BLASTX 2.2.6 [Apr-09-2003]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 131537.2.458
(708 letters)
Database: nr
3,454,138 sequences; 1,185,965,366 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAL59231.1| ribosomal protein L35A [Zea mays] 220 4e-56
gb|AAK73115.1| ribosomal protein L35A [Zea mays] 219 6e-56
ref|XP_468159.1| putative ribosomal protein L35A [Oryza sat... 219 7e-56
gb|AAK25760.1| ribosomal protein L33 [Castanea sativa] 203 4e-51
ref|NP_177567.1| structural constituent of ribosome [Arabid... 200 4e-50
ref|NP_172188.1| structural constituent of ribosome [Arabid... 200 4e-50
ref|XP_475896.1| putative ribosomal protein L35A [Oryza sat... 198 2e-49
ref|NP_191134.1| structural constituent of ribosome [Arabid... 195 1e-48
ref|NP_174951.1| structural constituent of ribosome [Arabid... 195 1e-48
gb|AAV64217.1| rpl35A [Zea mays] 182 8e-45
emb|CAI75801.1| 60S ribosomal protein l35a, putative [Theil... 146 8e-34
ref|XP_763631.1| 60S ribosomal protein L35a [Theileria parv... 143 7e-33
gb|AAY43422.1| ribosomal protein L35 [Phytophthora infestans] 132 2e-29
ref|NP_701296.1| Ribosomal protein, putative [Plasmodium fa... 127 5e-28
ref|XP_628426.1| 60S ribosomal protein L35A , [Cryptosporid... 125 1e-27
gb|AAS51346.1| ACR120Cp [Ashbya gossypii ATCC 10895] >gi|45... 124 3e-27
gb|AAK92169.1| ribosomal protein L35A [Spodoptera frugiperda] 121 2e-26
ref|XP_760773.1| hypothetical protein UM04626.1 [Ustilago m... 121 2e-26
gb|AAY66948.1| ribosomal protein L35a [Ixodes scapularis] 120 5e-26
ref|XP_739385.1| Ribosomal protein [Plasmodium chabaudi cha... 120 5e-26
ref|XP_726239.1| ribosomal protein L35Ae [Plasmodium yoelii... 120 6e-26
gb|AAW44222.1| 60s ribosomal protein l33-b, putative [Crypt... 120 6e-26
gb|EAL19965.1| hypothetical protein CNBF2920 [Cryptococcus ... 120 6e-26
ref|XP_453392.1| unnamed protein product [Kluyveromyces lac... 119 1e-25
emb|CAG62430.1| unnamed protein product [Candida glabrata C... 119 1e-25
ref|XP_679452.1| Ribosomal protein [Plasmodium berghei stra... 119 1e-25
emb|CAJ17422.1| ribosomal protein L35Ae [Sphaerius sp. APV-... 118 2e-25
ref|XP_660584.1| hypothetical protein AN2980.2 [Aspergillus... 118 2e-25
ref|NP_015182.1| N-terminally acetylated ribosomal protein ... 118 2e-25
gb|AAA82422.1| Ribosomal protein, large subunit protein 33 ... 117 3e-25
emb|CAE67541.1| Hypothetical protein CBG13066 [Caenorhabdit... 117 4e-25
gb|AAY86759.1| 60S ribosomal protein L33-A [Chaetomium glob... 117 4e-25
ref|XP_655059.1| 60S ribosomal protein L35a [Entamoeba hist... 117 5e-25
ref|NP_014877.1| Ribosomal protein L37 of the large (60S) r... 116 7e-25
gb|AAP06414.1| similar to GenBank Accession Number AF400197... 116 9e-25
ref|XP_381454.1| conserved hypothetical protein [Gibberella... 116 9e-25
ref|XP_623272.1| PREDICTED: similar to ribosomal protein L3... 115 1e-24
gb|AAV34847.1| ribosomal protein L35A [Bombyx mori] 115 1e-24
gb|AAX62468.1| ribosomal protein L35a [Lysiphlebus testacei... 115 1e-24
gb|AAX48869.1| L35a [Suberites domuncula] 115 1e-24
ref|XP_422734.1| PREDICTED: similar to ribosomal protein L3... 113 6e-24
gb|AAH53771.1| Rpl35a-prov protein [Xenopus laevis] 113 7e-24
emb|CAA38849.1| ribosomal protein L32 [Xenopus laevis] >gi|... 113 7e-24
gb|AAH77673.1| MGC89840 protein [Xenopus tropicalis] >gi|52... 113 7e-24
sp|Q9USX4|RL33A_SCHPO 60S ribosomal protein L33-A (L37A) 112 2e-23
dbj|BAB22541.1| unnamed protein product [Mus musculus] 111 3e-23
ref|XP_650327.1| 60S ribosomal protein L35a [Entamoeba hist... 111 3e-23
ref|XP_506094.1| hypothetical protein [Yarrowia lipolytica]... 111 3e-23
gb|AAK95162.1| ribosomal protein L35a [Ictalurus punctatus]... 111 3e-23
gb|AAH61557.1| Ribosomal protein L35a [Rattus norvegicus] >... 110 4e-23
emb|CAJ17420.1| ribosomal protein L35Ae [Carabus granulatus] 110 5e-23
emb|CAG86466.1| unnamed protein product [Debaryomyces hanse... 110 5e-23
gb|AAY21901.1| ribosomal protein L35a [Cirrhinus molitorella] 110 5e-23
ref|NP_000987.2| ribosomal protein L35a [Homo sapiens] >gi|... 110 5e-23
gb|AAX36977.1| ribosomal protein L35a [synthetic construct] 110 5e-23
gb|AAW82114.1| RPL35A protein [Bos taurus] >gi|70778730|ref... 110 6e-23
ref|XP_504662.1| hypothetical protein [Yarrowia lipolytica]... 110 6e-23
emb|CAJ17421.1| ribosomal protein L35Ae [Cicindela campestris] 109 8e-23
gb|AAH76321.1| Hypothetical protein LOC436760 [Danio rerio]... 109 8e-23
