BLASTX 2.2.6 [Apr-09-2003]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 131537.2.536
(819 letters)
Database: nr
3,454,138 sequences; 1,185,965,366 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_468444.1| putative 60S ribosomal protein L28 [Oryza ... 256 5e-67
gb|AAV67824.1| putative 60S ribosomal L28 protein [Oryza sa... 254 4e-66
ref|NP_916542.1| ribosomal protein L28-like [Oryza sativa (... 252 1e-65
gb|ABA46763.1| unknown [Solanum tuberosum] 214 3e-54
ref|NP_179563.1| structural constituent of ribosome [Arabid... 202 9e-51
ref|NP_194670.1| structural constituent of ribosome [Arabid... 200 6e-50
gb|AAV67825.1| putative 60S ribosomal L28 protein [Oryza sa... 187 5e-46
gb|ABA46762.1| unknown [Solanum tuberosum] 94 8e-18
gb|AAX48862.1| L28 [Suberites domuncula] 91 7e-17
ref|XP_962926.1| hypothetical protein [Neurospora crassa N1... 90 9e-17
ref|XP_747557.1| ribosomal L28e protein family [Aspergillus... 90 9e-17
dbj|BAE61777.1| unnamed protein product [Aspergillus oryzae] 90 1e-16
ref|XP_382679.1| hypothetical protein FG02503.1 [Gibberella... 90 1e-16
gb|AAM27485.1| GH04183p [Drosophila melanogaster] 87 6e-16
gb|AAX62393.1| ribosomal protein L28 [Lysiphlebus testaceipes] 84 5e-15
gb|EAQ89008.1| hypothetical protein CHGG_05627 [Chaetomium ... 84 6e-15
ref|XP_533581.2| PREDICTED: similar to ribosomal protein L2... 84 6e-15
ref|NP_728840.1| Ribosomal protein L28 CG12740-PD, isoform ... 84 8e-15
emb|CAA22600.1| rpl28 [Schizosaccharomyces pombe] >gi|19114... 83 1e-14
gb|AAK92164.1| ribosomal protein L28 [Spodoptera frugiperda... 83 1e-14
emb|CAJ17401.1| ribosomal protein L28e [Carabus granulatus] 83 1e-14
ref|XP_625152.1| PREDICTED: similar to ribosomal protein L2... 82 2e-14
emb|CAJ17402.1| ribosomal protein L28e [Eucinetus sp. APV-2... 82 2e-14
dbj|BAD26660.1| Ribosomal protein L28 [Plutella xylostella] 82 2e-14
gb|AAR09798.1| similar to Drosophila melanogaster CG12740 [... 81 5e-14
ref|XP_761155.1| hypothetical protein UM05008.1 [Ustilago m... 81 5e-14
emb|CAJ17403.1| ribosomal protein L28e [Meladema coriacea] 81 5e-14
gb|AAV34840.1| ribosomal protein L28 [Bombyx mori] 80 7e-14
ref|NP_000982.2| ribosomal protein L28 [Homo sapiens] >gi|1... 80 7e-14
gb|EAA10888.3| ENSANGP00000014265 [Anopheles gambiae str. P... 80 7e-14
gb|AAX43853.1| ribosomal protein L28 [synthetic construct] 80 7e-14
gb|AAH86932.1| Ribosomal protein L28 [Mus musculus] >gi|193... 80 9e-14
gb|AAI02345.1| Hypothetical protein LOC618702 [Bos taurus] ... 80 1e-13
gb|EAL30177.1| GA11782-PA [Drosophila pseudoobscura] 79 2e-13
gb|AAA85657.1| ribosomal protein L28 >gi|1096941|prf||21132... 79 2e-13
gb|AAH10182.1| Ribosomal protein L28 [Homo sapiens] 79 2e-13
ref|XP_789202.1| PREDICTED: similar to ribosomal protein L2... 79 3e-13
gb|AAH86797.1| Ribosomal protein L28 [Mus musculus] 79 3e-13
ref|XP_520919.1| PREDICTED: similar to ribosomal protein L2... 79 3e-13
gb|AAV91468.1| ribosomal protein 30 [Lonomia obliqua] 78 3e-13
emb|CAJ17404.1| ribosomal protein L28e [Sphaerius sp. APV-2... 77 6e-13
ref|NP_001016714.1| ribosomal protein L28 [Xenopus tropicalis] 77 6e-13
gb|AAH78544.1| Unknown (protein for MGC:85393) [Xenopus lae... 77 8e-13
gb|AAR11386.1| 60S ribosomal protein L28 [Hippocampus comes] 77 1e-12
emb|CAH57698.1| 60S ribosomal protein L28 [Platichthys flesus] 76 1e-12
ref|XP_640178.1| hypothetical protein DDB0214936 [Dictyoste... 76 2e-12
gb|AAT68160.1| 60S ribosomal protein L28 [Danio rerio] >gi|... 75 3e-12
gb|AAY43419.1| ribosomal protein L28 [Phytophthora infestans] 75 4e-12
gb|AAK95155.1| ribosomal protein L28 [Ictalurus punctatus] 75 4e-12
gb|AAX11340.1| ribosomal protein L28 [Haliotis asinina] 74 7e-12
gb|AAH53798.1| MGC64430 protein [Xenopus laevis] 74 7e-12
ref|XP_664973.1| 60S ribosomal protein L28 [Cryptosporidium... 73 1e-11
sp|P17702|RL28_RAT 60S ribosomal protein L28 >gi|57113|emb|... 73 1e-11
emb|CAH65438.1| hypothetical protein [Gallus gallus] 73 1e-11
ref|XP_625720.1| 60S ribosomal protein L28 [Cryptosporidium... 72 2e-11
ref|NP_728841.1| Ribosomal protein L28 CG12740-PC, isoform ... 72 3e-11
pir||T43380 ribosomal protein L28 - fission yeast (Schizosa... 69 2e-10
ref|XP_212890.1| PREDICTED: similar to ribosomal protein L2... 69 2e-10
ref|XP_214103.1| PREDICTED: similar to ribosomal protein L2... 68 5e-10
gb|AAQ76786.1| 60S ribosomal protein L28 [Herdmania curvata] 67 1e-09
gb|AAW41987.1| 60s ribosomal protein, putative [Cryptococcu... 64 5e-09
ref|XP_620126.2| PREDICTED: similar to ribosomal protein L2... 62 3e-08
ref|NP_506180.1| Ribosomal Protein, Large subunit family me... 62 3e-08
ref|XP_512911.1| PREDICTED: similar to ribosomal protein L2... 60 1e-07
ref|XP_664104.1| hypothetical protein AN6500.2 [Aspergillus... 59 2e-07
gb|AAY66859.1| ribosomal protein L28 [Ixodes scapularis] 59 2e-07
ref|XP_503934.1| hypothetical protein [Yarrowia lipolytica]... 56 1e-06
ref|XP_890841.1| PREDICTED: similar to ribosomal protein L2... 56 2e-06
emb|CAE63977.1| Hypothetical protein CBG08569 [Caenorhabdit... 55 4e-06
emb|CAF89608.1| unnamed protein product [Tetraodon nigrovir... 54 9e-06
dbj|BAD92864.1| ribosomal protein L28 variant [Homo sapiens] 52 2e-05
ref|XP_655185.1| MAK16 protein [Entamoeba histolytica HM-1:... 47 7e-04
ref|XP_828692.1| 60S ribosomal protein L28 [Trypanosoma bru... 47 0.001
ref|XP_763632.1| 60S ribosomal protein L28 [Theileria parva... 46 0.001
ref|XP_679451.1| hypothetical protein [Plasmodium berghei s... 43 0.016
emb|CAJ02970.1| 60S ribosomal protein L28, putative [Leishm... 41 0.047
ref|XP_821217.1| 60S ribosomal protein L28 [Trypanosoma cru... 41 0.061
ref|XP_820211.1| 60S ribosomal protein L28 [Trypanosoma cru... 40 0.080
ref|XP_792350.1| PREDICTED: similar to CG32030-PA, isoform ... 40 0.10
ref|XP_821218.1| 60S ribosomal protein L28 [Trypanosoma cru... 39 0.18
emb|CAI75800.1| 60S ribosomal protein l28, putative [Theile... 39 0.23
ref|XP_522512.1| PREDICTED: similar to KM-102-derived reduc... 39 0.23
sp|Q58058|PGK_METJA Phosphoglycerate kinase >gi|1592299|gb|... 38 0.40
ref|XP_960199.1| hypothetical protein [Neurospora crassa N1... 37 0.68
ref|NP_701295.1| hypothetical protein PF11_0437 [Plasmodium... 37 0.89
gb|EAS04028.1| hypothetical protein TTHERM_00994250 [Tetrah... 35 2.6
ref|ZP_00660990.1| Chorismate mutase [Prosthecochloris vibr... 35 2.6
gb|EAS07440.1| hypothetical protein TTHERM_00571760 [Tetrah... 35 4.4
ref|ZP_00629981.1| Amidohydrolase [Paracoccus denitrificans... 35 4.4
gb|AAW24596.1| SJCHGC09242 protein [Schistosoma japonicum] 34 5.8
ref|ZP_00695250.1| hypothetical protein RferDRAFT_4160 [Rho... 34 7.5
gb|EAR87944.1| hypothetical protein TTHERM_00011040 [Tetrah... 34 7.5
emb|CAE68183.1| Hypothetical protein CBG13843 [Caenorhabdit... 34 7.5
emb|CAE68185.1| Hypothetical protein CBG13845 [Caenorhabdit... 34 7.5
ref|YP_052907.1| ribosomal protein S2 [Saprolegnia ferax] >... 34 7.5
ref|XP_576183.1| PREDICTED: transcription elongation factor... 34 7.5
ref|XP_665459.1| hypothetical protein Chro.30323 [Cryptospo... 33 9.8
ref|ZP_00593836.1| Cation efflux protein [Ralstonia metalli... 33 9.8
gb|EAR99887.1| cyclic nucleotide-binding domain containing ... 33 9.8
gb|EAR92179.1| Ser/Thr protein phosphatase family protein [... 33 9.8
>ref|XP_468444.1| putative 60S ribosomal protein L28 [Oryza sativa (japonica
cultivar-group)]
dbj|BAD22882.1| putative 60S ribosomal protein L28 [Oryza sativa (japonica
cultivar-group)]
dbj|BAD23114.1| putative 60S ribosomal protein L28 [Oryza sativa (japonica
cultivar-group)]
Length = 147
Score = 256 bits (655), Expect = 5e-67
Identities = 128/144 (88%), Positives = 133/144 (92%)
Frame = -2
Query: 731 MATVPGDLIWQIVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNVHSYKYSGLANKKTVTIQ 552
MATVP L W+IV+KNN FLVKQFGN NAKVQFTKEPNNLYNVHSYK+SGLANKKTVTIQ
Sbjct: 1 MATVPEPLFWEIVKKNNCFLVKQFGNSNAKVQFTKEPNNLYNVHSYKHSGLANKKTVTIQ 60
Query: 551 PAAGKDSAVVLSTTKTKKQNTPAKLSHKSVMRKEFRKMAKAVKNQVGDNYYRPDLTKSAL 372
P+ GKD+AVVLSTTKTKKQN PAKL HKSVMRKEFRKMAKAVKNQV DNYYRPDLTK AL
Sbjct: 61 PSGGKDAAVVLSTTKTKKQNAPAKLYHKSVMRKEFRKMAKAVKNQVSDNYYRPDLTKPAL 120
Query: 371 GRLSSVYRSLQVAKSGVKKKNRQP 300
RLSSVYRSLQVAKSGVKKKNRQP
Sbjct: 121 ARLSSVYRSLQVAKSGVKKKNRQP 144
>gb|AAV67824.1| putative 60S ribosomal L28 protein [Oryza sativa (japonica
cultivar-group)]
ref|XP_475816.1| putative 60S ribosomal L28 protein [Oryza sativa (japonica
cultivar-group)]
Length = 147
Score = 254 bits (648), Expect = 4e-66
Identities = 127/145 (87%), Positives = 133/145 (91%)
Frame = -2
Query: 731 MATVPGDLIWQIVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNVHSYKYSGLANKKTVTIQ 552
MATVP LIW+IV+KNN FLVKQFGN NAKVQFTKEPNNLYNVHSYK+SGLANKKTVTIQ
Sbjct: 1 MATVPEPLIWEIVKKNNCFLVKQFGNSNAKVQFTKEPNNLYNVHSYKHSGLANKKTVTIQ 60
Query: 551 PAAGKDSAVVLSTTKTKKQNTPAKLSHKSVMRKEFRKMAKAVKNQVGDNYYRPDLTKSAL 372
P+ KD+AVVLSTTKTKKQN PAKL HKSVMRKEFRKMAKAVKNQV DNYYRPDLTK AL
Sbjct: 61 PSGVKDAAVVLSTTKTKKQNAPAKLYHKSVMRKEFRKMAKAVKNQVSDNYYRPDLTKPAL 120
Query: 371 GRLSSVYRSLQVAKSGVKKKNRQPT 297
RLSSVYRSLQV+KSG KKKNRQPT
Sbjct: 121 ARLSSVYRSLQVSKSGAKKKNRQPT 145
>ref|NP_916542.1| ribosomal protein L28-like [Oryza sativa (japonica cultivar-group)]
Length = 145
Score = 252 bits (643), Expect = 1e-65
Identities = 122/143 (85%), Positives = 135/143 (94%)
Frame = -2
Query: 731 MATVPGDLIWQIVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNVHSYKYSGLANKKTVTIQ 552
MAT+P L+W++V+KNNSFLVKQFGNGNAKVQF+KEPNNLYNVHSYK+SGLANKKTVT+Q
Sbjct: 1 MATIPDSLVWELVKKNNSFLVKQFGNGNAKVQFSKEPNNLYNVHSYKHSGLANKKTVTVQ 60
Query: 551 PAAGKDSAVVLSTTKTKKQNTPAKLSHKSVMRKEFRKMAKAVKNQVGDNYYRPDLTKSAL 372
PA+GK++AVVLSTTKT+KQN PA L HKSVMRKEFRKMAKAVKNQV DNYYRPDLTK AL
Sbjct: 61 PASGKETAVVLSTTKTEKQNKPASLYHKSVMRKEFRKMAKAVKNQVSDNYYRPDLTKPAL 120
Query: 371 GRLSSVYRSLQVAKSGVKKKNRQ 303
RLS+VYRSLQVAKSGVKKKNRQ
Sbjct: 121 ARLSAVYRSLQVAKSGVKKKNRQ 143
>gb|ABA46763.1| unknown [Solanum tuberosum]
