEVNFLSTYMDHEYPIKSVQIANLTRQLQQIKDSQQDELDELNEMRRMVLEYL 251
Query: 257 -GDLSVKRMELQNAL--SSSWPKQEAAITKTRELKKLCEST 144
+ K+ +L AL S P QEA + KTR+ + + + T
Sbjct: 252 SNQIQKKKKKLLKALVVKSQQPHQEALLKKTRDSQYMLKCT 292
>dbj|BAA14336.1| hemagglutinin precursor [Influenza A virus
(A/duck/England/56(H11N6))]
sp|P04661|HEMA_IADE1 Hemagglutinin precursor [Contains: Hemagglutinin HA1 chain;
Hemagglutinin HA2 chain]
pir||HMIVDE hemagglutinin precursor - influenza A virus (strain A/duck/
England/56 [H11N6])
Length = 565
Score = 32.7 bits (73), Expect = 9.9
Identities = 21/85 (24%), Positives = 40/85 (47%), Gaps = 2/85 (2%)
Frame = -2
Query: 599 EDRSLLLEKEYRNNILDDLLEVKSFLTQRLGEMRNADTSSLQHQVQAVSPFV--LQQHAP 426
E + +KE +D + + + R+ N + S+QH+ + + L +H
Sbjct: 372 EGTGIAADKESTQKAIDQITSKVNNIVDRM----NTNFESVQHEFSEIEERINQLSKHVD 427
Query: 425 DSLENMLVEISSAISLLTNQKTLDL 351
DS+ ++ + + LL N+KTLDL
Sbjct: 428 DSVVDIWSYNAQLLVLLENEKTLDL 452
>ref|XP_887622.1| PREDICTED: similar to Pre-B-cell leukemia transcription factor 2
(Homeobox protein PBX2) (G17 protein) isoform 3 [Bos
taurus]
Length = 240
Score = 32.7 bits (73), Expect = 9.9
Identities = 32/103 (31%), Positives = 49/103 (47%), Gaps = 3/103 (2%)
Frame = -2
Query: 431 APDSLENMLVEIS---SAISLLTNQKTLDLIMILNSKRFLDRLVSSLEEKKHHEVKLREG 261
AP +E M+ I SAI + Q T + +MIL S RFLD + ++++ + E
Sbjct: 14 APKEMERMVSIIHRKFSAIQMQLKQSTCEAVMILRS-RFLD----ARRKRRNFSKQATEV 68
Query: 260 LGDLSVKRMELQNALSSSWPKQEAAITKTRELKKLCESTLSSV 132
L + + LS+ +P +EA EL K C T+S V
Sbjct: 69 LNEY------FYSHLSNPYPSEEA----KEELAKKCGITVSQV 101
>gb|AAY85533.1| hemagglutinin [Influenza A virus (A/duck/Yangzhou/906/2002(H11N2))]
Length = 565
Score = 32.7 bits (73), Expect = 9.9
Identities = 21/85 (24%), Positives = 40/85 (47%), Gaps = 2/85 (2%)
Frame = -2
Query: 599 EDRSLLLEKEYRNNILDDLLEVKSFLTQRLGEMRNADTSSLQHQVQAVSPFV--LQQHAP 426
E + +KE +D + + + R+ N + S+QH+ + + L +H
Sbjct: 372 EGTGIAADKESTQKAIDQITSKVNNIVDRM----NTNFESVQHEFSEIEERINRLSKHVD 427
Query: 425 DSLENMLVEISSAISLLTNQKTLDL 351
DS+ ++ + + LL N+KTLDL
Sbjct: 428 DSVVDIWSYNAQLLVLLENEKTLDL 452
>gb|ABB88066.1| hemagglutinin [Influenza A virus (A/mallard/ALB/124/1991(H11N2))]
Length = 565
Score = 32.7 bits (73), Expect = 9.9
Identities = 21/85 (24%), Positives = 41/85 (48%), Gaps = 2/85 (2%)
Frame = -2
Query: 599 EDRSLLLEKEYRNNILDDLLEVKSFLTQRLGEMRNADTSSLQHQVQAVSPFV--LQQHAP 426
E + +KE +D + + + R+ N + +S+QH+ + + L +H
Sbjct: 372 EGTGIAADKESTQKAIDQITSKVNNIVDRM----NTNFASVQHEFSEIEERINQLSKHVD 427
Query: 425 DSLENMLVEISSAISLLTNQKTLDL 351
DS+ ++ + + LL N+KTLDL
Sbjct: 428 DSVIDIWSYNAQLLVLLENEKTLDL 452
>dbj|BAC32588.1| unnamed protein product [Mus musculus]
dbj|BAC34013.1| unnamed protein product [Mus musculus]
Length = 677
Score = 32.7 bits (73), Expect = 9.9
Identities = 29/123 (23%), Positives = 62/123 (50%)
Frame = -2
Query: 581 LEKEYRNNILDDLLEVKSFLTQRLGEMRNADTSSLQHQVQAVSPFVLQQHAPDSLENMLV 402
L+ +YR D++ +K QRL +R A +++ + + V ++H ++L+NM
Sbjct: 121 LQGDYR-----DVVNMKESSKQRLEALREA---AIKEETEYVELLAAEKHQVEALKNMQH 172
Query: 401 EISSAISLLTNQKTLDLIMILNSKRFLDRLVSSLEEKKHHEVKLREGLGDLSVKRMELQN 222
+ + ++S+L ++ + ++ DRL +EE + K +G+ +V R+E +
Sbjct: 173 Q-NKSLSMLDE-------ILEDVRKAADRLEEEIEEHAFDDNKSVKGVNFEAVLRVEEEE 224
Query: 221 ALS 213
A S
Sbjct: 225 ASS 227
>gb|AAH39955.1| Transmembrane and coiled-coil domains 3 [Mus musculus]
dbj|BAC40623.1| unnamed protein product [Mus musculus]