dbj|BAC32698.1| unnamed protein product [Mus musculus] 108 1e-22
emb|CAB58374.1| SPCP31B10.08c [Schizosaccharomyces pombe] >... 108 2e-22
gb|AAX79036.1| 60S ribosomal protein L35A, putative [Trypan... 108 2e-22
emb|CAG02142.1| unnamed protein product [Tetraodon nigrovir... 108 2e-22
ref|XP_821812.1| ribosomal protein L35A [Trypanosoma cruzi ... 107 3e-22
emb|CAJ07960.1| ribosomal protein l35a, putative [Leishmani... 107 3e-22
emb|CAA37138.1| unnamed protein product [Homo sapiens] 107 3e-22
ref|XP_646794.1| 60S ribosomal protein L35a [Dictyostelium ... 107 4e-22
gb|AAV84243.1| ribosomal protein L35 [Culicoides sonorensis] 107 5e-22
ref|XP_489548.2| PREDICTED: similar to ribosomal protein L3... 106 7e-22
dbj|BAA33367.1| ribosomal protein L37 homolog [Schizosaccha... 106 7e-22
gb|AAR10024.1| similar to Drosophila melanogaster CG2099 [D... 105 1e-21
gb|AAR09815.1| similar to Drosophila melanogaster CG2099 [D... 105 1e-21
gb|AAL49354.1| RH44960p [Drosophila melanogaster] >gi|21356... 105 1e-21
gb|EAA07823.3| ENSANGP00000022149 [Anopheles gambiae str. P... 105 2e-21
ref|XP_946171.1| PREDICTED: similar to ribosomal protein L3... 105 2e-21
ref|XP_909195.1| PREDICTED: similar to ribosomal protein L3... 105 2e-21
ref|XP_620305.1| PREDICTED: similar to ribosomal protein L3... 105 2e-21
gb|EAL28507.1| GA15239-PA [Drosophila pseudoobscura] 104 3e-21
ref|XP_754768.1| 60s ribosomal protein l37b [Aspergillus fu... 103 5e-21
ref|XP_213045.1| PREDICTED: similar to ribosomal protein L3... 102 1e-20
ref|XP_785082.1| PREDICTED: similar to ribosomal protein L3... 102 2e-20
ref|XP_213423.1| PREDICTED: similar to ribosomal protein L3... 102 2e-20
ref|XP_619992.1| PREDICTED: similar to ribosomal protein L3... 99 1e-19
gb|EAQ93367.1| conserved hypothetical protein [Chaetomium g... 97 7e-19
ref|XP_896020.1| PREDICTED: similar to ribosomal protein L3... 96 9e-19
ref|NP_001018813.1| hypothetical protein SPBC1921.01c [Schi... 96 9e-19
ref|XP_958318.1| hypothetical protein [Neurospora crassa N1... 96 1e-18
ref|XP_923150.1| PREDICTED: similar to ribosomal protein L3... 96 2e-18
ref|NP_001027677.1| r35a protein [Ciona intestinalis] >gi|2... 95 2e-18
ref|XP_487671.2| PREDICTED: similar to ribosomal protein L3... 91 3e-17
emb|CAI15713.1| ribosomal protein L35a pseudogene 3 [Homo s... 83 1e-14
gb|AAY97887.1| unknown [Schistosoma japonicum] 82 2e-14
ref|XP_770097.1| ribosomal protein L35a [Giardia lamblia AT... 80 9e-14
emb|CAA24701.1| unnamed protein product [Xenopus laevis] 79 2e-13
gb|AAK08095.1| putative 60S ribosomal protein L35a [Ceratit... 70 9e-11
gb|AAP78707.1| ribosomal protein L35a [Equus caballus] 59 1e-07
ref|XP_896905.1| PREDICTED: similar to ribosomal protein L3... 59 2e-07
pdb|1SQR|A Chain A, Solution Structure Of The 50s Ribosomal... 58 4e-07
sp|P20299|RL35A_PYRWO 50S ribosomal protein L35Ae 57 5e-07
emb|CAB49307.1| rpl35AE LSU ribosomal protein L35AE [Pyroco... 57 5e-07
gb|AAL81996.1| LSU ribosomal protein L35AE; (rpl35AE) [Pyro... 57 5e-07
dbj|BAA30949.1| 87aa long hypothetical 50S ribosomal protei... 57 8e-07
gb|AAR39151.1| NEQ303 [Nanoarchaeum equitans Kin4-M] >gi|41... 53 9e-06
gb|EAR83273.1| hypothetical protein TTHERM_00992730 [Tetrah... 53 9e-06
ref|NP_584615.1| 60S RIBOSOMAL PROTEIN L35A (L33) [Encephal... 53 1e-05
gb|AAM01372.1| Ribosomal protein L35AE/L33A [Methanopyrus k... 52 2e-05
gb|EAR83272.1| hypothetical protein TTHERM_00992720 [Tetrah... 52 2e-05
emb|CAB58967.1| rpl37-1 [Schizosaccharomyces pombe] >gi|752... 52 3e-05
gb|ABB46359.1| ribosomal protein L35a [Ovis aries] 47 7e-04
ref|ZP_01155762.1| Parallel beta-helix repeat protein [Ocea... 37 0.52
dbj|BAA81336.1| 133aa long hypothetical 50S ribosomal prote... 37 0.89
dbj|BAD85158.1| LSU ribosomal protein L35AE [Thermococcus k... 35 2.0
gb|EAM74488.1| Aminoacyl-tRNA synthetase, class Ia [Kineoco... 35 2.0
ref|ZP_00862776.1| putative Cytochrome P450 [Bradyrhizobium... 35 2.6
dbj|BAD31759.1| hypothetical protein [Oryza sativa (japonic... 35 3.4
ref|ZP_00569081.1| Short-chain dehydrogenase/reductase SDR ... 35 3.4
dbj|BAC85239.1| unnamed protein product [Homo sapiens] 34 4.4
gb|AAC51251.1| Ig heavy chain variable region [Homo sapiens] 34 4.4
gb|AAF25430.1| RecA protein [Micrococcus luteus] 34 5.7
ref|ZP_00136488.2| COG0583: Transcriptional regulator [Pseu... 34 5.7