Length = 143
Score = 214 bits (545), Expect = 3e-54
Identities = 106/143 (74%), Positives = 125/143 (87%)
Frame = -2
Query: 731 MATVPGDLIWQIVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNVHSYKYSGLANKKTVTIQ 552
M TVPG L+W+IV+KNNSFLVK+FGNG+A V F+KEPNNL N+HSYK+SGLANKKTVTIQ
Sbjct: 1 MTTVPGQLVWEIVKKNNSFLVKEFGNGSAGVVFSKEPNNLCNLHSYKHSGLANKKTVTIQ 60
Query: 551 PAAGKDSAVVLSTTKTKKQNTPAKLSHKSVMRKEFRKMAKAVKNQVGDNYYRPDLTKSAL 372
P GKD +V+L+T+KTKKQN P+ L +KSVM+KEFR+MAKAV NQVGDNYYRPDL K+AL
Sbjct: 61 PE-GKDKSVLLATSKTKKQNMPSSLLNKSVMKKEFRRMAKAVTNQVGDNYYRPDLKKAAL 119
Query: 371 GRLSSVYRSLQVAKSGVKKKNRQ 303
RLS V RSL+V KSG KK+NRQ
Sbjct: 120 ARLSVVNRSLKVTKSGAKKRNRQ 142
>ref|NP_179563.1| structural constituent of ribosome [Arabidopsis thaliana]
ref|NP_001031374.1| structural constituent of ribosome [Arabidopsis thaliana]
gb|AAL85109.1| putative ribosomal protein L28 [Arabidopsis thaliana]
gb|AAK92704.1| putative ribosomal protein L28 [Arabidopsis thaliana]
gb|AAC62149.1| putative ribosomal protein L28 [Arabidopsis thaliana]
Length = 143
Score = 202 bits (515), Expect = 9e-51
Identities = 102/143 (71%), Positives = 121/143 (84%)
Frame = -2
Query: 731 MATVPGDLIWQIVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNVHSYKYSGLANKKTVTIQ 552
MATVPG LIW+IV+ NN FLVKQFG GN+KVQF+KE NNL NVHSYK+SGLANKKTVTIQ
Sbjct: 1 MATVPGQLIWEIVKNNNCFLVKQFGRGNSKVQFSKETNNLTNVHSYKHSGLANKKTVTIQ 60
Query: 551 PAAGKDSAVVLSTTKTKKQNTPAKLSHKSVMRKEFRKMAKAVKNQVGDNYYRPDLTKSAL 372
AA KD AVVL+TTKTKKQN P +KS+++KEF +M+KAV NQV DNYYRPDL K+AL
Sbjct: 61 -AADKDQAVVLATTKTKKQNKPKLSVNKSILKKEFPRMSKAVANQVVDNYYRPDLKKAAL 119
Query: 371 GRLSSVYRSLQVAKSGVKKKNRQ 303
RLS++ + L+VAKSG K++NRQ
Sbjct: 120 ARLSAISKGLRVAKSGAKQRNRQ 142
>ref|NP_194670.1| structural constituent of ribosome [Arabidopsis thaliana]
emb|CAB79699.1| putative protein [Arabidopsis thaliana]
gb|AAN15366.1| putative protein [Arabidopsis thaliana]
gb|AAL61935.1| putative protein [Arabidopsis thaliana]
gb|AAM65843.1| putative ribosomal protein L28 [Arabidopsis thaliana]
Length = 143
Score = 200 bits (508), Expect = 6e-50
Identities = 99/143 (69%), Positives = 120/143 (83%)
Frame = -2
Query: 731 MATVPGDLIWQIVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNVHSYKYSGLANKKTVTIQ 552
MATVPG LIW+IV++NN FLVKQFG GNAKVQF+KE NNL N++SYK+SGLANKKTVTIQ
Sbjct: 1 MATVPGQLIWEIVKRNNCFLVKQFGRGNAKVQFSKESNNLVNINSYKHSGLANKKTVTIQ 60
Query: 551 PAAGKDSAVVLSTTKTKKQNTPAKLSHKSVMRKEFRKMAKAVKNQVGDNYYRPDLTKSAL 372
AAGKD VVL TTKTK+QN P +KS+++KEF +M+K V NQV DNYYRPDL K+AL
Sbjct: 61 -AAGKDQGVVLGTTKTKRQNKPKLSVNKSILKKEFSRMSKVVANQVVDNYYRPDLKKAAL 119
Query: 371 GRLSSVYRSLQVAKSGVKKKNRQ 303
RLS++ + L+VAKSG K++NRQ
Sbjct: 120 ARLSAISKGLRVAKSGPKRRNRQ 142
>gb|AAV67825.1| putative 60S ribosomal L28 protein [Oryza sativa (japonica
cultivar-group)]
Length = 133
Score = 187 bits (474), Expect = 5e-46
Identities = 93/106 (87%), Positives = 98/106 (92%)
Frame = -2
Query: 731 MATVPGDLIWQIVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNVHSYKYSGLANKKTVTIQ 552
MATVP LIW+IV+KNN FLVKQFGN NAKVQFTKEPNNLYNVHSYK+SGLANKKTVTIQ
Sbjct: 1 MATVPEPLIWEIVKKNNCFLVKQFGNSNAKVQFTKEPNNLYNVHSYKHSGLANKKTVTIQ 60
Query: 551 PAAGKDSAVVLSTTKTKKQNTPAKLSHKSVMRKEFRKMAKAVKNQV 414
P+ KD+AVVLSTTKTKKQN PAKL HKSVMRKEFRKMAKAVKNQV
Sbjct: 61 PSGVKDAAVVLSTTKTKKQNAPAKLYHKSVMRKEFRKMAKAVKNQV 106
>gb|ABA46762.1| unknown [Solanum tuberosum]
Length = 64
Score = 93.6 bits (231), Expect = 8e-18
Identities = 46/62 (74%), Positives = 53/62 (85%)
Frame = -2
Query: 488 PAKLSHKSVMRKEFRKMAKAVKNQVGDNYYRPDLTKSALGRLSSVYRSLQVAKSGVKKKN 309
P+ L +KSVM+KEFR+MAKAV NQVGDNYYRPDL K+AL RLS V RSL+V KSG KK+N
Sbjct: 2 PSSLLNKSVMKKEFRRMAKAVTNQVGDNYYRPDLKKAALARLSVVNRSLKVTKSGAKKRN 61
Query: 308 RQ 303
RQ
Sbjct: 62 RQ 63
>gb|AAX48862.1| L28 [Suberites domuncula]
Length = 136
Score = 90.5 bits (223), Expect = 7e-17
Identities = 47/134 (35%), Positives = 83/134 (61%)
Frame = -2
Query: 713 DLIWQIVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNVHSYKYSGLANKKTVTIQPAAGKD 534
+L W++++ ++SFL+++ G + V FT EPNN+ N +S+K++GL NKK V + AA +
Sbjct: 4 ELQWELIKNSSSFLLRRKGPRGSGVTFTTEPNNVMNKNSFKFNGLVNKKVVGVSSAA-DN 62
Query: 533 SAVVLSTTKTKKQNTPAKLSHKSVMRKEFRKMAKAVKNQVGDNYYRPDLTKSALGRLSSV 354
V+ T ++K + PAK+ ++ + K+ R+ K++K + YRPDL + A+ R S++
Sbjct: 63 KGVLFKTKRSKVVSKPAKMFVRATLSKDRRRAFKSIKKNLECTEYRPDLAELAVRRASAI 122
Query: 353 YRSLQVAKSGVKKK 312
S + AK KK
Sbjct: 123 LSSQRPAKRLKGKK 136
>ref|XP_962926.1| hypothetical protein [Neurospora crassa N150]
ref|XP_326065.1| predicted protein [Neurospora crassa]
gb|EAA33690.1| predicted protein [Neurospora crassa]
Length = 150
Score = 90.1 bits (222), Expect = 9e-17
Identities = 58/143 (40%), Positives = 80/143 (55%), Gaps = 1/143 (0%)
Frame = -2
Query: 731 MATVPGDLIWQIVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNVHSYKYSGLANKKTVTIQ 552
++ V DLIW+I R +NSFLVK+ G VQF+++P NL N HS KY+G N K V +
Sbjct: 3 LSNVSADLIWEITRSHNSFLVKRKSGGG--VQFSRDPLNLTNKHSRKYAGFVNDKAVGVV 60
Query: 551 PAAGKDSAVVLSTTKTKKQNTP-AKLSHKSVMRKEFRKMAKAVKNQVGDNYYRPDLTKSA 375
P G+ VV++T K N P A+ + K RK KA+ QV YR DL K+A
Sbjct: 61 P--GEKGGVVVTTKKAGSINKPAARYTVAFGANKTARKTYKAIARQVAG--YRSDLLKAA 116
Query: 374 LGRLSSVYRSLQVAKSGVKKKNR 306
+ R S++ RS + K +K R
Sbjct: 117 VARASAIRRSQRAVKPEPAQKLR 139
>ref|XP_747557.1| ribosomal L28e protein family [Aspergillus fumigatus Af293]
gb|EAL85519.1| Ribosomal L28e protein family [Aspergillus fumigatus Af293]
Length = 157
Score = 90.1 bits (222), Expect = 9e-17
Identities = 57/145 (39%), Positives = 80/145 (55%), Gaps = 2/145 (1%)
Frame = -2
Query: 734 EMATVPGDLIWQIVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNVHSYKYSGLANKKTVTI 555
E V DL+WQI R N+FLVK+ G + QF+++P NL N S+KY+G AN K V +
Sbjct: 4 ERTNVSSDLVWQITRNQNAFLVKRRTGGGS--QFSRDPLNLQNKQSFKYAGYANTKAVGV 61
Query: 554 QPAAGKDSAVVLSTTKTKKQNTPAK--LSHKSVMRKEFRKMAKAVKNQVGDNYYRPDLTK 381
Q A ++ VV+ T K PAK +S RK+ KAV ++ N YR DL +
Sbjct: 62 Q--ATENGGVVVITKKPGNPQQPAKNLVSVSWGPNAATRKIYKAVASKTAKNGYRADLRE 119
Query: 380 SALGRLSSVYRSLQVAKSGVKKKNR 306
A+ R+S++ RS + K KK R
Sbjct: 120 DAVARVSAIRRSQKPKKDAAPKKLR 144
>dbj|BAE61777.1| unnamed protein product [Aspergillus oryzae]
Length = 157
Score = 89.7 bits (221), Expect = 1e-16
Identities = 51/141 (36%), Positives = 80/141 (56%), Gaps = 2/141 (1%)
Frame = -2
Query: 722 VPGDLIWQIVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNVHSYKYSGLANKKTVTIQPAA 543
V DL+WQ+ R N+FLVK+ G + QF+++P NL N HS+KY+G AN K + +QP
Sbjct: 8 VSSDLVWQLTRNQNAFLVKRNSGGGS--QFSRDPLNLQNKHSFKYAGYANTKAIGVQPT- 64
Query: 542 GKDSAVVLSTTKTKKQNTPAKLSHKSVM--RKEFRKMAKAVKNQVGDNYYRPDLTKSALG 369
++ VV+ T K+ P K + + + RK+ K V ++ N YR DL + A+
Sbjct: 65 -ENGGVVVLTKKSGNAQQPGKNAVRVTFGPKASTRKIYKGVADKTAKNGYRADLREDAVA 123
Query: 368 RLSSVYRSLQVAKSGVKKKNR 306
R+S++ RS + K +K R
Sbjct: 124 RVSAIRRSQKPKKDTPPQKPR 144
>ref|XP_382679.1| hypothetical protein FG02503.1 [Gibberella zeae PH-1]
gb|EAA67132.1| hypothetical protein FG02503.1 [Gibberella zeae PH-1]
Length = 159
Score = 89.7 bits (221), Expect = 1e-16
Identities = 57/145 (39%), Positives = 82/145 (56%), Gaps = 1/145 (0%)
Frame = -2
Query: 737 REMATVPGDLIWQIVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNVHSYKYSGLANKKTVT 558
+E++ + DLIW+IVR NN F K NG VQF+++P NL N S K++G N K V
Sbjct: 5 QELSNISSDLIWEIVRDNNCFSAKSKKNGG--VQFSRDPLNLTNKSSRKHAGFVNDKAVG 62
Query: 557 IQPAAGKDSAVVLSTTKTKKQNTPAKLSHKSVM-RKEFRKMAKAVKNQVGDNYYRPDLTK 381
I AAG+ AVV++T K + ++ S K RK +AV NQV N YR DL
Sbjct: 63 I--AAGEKGAVVVTTKKAQPNKPAQNITTTSYSGSKSNRKTYQAVANQVAKNSYRADLRS 120
Query: 380 SALGRLSSVYRSLQVAKSGVKKKNR 306
+A+ R S++ +S + K ++K R
Sbjct: 121 AAVERASAIKKSHKPVKPEPEQKLR 145
>gb|AAM27485.1| GH04183p [Drosophila melanogaster]
Length = 236
Score = 87.4 bits (215), Expect = 6e-16
Identities = 58/141 (41%), Positives = 82/141 (58%)
Frame = -2
Query: 737 REMATVPGDLIWQIVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNVHSYKYSGLANKKTVT 558
REMAT L W I+R NN+FL+K+ + K F+ EPNNL +V SY+YSG+ +KKT+
Sbjct: 91 REMAT-SSHLNWLIIRNNNAFLLKK---RDVKKPFSTEPNNLASVSSYRYSGIVHKKTLG 146
Query: 557 IQPAAGKDSAVVLSTTKTKKQNTPAKLSHKSVMRKEFRKMAKAVKNQVGDNYYRPDLTKS 378
+ PAA K + K K PAK + + + R+ K +KN + + YR DLT++
Sbjct: 147 VVPAADKKGFTAV-LKKGKYAQRPAKNTVRVDFKAGPRRSLKKLKNLLIGSKYRKDLTQA 205
Query: 377 ALGRLSSVYRSLQVAKSGVKK 315
AL R S+V RS + A KK
Sbjct: 206 ALRRASAVLRSQKPAPVKGKK 226
>gb|AAX62393.1| ribosomal protein L28 [Lysiphlebus testaceipes]
Length = 137
Score = 84.3 bits (207), Expect = 5e-15
Identities = 56/136 (41%), Positives = 73/136 (53%), Gaps = 3/136 (2%)
Frame = -2
Query: 710 LIWQIVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNVHSYKYSGLANKKTVTIQPAAGKDS 531
L W I+R NN+FL+K+ N F+ E NNL N+ SY+YSGL + KTV + K
Sbjct: 4 LNWMIIRNNNAFLLKK---RNINKPFSTEANNLTNLSSYRYSGLVHSKTVGVVDTPDKKG 60
Query: 530 AVVLSTTKTKKQNTPAKLSHKSVMRKEFRKMAKAVKNQVGDNYYRPDLTKSALGRLSSVY 351
V+ T K K PAK K M+ R+ +K + N YR DLTK+AL R S+V
Sbjct: 61 FTVV-TKKPKCGKKPAKALEKRTMKAGARRSLYKLKTFLSANKYRRDLTKAALRRASAVL 119
Query: 350 RS---LQVAKSGVKKK 312
RS L V K+ KK
Sbjct: 120 RSQKPLPVKKARAAKK 135
>gb|EAQ89008.1| hypothetical protein CHGG_05627 [Chaetomium globosum CBS 148.51]
Length = 149
Score = 84.0 bits (206), Expect = 6e-15
Identities = 54/144 (37%), Positives = 77/144 (53%), Gaps = 2/144 (1%)
Frame = -2
Query: 731 MATVPGDLIWQIVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNVHSYKYSGLANKKTVTIQ 552
M+ V DLIW+I R +NS+LVK QF+++P NL N+HS K++G AN K + I
Sbjct: 1 MSNVSADLIWEISRSSNSYLVK-----TRTGQFSRDPLNLTNLHSRKFAGFANDKALGI- 54
Query: 551 PAAGKDSAVVLSTTKTKKQNTPAKLSHKSVM--RKEFRKMAKAVKNQVGDNYYRPDLTKS 378
+A + V + + K N PA H K RK +AV NQ N YR DL +
Sbjct: 55 -SANEKGGVQVISKKAASANKPASGVHTVTYGGNKTSRKTYRAVANQAAKNGYRADLRAA 113
Query: 377 ALGRLSSVYRSLQVAKSGVKKKNR 306
A+ R S++ RS + K ++K R
Sbjct: 114 AVSRASAIRRSQRAVKPEPEQKLR 137
>ref|XP_533581.2| PREDICTED: similar to ribosomal protein L28 [Canis familiaris]
Length = 259
Score = 84.0 bits (206), Expect = 6e-15