dbj|BAC28322.1| unnamed protein product [Mus musculus]
ref|NP_758486.1| transmembrane and coiled-coil domains 3 [Mus musculus]
Length = 678
Score = 32.7 bits (73), Expect = 9.9
Identities = 29/123 (23%), Positives = 62/123 (50%)
Frame = -2
Query: 581 LEKEYRNNILDDLLEVKSFLTQRLGEMRNADTSSLQHQVQAVSPFVLQQHAPDSLENMLV 402
L+ +YR D++ +K QRL +R A +++ + + V ++H ++L+NM
Sbjct: 121 LQGDYR-----DVVNMKESSKQRLEALREA---AIKEETEYVELLAAEKHQVEALKNMQH 172
Query: 401 EISSAISLLTNQKTLDLIMILNSKRFLDRLVSSLEEKKHHEVKLREGLGDLSVKRMELQN 222
+ + ++S+L ++ + ++ DRL +EE + K +G+ +V R+E +
Sbjct: 173 Q-NKSLSMLDE-------ILEDVRKAADRLEEEIEEHAFDDNKSVKGVNFEAVLRVEEEE 224
Query: 221 ALS 213
A S
Sbjct: 225 ASS 227
>dbj|BAE28438.1| unnamed protein product [Mus musculus]
Length = 678
Score = 32.7 bits (73), Expect = 9.9
Identities = 29/123 (23%), Positives = 62/123 (50%)
Frame = -2
Query: 581 LEKEYRNNILDDLLEVKSFLTQRLGEMRNADTSSLQHQVQAVSPFVLQQHAPDSLENMLV 402
L+ +YR D++ +K QRL +R A +++ + + V ++H ++L+NM
Sbjct: 121 LQGDYR-----DVVNMKESSKQRLEALREA---AIKEETEYVELLAAEKHQVEALKNMQH 172
Query: 401 EISSAISLLTNQKTLDLIMILNSKRFLDRLVSSLEEKKHHEVKLREGLGDLSVKRMELQN 222
+ + ++S+L ++ + ++ DRL +EE + K +G+ +V R+E +
Sbjct: 173 Q-NKSLSMLDE-------ILEDVRKAADRLEEEIEEHAFDDNKSVKGVNFEAVLRVEEEE 224
Query: 221 ALS 213
A S
Sbjct: 225 ASS 227
>ref|XP_225016.3| PREDICTED: similar to RIKEN cDNA B230339H12 [Rattus norvegicus]
Length = 678
Score = 32.7 bits (73), Expect = 9.9
Identities = 29/123 (23%), Positives = 62/123 (50%)
Frame = -2
Query: 581 LEKEYRNNILDDLLEVKSFLTQRLGEMRNADTSSLQHQVQAVSPFVLQQHAPDSLENMLV 402
L+ +YR D++ +K QRL +R A +++ + + V ++H ++L+NM
Sbjct: 122 LQGDYR-----DVVNMKESSKQRLEALREA---AIKEETEYVELLAAEKHQVEALKNMQH 173
Query: 401 EISSAISLLTNQKTLDLIMILNSKRFLDRLVSSLEEKKHHEVKLREGLGDLSVKRMELQN 222
+ + ++S+L ++ + ++ DRL +EE + K +G+ +V R+E +
Sbjct: 174 Q-NKSLSMLDE-------ILEDVRKAADRLEEEIEEHAFDDNKSVKGVNFEAVLRVEEEE 225
Query: 221 ALS 213
A S
Sbjct: 226 ASS 228
>gb|EAR84887.1| Leucine Rich Repeat family protein [Tetrahymena thermophila SB210]
Length = 905
Score = 32.7 bits (73), Expect = 9.9
Identities = 34/154 (22%), Positives = 68/154 (44%), Gaps = 4/154 (2%)
Frame = -2
Query: 584 LLEKEYRNNILDDLLEVKSFLTQRLGEMRNADTSSLQHQVQAVSPFVLQQHAPDSLENML 405
L+E+E++ L++ + L++ E + S AV Q + + L+N L
Sbjct: 552 LMEQEFKKYFLENNNRFRE-LSRAYEEKCKQEQDSRHLMKVAVQKNSDQANLIEELQNAL 610
Query: 404 VEISSAISLLTNQKTLDLIMILNSKRFLDRLVSSLEEKK----HHEVKLREGLGDLSVKR 237
+++ +S + N++ + + K R VSSLEE++ H ++ L L D+ +
Sbjct: 611 LKVKKEVSEIVNERDVAQKELDTKKSTYMREVSSLEEERDRLLHDKLSLERQLQDIQDRN 670
Query: 236 MELQNALSSSWPKQEAAITKTRELKKLCESTLSS 135
M L K + +L+K C+ T+ +
Sbjct: 671 MTDNLELERLRAKMKYFENIEEDLEK-CQETVQA 703
Database: nr
Posted date: Apr 6, 2006 2:41 PM
Number of letters in database: 1,185,965,366
Number of sequences in database: 3,454,138
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,087,611,949
Number of Sequences: 3454138
Number of extensions: 18127290
Number of successful extensions: 56339
Number of sequences better than 10.0: 139
Number of HSP's better than 10.0 without gapping: 54441
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 56207
length of database: 1,185,965,366
effective HSP length: 124
effective length of database: 757,652,254
effective search space used: 63642789336
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)