ref|ZP_00968508.1| COG0583: Transcriptional regulator [Pseu... 34 5.7
gb|AAG06512.1| probable transcriptional regulator [Pseudomo... 34 5.7
ref|XP_526809.1| PREDICTED: similar to wolframin [Pan trogl... 34 5.7
gb|ABA99441.1| hypothetical protein LOC_Os12g43010 [Oryza s... 33 7.5
gb|AAB04535.1| anti-PAH immunoglobulin Fab 10C10 heavy chai... 33 7.5
ref|XP_693512.1| PREDICTED: similar to diacylglycerol kinas... 33 7.5
ref|XP_693499.1| PREDICTED: similar to diacylglycerol kinas... 33 7.5
gb|ABB07007.1| protein of unknown function DUF82 [Burkholde... 33 7.5
>gb|AAL59231.1| ribosomal protein L35A [Zea mays]
Length = 112
Score = 220 bits (560), Expect = 4e-56
Identities = 106/112 (94%), Positives = 108/112 (96%)
Frame = +1
Query: 97 MVKGRTGQRVRLYVRGTVLGYKRSKSNQYETTSLVQIEGVNTKEDVAWYCGKRMAYIYKA 276
MVKGRTGQRVRLYVRGT+LGYKRSKSNQYETTSLVQIEGVNTKEDVAWY GKRMAYIYKA
Sbjct: 1 MVKGRTGQRVRLYVRGTILGYKRSKSNQYETTSLVQIEGVNTKEDVAWYAGKRMAYIYKA 60
Query: 277 KTKSSGTHYRCIWGKVARPHGNSGVVRAKFRSNLPPESMGRKVRVFMYPSSI 432
KTKSS T YRCIWGKV RPHGNSGVVRAKF+SNLPPESMGRKVRVFMYPSSI
Sbjct: 61 KTKSSETRYRCIWGKVTRPHGNSGVVRAKFKSNLPPESMGRKVRVFMYPSSI 112
>gb|AAK73115.1| ribosomal protein L35A [Zea mays]
Length = 112
Score = 219 bits (559), Expect = 6e-56
Identities = 105/112 (93%), Positives = 108/112 (96%)
Frame = +1
Query: 97 MVKGRTGQRVRLYVRGTVLGYKRSKSNQYETTSLVQIEGVNTKEDVAWYCGKRMAYIYKA 276
MVKGRTGQRVRLYVRGT+LGYKRSKSNQYETTSLVQIEGVNTKEDVAWY GKRMAYIYKA
Sbjct: 1 MVKGRTGQRVRLYVRGTILGYKRSKSNQYETTSLVQIEGVNTKEDVAWYAGKRMAYIYKA 60
Query: 277 KTKSSGTHYRCIWGKVARPHGNSGVVRAKFRSNLPPESMGRKVRVFMYPSSI 432
KTKSS T YRCIWGK+ RPHGNSGVVRAKF+SNLPPESMGRKVRVFMYPSSI
Sbjct: 61 KTKSSETRYRCIWGKITRPHGNSGVVRAKFKSNLPPESMGRKVRVFMYPSSI 112
>ref|XP_468159.1| putative ribosomal protein L35A [Oryza sativa (japonica
cultivar-group)]
ref|XP_507015.1| PREDICTED OJ1715_H01.42 gene product [Oryza sativa (japonica
cultivar-group)]
dbj|BAD19312.1| putative ribosomal protein L35A [Oryza sativa (japonica
cultivar-group)]
dbj|BAD19202.1| putative ribosomal protein L35A [Oryza sativa (japonica
cultivar-group)]
Length = 112
Score = 219 bits (558), Expect = 7e-56
Identities = 103/112 (91%), Positives = 108/112 (96%)
Frame = +1
Query: 97 MVKGRTGQRVRLYVRGTVLGYKRSKSNQYETTSLVQIEGVNTKEDVAWYCGKRMAYIYKA 276
MVKGRTGQRVRLYVRGT+LGYKRSKSNQYE TSLVQIEGVNTKE+VAWYCGKRMAY+YKA
Sbjct: 1 MVKGRTGQRVRLYVRGTILGYKRSKSNQYENTSLVQIEGVNTKEEVAWYCGKRMAYVYKA 60
Query: 277 KTKSSGTHYRCIWGKVARPHGNSGVVRAKFRSNLPPESMGRKVRVFMYPSSI 432
KTKS GT+YRCIWGKV RPHGNSGVVRAKF+SNLPP SMGRKVRVFMYPSSI
Sbjct: 61 KTKSGGTNYRCIWGKVTRPHGNSGVVRAKFKSNLPPASMGRKVRVFMYPSSI 112
>gb|AAK25760.1| ribosomal protein L33 [Castanea sativa]
Length = 112
Score = 203 bits (517), Expect = 4e-51
Identities = 93/112 (83%), Positives = 103/112 (91%)
Frame = +1
Query: 97 MVKGRTGQRVRLYVRGTVLGYKRSKSNQYETTSLVQIEGVNTKEDVAWYCGKRMAYIYKA 276
MVKGR G+RVRLYVRGT+LGYKRSKSNQY TSL+QIEGVNTKE+V WY GKRMAY+YKA
Sbjct: 1 MVKGRQGERVRLYVRGTILGYKRSKSNQYPNTSLIQIEGVNTKEEVGWYAGKRMAYVYKA 60
Query: 277 KTKSSGTHYRCIWGKVARPHGNSGVVRAKFRSNLPPESMGRKVRVFMYPSSI 432
K K G+HYRCIWGKVARPHGNSGVVRAKF+SNLPP+SMG +VRVFMYPS+I
Sbjct: 61 KVKKDGSHYRCIWGKVARPHGNSGVVRAKFKSNLPPKSMGARVRVFMYPSNI 112
>ref|NP_177567.1| structural constituent of ribosome [Arabidopsis thaliana]
gb|AAL34282.1| putative ribosomal protein [Arabidopsis thaliana]
gb|AAK44135.1| putative ribosomal protein [Arabidopsis thaliana]
gb|AAM63166.1| putative ribosomal protein [Arabidopsis thaliana]
gb|AAG52401.1| putative ribosomal protein; 23489-24540 [Arabidopsis thaliana]
Length = 112
Score = 200 bits (509), Expect = 4e-50
Identities = 94/112 (83%), Positives = 103/112 (91%)
Frame = +1
Query: 97 MVKGRTGQRVRLYVRGTVLGYKRSKSNQYETTSLVQIEGVNTKEDVAWYCGKRMAYIYKA 276
MVKGR G+RVRLYVRGT+LGYKRSKSNQY TSLVQIEGVNT+E+V WY GKRMAYIYKA
Sbjct: 1 MVKGRQGERVRLYVRGTILGYKRSKSNQYPNTSLVQIEGVNTQEEVNWYKGKRMAYIYKA 60
Query: 277 KTKSSGTHYRCIWGKVARPHGNSGVVRAKFRSNLPPESMGRKVRVFMYPSSI 432
KTK +G+HYRCIWGKV RPHGNSGVVRAKF SNLPP+SMG +VRVFMYPS+I
Sbjct: 61 KTKKNGSHYRCIWGKVTRPHGNSGVVRAKFTSNLPPKSMGSRVRVFMYPSNI 112
>ref|NP_172188.1| structural constituent of ribosome [Arabidopsis thaliana]
gb|AAM63844.1| ribosomal protein, putative [Arabidopsis thaliana]
gb|AAF82213.1| Strong similarity to a ribosomal protein from Arabidopsis thaliana
gb|AL161667. It contains a ribosomal protein L35Ae
domain PF|01247
gb|AAO42960.1| At1g07070 [Arabidopsis thaliana]
dbj|BAC43636.1| unknown protein [Arabidopsis thaliana]