Identities = 52/149 (34%), Positives = 84/149 (56%), Gaps = 1/149 (0%)
Frame = -2
Query: 740 RREMATVPGDLIWQIVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNVHSYKYSGLANKKTV 561
R+ A + L W +VR +SFL+K+ K ++ EPNNL +S++Y+GL ++KTV
Sbjct: 117 RKGAAAMSAHLQWMVVRNCSSFLIKR-----NKQTYSTEPNNLKARNSFRYNGLIHRKTV 171
Query: 560 TIQPAA-GKDSAVVLSTTKTKKQNTPAKLSHKSVMRKEFRKMAKAVKNQVGDNYYRPDLT 384
++PAA GK VVL + Q PA ++ + K R ++++ + N YRPDL
Sbjct: 172 GVEPAADGKGVVVVLK--RRSGQRKPATSYVRTTINKNARATLSSIRHMIRKNKYRPDLR 229
Query: 383 KSALGRLSSVYRSLQVAKSGVKKKNRQPT 297
+A+ R S++ RS + VK+K +PT
Sbjct: 230 MAAIRRASAILRSQKPVM--VKRKRARPT 256
>ref|NP_728840.1| Ribosomal protein L28 CG12740-PD, isoform D [Drosophila
melanogaster]
ref|NP_728839.1| Ribosomal protein L28 CG12740-PB, isoform B [Drosophila
melanogaster]
ref|NP_647791.2| Ribosomal protein L28 CG12740-PA, isoform A [Drosophila
melanogaster]
gb|AAL49066.1| RE52852p [Drosophila melanogaster]
gb|AAN11547.1| CG12740-PD, isoform D [Drosophila melanogaster]
gb|AAF47742.1| CG12740-PB, isoform B [Drosophila melanogaster]
gb|AAN11546.1| CG12740-PA, isoform A [Drosophila melanogaster]
sp|Q9VZS5|RL28_DROME 60S ribosomal protein L28
Length = 144
Score = 83.6 bits (205), Expect = 8e-15
Identities = 53/132 (40%), Positives = 77/132 (58%)
Frame = -2
Query: 710 LIWQIVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNVHSYKYSGLANKKTVTIQPAAGKDS 531
L W I+R NN+FL+K+ + K F+ EPNNL +V SY+YSG+ +KKT+ + PAA K
Sbjct: 7 LNWLIIRNNNAFLLKK---RDVKKPFSTEPNNLASVSSYRYSGIVHKKTLGVVPAADKKG 63
Query: 530 AVVLSTTKTKKQNTPAKLSHKSVMRKEFRKMAKAVKNQVGDNYYRPDLTKSALGRLSSVY 351
+ K K PAK + + + R+ K +KN + + YR DLT++AL R S+V
Sbjct: 64 FTAV-LKKGKYAQRPAKNTVRVDFKAGPRRSLKKLKNLLIGSKYRKDLTQAALRRASAVL 122
Query: 350 RSLQVAKSGVKK 315
RS + A KK
Sbjct: 123 RSQKPAPVKGKK 134
>emb|CAA22600.1| rpl28 [Schizosaccharomyces pombe]
ref|NP_593124.1| hypothetical protein SPAC1687.06c [Schizosaccharomyces pombe 972h-]
sp|O14069|YFF6_SCHPO Probable 60S ribosomal protein C1687.06c
pir||T37749 60s ribosomal protein l28 - fission yeast (Schizosaccharomyces
pombe)
Length = 134
Score = 83.2 bits (204), Expect = 1e-14
Identities = 50/136 (36%), Positives = 76/136 (55%), Gaps = 3/136 (2%)
Frame = -2
Query: 725 TVPGDLIWQIVRKNNSFLVK--QFGNGNAKVQFTKEPNNLYNVHSYKYSGLANKKTVTIQ 552
+V DLIWQ++R NN FLVK +FG +QF +EP N+ ++ ++SGL N K V +Q
Sbjct: 2 SVSNDLIWQVIRDNNRFLVKRPEFGG----IQFNREPVNVSGKNAQRFSGLCNDKAVGVQ 57
Query: 551 PAAGKDSAVVLSTTKTKKQNTPAKLSHKSVM-RKEFRKMAKAVKNQVGDNYYRPDLTKSA 375
A V+++ T K PAKL K V+ RK K++ ++G YR DL K +
Sbjct: 58 -ANSPRGVVLITKTNPKNAQKPAKLFRKDVIANASSRKTYKSIAGRIGRTGYRDDLVKVS 116
Query: 374 LGRLSSVYRSLQVAKS 327
+ R S++ S + K+
Sbjct: 117 VARASAILSSQRPKKT 132
>gb|AAK92164.1| ribosomal protein L28 [Spodoptera frugiperda]
sp|Q962T2|RL28_SPOFR 60S ribosomal protein L28
Length = 139
Score = 83.2 bits (204), Expect = 1e-14
Identities = 49/128 (38%), Positives = 73/128 (57%)
Frame = -2
Query: 710 LIWQIVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNVHSYKYSGLANKKTVTIQPAAGKDS 531
L W I+R NN+FLVK+ N K F+KEPNN+ N++SY+Y+GL KK V + +
Sbjct: 5 LNWMIIRNNNAFLVKK---RNIKKPFSKEPNNVTNLNSYRYNGLIQKKAVGVVENPDRKG 61
Query: 530 AVVLSTTKTKKQNTPAKLSHKSVMRKEFRKMAKAVKNQVGDNYYRPDLTKSALGRLSSVY 351
V+ K K N PAK + + + R+ VK + N+YR DL+K+ L R S++
Sbjct: 62 FTVV-YKKAKATNKPAKNAVRRQFKAGARRSLYKVKRLLKANHYRTDLSKATLRRASAIL 120
Query: 350 RSLQVAKS 327
RS + K+
Sbjct: 121 RSQRPIKA 128
>emb|CAJ17401.1| ribosomal protein L28e [Carabus granulatus]
Length = 137
Score = 82.8 bits (203), Expect = 1e-14
Identities = 53/136 (38%), Positives = 76/136 (55%), Gaps = 4/136 (2%)
Frame = -2
Query: 710 LIWQIVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNVHSYKYSGLANKKTV-TIQPAAGKD 534
L W I+R NN+FL+K+ N F+ EP+NL N++S++Y+GL +KKTV ++P K
Sbjct: 5 LSWMIIRNNNAFLLKK---RNISKPFSTEPSNLTNLNSFRYNGLIHKKTVGIVEPKDKKG 61
Query: 533 SAVVLSTTKTKKQNTPAKLSHKSVMRKEFRKMAKAVKNQVGDNYYRPDLTKSALGRLSSV 354
VV K KQN P + + M+ R+ ++ + N YR DLTK AL R S++
Sbjct: 62 FTVVYK--KANKQNKPRRATITRTMKSGPRRSLHKLRRLMDKNSYRKDLTKVALRRASAI 119
Query: 353 YRS---LQVAKSGVKK 315
RS L V K KK
Sbjct: 120 LRSQKPLPVKKQRTKK 135
>ref|XP_625152.1| PREDICTED: similar to ribosomal protein L28 [Apis mellifera]
Length = 138
Score = 82.4 bits (202), Expect = 2e-14
Identities = 53/136 (38%), Positives = 75/136 (55%), Gaps = 3/136 (2%)
Frame = -2
Query: 710 LIWQIVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNVHSYKYSGLANKKTVTIQPAAGKDS 531
L W I+R NN+FL+K+ N F+ E NNL N+ SY+YSGL ++K+V I + K
Sbjct: 5 LNWMIIRNNNAFLLKK---RNINKPFSTESNNLTNLSSYRYSGLIHRKSVGIVDTSDKKG 61
Query: 530 AVVLSTTKTKKQNTPAKLSHKSVMRKEFRKMAKAVKNQVGDNYYRPDLTKSALGRLSSVY 351
++ K K N PAK + + M+ R+ +K + N YR DLTK+AL R S+V
Sbjct: 62 FTIVYK-KAKAMNKPAKATVRCTMKAGARRSLYKLKRLLTKNKYRIDLTKAALRRASAVL 120
Query: 350 RS---LQVAKSGVKKK 312
RS L K+ KK
Sbjct: 121 RSQKPLPAKKTRTTKK 136
>emb|CAJ17402.1| ribosomal protein L28e [Eucinetus sp. APV-2005]
Length = 140
Score = 82.0 bits (201), Expect = 2e-14
Identities = 51/141 (36%), Positives = 79/141 (56%)
Frame = -2
Query: 722 VPGDLIWQIVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNVHSYKYSGLANKKTVTIQPAA 543
+P L+W I+R NN+FL+K+ N F+ E NNL N+ S++Y+GL +KK+V +
Sbjct: 1 MPSHLVWSIIRNNNAFLLKK---RNISKPFSTEANNLTNLASFRYNGLIHKKSVGVIDGP 57
Query: 542 GKDSAVVLSTTKTKKQNTPAKLSHKSVMRKEFRKMAKAVKNQVGDNYYRPDLTKSALGRL 363
+ V+ K K+QN P + + M+ R+ +K + N+YR DLTK AL R
Sbjct: 58 SRKGFTVVYK-KAKRQNKPKFNTVRRTMKTGPRRSLYKLKRLLQKNHYRTDLTKFALRRA 116
Query: 362 SSVYRSLQVAKSGVKKKNRQP 300
S+V RS + K+ KK +P
Sbjct: 117 SAVLRSQKPLKT---KKAAKP 134
>dbj|BAD26660.1| Ribosomal protein L28 [Plutella xylostella]
Length = 139
Score = 82.0 bits (201), Expect = 2e-14
Identities = 50/132 (37%), Positives = 77/132 (58%), Gaps = 4/132 (3%)
Frame = -2
Query: 710 LIWQIVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNVHSYKYSGLANKKTVTIQPAAGKDS 531
L W I+R NN+F+VK+ + K F+KEPNN+ N+ SY+Y+GL +KK V + +
Sbjct: 5 LNWMIIRNNNAFIVKK---RDIKKPFSKEPNNVTNLSSYRYNGLIHKKAVGVVENPDRKG 61
Query: 530 AVVLSTTKTKKQNTPAKLSHKSVMRKEFRKMAK----AVKNQVGDNYYRPDLTKSALGRL 363
V+ T K K N P K+++R+ F+ A+ VK + N+YR DLTK+ L R
Sbjct: 62 FTVV-TKKAKATNKPV----KNIVRRSFKTGARRSLFKVKRLLKANHYRTDLTKATLRRA 116
Query: 362 SSVYRSLQVAKS 327
S++ RS + K+
Sbjct: 117 SAILRSQRPIKA 128
>gb|AAR09798.1| similar to Drosophila melanogaster CG12740 [Drosophila yakuba]
Length = 144
Score = 80.9 bits (198), Expect = 5e-14
Identities = 52/132 (39%), Positives = 76/132 (57%)
Frame = -2
Query: 710 LIWQIVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNVHSYKYSGLANKKTVTIQPAAGKDS 531
L W I+R NN+FL+K+ + K F+ EPNNL +V SY+YSG+ +KKT+ + PAA K
Sbjct: 7 LNWLIIRNNNAFLLKK---RDVKKPFSTEPNNLASVSSYRYSGIVHKKTLGVVPAADKKG 63
Query: 530 AVVLSTTKTKKQNTPAKLSHKSVMRKEFRKMAKAVKNQVGDNYYRPDLTKSALGRLSSVY 351
+ K K PAK + + + R+ K +KN + + YR LT++AL R S+V
Sbjct: 64 FTAV-LKKGKYAQRPAKNTVRVDFKAGPRRSLKKLKNLLIGSKYRKGLTQAALRRASAVL 122
Query: 350 RSLQVAKSGVKK 315
RS + A KK
Sbjct: 123 RSQKPAPVKGKK 134
>ref|XP_761155.1| hypothetical protein UM05008.1 [Ustilago maydis 521]
gb|EAK85826.1| hypothetical protein UM05008.1 [Ustilago maydis 521]
Length = 221
Score = 80.9 bits (198), Expect = 5e-14
Identities = 52/114 (45%), Positives = 68/114 (59%), Gaps = 3/114 (2%)
Frame = -2
Query: 713 DLIWQIVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNVHSYKYSGLANKKTVTIQPAAGKD 534
DL W +VR N+SF+VKQ G G F++EP NL +HSYKYSGL N K V I+ A K
Sbjct: 5 DLQWLLVRNNSSFIVKQKGIGRI---FSREPRNLVQLHSYKYSGLVNAKAVGIE--AAKS 59
Query: 533 SAVVLSTTKTKKQNTPA--KLSHKSVMRK-EFRKMAKAVKNQVGDNYYRPDLTK 381
V+ TTK KQ++ A K + + ++K R+ A AV N V YR DLT+
Sbjct: 60 GKGVVITTKNAKQSSSAIKKTVNVATLKKGGGRRTAGAVSNVVAKKGYRADLTR 113
>emb|CAJ17403.1| ribosomal protein L28e [Meladema coriacea]
Length = 137
Score = 80.9 bits (198), Expect = 5e-14
Identities = 51/123 (41%), Positives = 70/123 (56%), Gaps = 1/123 (0%)
Frame = -2
Query: 710 LIWQIVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNVHSYKYSGLANKKTV-TIQPAAGKD 534
L W I+R NN+FL+K+ N F+ EP+NL N+ S++Y+GL +KKTV I+P K
Sbjct: 5 LSWMIIRNNNAFLLKK---RNINKPFSTEPSNLPNLSSFRYNGLIHKKTVGIIEPKDKKG 61
Query: 533 SAVVLSTTKTKKQNTPAKLSHKSVMRKEFRKMAKAVKNQVGDNYYRPDLTKSALGRLSSV 354
VV K KQN P K + M+ R+ ++ + N YR DLTK AL R S+V
Sbjct: 62 FTVVYK--KANKQNKPRKATVTRTMKXGPRRSLYKLRRLLDKNSYRKDLTKVALRRASAV 119
Query: 353 YRS 345
RS
Sbjct: 120 XRS 122
>gb|AAV34840.1| ribosomal protein L28 [Bombyx mori]
Length = 139
Score = 80.5 bits (197), Expect = 7e-14
Identities = 48/128 (37%), Positives = 71/128 (55%)
Frame = -2
Query: 710 LIWQIVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNVHSYKYSGLANKKTVTIQPAAGKDS 531
L W I+R NN+FLVK+ N K F+KEPNN+ N+HS++Y+GL +KK V + +
Sbjct: 5 LNWMIIRNNNAFLVKK---RNIKKPFSKEPNNVTNLHSFRYNGLIHKKAVGVVENPDRKG 61
Query: 530 AVVLSTTKTKKQNTPAKLSHKSVMRKEFRKMAKAVKNQVGDNYYRPDLTKSALGRLSSVY 351
V+ K K PAK + + R+ VK + N+YR DL K+ L R S++
Sbjct: 62 FTVV-YKKAKATRKPAKNLIRRPFKAGARRSLYKVKRLLKANHYRTDLCKATLRRASAIL 120
Query: 350 RSLQVAKS 327
RS + K+
Sbjct: 121 RSQRPIKA 128
>ref|NP_000982.2| ribosomal protein L28 [Homo sapiens]
gb|AAH10173.1| Ribosomal protein L28 [Homo sapiens]
emb|CAG33305.1| RPL28 [Homo sapiens]
gb|AAX32251.1| ribosomal protein L28 [synthetic construct]
gb|AAH11582.1| Ribosomal protein L28 [Homo sapiens]
sp|P46779|RL28_HUMAN 60S ribosomal protein L28
Length = 137
Score = 80.5 bits (197), Expect = 7e-14
Identities = 49/139 (35%), Positives = 80/139 (57%), Gaps = 1/139 (0%)
Frame = -2
Query: 710 LIWQIVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNVHSYKYSGLANKKTVTIQPAA-GKD 534
L W +VR +SFL+K+ K ++ EPNNL +S++Y+GL ++KTV ++PAA GK
Sbjct: 5 LQWMVVRNCSSFLIKR-----NKQTYSTEPNNLKARNSFRYNGLIHRKTVGVEPAADGKG 59
Query: 533 SAVVLSTTKTKKQNTPAKLSHKSVMRKEFRKMAKAVKNQVGDNYYRPDLTKSALGRLSSV 354
VV+ + Q PA ++ + K R ++++ + N YRPDL +A+ R S++
Sbjct: 60 VVVVIK--RRSGQRKPATSYVRTTINKNARATLSSIRHMIRKNKYRPDLRMAAIRRASAI 117
Query: 353 YRSLQVAKSGVKKKNRQPT 297
RS + VK+K +PT
Sbjct: 118 LRSQKPVM--VKRKRTRPT 134