Length = 112
Score = 200 bits (509), Expect = 4e-50
Identities = 93/112 (83%), Positives = 103/112 (91%)
Frame = +1
Query: 97 MVKGRTGQRVRLYVRGTVLGYKRSKSNQYETTSLVQIEGVNTKEDVAWYCGKRMAYIYKA 276
MVKGR G+RVRLYVRGT+LGYKRSKSNQY TSLVQ+EGVNT E+V+WY GKRMAYIYKA
Sbjct: 1 MVKGRQGERVRLYVRGTILGYKRSKSNQYPNTSLVQVEGVNTTEEVSWYKGKRMAYIYKA 60
Query: 277 KTKSSGTHYRCIWGKVARPHGNSGVVRAKFRSNLPPESMGRKVRVFMYPSSI 432
KTK +G+HYRCIWGKV RPHGNSGVVRAKF SNLPP+SMG +VRVFMYPS+I
Sbjct: 61 KTKKNGSHYRCIWGKVTRPHGNSGVVRAKFTSNLPPKSMGSRVRVFMYPSNI 112
>ref|XP_475896.1| putative ribosomal protein L35A [Oryza sativa (japonica
cultivar-group)]
ref|XP_475888.1| putative ribosomal protein L35A [Oryza sativa (japonica
cultivar-group)]
gb|AAT58712.1| putative ribosomal protein L35A [Oryza sativa (japonica
cultivar-group)]
gb|AAT58704.1| putative ribosomal protein L35A [Oryza sativa (japonica
cultivar-group)]
Length = 111
Score = 198 bits (503), Expect = 2e-49
Identities = 93/111 (83%), Positives = 102/111 (91%)
Frame = +1
Query: 100 VKGRTGQRVRLYVRGTVLGYKRSKSNQYETTSLVQIEGVNTKEDVAWYCGKRMAYIYKAK 279
+KGR GQRVRLYVRGT+LGYKRSKSNQYE TSL+QIEGVNTKE+V WY GKR+AY+YKAK
Sbjct: 1 MKGRQGQRVRLYVRGTILGYKRSKSNQYENTSLLQIEGVNTKEEVGWYAGKRIAYVYKAK 60
Query: 280 TKSSGTHYRCIWGKVARPHGNSGVVRAKFRSNLPPESMGRKVRVFMYPSSI 432
TKS+ + RCIWGKV RPHGNSGVVRAKFRSNLPP SMG+KVRVFMYPSSI
Sbjct: 61 TKSNDSTIRCIWGKVTRPHGNSGVVRAKFRSNLPPTSMGKKVRVFMYPSSI 111
>ref|NP_191134.1| structural constituent of ribosome [Arabidopsis thaliana]
emb|CAB81600.1| ribosomal protein [Arabidopsis thaliana]
gb|AAL38628.1| AT3g55750/F1I16_160 [Arabidopsis thaliana]
gb|AAK96584.1| AT3g55750/F1I16_160 [Arabidopsis thaliana]
gb|AAM65184.1| ribosomal protein L35a-like [Arabidopsis thaliana]
sp|P51422|RL35A_ARATH 60S ribosomal protein L35a
Length = 111
Score = 195 bits (496), Expect = 1e-48
Identities = 91/111 (81%), Positives = 102/111 (91%)
Frame = +1
Query: 100 VKGRTGQRVRLYVRGTVLGYKRSKSNQYETTSLVQIEGVNTKEDVAWYCGKRMAYIYKAK 279
+KGR G+RVRLYVRGTVLGYKRSKSNQY TSLVQIEGVNT+E+V WY GKR+AYIYKAK
Sbjct: 1 MKGRQGERVRLYVRGTVLGYKRSKSNQYPNTSLVQIEGVNTQEEVNWYKGKRLAYIYKAK 60
Query: 280 TKSSGTHYRCIWGKVARPHGNSGVVRAKFRSNLPPESMGRKVRVFMYPSSI 432
TK +G+HYRCIWGKV RPHGNSGVVR+KF SNLPP+SMG +VRVFMYPS+I
Sbjct: 61 TKKNGSHYRCIWGKVTRPHGNSGVVRSKFTSNLPPKSMGARVRVFMYPSNI 111
>ref|NP_174951.1| structural constituent of ribosome [Arabidopsis thaliana]
gb|AAP21325.1| At1g41880 [Arabidopsis thaliana]
gb|AAM61069.1| ribosomal protein [Arabidopsis thaliana]
gb|AAK48976.1| Putative ribosomal protein [Arabidopsis thaliana]
gb|AAF99832.1| Putative ribosomal protein [Arabidopsis thaliana]
Length = 111
Score = 195 bits (495), Expect = 1e-48
Identities = 90/111 (81%), Positives = 102/111 (91%)
Frame = +1
Query: 100 VKGRTGQRVRLYVRGTVLGYKRSKSNQYETTSLVQIEGVNTKEDVAWYCGKRMAYIYKAK 279
+KGR G+RVRLYVRGTVLGYKRSKSNQY TSL+QIEGVNT+E+V WY GKR+AYIYKAK
Sbjct: 1 MKGRQGERVRLYVRGTVLGYKRSKSNQYPNTSLIQIEGVNTQEEVNWYKGKRLAYIYKAK 60
Query: 280 TKSSGTHYRCIWGKVARPHGNSGVVRAKFRSNLPPESMGRKVRVFMYPSSI 432
TK +G+HYRCIWGKV RPHGNSGVVR+KF SNLPP+SMG +VRVFMYPS+I
Sbjct: 61 TKKNGSHYRCIWGKVTRPHGNSGVVRSKFTSNLPPKSMGARVRVFMYPSNI 111
>gb|AAV64217.1| rpl35A [Zea mays]
Length = 139
Score = 182 bits (463), Expect = 8e-45
Identities = 93/119 (78%), Positives = 95/119 (79%), Gaps = 20/119 (16%)
Frame = +1
Query: 97 MVKGRTGQRVRLYVRGTVLGYKR--------------------SKSNQYETTSLVQIEGV 216
MVKGRTGQRVRLYVRGT+LGYKR SKSNQYETTSLVQIEGV
Sbjct: 1 MVKGRTGQRVRLYVRGTILGYKRRAHCLRFFPRPCYLDLAIPRSKSNQYETTSLVQIEGV 60
Query: 217 NTKEDVAWYCGKRMAYIYKAKTKSSGTHYRCIWGKVARPHGNSGVVRAKFRSNLPPESM 393
NTKEDVAWY GKRMAYIYKAKTKSS T YRCIWGKV RPHGNSGVVRAKF+SNLPPESM
Sbjct: 61 NTKEDVAWYAGKRMAYIYKAKTKSSETRYRCIWGKVTRPHGNSGVVRAKFKSNLPPESM 119
>emb|CAI75801.1| 60S ribosomal protein l35a, putative [Theileria annulata]
ref|XP_955277.1| 60S ribosomal protein L35a [Theileria annulata strain Ankara]
Length = 117
Score = 146 bits (368), Expect = 8e-34
Identities = 64/103 (62%), Positives = 85/103 (82%)
Frame = +1
Query: 124 VRLYVRGTVLGYKRSKSNQYETTSLVQIEGVNTKEDVAWYCGKRMAYIYKAKTKSSGTHY 303
VRLY R LGYKRSK NQ + +SL+++EGVNT+E+ ++Y GKR+AY+YKAKT +G +
Sbjct: 15 VRLYTRAVFLGYKRSKVNQDQKSSLLRLEGVNTREETSFYLGKRVAYVYKAKTLKNGKKH 74
Query: 304 RCIWGKVARPHGNSGVVRAKFRSNLPPESMGRKVRVFMYPSSI 432
R +WGKV RPHGN GVVRAKF+ NLPP++MG +VRVF+YPS++
Sbjct: 75 RVVWGKVTRPHGNGGVVRAKFKKNLPPKAMGHRVRVFLYPSNV 117
>ref|XP_763631.1| 60S ribosomal protein L35a [Theileria parva strain Muguga]