>gb|EAA10888.3| ENSANGP00000014265 [Anopheles gambiae str. PEST]
ref|XP_315433.2| ENSANGP00000014265 [Anopheles gambiae str. PEST]
Length = 133
Score = 80.5 bits (197), Expect = 7e-14
Identities = 49/128 (38%), Positives = 74/128 (57%)
Frame = -2
Query: 710 LIWQIVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNVHSYKYSGLANKKTVTIQPAAGKDS 531
L W IVR +N+FL+K+ + + F+ EP NL N+ S++YSGL + KT+TI PA K
Sbjct: 7 LNWLIVRDHNAFLLKR---RDIRKPFSTEPGNLTNLSSFRYSGLVHHKTITITPAEKKGV 63
Query: 530 AVVLSTTKTKKQNTPAKLSHKSVMRKEFRKMAKAVKNQVGDNYYRPDLTKSALGRLSSVY 351
V + + K N PAK K +++ R+ K + N + N YR DL +AL R S++
Sbjct: 64 NFVYN--RKKVLNKPAKAPVKVTLKEGPRRTLKKIANMMKANRYRADLRGAALRRASAIL 121
Query: 350 RSLQVAKS 327
RS + K+
Sbjct: 122 RSQRPTKT 129
>gb|AAX43853.1| ribosomal protein L28 [synthetic construct]
Length = 138
Score = 80.5 bits (197), Expect = 7e-14
Identities = 49/139 (35%), Positives = 80/139 (57%), Gaps = 1/139 (0%)
Frame = -2
Query: 710 LIWQIVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNVHSYKYSGLANKKTVTIQPAA-GKD 534
L W +VR +SFL+K+ K ++ EPNNL +S++Y+GL ++KTV ++PAA GK
Sbjct: 5 LQWMVVRNCSSFLIKR-----NKQTYSTEPNNLKARNSFRYNGLIHRKTVGVEPAADGKG 59
Query: 533 SAVVLSTTKTKKQNTPAKLSHKSVMRKEFRKMAKAVKNQVGDNYYRPDLTKSALGRLSSV 354
VV+ + Q PA ++ + K R ++++ + N YRPDL +A+ R S++
Sbjct: 60 VVVVIK--RRSGQRKPATSYVRTTINKNARATLSSIRHMIRKNKYRPDLRMAAIRRASAI 117
Query: 353 YRSLQVAKSGVKKKNRQPT 297
RS + VK+K +PT
Sbjct: 118 LRSQKPVM--VKRKRTRPT 134
>gb|AAH86932.1| Ribosomal protein L28 [Mus musculus]
gb|AAH24395.1| Ribosomal protein L28 [Mus musculus]
ref|NP_033107.1| ribosomal protein L28 [Mus musculus]
dbj|BAB31362.1| unnamed protein product [Mus musculus]
dbj|BAB28192.1| unnamed protein product [Mus musculus]
dbj|BAC36209.1| unnamed protein product [Mus musculus]
gb|AAH97682.1| Unknown (protein for MGC:115078) [Xenopus laevis]
ref|NP_073188.2| ribosomal protein L28 [Rattus norvegicus]
gb|AAH92012.1| Ribosomal protein L28 [Mus musculus]
gb|AAH81800.1| Ribosomal protein L28 [Rattus norvegicus]
sp|P41105|RL28_MOUSE 60S ribosomal protein L28
emb|CAA52848.1| ribosomal protein L28 [Mus musculus]
Length = 137
Score = 80.1 bits (196), Expect = 9e-14
Identities = 49/139 (35%), Positives = 80/139 (57%), Gaps = 1/139 (0%)
Frame = -2
Query: 710 LIWQIVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNVHSYKYSGLANKKTVTIQPAA-GKD 534
L W +VR +SFL+K+ K ++ EPNNL +S++Y+GL ++KTV ++PAA GK
Sbjct: 5 LQWMVVRNCSSFLIKR-----NKQTYSTEPNNLKARNSFRYNGLIHRKTVGVEPAADGKG 59
Query: 533 SAVVLSTTKTKKQNTPAKLSHKSVMRKEFRKMAKAVKNQVGDNYYRPDLTKSALGRLSSV 354
VV+ + Q PA ++ + K R ++++ + N YRPDL +A+ R S++
Sbjct: 60 VVVVMK--RRSGQRKPATSYVRTTINKNARATLSSIRHMIRKNKYRPDLRMAAIRRASAI 117
Query: 353 YRSLQVAKSGVKKKNRQPT 297
RS + VK+K +PT
Sbjct: 118 LRSQKPVV--VKRKRTRPT 134
>gb|AAI02345.1| Hypothetical protein LOC618702 [Bos taurus]
ref|NP_001030580.1| hypothetical protein LOC618702 [Bos taurus]
Length = 137
Score = 79.7 bits (195), Expect = 1e-13
Identities = 49/139 (35%), Positives = 80/139 (57%), Gaps = 1/139 (0%)
Frame = -2
Query: 710 LIWQIVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNVHSYKYSGLANKKTVTIQPAA-GKD 534
L W +VR +SFL+K+ K ++ EPNNL +S++Y+GL ++KTV ++PAA GK
Sbjct: 5 LQWMVVRNCSSFLIKR-----NKQTYSTEPNNLKARNSFRYNGLIHRKTVGVEPAADGKG 59
Query: 533 SAVVLSTTKTKKQNTPAKLSHKSVMRKEFRKMAKAVKNQVGDNYYRPDLTKSALGRLSSV 354
VV+ + Q PA ++ + K R ++++ + N YRPDL +A+ R S++
Sbjct: 60 VVVVMK--RRSGQRKPATSYVRTTINKNARATLSSIRHMIRKNKYRPDLRMAAIRRASAI 117
Query: 353 YRSLQVAKSGVKKKNRQPT 297
RS + VK+K +PT
Sbjct: 118 LRSQKPVM--VKRKPSRPT 134
>gb|EAL30177.1| GA11782-PA [Drosophila pseudoobscura]
Length = 144
Score = 79.3 bits (194), Expect = 2e-13
Identities = 50/132 (37%), Positives = 75/132 (56%)
Frame = -2
Query: 710 LIWQIVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNVHSYKYSGLANKKTVTIQPAAGKDS 531
L W I+R NN+FL+K+ + F+ EPNNL +V SY+YSG+ +KKT+ + P A K
Sbjct: 7 LNWLIIRNNNAFLLKK---RDVNKPFSTEPNNLASVSSYRYSGIVHKKTLGVVPTADKKG 63
Query: 530 AVVLSTTKTKKQNTPAKLSHKSVMRKEFRKMAKAVKNQVGDNYYRPDLTKSALGRLSSVY 351
+ K K PAK + + + R+ K +KN + + YR DLT++AL R S+V
Sbjct: 64 FTAV-LKKGKYAQRPAKNTVRVDFKAGPRRSLKKLKNLLIGSKYRKDLTQAALRRASAVL 122
Query: 350 RSLQVAKSGVKK 315
RS + + KK
Sbjct: 123 RSQKPLPTKGKK 134
>gb|AAA85657.1| ribosomal protein L28
prf||2113200D ribosomal protein L28
Length = 137
Score = 79.3 bits (194), Expect = 2e-13
Identities = 48/139 (34%), Positives = 80/139 (57%), Gaps = 1/139 (0%)
Frame = -2
Query: 710 LIWQIVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNVHSYKYSGLANKKTVTIQPAA-GKD 534
L W +VR +SFL+K+ K ++ EPNNL +S++Y+GL ++KTV ++PAA GK
Sbjct: 5 LQWMVVRNCSSFLIKR-----NKQTYSTEPNNLKARNSFRYNGLIHRKTVGVEPAADGKG 59
Query: 533 SAVVLSTTKTKKQNTPAKLSHKSVMRKEFRKMAKAVKNQVGDNYYRPDLTKSALGRLSSV 354
VV+ + Q PA ++ + K R ++++ + N YRPDL +A+ R S++
Sbjct: 60 VVVVIK--RRSGQRKPATSYVRTTINKNARATLSSIRHMIRKNKYRPDLRMAAIRRASAI 117
Query: 353 YRSLQVAKSGVKKKNRQPT 297
R+ + VK+K +PT
Sbjct: 118 LRTQKPVM--VKRKRTRPT 134
>gb|AAH10182.1| Ribosomal protein L28 [Homo sapiens]
Length = 137
Score = 79.3 bits (194), Expect = 2e-13
Identities = 48/139 (34%), Positives = 80/139 (57%), Gaps = 1/139 (0%)
Frame = -2
Query: 710 LIWQIVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNVHSYKYSGLANKKTVTIQPAA-GKD 534
L W +VR +SFL+K+ K ++ EPNNL +S++Y+GL ++KTV ++PAA GK
Sbjct: 5 LQWMVVRNCSSFLIKR-----NKQTYSTEPNNLKARNSFRYNGLIHRKTVGVEPAADGKG 59
Query: 533 SAVVLSTTKTKKQNTPAKLSHKSVMRKEFRKMAKAVKNQVGDNYYRPDLTKSALGRLSSV 354
VV+ + Q PA ++ + + R ++++ + N YRPDL +A+ R S++
Sbjct: 60 VVVVIK--RRSGQRKPATSYVRTTINRNARATLSSIRHMIRKNKYRPDLRMAAIRRASAI 117
Query: 353 YRSLQVAKSGVKKKNRQPT 297
RS + VK+K +PT
Sbjct: 118 LRSQKPVM--VKRKRTRPT 134
>ref|XP_789202.1| PREDICTED: similar to ribosomal protein L28-like
[Strongylocentrotus purpuratus]
Length = 139
Score = 78.6 bits (192), Expect = 3e-13
Identities = 54/135 (40%), Positives = 77/135 (57%), Gaps = 1/135 (0%)
Frame = -2
Query: 713 DLIWQIVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNVHSYKYSGLANKKTVTIQPAAGKD 534
DL W I+R N+ FL + G G V + EPNNL N +S+KY+GL +KK V ++ AA
Sbjct: 5 DLQWLIIRNNSCFL--KHGGG---VTMSTEPNNLKNRNSFKYNGLIHKKAVGVE-AAADG 58
Query: 533 SAVVLSTTKTK-KQNTPAKLSHKSVMRKEFRKMAKAVKNQVGDNYYRPDLTKSALGRLSS 357
VVL T K K N PAK ++ M+K+ R+ A++ + YR DL +AL R S+
Sbjct: 59 KGVVLVTKKIKGTMNKPAKTFNRVEMKKDSRRTLTAIRRTLKKG-YRKDLKMAALRRASA 117
Query: 356 VYRSLQVAKSGVKKK 312
+ RS + S KK+
Sbjct: 118 IIRSQKPITSVQKKR 132
>gb|AAH86797.1| Ribosomal protein L28 [Mus musculus]
Length = 137
Score = 78.6 bits (192), Expect = 3e-13
Identities = 49/139 (35%), Positives = 79/139 (56%), Gaps = 1/139 (0%)
Frame = -2
Query: 710 LIWQIVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNVHSYKYSGLANKKTVTIQPAA-GKD 534
L W +VR +SFL+K+ K ++ EPNNL +S++Y+GL ++KTV ++PAA GK
Sbjct: 5 LQWMVVRNCSSFLIKR-----NKQTYSTEPNNLKARNSFRYNGLIHRKTVGVEPAADGKG 59
Query: 533 SAVVLSTTKTKKQNTPAKLSHKSVMRKEFRKMAKAVKNQVGDNYYRPDLTKSALGRLSSV 354
VV+ + Q PA ++ + K R +++ + N YRPDL +A+ R S++
Sbjct: 60 VVVVMK--RRSGQRKPATSYVRTTINKNARATLSSIRLMIRKNKYRPDLRMAAIRRASAI 117
Query: 353 YRSLQVAKSGVKKKNRQPT 297
RS + VK+K +PT
Sbjct: 118 LRSQKPVV--VKRKRTRPT 134
>ref|XP_520919.1| PREDICTED: similar to ribosomal protein L28; 60S ribosomal protein
L28 [Pan troglodytes]
Length = 137
Score = 78.6 bits (192), Expect = 3e-13
Identities = 48/139 (34%), Positives = 79/139 (56%), Gaps = 1/139 (0%)
Frame = -2
Query: 710 LIWQIVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNVHSYKYSGLANKKTVTIQPAA-GKD 534
L W +VR +SFL+K+ K ++ EPNNL +S++Y+GL ++KTV ++PAA GK
Sbjct: 5 LQWMVVRNCSSFLIKR-----NKQTYSTEPNNLKARNSFRYNGLIHRKTVGVEPAADGKG 59
Query: 533 SAVVLSTTKTKKQNTPAKLSHKSVMRKEFRKMAKAVKNQVGDNYYRPDLTKSALGRLSSV 354
VV+ + Q PA ++ + K R ++++ + N YRPDL +A+ R ++
Sbjct: 60 VVVVIK--RRSGQRKPATSYVRTTINKNARATLSSIRHMIRKNKYRPDLRMAAIRRARAI 117
Query: 353 YRSLQVAKSGVKKKNRQPT 297
RS + VK+K +PT
Sbjct: 118 LRSQKPVM--VKRKRTRPT 134
>gb|AAV91468.1| ribosomal protein 30 [Lonomia obliqua]
Length = 139
Score = 78.2 bits (191), Expect = 3e-13
Identities = 51/136 (37%), Positives = 78/136 (57%), Gaps = 4/136 (2%)
Frame = -2
Query: 710 LIWQIVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNVHSYKYSGLANKKTVTIQPAAGKDS 531
L W I+R N++F+VK+ N K F+KEPNN+ N++SY+Y+GL +KK V + +
Sbjct: 5 LNWMIIRNNSAFIVKK---RNIKKPFSKEPNNVTNLNSYRYNGLIHKKAVGVVENPDRKG 61
Query: 530 AVVLSTTKTKKQNTPAKLSHKSVMRKEFRKMAK----AVKNQVGDNYYRPDLTKSALGRL 363
V+ K K N P K+++R+ F+ A+ K + N+YR DLTK+ L R
Sbjct: 62 FTVV-YKKAKATNKPV----KNIIRRPFKAGARRSLFKAKRLLKANHYRTDLTKATLRRA 116
Query: 362 SSVYRSLQVAKSGVKK 315
S++ RS + K VKK
Sbjct: 117 SAILRSQRPIK--VKK 130
>emb|CAJ17404.1| ribosomal protein L28e [Sphaerius sp. APV-2005]
Length = 138
Score = 77.4 bits (189), Expect = 6e-13
Identities = 50/138 (36%), Positives = 73/138 (52%), Gaps = 2/138 (1%)
Frame = -2
Query: 710 LIWQIVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNVHSYKYSGLANKKTVTIQPAAGKDS 531
L W IVR NN+FL+K+ N F+ EPNNL N+ SY+YSG+ K+ V ++ K +
Sbjct: 5 LNWLIVRNNNAFLLKK---RNINKPFSMEPNNLKNLSSYRYSGIVRKRVVGVEEPKDK-N 60
Query: 530 AVVLSTTKTKKQNTPAKLSHKSVMRKEFRKMAKAVKNQVGDNYYRPDLTKSALGRLSSVY 351
VL T K+K + K M+ R+ +K + N YR DL K+AL R +++
Sbjct: 61 GFVLVTKKSKNLRQLKRSLTKRTMKSGLRRSLNKLKKTLKANGYRQDLLKAALQRATAIK 120
Query: 350 RSLQ--VAKSGVKKKNRQ 303
RS + AK K K +
Sbjct: 121 RSQKPLPAKKQTKPKKTE 138
>ref|NP_001016714.1| ribosomal protein L28 [Xenopus tropicalis]
Length = 137
Score = 77.4 bits (189), Expect = 6e-13
Identities = 54/136 (39%), Positives = 77/136 (56%), Gaps = 1/136 (0%)
Frame = -2
Query: 710 LIWQIVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNVHSYKYSGLANKKTVTIQPAA-GKD 534
L W ++R +SFLVK+ N ++ F+ EPNNL +S++Y+GL +KKTV ++PAA GK
Sbjct: 5 LQWMVIRNCSSFLVKR----NHRI-FSTEPNNLKARNSFRYNGLIHKKTVGVEPAADGKG 59
Query: 533 SAVVLSTTKTKKQNTPAKLSHKSVMRKEFRKMAKAVKNQVGDNYYRPDLTKSALGRLSSV 354
VVL K Q PA K + K R +V++ + N YR DL +AL R S++
Sbjct: 60 VIVVLK--KRAGQRKPATSYEKITINKNSRSTLSSVRHIIRKNNYRKDLRMAALRRASAI 117