gb|EAN31348.1| 60S ribosomal protein L35a, putative [Theileria parva]
Length = 117
Score = 143 bits (360), Expect = 7e-33
Identities = 63/102 (61%), Positives = 83/102 (81%)
Frame = +1
Query: 124 VRLYVRGTVLGYKRSKSNQYETTSLVQIEGVNTKEDVAWYCGKRMAYIYKAKTKSSGTHY 303
VRLY R LGYKRSK NQ + +SL+++EGVNT+E+ ++Y GKR+AY+YKAK +G +
Sbjct: 15 VRLYTRAVFLGYKRSKVNQDQKSSLLRLEGVNTREETSFYLGKRVAYVYKAKALKNGKKH 74
Query: 304 RCIWGKVARPHGNSGVVRAKFRSNLPPESMGRKVRVFMYPSS 429
R +WGKV RPHGN GVVRAKF+ NLPP++MG +VRVF+YPS+
Sbjct: 75 RVVWGKVTRPHGNGGVVRAKFKKNLPPKAMGHRVRVFLYPSN 116
>gb|AAY43422.1| ribosomal protein L35 [Phytophthora infestans]
Length = 111
Score = 132 bits (331), Expect = 2e-29
Identities = 60/107 (56%), Positives = 80/107 (74%)
Frame = +1
Query: 112 TGQRVRLYVRGTVLGYKRSKSNQYETTSLVQIEGVNTKEDVAWYCGKRMAYIYKAKTKSS 291
+GQ RLYV+G LGYKR NQY T+LV+I+G+ K+DV +Y GK++AYIYK K+ +
Sbjct: 5 SGQPTRLYVKGVFLGYKRGLRNQYSHTALVKIQGLTDKKDVDFYLGKKIAYIYKGKSLKN 64
Query: 292 GTHYRCIWGKVARPHGNSGVVRAKFRSNLPPESMGRKVRVFMYPSSI 432
GT +R IWGKV R HG++GVVRAKF NLP E++ + VRV +YPS +
Sbjct: 65 GTQFRVIWGKVMRAHGSNGVVRAKFAKNLPAEAISKSVRVMLYPSRV 111
>ref|NP_701296.1| Ribosomal protein, putative [Plasmodium falciparum 3D7]
gb|AAN36020.1| Ribosomal protein, putative [Plasmodium falciparum 3D7]
Length = 140
Score = 127 bits (318), Expect = 5e-28
Identities = 55/105 (52%), Positives = 77/105 (73%)
Frame = +1
Query: 118 QRVRLYVRGTVLGYKRSKSNQYETTSLVQIEGVNTKEDVAWYCGKRMAYIYKAKTKSSGT 297
Q VRLY +G +LGYKRS+ NQ +L+ I+ VNTK+ +Y GKR+AY+Y+ G
Sbjct: 36 QAVRLYEKGVILGYKRSQRNQDPNFTLISIKNVNTKKHAQFYVGKRVAYVYRTTKHHDGV 95
Query: 298 HYRCIWGKVARPHGNSGVVRAKFRSNLPPESMGRKVRVFMYPSSI 432
+CIWGKV R HGNSGV+RAKF++++PP++ G +VR+ MYPS+I
Sbjct: 96 KIKCIWGKVCRTHGNSGVIRAKFKTHIPPKAFGDRVRILMYPSNI 140
>ref|XP_628426.1| 60S ribosomal protein L35A , [Cryptosporidium parvum Iowa II]
ref|XP_665886.1| 60S ribosomal protein L35a (RPL35aC) [Cryptosporidium hominis
TU502]
gb|EAK90274.1| 60S ribosomal protein L35A , transcript identified by EST
[Cryptosporidium parvum]
gb|EAL35658.1| 60S ribosomal protein L35a (RPL35aC) [Cryptosporidium hominis]
Length = 120
Score = 125 bits (315), Expect = 1e-27
Identities = 63/108 (58%), Positives = 77/108 (71%)
Frame = +1
Query: 109 RTGQRVRLYVRGTVLGYKRSKSNQYETTSLVQIEGVNTKEDVAWYCGKRMAYIYKAKTKS 288
+T + VRLY + V GYKRSK NQ SL++IEGV TKED +Y GKR AYIYKAKT
Sbjct: 13 KTTEPVRLYSKAIVTGYKRSKVNQTPNVSLLKIEGVKTKEDAKFYLGKRCAYIYKAKTIK 72
Query: 289 SGTHYRCIWGKVARPHGNSGVVRAKFRSNLPPESMGRKVRVFMYPSSI 432
+GT +R I G + R +GNSG V AKFR LPP S G +VRVF++PS+I
Sbjct: 73 NGTKFRVIQGLIRRSYGNSGAVCAKFRKALPPSSFGGRVRVFLFPSNI 120
>gb|AAS51346.1| ACR120Cp [Ashbya gossypii ATCC 10895]
ref|NP_983522.1| ACR120Cp [Eremothecium gossypii]
Length = 107
Score = 124 bits (311), Expect = 3e-27
Identities = 58/102 (56%), Positives = 74/102 (72%)
Frame = +1
Query: 127 RLYVRGTVLGYKRSKSNQYETTSLVQIEGVNTKEDVAWYCGKRMAYIYKAKTKSSGTHYR 306
RLYV+G L Y+RSKS SL++IEGV ED +Y GKR+AY+Y+ + G+ R
Sbjct: 6 RLYVKGKHLSYQRSKSVNNPNVSLIKIEGVTNPEDAKFYLGKRVAYVYRCSKEVRGSKIR 65
Query: 307 CIWGKVARPHGNSGVVRAKFRSNLPPESMGRKVRVFMYPSSI 432
IWGK+AR HGNSGVVRAKFRSNLP ++ G VR+F+YPS+I
Sbjct: 66 VIWGKIARTHGNSGVVRAKFRSNLPAKTFGASVRIFLYPSNI 107
>gb|AAK92169.1| ribosomal protein L35A [Spodoptera frugiperda]
Length = 159
Score = 121 bits (304), Expect = 2e-26
Identities = 62/134 (46%), Positives = 83/134 (61%), Gaps = 8/134 (5%)
Frame = +1
Query: 55 PASPDSRGRSCSVEMVKGRTGQRVRLYVRGTVLGYKRSKSNQYETTSLVQIEGVNTKEDV 234
PA+P ++ K R G RLY + GYKR NQ+E T+L++IEG ++ED
Sbjct: 29 PAAPAEPPKAVRKVSSKPRHG---RLYAKAVFTGYKRGLRNQHENTALLKIEGAKSREDA 85
Query: 235 AWYCGKRMAYIYKAKTKS--------SGTHYRCIWGKVARPHGNSGVVRAKFRSNLPPES 390
+Y GKR Y+Y+AK ++ T R IWGKV RPHGNSG VRA+FRSNLP ++
Sbjct: 86 DFYAGKRCVYVYRAKKRTPIAGGPRGKKTKLRAIWGKVTRPHGNSGGVRARFRSNLPAQA 145
Query: 391 MGRKVRVFMYPSSI 432
MG ++RV +YPS I
Sbjct: 146 MGHRIRVMLYPSRI 159
>ref|XP_760773.1| hypothetical protein UM04626.1 [Ustilago maydis 521]
gb|EAK85483.1| hypothetical protein UM04626.1 [Ustilago maydis 521]
Length = 234
Score = 121 bits (304), Expect = 2e-26
Identities = 55/117 (47%), Positives = 80/117 (68%)
Frame = +1
Query: 82 SCSVEMVKGRTGQRVRLYVRGTVLGYKRSKSNQYETTSLVQIEGVNTKEDVAWYCGKRMA 261
+C + + T RLYV+G ++G+KRS+ TSL++IEGV ++ +Y GKR+A
Sbjct: 118 NCFIRIQHSSTLSTSRLYVKGRIMGHKRSQRVAKCHTSLIKIEGVEKTDEAKFYLGKRVA 177
Query: 262 YIYKAKTKSSGTHYRCIWGKVARPHGNSGVVRAKFRSNLPPESMGRKVRVFMYPSSI 432
Y+YKA + G+ R IWG++ RPHGNSGVVRAKF N+PP++ +VR+ +YPSSI
Sbjct: 178 YVYKATKEVRGSKIRVIWGRITRPHGNSGVVRAKFAHNIPPQAFAARVRIMLYPSSI 234
>gb|AAY66948.1| ribosomal protein L35a [Ixodes scapularis]
Length = 146
Score = 120 bits (301), Expect = 5e-26
Identities = 61/140 (43%), Positives = 87/140 (62%), Gaps = 7/140 (5%)
Frame = +1
Query: 34 SEAIVHVPASPDSRGRSCSVEMVKGRTGQRVRLYVRGTVLGYKRSKSNQYETTSLVQIEG 213
++A P + + + + + +T RLY + +GY+R NQ+E TSL++IEG
Sbjct: 7 AKAAPEAPKAAEKKVAAVEAKDSGRKTRTPKRLYCKAVFVGYRRGLRNQHEHTSLLKIEG 66
Query: 214 VNTKEDVAWYCGKRMAYIYKAKTKSSGT----HY---RCIWGKVARPHGNSGVVRAKFRS 372
VN++ + +Y GKR ++Y AK K+ HY R IWGKV RPHGNSGVVRAKFR
Sbjct: 67 VNSRRETGFYLGKRAVFVYTAKNKTRVPGHKHHYSKLRAIWGKVTRPHGNSGVVRAKFRR 126
Query: 373 NLPPESMGRKVRVFMYPSSI 432
N+P +MGR+VR+ +YPS I
Sbjct: 127 NMPAVAMGRRVRIMLYPSRI 146
>ref|XP_739385.1| Ribosomal protein [Plasmodium chabaudi chabaudi]
emb|CAH79417.1| Ribosomal protein, putative [Plasmodium chabaudi]
Length = 144
Score = 120 bits (301), Expect = 5e-26
Identities = 52/102 (50%), Positives = 73/102 (71%)
Frame = +1
Query: 127 RLYVRGTVLGYKRSKSNQYETTSLVQIEGVNTKEDVAWYCGKRMAYIYKAKTKSSGTHYR 306
RLY +G +LGYKRS+ NQ +L+ I VNTK+ +Y GK++AY+Y+ G+ +
Sbjct: 43 RLYEKGVILGYKRSQRNQDPNFTLLSIRNVNTKKHAQFYVGKKVAYVYRTTKHHDGSKIK 102
Query: 307 CIWGKVARPHGNSGVVRAKFRSNLPPESMGRKVRVFMYPSSI 432
CIWGKV R HGNSGVVRA+F S++PP + G +VR+ +YPS+I
Sbjct: 103 CIWGKVCRTHGNSGVVRARFTSHIPPRAFGNRVRILLYPSNI 144
>ref|XP_726239.1| ribosomal protein L35Ae [Plasmodium yoelii yoelii str. 17XNL]
gb|EAA17804.1| Ribosomal protein L35Ae, putative [Plasmodium yoelii yoelii]
Length = 143
Score = 120 bits (300), Expect = 6e-26
Identities = 54/122 (44%), Positives = 80/122 (65%), Gaps = 4/122 (3%)
Frame = +1
Query: 79 RSCSVEMVKGRTGQRV----RLYVRGTVLGYKRSKSNQYETTSLVQIEGVNTKEDVAWYC 246
+S ++K + G + RLY +G +LGYKRS+ NQ +L+ I VNT++ Y
Sbjct: 22 KSIKKVLIKNKKGNKKMKAPRLYEKGVILGYKRSQRNQDPNFTLLSIRNVNTRKHAQLYV 81
Query: 247 GKRMAYIYKAKTKSSGTHYRCIWGKVARPHGNSGVVRAKFRSNLPPESMGRKVRVFMYPS 426
GKR+AY+Y+ G +CIWGKV R HGNSGVVRA+F +++PP++ G +VR+ +YPS
Sbjct: 82 GKRVAYVYRTNKHHDGVKIKCIWGKVCRTHGNSGVVRARFATHIPPQAFGNRVRILLYPS 141
Query: 427 SI 432
+I
Sbjct: 142 NI 143
>gb|AAW44222.1| 60s ribosomal protein l33-b, putative [Cryptococcus neoformans var.
neoformans JEC21]
ref|XP_571529.1| 60s ribosomal protein l33-b [Cryptococcus neoformans var.
neoformans JEC21]
Length = 178
Score = 120 bits (300), Expect = 6e-26
Identities = 52/102 (50%), Positives = 75/102 (73%)
Frame = +1
Query: 127 RLYVRGTVLGYKRSKSNQYETTSLVQIEGVNTKEDVAWYCGKRMAYIYKAKTKSSGTHYR 306
RLY++G +LG+KR K N SL+QIEGV+ KE Y GKR+AY+YKAK + +G+ R
Sbjct: 77 RLYIKGRILGHKRGKRNSRPNQSLLQIEGVDNKEAAGHYLGKRVAYVYKAKREINGSRVR 136
Query: 307 CIWGKVARPHGNSGVVRAKFRSNLPPESMGRKVRVFMYPSSI 432
IWG+++R HGNSG V++KFR+NLP ++ G R+ ++PS+I
Sbjct: 137 VIWGRISRSHGNSGAVKSKFRTNLPAKTFGASCRIMLFPSNI 178
>gb|EAL19965.1| hypothetical protein CNBF2920 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 178
Score = 120 bits (300), Expect = 6e-26
Identities = 52/102 (50%), Positives = 75/102 (73%)
Frame = +1
Query: 127 RLYVRGTVLGYKRSKSNQYETTSLVQIEGVNTKEDVAWYCGKRMAYIYKAKTKSSGTHYR 306
RLY++G +LG+KR K N SL+QIEGV+ KE Y GKR+AY+YKAK + +G+ R
Sbjct: 77 RLYIKGRILGHKRGKRNSRPNQSLLQIEGVDNKEAAGHYLGKRVAYVYKAKREINGSRVR 136
Query: 307 CIWGKVARPHGNSGVVRAKFRSNLPPESMGRKVRVFMYPSSI 432
IWG+++R HGNSG V++KFR+NLP ++ G R+ ++PS+I
Sbjct: 137 VIWGRISRSHGNSGAVKSKFRTNLPAKTFGASCRIMLFPSNI 178
>ref|XP_453392.1| unnamed protein product [Kluyveromyces lactis]
emb|CAH00488.1| unnamed protein product [Kluyveromyces lactis NRRL Y-1140]
Length = 107
Score = 119 bits (298), Expect = 1e-25
Identities = 57/102 (55%), Positives = 72/102 (70%)
Frame = +1
Query: 127 RLYVRGTVLGYKRSKSNQYETTSLVQIEGVNTKEDVAWYCGKRMAYIYKAKTKSSGTHYR 306
RLYV+G L Y+RSKS SLV+IEGV ED +Y GKR+AY+Y+ + G+ R
Sbjct: 6 RLYVKGKHLSYQRSKSVNNPNVSLVKIEGVANPEDAKFYLGKRVAYVYRCSKEVRGSKIR 65
Query: 307 CIWGKVARPHGNSGVVRAKFRSNLPPESMGRKVRVFMYPSSI 432
IWGK+ R HGNSGVVRA FRSNLP ++ G VR+F+YPS+I
Sbjct: 66 VIWGKINRTHGNSGVVRATFRSNLPAKTFGASVRIFLYPSNI 107
>emb|CAG62430.1| unnamed protein product [Candida glabrata CBS138]
ref|XP_449454.1| hypothetical protein CAGL0M02497g [Candida glabrata CBS138]
Length = 107
Score = 119 bits (298), Expect = 1e-25
Identities = 55/102 (53%), Positives = 74/102 (72%)
Frame = +1
Query: 127 RLYVRGTVLGYKRSKSNQYETTSLVQIEGVNTKEDVAWYCGKRMAYIYKAKTKSSGTHYR 306