Query: 353 YRSLQVAKSGVKKKNR 306
+S K V KK R
Sbjct: 118 LKS---QKPVVVKKKR 130
>gb|AAH78544.1| Unknown (protein for MGC:85393) [Xenopus laevis]
Length = 137
Score = 77.0 bits (188), Expect = 8e-13
Identities = 55/136 (40%), Positives = 77/136 (56%), Gaps = 1/136 (0%)
Frame = -2
Query: 710 LIWQIVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNVHSYKYSGLANKKTVTIQPAA-GKD 534
L W ++R +SF+VK+ N +V F+ EPNNL +S++Y+GL +KKTV +QPAA GK
Sbjct: 5 LQWMVIRNCSSFIVKR----NHQV-FSTEPNNLKARNSFRYNGLIHKKTVGVQPAADGKG 59
Query: 533 SAVVLSTTKTKKQNTPAKLSHKSVMRKEFRKMAKAVKNQVGDNYYRPDLTKSALGRLSSV 354
VVL K Q PA K + K R +V++ + N YR DL +AL R S++
Sbjct: 60 VIVVLK--KRAGQRKPATSYEKISINKNSRSTLSSVRHIIRKNNYRKDLRMAALRRASAI 117
Query: 353 YRSLQVAKSGVKKKNR 306
+S K V KK R
Sbjct: 118 LKS---QKPVVVKKKR 130
>gb|AAR11386.1| 60S ribosomal protein L28 [Hippocampus comes]
Length = 137
Score = 76.6 bits (187), Expect = 1e-12
Identities = 51/139 (36%), Positives = 79/139 (56%), Gaps = 1/139 (0%)
Frame = -2
Query: 710 LIWQIVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNVHSYKYSGLANKKTVTIQPAA-GKD 534
L W ++R +SFL+K+ K ++ EPNNL +S++++GL +KKTV +QPAA GK
Sbjct: 5 LQWMVIRNCSSFLLKR-----DKQTYSTEPNNLKARNSFRFNGLVHKKTVGVQPAADGKG 59
Query: 533 SAVVLSTTKTKKQNTPAKLSHKSVMRKEFRKMAKAVKNQVGDNYYRPDLTKSALGRLSSV 354
VV+ K Q+ PA +K + K R +V++ + N YR DL +AL R S++
Sbjct: 60 VVVVIK--KRAGQHKPANSYNKITINKNGRATLNSVRHIIRKNNYRKDLRMAALRRASAI 117
Query: 353 YRSLQVAKSGVKKKNRQPT 297
+S + VKKK + T
Sbjct: 118 LKSQKPVV--VKKKRTRAT 134
>emb|CAH57698.1| 60S ribosomal protein L28 [Platichthys flesus]
Length = 137
Score = 76.3 bits (186), Expect = 1e-12
Identities = 49/139 (35%), Positives = 79/139 (56%), Gaps = 1/139 (0%)
Frame = -2
Query: 710 LIWQIVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNVHSYKYSGLANKKTVTIQPAA-GKD 534
L W ++R +SFL+K+ G ++ EPNNL + + ++++GL +KKTV +QPAA GK
Sbjct: 5 LQWMVIRNCSSFLIKRNGQ-----TYSTEPNNLKSRNPFRFNGLVHKKTVGVQPAADGKG 59
Query: 533 SAVVLSTTKTKKQNTPAKLSHKSVMRKEFRKMAKAVKNQVGDNYYRPDLTKSALGRLSSV 354
VVL K + Q+ PA K + K R ++++ + N YR DL +AL R S++
Sbjct: 60 VVVVLK--KRRGQHKPAGSYEKITINKNSRATLNSLRHIIRKNNYRKDLRMAALRRASAI 117
Query: 353 YRSLQVAKSGVKKKNRQPT 297
+S + V+KK + T
Sbjct: 118 LKSQKPVV--VRKKRTRAT 134
>ref|XP_640178.1| hypothetical protein DDB0214936 [Dictyostelium discoideum]
gb|AAG32533.1| ribosomal protein L28 [Dictyostelium discoideum]
sp|Q9GS21|RL28_DICDI 60S ribosomal protein L28
gb|EAL66049.1| hypothetical protein DDB0214936 [Dictyostelium discoideum]
Length = 132
Score = 75.9 bits (185), Expect = 2e-12
Identities = 50/138 (36%), Positives = 72/138 (52%), Gaps = 1/138 (0%)
Frame = -2
Query: 713 DLIWQIVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNVHSYKYSGLANKKTVTIQPAAGKD 534
DL+W I++KNN+FL G + + EP NL N +S KYSGLA + T+ + GK
Sbjct: 4 DLVWSIIKKNNAFLKSSHG-----LTLSAEPGNLRNKNSLKYSGLARRTTIDVAAVNGK- 57
Query: 533 SAVVLSTTKTKKQNTPAKLSHKSVMRK-EFRKMAKAVKNQVGDNYYRPDLTKSALGRLSS 357
VV+S+ KK PA+ + RK A+ VK Y P+L +ALGRL
Sbjct: 58 --VVVSSKIVKKAAFPAQSKKTTTFSTVNTRKTARFVKTLA--TQYAPELRAAALGRLHR 113
Query: 356 VYRSLQVAKSGVKKKNRQ 303
V +L+ AK +K ++
Sbjct: 114 VQSALRSAKKAAARKAKK 131
>gb|AAT68160.1| 60S ribosomal protein L28 [Danio rerio]
ref|NP_957355.1| ribosomal protein L28-like [Danio rerio]
gb|AAH55584.1| Ribosomal protein L28-like [Danio rerio]
Length = 138
Score = 75.1 bits (183), Expect = 3e-12
Identities = 50/138 (36%), Positives = 78/138 (56%), Gaps = 1/138 (0%)
Frame = -2
Query: 710 LIWQIVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNVHSYKYSGLANKKTVTIQPAA-GKD 534
L W ++R ++SFL+K+ K ++ EPNNL ++++++GL ++KT+ I+PAA GK
Sbjct: 6 LQWMVIRNSSSFLIKR-----NKQTYSTEPNNLKARNAFRFNGLIHRKTIGIEPAADGKG 60
Query: 533 SAVVLSTTKTKKQNTPAKLSHKSVMRKEFRKMAKAVKNQVGDNYYRPDLTKSALGRLSSV 354
VVL K Q PA K + K R +V+N + N YR DL +AL R+S++
Sbjct: 61 VVVVLK--KRSGQRKPATSYGKITINKNSRATLASVRNIIRKNKYRRDLRMAALRRVSAI 118
Query: 353 YRSLQVAKSGVKKKNRQP 300
S Q KK++R P
Sbjct: 119 LSS-QKPVVVRKKRSRAP 135
>gb|AAY43419.1| ribosomal protein L28 [Phytophthora infestans]
Length = 139
Score = 74.7 bits (182), Expect = 4e-12
Identities = 48/133 (36%), Positives = 70/133 (52%)
Frame = -2
Query: 710 LIWQIVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNVHSYKYSGLANKKTVTIQPAAGKDS 531
L W + + +SFLVK+ GN +F +E NL N + KYSGLA+ K V I + D
Sbjct: 6 LTWLLTKNTSSFLVKRNGN-----EFAREKFNLLNRNCRKYSGLASTKAVDISIS---DK 57
Query: 530 AVVLSTTKTKKQNTPAKLSHKSVMRKEFRKMAKAVKNQVGDNYYRPDLTKSALGRLSSVY 351
V L+T K PAK + +RK R A ++ + NYYR DL K+AL + S +
Sbjct: 58 KVTLTTKIEKATKKPAKAQNAVPLRKGARGGANTIRANISRNYYRRDLKKAALAKWSRLS 117
Query: 350 RSLQVAKSGVKKK 312
+V + ++KK
Sbjct: 118 TVAKVEQGVLQKK 130
>gb|AAK95155.1| ribosomal protein L28 [Ictalurus punctatus]
Length = 137
Score = 74.7 bits (182), Expect = 4e-12
Identities = 47/139 (33%), Positives = 76/139 (54%), Gaps = 1/139 (0%)
Frame = -2
Query: 710 LIWQIVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNVHSYKYSGLANKKTVTIQPAA-GKD 534
L W ++R N+SFL+K+ G ++ EPNNL ++++++GL ++KTV ++ AA GK
Sbjct: 5 LQWMVIRNNSSFLIKRNGQ-----TYSTEPNNLKARNAFRFNGLIHRKTVGVEQAADGKG 59
Query: 533 SAVVLSTTKTKKQNTPAKLSHKSVMRKEFRKMAKAVKNQVGDNYYRPDLTKSALGRLSSV 354
++L K PAK K + K R ++N + N YR DL +AL R S++
Sbjct: 60 VVIILK--KRAGHRKPAKAYEKITINKNSRTTLNRLRNIIRKNKYRKDLRMAALRRASAI 117
Query: 353 YRSLQVAKSGVKKKNRQPT 297
+S + VKKK + T
Sbjct: 118 LKSQKPVV--VKKKRSRAT 134
>gb|AAX11340.1| ribosomal protein L28 [Haliotis asinina]
Length = 135
Score = 73.9 bits (180), Expect = 7e-12
Identities = 47/139 (33%), Positives = 79/139 (56%), Gaps = 4/139 (2%)
Frame = -2
Query: 713 DLIWQIVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNVHSYKYSGLANKKTVTIQPAAGKD 534
DL W I+R N+SFL+K+ G + + + NNL ++S++Y+GL KKTV ++PA KD
Sbjct: 4 DLQWMIIRNNSSFLLKRPG-----LTISTKKNNLKGINSFRYNGLIRKKTVGVEPA--KD 56
Query: 533 -SAVVLSTTKTKKQNTPAKLSHKSVMRKEFRKMAKAVKNQVGDNYYRPDLTKSALGRLSS 357
VVL T + P K + ++++ R+ ++ + N YR DL +A+ R S+
Sbjct: 57 GKGVVLVTRNSTGGRKPNKSFTRVELKRDPRRTFATIRKTIRRNKYRKDLKMAAVRRASA 116
Query: 356 VYRS---LQVAKSGVKKKN 309
+ RS + V K+G K++
Sbjct: 117 ILRSQKPIVVKKAGRAKRD 135
>gb|AAH53798.1| MGC64430 protein [Xenopus laevis]
Length = 137
Score = 73.9 bits (180), Expect = 7e-12
Identities = 54/136 (39%), Positives = 76/136 (55%), Gaps = 1/136 (0%)
Frame = -2
Query: 710 LIWQIVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNVHSYKYSGLANKKTVTIQPAA-GKD 534
L W IVR +SF+VK+ N +V F+ EPNNL +S++Y+G +KKTV ++PAA GK
Sbjct: 5 LQWMIVRNCSSFIVKR----NHQV-FSTEPNNLKARNSFRYNGPIHKKTVGVEPAADGKG 59
Query: 533 SAVVLSTTKTKKQNTPAKLSHKSVMRKEFRKMAKAVKNQVGDNYYRPDLTKSALGRLSSV 354
VV+ K Q PA K + K R +V++ + N YR DL +AL R S++
Sbjct: 60 VIVVMK--KRAGQRKPATSYEKITINKNSRSTLSSVRHIIRKNNYRKDLRMAALRRASAI 117
Query: 353 YRSLQVAKSGVKKKNR 306
+S K V KK R
Sbjct: 118 LKS---QKPVVVKKKR 130
>ref|XP_664973.1| 60S ribosomal protein L28 [Cryptosporidium hominis TU502]
gb|EAL34743.1| 60S ribosomal protein L28 [Cryptosporidium hominis]
Length = 127
Score = 73.2 bits (178), Expect = 1e-11
Identities = 46/134 (34%), Positives = 71/134 (52%), Gaps = 6/134 (4%)
Frame = -2
Query: 713 DLIWQIVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNVHSYKYSGLANKKTVTIQPAAGKD 534
+L+WQ V+KN SF+ K G FT EP N+ N+++ KYSGLA ++++++ +
Sbjct: 5 ELLWQCVKKNTSFIKKSNG-----FTFTSEPFNIMNLNTLKYSGLAARRSISMDLVPNSN 59
Query: 533 SAVVLSTTKTKKQ------NTPAKLSHKSVMRKEFRKMAKAVKNQVGDNYYRPDLTKSAL 372
+V + TKK P KL K + +F++ K +KNQ+ RPDL A+
Sbjct: 60 GKLVKNAKITKKNTGSSTIRCPKKLISKVNLSNDFKQAKKTIKNQISS---RPDLKNVAI 116
Query: 371 GRLSSVYRSLQVAK 330
R YR +Q AK
Sbjct: 117 IR----YRKIQKAK 126
>sp|P17702|RL28_RAT 60S ribosomal protein L28
emb|CAA36846.1| unnamed protein product [Rattus norvegicus]
prf||1617101B ribosomal protein L28
Length = 137
Score = 73.2 bits (178), Expect = 1e-11
Identities = 45/138 (32%), Positives = 76/138 (55%)
Frame = -2
Query: 710 LIWQIVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNVHSYKYSGLANKKTVTIQPAAGKDS 531
L W +VR +SFL+K+ K ++ EPNNL +S++Y+GL ++KTV ++ A
Sbjct: 5 LQWMVVRNCSSFLIKR-----NKQTYSTEPNNLKARNSFRYNGLIHRKTVGVE-AWPDGK 58
Query: 530 AVVLSTTKTKKQNTPAKLSHKSVMRKEFRKMAKAVKNQVGDNYYRPDLTKSALGRLSSVY 351
VV+ + Q PA ++ + K R ++++ + N YRPDL +A+ R S++
Sbjct: 59 GVVVVMKRRSGQRKPATSYVRTTINKNARATLSSIRHMIRKNKYRPDLRMAAIRRASAIL 118
Query: 350 RSLQVAKSGVKKKNRQPT 297
RS + VK+K +PT
Sbjct: 119 RSQKPVV--VKRKRTRPT 134
>emb|CAH65438.1| hypothetical protein [Gallus gallus]
Length = 138
Score = 72.8 bits (177), Expect = 1e-11
Identities = 45/123 (36%), Positives = 71/123 (57%), Gaps = 1/123 (0%)
Frame = -2
Query: 710 LIWQIVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNVHSYKYSGLANKKTVTIQPAA-GKD 534
L W +VR +SFL+K+ ++ EPNNL + +S++Y+GL ++KT+ ++PA GK
Sbjct: 5 LQWMVVRNCSSFLIKRNHQ-----TYSTEPNNLKSRNSFRYNGLIHRKTLGVEPAPDGKG 59
Query: 533 SAVVLSTTKTKKQNTPAKLSHKSVMRKEFRKMAKAVKNQVGDNYYRPDLTKSALGRLSSV 354
VVL K Q PA + +R+ R ++++ V N YRPDL +AL R S++
Sbjct: 60 VLVVLK--KRSGQRKPAASYDRISIRRNARATLSSLRHLVRKNRYRPDLRMAALRRASAI 117
Query: 353 YRS 345
RS
Sbjct: 118 LRS 120
>ref|XP_625720.1| 60S ribosomal protein L28 [Cryptosporidium parvum Iowa II]
gb|EAK87622.1| 60S ribosomal protein L28 , transcript identified by EST
[Cryptosporidium parvum]
Length = 127
Score = 72.4 bits (176), Expect = 2e-11
Identities = 46/134 (34%), Positives = 70/134 (52%), Gaps = 6/134 (4%)
Frame = -2
Query: 713 DLIWQIVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNVHSYKYSGLANKKTVTIQPAAGKD 534
+L+WQ V+KN SF+ K G FT EP N+ N+++ KYSGLA ++++++ +
Sbjct: 5 ELLWQCVKKNTSFIKKNNG-----FTFTSEPFNIMNLNTLKYSGLAARRSISMDLVPNSN 59
Query: 533 SAVVLSTTKTKKQ------NTPAKLSHKSVMRKEFRKMAKAVKNQVGDNYYRPDLTKSAL 372
+V + TKK P KL K + F++ K +KNQ+ RPDL A+
Sbjct: 60 GKLVKNAKITKKNTGSSTIRCPKKLISKVNLSNNFKQAKKTIKNQISS---RPDLKNVAI 116
Query: 371 GRLSSVYRSLQVAK 330
R YR +Q AK
Sbjct: 117 IR----YRKIQKAK 126
>ref|NP_728841.1| Ribosomal protein L28 CG12740-PC, isoform C [Drosophila
melanogaster]
gb|AAF47743.1| CG12740-PC, isoform C [Drosophila melanogaster]
Length = 165