RLYV+G L Y+RSKS SL+QIEGV ++ +Y GKR+AY+Y+A + G+ R
Sbjct: 6 RLYVKGKHLSYQRSKSVNNPNVSLLQIEGVANPQEAQFYLGKRVAYVYRASKEVRGSKIR 65
Query: 307 CIWGKVARPHGNSGVVRAKFRSNLPPESMGRKVRVFMYPSSI 432
+WGK+ R HGNSGVVRAKFR+NLP ++ G VR+F+YPS+I
Sbjct: 66 VMWGKITRTHGNSGVVRAKFRNNLPAKTFGASVRIFLYPSNI 107
>ref|XP_679452.1| Ribosomal protein [Plasmodium berghei strain ANKA]
ref|XP_672762.1| Ribosomal protein [Plasmodium berghei strain ANKA]
emb|CAH98432.1| Ribosomal protein, putative [Plasmodium berghei]
emb|CAI02332.1| Ribosomal protein, putative [Plasmodium berghei]
Length = 143
Score = 119 bits (297), Expect = 1e-25
Identities = 51/102 (50%), Positives = 72/102 (70%)
Frame = +1
Query: 127 RLYVRGTVLGYKRSKSNQYETTSLVQIEGVNTKEDVAWYCGKRMAYIYKAKTKSSGTHYR 306
RLY +G +LGYKRS+ NQ +L+ I VNT++ Y GKR+AY+Y+ G +
Sbjct: 42 RLYEKGVILGYKRSQRNQDPNFTLLSIRNVNTRKHAQLYVGKRVAYVYRTNKHHDGVKIK 101
Query: 307 CIWGKVARPHGNSGVVRAKFRSNLPPESMGRKVRVFMYPSSI 432
CIWGKV R HGNSGVVRA+F +++PP++ G +VR+ +YPS+I
Sbjct: 102 CIWGKVCRTHGNSGVVRARFATHIPPQAFGNRVRILLYPSNI 143
>emb|CAJ17422.1| ribosomal protein L35Ae [Sphaerius sp. APV-2005]
Length = 145
Score = 118 bits (296), Expect = 2e-25
Identities = 55/110 (50%), Positives = 73/110 (66%), Gaps = 8/110 (7%)
Frame = +1
Query: 127 RLYVRGTVLGYKRSKSNQYETTSLVQIEGVNTKEDVAWYCGKRMAYIYKAKTK------- 285
RLY + GYKR NQ+E+T+L++IEG + KE+ WY GK+ Y+YKAK K
Sbjct: 36 RLYAKAIFTGYKRGLRNQHESTALLRIEGCDKKEETLWYVGKKCVYVYKAKNKTCIPGKP 95
Query: 286 -SSGTHYRCIWGKVARPHGNSGVVRAKFRSNLPPESMGRKVRVFMYPSSI 432
S + R IWGKV RPHG SG VRAKF+ NLP ++MG ++R+ +YPS I
Sbjct: 96 KSKKSKVRAIWGKVTRPHGCSGAVRAKFKRNLPAKAMGHRIRIMLYPSRI 145
>ref|XP_660584.1| hypothetical protein AN2980.2 [Aspergillus nidulans FGSC A4]
gb|EAA63551.1| hypothetical protein AN2980.2 [Aspergillus nidulans FGSC A4]
Length = 109
Score = 118 bits (296), Expect = 2e-25
Identities = 56/102 (54%), Positives = 75/102 (73%)
Frame = +1
Query: 127 RLYVRGTVLGYKRSKSNQYETTSLVQIEGVNTKEDVAWYCGKRMAYIYKAKTKSSGTHYR 306
RLYV+G L Y+RSK TSL++I+GV+ E +Y GK++A++Y+AK + G++ R
Sbjct: 8 RLYVKGRHLSYQRSKRAVNPNTSLIKIDGVDNTEAANFYLGKKVAFVYRAKREVRGSNIR 67
Query: 307 CIWGKVARPHGNSGVVRAKFRSNLPPESMGRKVRVFMYPSSI 432
IWGKV RPHGNSGVVRA+FR NLP +S G VRV +YPS+I
Sbjct: 68 VIWGKVTRPHGNSGVVRAQFRHNLPAKSFGATVRVMLYPSNI 109
>ref|NP_015182.1| N-terminally acetylated ribosomal protein L37 of the large (60S)
ribosomal subunit, nearly identical to Rpl33Bp and has
similarity to rat L35a; rpl33a null mutant exhibits slow
growth while rpl33a rpl33b double null mutant is
inviable; Rpl33ap [Saccharomyces cerevisiae]
emb|CAA97847.1| RPL37A [Saccharomyces cerevisiae]
emb|CAA41035.1| ribosomal protein L37a [Saccharomyces cerevisiae]
sp|P05744|RL33A_YEAST 60S ribosomal protein L33-A (L37A) (YL37) (RP47)
gb|AAB68218.1| Lpi4p
Length = 107
Score = 118 bits (295), Expect = 2e-25
Identities = 55/102 (53%), Positives = 73/102 (71%)
Frame = +1
Query: 127 RLYVRGTVLGYKRSKSNQYETTSLVQIEGVNTKEDVAWYCGKRMAYIYKAKTKSSGTHYR 306
RLYV+G L Y+RSK SL++IEGV T +D +Y GKR+AY+Y+A + G+ R
Sbjct: 6 RLYVKGKHLSYQRSKRVNNPNVSLIKIEGVATPQDAQFYLGKRIAYVYRASKEVRGSKIR 65
Query: 307 CIWGKVARPHGNSGVVRAKFRSNLPPESMGRKVRVFMYPSSI 432
+WGKV R HGNSGVVRA FR+NLP ++ G VR+F+YPS+I
Sbjct: 66 VMWGKVTRTHGNSGVVRATFRNNLPAKTFGASVRIFLYPSNI 107
>gb|AAA82422.1| Ribosomal protein, large subunit protein 33 [Caenorhabditis
elegans]
ref|NP_495468.1| Ribosomal Protein, Large subunit family member (rpl-33)
[Caenorhabditis elegans]
sp|P49180|RL35A_CAEEL 60S ribosomal protein L35a
Length = 124
Score = 117 bits (294), Expect = 3e-25
Identities = 56/108 (51%), Positives = 75/108 (69%), Gaps = 6/108 (5%)
Frame = +1
Query: 127 RLYVRGTVLGYKRSKSNQYETTSLVQIEGVNTKEDVAWYCGKRMAYIYKA--KTKSSG-- 294
RLYV+ G+KR Q E TSL+++EGV KED +Y GKR+ Y+YKA KT +G
Sbjct: 17 RLYVKAIFTGFKRGLRTQSEHTSLLKLEGVFNKEDAGFYAGKRVVYLYKAHNKTLKTGHT 76
Query: 295 --THYRCIWGKVARPHGNSGVVRAKFRSNLPPESMGRKVRVFMYPSSI 432
T R IWGK+ RPHGN+G VRAKF N+PP ++G+++RV +YPS+I
Sbjct: 77 VATRTRAIWGKITRPHGNAGAVRAKFHHNIPPSALGKRIRVLLYPSNI 124
>emb|CAE67541.1| Hypothetical protein CBG13066 [Caenorhabditis briggsae]
Length = 123
Score = 117 bits (293), Expect = 4e-25
Identities = 56/108 (51%), Positives = 76/108 (70%), Gaps = 6/108 (5%)
Frame = +1
Query: 127 RLYVRGTVLGYKRSKSNQYETTSLVQIEGVNTKEDVAWYCGKRMAYIYKA--KTKSSG-- 294
RLYV+ G+KR Q E TSL+++EGV K+D A+Y GKR+ Y+YKA KT +G
Sbjct: 16 RLYVKAIFTGFKRGLRTQSEHTSLLKLEGVFNKDDAAFYTGKRVVYLYKAHNKTLKTGHT 75
Query: 295 --THYRCIWGKVARPHGNSGVVRAKFRSNLPPESMGRKVRVFMYPSSI 432