Score = 71.6 bits (174), Expect = 3e-11
Identities = 43/110 (39%), Positives = 64/110 (58%)
Frame = -2
Query: 710 LIWQIVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNVHSYKYSGLANKKTVTIQPAAGKDS 531
L W I+R NN+FL+K+ + K F+ EPNNL +V SY+YSG+ +KKT+ + PAA K
Sbjct: 7 LNWLIIRNNNAFLLKK---RDVKKPFSTEPNNLASVSSYRYSGIVHKKTLGVVPAADKKG 63
Query: 530 AVVLSTTKTKKQNTPAKLSHKSVMRKEFRKMAKAVKNQVGDNYYRPDLTK 381
+ K K PAK + + + R+ K +KN + + YR DLT+
Sbjct: 64 FTAV-LKKGKYAQRPAKNTVRVDFKAGPRRSLKKLKNLLIGSKYRKDLTQ 112
>pir||T43380 ribosomal protein L28 - fission yeast (Schizosaccharomyces pombe)
(fragment)
dbj|BAA31554.1| ribosomal protein L28 homolog [Schizosaccharomyces pombe]
Length = 123
Score = 68.9 bits (167), Expect = 2e-10
Identities = 44/126 (34%), Positives = 68/126 (53%), Gaps = 3/126 (2%)
Frame = -2
Query: 695 VRKNNSFLVK--QFGNGNAKVQFTKEPNNLYNVHSYKYSGLANKKTVTIQPAAGKDSAVV 522
+R NN FLVK +FG +QF +EP N+ ++ ++SGL N K V +Q A V+
Sbjct: 1 IRDNNRFLVKRPEFGG----IQFNREPVNVSGKNAQRFSGLCNDKAVGVQ-ANSPRGVVL 55
Query: 521 LSTTKTKKQNTPAKLSHKSVM-RKEFRKMAKAVKNQVGDNYYRPDLTKSALGRLSSVYRS 345
++ T K PAKL K V+ RK K++ ++G YR DL K ++ R S++ S
Sbjct: 56 ITKTNPKNAQKPAKLFRKDVIANASSRKTYKSIAGRIGRTGYRDDLVKVSVARASAILSS 115
Query: 344 LQVAKS 327
+ K+
Sbjct: 116 QRPKKT 121
>ref|XP_212890.1| PREDICTED: similar to ribosomal protein L28 [Rattus norvegicus]
Length = 137
Score = 68.9 bits (167), Expect = 2e-10
Identities = 45/139 (32%), Positives = 73/139 (52%), Gaps = 1/139 (0%)
Frame = -2
Query: 710 LIWQIVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNVHSYKYSGLANKKTVTIQPAA-GKD 534
L W +VR +SFL+K+ K ++ EP NL +S+ Y+GL ++KTV ++P A GK
Sbjct: 5 LQWMVVRNCSSFLIKR-----NKQTYSTEPKNLKARNSFGYNGLIHRKTVGVEPTADGKG 59
Query: 533 SAVVLSTTKTKKQNTPAKLSHKSVMRKEFRKMAKAVKNQVGDNYYRPDLTKSALGRLSSV 354
VV+ + Q PA ++ + K R +++ + N Y PDL + R S++
Sbjct: 60 VVVVMK--RRSGQRKPAISYVRTTINKNARATLSSIRQMIRKNKYHPDLRMVTIRRASAI 117
Query: 353 YRSLQVAKSGVKKKNRQPT 297
RS + VK+K +PT
Sbjct: 118 LRSQKPVV--VKRKRTRPT 134
>ref|XP_214103.1| PREDICTED: similar to ribosomal protein L28 [Rattus norvegicus]
Length = 143
Score = 67.8 bits (164), Expect = 5e-10
Identities = 41/123 (33%), Positives = 68/123 (55%), Gaps = 1/123 (0%)
Frame = -2
Query: 710 LIWQIVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNVHSYKYSGLANKKTVTIQPAA-GKD 534
L W +VR +SFL+K+ K ++ EPNNL +S +Y+GL ++KTV ++PAA GK
Sbjct: 5 LQWMVVRNCSSFLIKR-----NKQTYSTEPNNLKARNSLRYNGLIHRKTVGVEPAADGKG 59
Query: 533 SAVVLSTTKTKKQNTPAKLSHKSVMRKEFRKMAKAVKNQVGDNYYRPDLTKSALGRLSSV 354
VV+ + Q PA ++ + K +++ + N YRPDL +A+ S++
Sbjct: 60 VVVVMK--RRSGQRKPATSYVRTTINKNAPATLSSIRQMIRKNKYRPDLRMAAIHMASAI 117
Query: 353 YRS 345
+S
Sbjct: 118 LQS 120
>gb|AAQ76786.1| 60S ribosomal protein L28 [Herdmania curvata]
Length = 118
Score = 66.6 bits (161), Expect = 1e-09
Identities = 37/107 (34%), Positives = 60/107 (56%)
Frame = -2
Query: 638 QFTKEPNNLYNVHSYKYSGLANKKTVTIQPAAGKDSAVVLSTTKTKKQNTPAKLSHKSVM 459
QFT EPNNL N +SY+++GL + KTV ++P + VVL T K P ++ +
Sbjct: 13 QFTTEPNNLKNKNSYRFNGLVHPKTVAVEPDP-EGKGVVLVTKKKGYYRKPQDGFNRVTL 71
Query: 458 RKEFRKMAKAVKNQVGDNYYRPDLTKSALGRLSSVYRSLQVAKSGVK 318
+ R+ ++++ + N YR DL +A+ R S++ RS + AK K
Sbjct: 72 SRGSRRSLRSIRRTIRKNRYRKDLKMAAVRRASALLRSQKPAKVAAK 118
>gb|AAW41987.1| 60s ribosomal protein, putative [Cryptococcus neoformans var.
neoformans JEC21]
ref|XP_569294.1| 60s ribosomal protein [Cryptococcus neoformans var. neoformans
JEC21]
gb|EAL22806.1| hypothetical protein CNBB0270 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 156
Score = 64.3 bits (155), Expect = 5e-09
Identities = 43/124 (34%), Positives = 61/124 (49%), Gaps = 1/124 (0%)
Frame = -2
Query: 713 DLIWQIVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNVHSYKYSGLANKKTVTIQPAAGKD 534
DL W +VR NSF VK G+ V F++E NL N ++KYSGLAN K V+I P+A
Sbjct: 4 DLTWLLVRNWNSFQVK---GGHGPV-FSREKGNLLNKSAHKYSGLANSKVVSIHPSAAGG 59
Query: 533 SAVVLSTTKTKKQNTPAKLSHKSVMRKEF-RKMAKAVKNQVGDNYYRPDLTKSALGRLSS 357
+ K + SH ++ R R+ K + YR DL A+ R S+
Sbjct: 60 ITITKIKADAKPNQVASARSHVTLKRSTGPRRANKIAAAETAGKGYRADLRAVAVARTSA 119
Query: 356 VYRS 345
+ R+
Sbjct: 120 LLRA 123
>ref|XP_620126.2| PREDICTED: similar to ribosomal protein L28 [Mus musculus]
Length = 156
Score = 61.6 bits (148), Expect = 3e-08
Identities = 36/114 (31%), Positives = 63/114 (55%)
Frame = -2
Query: 638 QFTKEPNNLYNVHSYKYSGLANKKTVTIQPAAGKDSAVVLSTTKTKKQNTPAKLSHKSVM 459
+++ EPNNL +S+ Y+GL ++KTV ++ AA VV+ ++ Q PA ++ +
Sbjct: 43 EYSTEPNNLKARNSFCYNGLIHRKTVGVEQAADSKGVVVVMKRRS-GQRKPATSYVRTTI 101
Query: 458 RKEFRKMAKAVKNQVGDNYYRPDLTKSALGRLSSVYRSLQVAKSGVKKKNRQPT 297
K R ++++ + N YRPDL +A+ R ++ RS + VK+K PT
Sbjct: 102 NKNARATLSSIRHMIRKNKYRPDLRMAAIRRARAILRSQKPVV--VKRKRTCPT 153
>ref|NP_506180.1| Ribosomal Protein, Large subunit family member (rpl-28)
[Caenorhabditis elegans]
emb|CAA99898.1| Hypothetical protein R11D1.8 [Caenorhabditis elegans]
sp|Q21930|RL28_CAEEL 60S ribosomal protein L28
Length = 126
Score = 61.6 bits (148), Expect = 3e-08
Identities = 48/132 (36%), Positives = 68/132 (51%)
Frame = -2
Query: 710 LIWQIVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNVHSYKYSGLANKKTVTIQPAAGKDS 531
L+WQ++R N++FL Q G G +F+ E NL V+S KYSGLANK + + AA
Sbjct: 5 LVWQVIRNNSAFLRTQRGIGK---RFSTEKFNLKKVNSPKYSGLANKHAIDVSAAA---K 58
Query: 530 AVVLSTTKTKKQNTPAKLSHKSVMRKEFRKMAKAVKNQVGDNYYRPDLTKSALGRLSSVY 351
VV+ST K PAK S + K + + G N + K A R +++
Sbjct: 59 GVVVSTKNEK--GRPAKAVTTSTLSKTPVASVRRLAKNAGFNKF----NKLAQRRAAAIV 112
Query: 350 RSLQVAKSGVKK 315
RS QV K+ V+K
Sbjct: 113 RS-QVKKAKVQK 123
>ref|XP_512911.1| PREDICTED: similar to ribosomal protein L28; 60S ribosomal protein
L28 [Pan troglodytes]
Length = 217
Score = 59.7 bits (143), Expect = 1e-07
Identities = 35/102 (34%), Positives = 59/102 (57%), Gaps = 1/102 (0%)
Frame = -2
Query: 599 SYKYSGLANKKTVTIQPAA-GKDSAVVLSTTKTKKQNTPAKLSHKSVMRKEFRKMAKAVK 423
S++Y+GL ++KTV ++PAA GK VV+ + Q PA ++ + K R +++
Sbjct: 117 SFRYNGLIHRKTVGVEPAADGKGVVVVIK--RRSGQRKPATSYVRTTINKNARATLSSIR 174
Query: 422 NQVGDNYYRPDLTKSALGRLSSVYRSLQVAKSGVKKKNRQPT 297
+ + N YRPDL +A+ R S++ RS + VK+K +PT
Sbjct: 175 HMIRKNKYRPDLRMAAIRRASAILRSQKPVM--VKRKRTRPT 214
>ref|XP_664104.1| hypothetical protein AN6500.2 [Aspergillus nidulans FGSC A4]
gb|EAA57840.1| hypothetical protein AN6500.2 [Aspergillus nidulans FGSC A4]
Length = 192
Score = 59.3 bits (142), Expect = 2e-07
Identities = 49/178 (27%), Positives = 77/178 (43%), Gaps = 35/178 (19%)
Frame = -2
Query: 734 EMATVPGDLIWQIVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNVHSYK------------ 591
E + V DL+WQ+ R N++LVK+ N + VQF+++P N+ N HS+K
Sbjct: 4 ERSNVSSDLVWQLTRNQNAYLVKR--NTHGGVQFSRDPLNVLNKHSFKDKEKHPLTVTAM 61
Query: 590 -------YSGLANKKTVTIQPA--------------AGKDSAVVLSTTKTKKQNTPAKLS 474
+ G + K I+ + A ++ VV T K PAK
Sbjct: 62 LVRWLLQHQGKSRKPLSMIKLSQEWVLTSNQAIGVQATENGGVVTITKKPGTSQQPAKSL 121
Query: 473 HKSVM--RKEFRKMAKAVKNQVGDNYYRPDLTKSALGRLSSVYRSLQVAKSGVKKKNR 306
RK+ K V ++ N YR DL + A+ R+S++ RS + K +K R
Sbjct: 122 AVVTYGPGASNRKIYKGVADRTAKNGYRADLRQEAVSRVSAIRRSQKAKKETPARKPR 179
>gb|AAY66859.1| ribosomal protein L28 [Ixodes scapularis]
Length = 141
Score = 58.9 bits (141), Expect = 2e-07
Identities = 45/137 (32%), Positives = 67/137 (48%), Gaps = 2/137 (1%)
Frame = -2
Query: 713 DLIWQIVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNVHSYKYSGLANKKTVTIQP-AAGK 537
DL W +V+ + FLVK+ K F+ +P N H+ +YSG K +T++P + GK
Sbjct: 4 DLKWMVVKDRSCFLVKK---RMIKTWFSTDPLNPKGTHAKRYSGTVLNKALTVEPHSTGK 60
Query: 536 DSAVVLSTTKTKKQNTPAKLSHKSVMRKEFRKMAKAVKNQV-GDNYYRPDLTKSALGRLS 360
V L K ++ P K + +RK R+ ++K V G YR DL L R S
Sbjct: 61 --GVNLVYKKQNRRKKPIKSLDRVPLRKGARRTMSSIKKWVKGHRNYRRDLQMLCLRRAS 118
Query: 359 SVYRSLQVAKSGVKKKN 309
++ RS + KKKN
Sbjct: 119 AILRSQKAIVP--KKKN 133
>ref|XP_503934.1| hypothetical protein [Yarrowia lipolytica]
emb|CAG79527.1| unnamed protein product [Yarrowia lipolytica CLIB122]
Length = 183
Score = 56.2 bits (134), Expect = 1e-06
Identities = 42/145 (28%), Positives = 68/145 (46%), Gaps = 2/145 (1%)
Frame = -2
Query: 734 EMATVPGDLIWQIVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNVHSYKYSGLANKKTVTI 555
+M V D IW+ + N++LVK+ G +++P L N+ ++ SGL++ K V +
Sbjct: 44 KMTNVSNDFIWECTKSTNAYLVKRKG---IDTTLSRDPYALNNLSTHYESGLSHDKAVGV 100
Query: 554 QPAAGKDSAVVLSTTKTKKQNTPAKLSHKSVMR--KEFRKMAKAVKNQVGDNYYRPDLTK 381
V+ T K N PAK H + K R +AKAV V Y+ +
Sbjct: 101 HYCKPSGKICVI-TKVVKNANKPAKSRHIVEFKPTKSSRAIAKAVSKTV--QGYKDEQIY 157
Query: 380 SALGRLSSVYRSLQVAKSGVKKKNR 306
A+ R S++ R+ V+K +NR
Sbjct: 158 DAIVRASAIKRAATVSKKQFAARNR 182
>ref|XP_890841.1| PREDICTED: similar to ribosomal protein L28 [Mus musculus]
ref|XP_922343.1| PREDICTED: similar to ribosomal protein L28 [Mus musculus]
Length = 136
Score = 55.8 bits (133), Expect = 2e-06
Identities = 35/118 (29%), Positives = 60/118 (50%)
Frame = -2
Query: 698 IVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNVHSYKYSGLANKKTVTIQPAAGKDSAVVL 519
+V+ SFL+K+ K + EPNNL +S+ Y+ ++KTV +QP VV+
Sbjct: 2 VVQNCFSFLIKR-----KKQTYITEPNNLKARNSFSYNRQIHRKTVRVQPET-DGKGVVV 55
Query: 518 STTKTKKQNTPAKLSHKSVMRKEFRKMAKAVKNQVGDNYYRPDLTKSALGRLSSVYRS 345
T + Q PA ++ + K ++++ + N YRPDL A+ R S++ +S
Sbjct: 56 VTKRRYDQQKPANSYVRTTINKNGLATLSSIRHMIRKNKYRPDLRMEAILRASAILQS 113
>emb|CAE63977.1| Hypothetical protein CBG08569 [Caenorhabditis briggsae]
Length = 126
Score = 54.7 bits (130), Expect = 4e-06
Identities = 44/132 (33%), Positives = 67/132 (50%)
Frame = -2
Query: 710 LIWQIVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNVHSYKYSGLANKKTVTIQPAAGKDS 531
L+WQ++R N++F+ Q G G +F+ E NL V+S KYSGLANK + + A
Sbjct: 5 LVWQVIRNNSAFIRTQRGIGK---RFSTEKFNLKKVNSPKYSGLANKHAIDVSAA---PK 58
Query: 530 AVVLSTTKTKKQNTPAKLSHKSVMRKEFRKMAKAVKNQVGDNYYRPDLTKSALGRLSSVY 351
VV+ST K PAK + + K +++ G + ++ K A R ++
Sbjct: 59 GVVVSTKNEK--GRPAKAVATATLSKTPVASVRSLAKNTGFSKFQ----KLAQRRAAAYV 112
Query: 350 RSLQVAKSGVKK 315
RS QV K+ V K
Sbjct: 113 RS-QVKKTKVPK 123
>emb|CAF89608.1| unnamed protein product [Tetraodon nigroviridis]
Length = 70
Score = 53.5 bits (127), Expect = 9e-06
Identities = 29/65 (44%), Positives = 43/65 (66%), Gaps = 1/65 (1%)
Frame = -2
Query: 710 LIWQIVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNVHSYKYSGLANKKTVTIQPAA-GKD 534
L W ++R +SFL+K+ G ++ EPNNL +S++++GL +KKTV +QPAA GK
Sbjct: 5 LQWMVIRNCSSFLIKRNGQ-----TYSTEPNNLKARNSFRFNGLVHKKTVGVQPAADGKG 59
Query: 533 SAVVL 519
VVL
Sbjct: 60 IVVVL 64
>dbj|BAD92864.1| ribosomal protein L28 variant [Homo sapiens]
Length = 95
Score = 52.4 bits (124), Expect = 2e-05
Identities = 29/71 (40%), Positives = 45/71 (63%), Gaps = 1/71 (1%)
Frame = -2
Query: 728 ATVPGDLIWQIVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNVHSYKYSGLANKKTVTIQP 549
A + L W +VR +SFL+K+ K ++ EPNNL +S++Y+GL ++KTV ++P
Sbjct: 7 AAMSAHLQWMVVRNCSSFLIKR-----NKQTYSTEPNNLKARNSFRYNGLIHRKTVGVEP 61
Query: 548 AA-GKDSAVVL 519
AA GK VV+
Sbjct: 62 AADGKGVVVVI 72
>ref|XP_655185.1| MAK16 protein [Entamoeba histolytica HM-1:IMSS]
gb|EAL49798.1| MAK16 protein, putative [Entamoeba histolytica HM-1:IMSS]
Length = 264
Score = 47.4 bits (111), Expect = 7e-04
Identities = 39/136 (28%), Positives = 61/136 (44%)
Frame = -2
Query: 713 DLIWQIVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNVHSYKYSGLANKKTVTIQPAAGKD 534
DLIW + + GN F + NN+ Y LAN TI+ G
Sbjct: 5 DLIWIQCQHGFCSFKTKACTGN----FCRNRNNVMGECRRLYCPLANSVYATIREFGGN- 59
Query: 533 SAVVLSTTKTKKQNTPAKLSHKSVMRKEFRKMAKAVKNQVGDNYYRPDLTKSALGRLSSV 354
V L T ++ +TPAKL +K ++ K++ K + V + + D Y P L RL+ V
Sbjct: 60 --VYLFTKSIERAHTPAKLWNKLLLDKDYMKALQQVTDTLTDE-YNPKLVHRVKQRLTKV 116
Query: 353 YRSLQVAKSGVKKKNR 306
Y+ L+ + + K+R
Sbjct: 117 YQYLERERKLTQSKDR 132
>ref|XP_828692.1| 60S ribosomal protein L28 [Trypanosoma brucei TREU927]
ref|XP_828694.1| 60S ribosomal protein L28 [Trypanosoma brucei TREU927]
gb|EAN79582.1| 60S ribosomal protein L28, putative [Trypanosoma brucei]
gb|EAN79580.1| 60S ribosomal protein L28, putative [Trypanosoma brucei]
Length = 146
Score = 46.6 bits (109), Expect = 0.001
Identities = 37/116 (31%), Positives = 55/116 (47%)
Frame = -2
Query: 713 DLIWQIVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNVHSYKYSGLANKKTVTIQPAAGKD 534
DL W +VR+N+ FL K+ G ++ + +P N + + SG N K I+ +
Sbjct: 6 DLQWLLVRQNSKFLQKRNG-----IRLSSDPFNNNANWTKRQSGFLNTKAAVIKTKGDR- 59
Query: 533 SAVVLSTTKTKKQNTPAKLSHKSVMRKEFRKMAKAVKNQVGDNYYRPDLTKSALGR 366
+L TTK+ N KL +K + + K + VK V D RPDL K A R
Sbjct: 60 ---ILLTTKSGDTNNKPKLMYKKTVMEPGVK-SSVVKRAVAD--IRPDLAKMAYRR 109
>ref|XP_763632.1| 60S ribosomal protein L28 [Theileria parva strain Muguga]
gb|EAN31349.1| 60S ribosomal protein L28, putative [Theileria parva]
Length = 140
Score = 46.2 bits (108), Expect = 0.001
Identities = 35/128 (27%), Positives = 64/128 (50%), Gaps = 1/128 (0%)
Frame = -2
Query: 725 TVPGDLIWQIVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNVHSYKYSGLANKKTVTIQPA 546
TVP L+W+++R N++FL K + F+ E +NL + H +++G NK + +
Sbjct: 15 TVPDCLLWELLRNNHAFLKK-----SRTTTFSLESHNLLSRHCPRFTGYTNKPSYNV-VL 68
Query: 545 AGKDSAVVLSTTKTKKQNTP-AKLSHKSVMRKEFRKMAKAVKNQVGDNYYRPDLTKSALG 369
S V K P +K+S K++++ K+ +VK V + RPDLT+
Sbjct: 69 NSTASLVTFKKNNLKNSRRPSSKISVKTLIKS--LKLLDSVKTTVRKD--RPDLTELLAR 124
Query: 368 RLSSVYRS 345
+ + + +S
Sbjct: 125 KFTMLVKS 132
>ref|XP_679451.1| hypothetical protein [Plasmodium berghei strain ANKA]
emb|CAH98433.1| conserved hypothetical protein [Plasmodium berghei]
Length = 74
Score = 42.7 bits (99), Expect = 0.016
Identities = 26/75 (34%), Positives = 37/75 (49%)
Frame = -2
Query: 731 MATVPGDLIWQIVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNVHSYKYSGLANKKTVTIQ 552
MA + G L+W++ + NN FL + K + +P NL ++ SGL N V I+
Sbjct: 1 MANISGALVWELTKNNNCFLKR--NKTGKKEKLLCDPYNLRCKNTKNSSGLVNDNAVNIR 58
Query: 551 PAAGKDSAVVLSTTK 507
GK V STTK
Sbjct: 59 LNKGKVVLCVKSTTK 73
>emb|CAJ02970.1| 60S ribosomal protein L28, putative [Leishmania major]
emb|CAJ02962.1| 60S ribosomal protein L28, putative [Leishmania major]
Length = 147
Score = 41.2 bits (95), Expect = 0.047
Identities = 32/140 (22%), Positives = 66/140 (47%), Gaps = 3/140 (2%)
Frame = -2
Query: 713 DLIWQIVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNVHSYKYSGLANKKTVTIQPAAGKD 534
DL W +VR+N+ FL K+ G ++ + +P N + ++ G N+K ++PA G
Sbjct: 6 DLQWVLVRQNSRFLQKRGG-----IRMSNDPFNNNGNWTKRHCGFLNEKAAVVKPAKGGA 60
Query: 533 SAVVL--STTKTKKQNTPAKLSHKSVMR-KEFRKMAKAVKNQVGDNYYRPDLTKSALGRL 363
V + ++ K + T K H + +R + + AV+ + D +R + +
Sbjct: 61 ICVTVKDGSSNNKPRQTYKKTVHAAGVRASDVSRAVAAVRPDLADVSFRRARRMACIASR 120
Query: 362 SSVYRSLQVAKSGVKKKNRQ 303
++ + + A+S K +R+
Sbjct: 121 TAKVAAARKARSEKIKFSRK 140
>ref|XP_821217.1| 60S ribosomal protein L28 [Trypanosoma cruzi strain CL Brener]
gb|EAN99366.1| 60S ribosomal protein L28, putative [Trypanosoma cruzi]
Length = 146
Score = 40.8 bits (94), Expect = 0.061
Identities = 35/130 (26%), Positives = 60/130 (46%), Gaps = 2/130 (1%)
Frame = -2
Query: 713 DLIWQIVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNVHSYKYSGLANKKTVTIQPAAGKD 534
DL W +VR+N+ FL K+ G ++ + +P N + +++G N K ++ K
Sbjct: 6 DLQWLVVRQNSKFLQKRNG-----IRLSSDPFNNNANWTKRHAGFLNTKAAVVKT---KG 57
Query: 533 SAVVLSTTKTKKQNTPAKLSHKSVMRK--EFRKMAKAVKNQVGDNYYRPDLTKSALGRLS 360
++++T K N P + K+VM E ++KAV RPDL A R
Sbjct: 58 DRILVTTKDGKAGNKPKSMYKKAVMDAGVEASVVSKAVA------AVRPDLASIASRRAR 111
Query: 359 SVYRSLQVAK 330
+ +L+ K
Sbjct: 112 KMASTLEHMK 121
>ref|XP_820211.1| 60S ribosomal protein L28 [Trypanosoma cruzi strain CL Brener]
sp|O00822|RL28_TRYCR 60S ribosomal protein L28
gb|EAN98360.1| 60S ribosomal protein L28, putative [Trypanosoma cruzi]
dbj|BAA22425.1| ribosomal protein L28 [Trypanosoma cruzi]
Length = 146
Score = 40.4 bits (93), Expect = 0.080
Identities = 35/130 (26%), Positives = 60/130 (46%), Gaps = 2/130 (1%)
Frame = -2
Query: 713 DLIWQIVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNVHSYKYSGLANKKTVTIQPAAGKD 534
DL W +VR+N+ FL K+ G ++ + +P N + +++G N K ++ K
Sbjct: 6 DLQWLLVRQNSKFLQKRNG-----IRLSSDPFNNNANWTKRHAGFLNTKAAVVKT---KG 57
Query: 533 SAVVLSTTKTKKQNTPAKLSHKSVMRK--EFRKMAKAVKNQVGDNYYRPDLTKSALGRLS 360
++++T K N P + K+VM E ++KAV RPDL A R
Sbjct: 58 DRILVTTKDGKAGNKPKSMYKKAVMDAGVEASVVSKAVA------AVRPDLASIASRRAR 111
Query: 359 SVYRSLQVAK 330
+ +L+ K
Sbjct: 112 KMASTLEHMK 121
>ref|XP_792350.1| PREDICTED: similar to CG32030-PA, isoform A, partial
[Strongylocentrotus purpuratus]
Length = 750
Score = 40.0 bits (92), Expect = 0.10
Identities = 33/141 (23%), Positives = 66/141 (46%), Gaps = 2/141 (1%)
Frame = -2
Query: 716 GDLIWQIVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNVHSYKYSGLANKKTVTIQPA--A 543
G LIW+ R ++ + + + + Y S + + + +KT +PA
Sbjct: 144 GCLIWKRRRNRDTDSESVASTDTTETKKDEPTMSAYVPRSRRRAEVVEEKTPEEKPADKP 203
Query: 542 GKDSAVVLSTTKTKKQNTPAKLSHKSVMRKEFRKMAKAVKNQVGDNYYRPDLTKSALGRL 363
+D++ S+ +T + + ++ S K+V KE +K VK +PD TK G +
Sbjct: 204 AEDTSSTKSSERTPRDRSTSESSDKTVENKELKK-PDYVKE-------KPDETKVVNGDI 255
Query: 362 SSVYRSLQVAKSGVKKKNRQP 300
SSV++ + ++ K ++R+P
Sbjct: 256 SSVHKPKEAVETKAKDESREP 276
>ref|XP_821218.1| 60S ribosomal protein L28 [Trypanosoma cruzi strain CL Brener]
gb|EAN99367.1| 60S ribosomal protein L28, putative [Trypanosoma cruzi]
Length = 146
Score = 39.3 bits (90), Expect = 0.18
Identities = 34/130 (26%), Positives = 59/130 (45%), Gaps = 2/130 (1%)
Frame = -2
Query: 713 DLIWQIVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNVHSYKYSGLANKKTVTIQPAAGKD 534
DL W + R+N+ FL K+ G ++ + +P N + +++G N K ++ K
Sbjct: 6 DLQWLVARQNSKFLQKRNG-----IRLSSDPFNNNANWTKRHAGFLNTKAAVVKT---KG 57
Query: 533 SAVVLSTTKTKKQNTPAKLSHKSVMRK--EFRKMAKAVKNQVGDNYYRPDLTKSALGRLS 360
++++T K N P + K+VM E ++KAV RPDL A R
Sbjct: 58 DRILVTTKDGKAGNKPKSMYKKAVMDAGVEASVVSKAVA------AVRPDLASVASRRAR 111
Query: 359 SVYRSLQVAK 330
+ +L+ K
Sbjct: 112 KMASTLEHMK 121
>emb|CAI75800.1| 60S ribosomal protein l28, putative [Theileria annulata]
ref|XP_955276.1| 60S ribosomal protein L28 [Theileria annulata strain Ankara]
Length = 150
Score = 38.9 bits (89), Expect = 0.23
Identities = 35/141 (24%), Positives = 66/141 (46%), Gaps = 11/141 (7%)
Frame = -2
Query: 734 EMATVPGDLIWQIVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNVHSYKYS---------- 585
+ TVP L+W++VR N++FL K + F+ E +NL + HS +++
Sbjct: 12 QSGTVPDCLLWELVRNNHAFLKK-----SRTTTFSLESHNLLSKHSPRFTVLTQFCITFV 66
Query: 584 GLANKKTVTIQPAAGKDSAVVLSTTKTKKQNTP-AKLSHKSVMRKEFRKMAKAVKNQVGD 408
G NK + + S + L + + P +K S KS+ K+ ++ ++K+ V
Sbjct: 67 GYTNKTSYDV-VLNSTGSLITLKRSNVRNSRRPSSKTSVKSL--KKSLELVNSLKSTVKK 123
Query: 407 NYYRPDLTKSALGRLSSVYRS 345
+ RPDL + + + +S
Sbjct: 124 D--RPDLADLVARKFTMLTKS 142
>ref|XP_522512.1| PREDICTED: similar to KM-102-derived reductase-like factor [Pan
troglodytes]
Length = 1162
Score = 38.9 bits (89), Expect = 0.23
Identities = 26/77 (33%), Positives = 41/77 (53%)
Frame = -2
Query: 683 NSFLVKQFGNGNAKVQFTKEPNNLYNVHSYKYSGLANKKTVTIQPAAGKDSAVVLSTTKT 504
+SFL+K+ K ++ PNNL + + Y+GL +KTV ++PAA S +V+ K
Sbjct: 156 SSFLIKR-----NKQTYSTVPNNLKACNCFHYNGLIQRKTVGVEPAAHGKSFIVVK--KR 208
Query: 503 KKQNTPAKLSHKSVMRK 453
Q PA S M++
Sbjct: 209 SSQWKPATFYPLSEMQQ 225
>sp|Q58058|PGK_METJA Phosphoglycerate kinase
gb|AAB98636.1| phosphoglycerate kinase (pgk) [Methanocaldococcus jannaschii DSM
2661]
ref|NP_247625.1| phosphoglycerate kinase [Methanocaldococcus jannaschii DSM 2661]
Length = 417
Score = 38.1 bits (87), Expect = 0.40
Identities = 30/104 (28%), Positives = 51/104 (49%)
Frame = +3
Query: 234 WRHWINIS*DYGHQRQNTGLVRRLPVLLLDTRLGNLEAAVHRAQPTKGRLGQIRPVIVVA 413
W+ W NI+ ++ T L++RL L D + + AA HRAQP+ P+I
Sbjct: 129 WKKWENIT---PKKQAETNLIKRLAPLF-DYFVNDAFAAAHRAQPSLVGFSYYMPMI-AG 183
Query: 414 NLVFHSLGHLAELLAHYRLVAELRGCVLLLGLGSREDHSRVLSS 545
L+ +G L+++L + + CV +LG +D RV+ +
Sbjct: 184 RLMEREVGVLSKVLENPE-----KPCVYVLGGAKADDSIRVMKN 222
>ref|XP_960199.1| hypothetical protein [Neurospora crassa N150]
ref|XP_325493.1| hypothetical protein [Neurospora crassa]
gb|EAA30963.1| hypothetical protein [Neurospora crassa]
Length = 815
Score = 37.4 bits (85), Expect = 0.68
Identities = 47/195 (24%), Positives = 84/195 (43%), Gaps = 2/195 (1%)
Frame = -2
Query: 776 TERGDAEAPHLRRREMATVPGDLIWQIVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNVHS 597
+ER A+ L E+ + ++++ FL ++ + +V T++ L + H
Sbjct: 382 SERPAADEADLELVELGGIEQVYHASCCKRSSRFLTEKLDSRLRRV--TEDTKRLRDEHE 439
Query: 596 YKYSGLAN--KKTVTIQPAAGKDSAVVLSTTKTKKQNTPAKLSHKSVMRKEFRKMAKAVK 423
LA K T + ++A V K K + +L ++S RK R A ++
Sbjct: 440 KIIKRLAELEAKDATYEARIRNETAHVAERYKQKCEQLEKRLENESEERK--RLEASLIE 497
Query: 422 NQVGDNYYRPDLTKSALGRLSSVYRSLQVAKSGVKKKNRQPTH*ACVLSLVPIVSAYIYP 243
Q G Y P ++ SSV A SG+K +R PTH +P +S+ P
Sbjct: 498 LQTGKRYGVPTASRRTTTS-SSVSTKTIPAPSGLKMPSRPPTH------PLPTISS-SNP 549
Query: 242 MSPTVLRLVRTRANR 198
+ PT++++ A+R
Sbjct: 550 ILPTLVKMPTPIADR 564
>ref|NP_701295.1| hypothetical protein PF11_0437 [Plasmodium falciparum 3D7]
gb|AAN36019.1| hypothetical protein PF11_0437 [Plasmodium falciparum 3D7]
Length = 127
Score = 37.0 bits (84), Expect = 0.89
Identities = 30/100 (30%), Positives = 46/100 (46%), Gaps = 2/100 (2%)
Frame = -2
Query: 731 MATVPGDLIWQIVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNVHSYKYSGL--ANKKTVT 558
M+ V L+W++ RK+N F+ K K F +P N+ ++ SGL +N VT
Sbjct: 1 MSNVSNALVWELTRKSNCFIKK--NKAGKKGVFLCDPLNVNYKNTPSSSGLVKSNSTNVT 58
Query: 557 IQPAAGKDSAVVLSTTKTKKQNTPAKLSHKSVMRKEFRKM 438
+ KD VV S KT K++ K+ K K+
Sbjct: 59 L-----KDGKVVFS-VKTSKESNVVNQHFKAKNMKNVEKL 92
>gb|EAS04028.1| hypothetical protein TTHERM_00994250 [Tetrahymena thermophila
SB210]
Length = 1367
Score = 35.4 bits (80), Expect = 2.6
Identities = 25/98 (25%), Positives = 47/98 (47%), Gaps = 3/98 (3%)
Frame = -2
Query: 701 QIVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNVHSYKYSGLANKKTVTIQPAAGKDSAVV 522
Q ++KN+S+ + + + +QF + N + K S L N + T QP DS+ V
Sbjct: 282 QNMQKNSSYSPENKKSSSPMIQFNYQSVMAVNQKNLKQSQLQNSQQQTNQPLQNNDSSKV 341
Query: 521 ---LSTTKTKKQNTPAKLSHKSVMRKEFRKMAKAVKNQ 417
S +K + N+ +L +S + + ++A+ NQ
Sbjct: 342 QQSQSGSKGQSMNSSLQLKRQSGEQSKLNLFSEALANQ 379
>ref|ZP_00660990.1| Chorismate mutase [Prosthecochloris vibrioformis DSM 265]
gb|EAO15580.1| Chorismate mutase [Prosthecochloris vibrioformis DSM 265]
Length = 145
Score = 35.4 bits (80), Expect = 2.6
Identities = 29/114 (25%), Positives = 51/114 (44%), Gaps = 4/114 (3%)
Frame = -2
Query: 659 GNGNAKVQFTKEPNNLYNVHSYKYSGLANKKTVTIQPAAGKDSAVVLSTTKTKKQNTPAK 480
GN ++ T E + ++SY + ANK+ T+ PA + + L + K K
Sbjct: 11 GNFSSNANRTAETD----LYSYSPNSTANKEMTTLDPANQEACRIRLDDWRKKIDAIDLK 66
Query: 479 LSHKSVMRKEFRKMAKAVKNQVGDNYYRPDLTK----SALGRLSSVYRSLQVAK 330
LS R + A+K ++G+ +P+ K + LGR SS ++ + K
Sbjct: 67 LSALLCERLHCAENISALKAEIGEQVLQPEREKEVLDNVLGRTSSELQTRALEK 120
>gb|EAS07440.1| hypothetical protein TTHERM_00571760 [Tetrahymena thermophila SB210]
Length = 1563
Score = 34.7 bits (78), Expect = 4.4
Identities = 26/90 (28%), Positives = 38/90 (42%), Gaps = 15/90 (16%)
Frame = -2
Query: 617 NLYNVHSYKYSGLANKKTVTIQPAAGKDSAVVLSTTKTKKQN---------------TPA 483
N YN SYK + KK + DS+++ TTK +KQN T
Sbjct: 1254 NHYNAFSYKQFIMNMKKNL--------DSSLIKETTKKQKQNDSFIKKVQTNKKPIATGN 1305
Query: 482 KLSHKSVMRKEFRKMAKAVKNQVGDNYYRP 393
+ K+ K+F K+ K + Q+ N RP
Sbjct: 1306 LQNDKNSQNKDFEKLNKLIDQQIQKNVIRP 1335
>ref|ZP_00629981.1| Amidohydrolase [Paracoccus denitrificans PD1222]
gb|EAN66898.1| Amidohydrolase [Paracoccus denitrificans PD1222]
Length = 490
Score = 34.7 bits (78), Expect = 4.4
Identities = 23/50 (46%), Positives = 30/50 (60%), Gaps = 2/50 (4%)
Frame = +3
Query: 399 VIVVANLVFHSLGHLAELLAHYRLV--AELRGCVLLLGLGSREDHSRVLS 542
V+V+ LV H++G AEL AHY L +L G +LL GL + H R LS
Sbjct: 23 VVVIDGLV-HAIGPRAELRAHYPLARRLDLGGSLLLPGLINAHQHGRGLS 71
>gb|AAW24596.1| SJCHGC09242 protein [Schistosoma japonicum]
Length = 172
Score = 34.3 bits (77), Expect = 5.8
Identities = 29/90 (32%), Positives = 40/90 (44%), Gaps = 3/90 (3%)
Frame = +2
Query: 326 QTWQPGGCGTQSSAYQGPTWSDQACNSCRQPGFSQPWPSCG---TPCALQTCG*ASRVCS 496
Q WQ + GP +D+A QPG ++PWPS G T AL A+R +
Sbjct: 20 QHWQTEPWPSLGKQSPGPALADRAL---AQPGQTEPWPSTGKQNTGPAL-----ANRALA 71
Query: 497 ASWSW**RGPQPSPFQQLAGSLQFSCLLSQ 586
W P PSP +Q G + + L+Q
Sbjct: 72 QHWQ---TEPWPSPGKQSPGPARANRALAQ 98
>ref|ZP_00695250.1| hypothetical protein RferDRAFT_4160 [Rhodoferax ferrireducens DSM
15236]
gb|EAO38616.1| hypothetical protein RferDRAFT_4160 [Rhodoferax ferrireducens DSM
15236]
Length = 413
Score = 33.9 bits (76), Expect = 7.5
Identities = 19/66 (28%), Positives = 31/66 (46%)
Frame = +3
Query: 228 NCWRHWINIS*DYGHQRQNTGLVRRLPVLLLDTRLGNLEAAVHRAQPTKGRLGQIRPVIV 407
N +R+W + + N G R LP + +R EA +H T + QIRPV+V
Sbjct: 52 NGFRNWTEVQ----NLSNNVGQDRSLPAWHIHSRNARHEAYLHALWQTDAEMSQIRPVVV 107
Query: 408 VANLVF 425
+ + +
Sbjct: 108 LGEVEY 113
>gb|EAR87944.1| hypothetical protein TTHERM_00011040 [Tetrahymena thermophila
SB210]
Length = 1621
Score = 33.9 bits (76), Expect = 7.5
Identities = 22/92 (23%), Positives = 38/92 (41%)
Frame = -2
Query: 680 SFLVKQFGNGNAKVQFTKEPNNLYNVHSYKYSGLANKKTVTIQPAAGKDSAVVLSTTKTK 501
S +++ N N +QF PN N + Y+ + + TI+P K A L T +K
Sbjct: 614 SIQTERYNNNNKLIQFQYIPNE-QNTSADNYNKQIDDQDTTIKPVTSKQPAYSLHQTGSK 672
Query: 500 KQNTPAKLSHKSVMRKEFRKMAKAVKNQVGDN 405
N +L K + + ++ +N N
Sbjct: 673 PLNQAQQLVQKYIQSSFHQSSQQSQRNNPSAN 704
>emb|CAE68183.1| Hypothetical protein CBG13843 [Caenorhabditis briggsae]
Length = 315
Score = 33.9 bits (76), Expect = 7.5
Identities = 17/55 (30%), Positives = 29/55 (52%)
Frame = -3
Query: 202 IVLRCCRLSFYSKNSMTKIAWHLIAALFASWLAGITSDFCWVLEHVCLASYWVLL 38
I ++CC + F+ NS T I ++++A + S + CW + H C A +V L
Sbjct: 238 IFIQCCIICFF--NSCTAIFYNVLAFITPSPAILVFGQLCWSINHGCPALIYVTL 290
>emb|CAE68185.1| Hypothetical protein CBG13845 [Caenorhabditis briggsae]
Length = 330
Score = 33.9 bits (76), Expect = 7.5
Identities = 17/55 (30%), Positives = 29/55 (52%)
Frame = -3
Query: 202 IVLRCCRLSFYSKNSMTKIAWHLIAALFASWLAGITSDFCWVLEHVCLASYWVLL 38
I ++CC + F+ NS T I ++++A + S + CW + H C A +V L
Sbjct: 240 IFIQCCIICFF--NSCTAIFYNVLAFITPSPAILVFGQLCWSINHGCPALIYVTL 292
>ref|YP_052907.1| ribosomal protein S2 [Saprolegnia ferax]
gb|AAT40661.1| ribosomal protein S2 [Saprolegnia ferax]
Length = 198
Score = 33.9 bits (76), Expect = 7.5
Identities = 19/74 (25%), Positives = 39/74 (52%)
Frame = -2
Query: 683 NSFLVKQFGNGNAKVQFTKEPNNLYNVHSYKYSGLANKKTVTIQPAAGKDSAVVLSTTKT 504
+SF +K + + K+ FT++ N+ + +GL KTV+ K + ++L +KT
Sbjct: 83 DSFDIKFLLSESKKINFTQKNKNIILKNDIWINGLLTNKTVSNFLKHNKINLIILLKSKT 142
Query: 503 KKQNTPAKLSHKSV 462
K+ + +HK++
Sbjct: 143 KENYLLTEFNHKNI 156
>ref|XP_576183.1| PREDICTED: transcription elongation factor B polypeptide 3 binding
protein 1 (predicted) [Rattus norvegicus]
Length = 1197
Score = 33.9 bits (76), Expect = 7.5
Identities = 35/120 (29%), Positives = 47/120 (39%), Gaps = 5/120 (4%)
Frame = -2
Query: 641 VQFTKEPNNLYNVHSYKYSGLANKKTVTIQPA----AGKDSAVVLS-TTKTKKQNTPAKL 477
++ TKE Y+V A ++P+ A +D+ V K KK TPA L
Sbjct: 307 LRVTKEMAVQYDVEDLGQPPKAPDTVSVVKPSSPARASQDAGVPKEGKAKKKKSGTPASL 366
Query: 476 SHKSVMRKEFRKMAKAVKNQVGDNYYRPDLTKSALGRLSSVYRSLQVAKSGVKKKNRQPT 297
SHK +RK+ +K K G D K + SS R G KKK T
Sbjct: 367 SHKDKVRKKDKKKEKDPARPRGKEKVCADRKKLS----SSSPRGKAQGLEGTKKKPSSAT 422
>ref|XP_665459.1| hypothetical protein Chro.30323 [Cryptosporidium hominis TU502]
gb|EAL35230.1| hypothetical protein Chro.30323 [Cryptosporidium hominis]
Length = 97
Score = 33.5 bits (75), Expect = 9.8
Identities = 21/60 (35%), Positives = 34/60 (56%)
Frame = -2
Query: 521 LSTTKTKKQNTPAKLSHKSVMRKEFRKMAKAVKNQVGDNYYRPDLTKSALGRLSSVYRSL 342
L++ K K + + K++ RK+F+K KAV ++ DN + D S+ GR S + RSL
Sbjct: 39 LNSKKDKIKVDKKNIISKAIERKKFKKNKKAVNRKLSDNRKKDDDIISS-GRTSLILRSL 97
>ref|ZP_00593836.1| Cation efflux protein [Ralstonia metallidurans CH34]
gb|EAN54126.1| Cation efflux protein [Ralstonia metallidurans CH34]
Length = 337
Score = 33.5 bits (75), Expect = 9.8
Identities = 30/75 (40%), Positives = 39/75 (52%), Gaps = 3/75 (4%)
Frame = +3
Query: 264 YGHQRQNTGLVRRLPVLLLDTRLGNLEAAVHRAQPTKGRLGQIRPVIVVANLVFHSLGHL 443
YGHQR T + LLL +G L AAV + Q G ++PV +A ++ +LG L
Sbjct: 109 YGHQRFETAASLAIGALLLAVGVGMLWAAVGKIQHPNG----VQPVQTIA--IWMALGAL 162
Query: 444 A--ELLAHYRL-VAE 479
ELL Y L VAE
Sbjct: 163 VAKELLFRYMLRVAE 177
>gb|EAR99887.1| cyclic nucleotide-binding domain containing protein [Tetrahymena
thermophila SB210]
Length = 1472
Score = 33.5 bits (75), Expect = 9.8
Identities = 25/97 (25%), Positives = 38/97 (39%), Gaps = 13/97 (13%)
Frame = -2
Query: 638 QFTKEPNNLYNVHS------YKYSGLANKKTVTIQPAAGKDSAVVLSTTKTKKQNT---- 489
QFT +PNN Y + +Y N+ + IQ DS K KK N
Sbjct: 747 QFTAKPNNEYEANDGSNKCIEQYDQSQNQNSSIIQKLFDPDSYYKKLQLKIKKANDIKQT 806
Query: 488 ---PAKLSHKSVMRKEFRKMAKAVKNQVGDNYYRPDL 387
P KL H ++ ++ + +NQ D+ P +
Sbjct: 807 KYQPQKLDHNKILNLDYTPQSSRKENQNQDSNKSPKI 843
>gb|EAR92179.1| Ser/Thr protein phosphatase family protein [Tetrahymena thermophila
SB210]
Length = 607
Score = 33.5 bits (75), Expect = 9.8
Identities = 23/101 (22%), Positives = 44/101 (43%)
Frame = -2
Query: 683 NSFLVKQFGNGNAKVQFTKEPNNLYNVHSYKYSGLANKKTVTIQPAAGKDSAVVLSTTKT 504
N+ +K GN N + + ++H + ++K + I P + AVV++T+ +
Sbjct: 113 NNLFIKFLGNENNLLNLQDPLTVVGDIHGQSFKSSSSKSKIFISPLKPNNKAVVINTSSS 172
Query: 503 KKQNTPAKLSHKSVMRKEFRKMAKAVKNQVGDNYYRPDLTK 381
S +++ K +++QVG N PD TK
Sbjct: 173 FSLPFDINQQIYSNLKQFNLKFYARIQSQVGGN---PDNTK 210
Database: nr
Posted date: Apr 6, 2006 2:41 PM
Number of letters in database: 1,185,965,366
Number of sequences in database: 3,454,138
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,810,300,079
Number of Sequences: 3454138
Number of extensions: 40206165
Number of successful extensions: 121405
Number of sequences better than 10.0: 100
Number of HSP's better than 10.0 without gapping: 115194
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 121250
length of database: 1,185,965,366
effective HSP length: 128
effective length of database: 743,835,702
effective search space used: 107112341088
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)