T R IWGK+ RPHGN+G VRAKF N+PP ++G+++RV +YPS+I
Sbjct: 76 VATRTRAIWGKITRPHGNAGAVRAKFHHNIPPTALGKRIRVLLYPSNI 123
>gb|AAY86759.1| 60S ribosomal protein L33-A [Chaetomium globosum]
Length = 109
Score = 117 bits (293), Expect = 4e-25
Identities = 55/102 (53%), Positives = 72/102 (70%)
Frame = +1
Query: 127 RLYVRGTVLGYKRSKSNQYETTSLVQIEGVNTKEDVAWYCGKRMAYIYKAKTKSSGTHYR 306
RLYV+G L Y+RS+ + TSL++IEGV+ +Y GKR+AY+Y+ + + GT R
Sbjct: 8 RLYVKGRHLSYQRSRHTTHAKTSLIKIEGVDDTAAANFYAGKRVAYVYRGQKEVRGTKIR 67
Query: 307 CIWGKVARPHGNSGVVRAKFRSNLPPESMGRKVRVFMYPSSI 432
IWGKV RPHGNSGVVRAKF + LP S+G VR+ +YPSSI
Sbjct: 68 VIWGKVTRPHGNSGVVRAKFTNPLPSRSLGASVRIMLYPSSI 109
>ref|XP_655059.1| 60S ribosomal protein L35a [Entamoeba histolytica HM-1:IMSS]
ref|XP_654501.1| 60S ribosomal protein L35a [Entamoeba histolytica HM-1:IMSS]
ref|XP_651074.1| 60S ribosomal protein L35a [Entamoeba histolytica HM-1:IMSS]
gb|EAL49671.1| 60S ribosomal protein L35a, putative [Entamoeba histolytica
HM-1:IMSS]
gb|EAL49115.1| 60S ribosomal protein L35a, putative [Entamoeba histolytica
HM-1:IMSS]
gb|EAL45686.1| 60S ribosomal protein L35a, putative [Entamoeba histolytica
HM-1:IMSS]
Length = 108
Score = 117 bits (292), Expect = 5e-25
Identities = 53/106 (50%), Positives = 77/106 (72%), Gaps = 2/106 (1%)
Frame = +1
Query: 121 RVRLYVRGTVLGYKRSKSNQYETTSLVQIEGVNTKEDVAWYCGKRMAYIYKAKTK--SSG 294
+ RL+V +G++R++ NQY +L+QI GVNTKED +Y GKR+AY+YK K S+
Sbjct: 3 KCRLHVNAVFMGFQRAQRNQYPNVALLQISGVNTKEDTPFYIGKRVAYVYKVNVKKGSNK 62
Query: 295 THYRCIWGKVARPHGNSGVVRAKFRSNLPPESMGRKVRVFMYPSSI 432
R I+GK+ PHGN GVV+A+F NLPP++MG+ ++VF+YPS+I
Sbjct: 63 PAIRAIFGKIVAPHGNHGVVKARFLHNLPPKAMGQNLKVFLYPSNI 108
>ref|NP_014877.1| Ribosomal protein L37 of the large (60S) ribosomal subunit, nearly
identical to Rpl33Ap and has similarity to rat L35a;
rpl33b null mutant exhibits normal growth while rpl33a
rpl33b double null mutant is inviable; Rpl33bp
[Saccharomyces cerevisiae]
emb|CAA99454.1| RPL37B [Saccharomyces cerevisiae]
sp|P41056|RL33B_YEAST 60S ribosomal protein L33-B (L37B) (YL37) (RP47)
gb|AAA35006.1| ribosomal protein L37
Length = 107
Score = 116 bits (291), Expect = 7e-25
Identities = 54/102 (52%), Positives = 73/102 (71%)
Frame = +1
Query: 127 RLYVRGTVLGYKRSKSNQYETTSLVQIEGVNTKEDVAWYCGKRMAYIYKAKTKSSGTHYR 306
RLYV+G L Y+RSK SL++IEGV T ++ +Y GKR+AY+Y+A + G+ R
Sbjct: 6 RLYVKGKHLSYQRSKRVNNPNVSLIKIEGVATPQEAQFYLGKRIAYVYRASKEVRGSKIR 65
Query: 307 CIWGKVARPHGNSGVVRAKFRSNLPPESMGRKVRVFMYPSSI 432
+WGKV R HGNSGVVRA FR+NLP ++ G VR+F+YPS+I
Sbjct: 66 VMWGKVTRTHGNSGVVRATFRNNLPAKTFGASVRIFLYPSNI 107
>gb|AAP06414.1| similar to GenBank Accession Number AF400197 ribosomal protein L35A
in Spodoptera frugiperda [Schistosoma japonicum]
Length = 128
Score = 116 bits (290), Expect = 9e-25
Identities = 53/116 (45%), Positives = 78/116 (67%), Gaps = 6/116 (5%)
Frame = +1
Query: 103 KGRTGQRVRLYVRGTVLGYKRSKSNQYETTSLVQIEGVNTKEDVAWYCGKRMAYIYKAKT 282
K R + RLYV+ T GY+R NQ+E+T+L++I+GV ++ +Y GKR Y+Y+A+
Sbjct: 13 KQRLKRPGRLYVKATFTGYRRGLRNQHESTALLRIDGVTERKSTEFYLGKRCVYVYRAEK 72
Query: 283 KS------SGTHYRCIWGKVARPHGNSGVVRAKFRSNLPPESMGRKVRVFMYPSSI 432
K T R IWGK+ RPHGNSG+VRA+F+ NLP +MG+++RV +YPS +
Sbjct: 73 KKVFPRRQKPTKIRVIWGKIMRPHGNSGIVRARFKHNLPASAMGKRIRVMLYPSRV 128
>ref|XP_381454.1| conserved hypothetical protein [Gibberella zeae PH-1]
gb|EAA70587.1| conserved hypothetical protein [Gibberella zeae PH-1]
Length = 109
Score = 116 bits (290), Expect = 9e-25
Identities = 56/102 (54%), Positives = 72/102 (70%)
Frame = +1
Query: 127 RLYVRGTVLGYKRSKSNQYETTSLVQIEGVNTKEDVAWYCGKRMAYIYKAKTKSSGTHYR 306
RLYV+G L Y+RS+ TSL++IEGV+ +Y GK++A++Y+A+ + GT R
Sbjct: 8 RLYVKGRHLSYQRSRHTTRPATSLIKIEGVDDTNAANFYLGKKVAFVYRAQKEIRGTKIR 67
Query: 307 CIWGKVARPHGNSGVVRAKFRSNLPPESMGRKVRVFMYPSSI 432
IWGKV RPHGNSGVVRAKF S LP +S G VRV +YPSSI
Sbjct: 68 VIWGKVTRPHGNSGVVRAKFTSPLPTKSFGASVRVMLYPSSI 109
>ref|XP_623272.1| PREDICTED: similar to ribosomal protein L35A [Apis mellifera]
ref|XP_393102.1| PREDICTED: similar to ribosomal protein L35A [Apis mellifera]
Length = 146
Score = 115 bits (289), Expect = 1e-24
Identities = 55/109 (50%), Positives = 71/109 (65%), Gaps = 7/109 (6%)
Frame = +1
Query: 127 RLYVRGTVLGYKRSKSNQYETTSLVQIEGVNTKEDVAWYCGKRMAYIYKAKTK------- 285
RLY + GYKR NQ+E T+L+++EG K+D +Y GKR Y+YKAK K
Sbjct: 38 RLYAKAIFTGYKRGLRNQHEHTALLKVEGARDKQDSNFYVGKRCVYVYKAKNKTPVPGKK 97
Query: 286 SSGTHYRCIWGKVARPHGNSGVVRAKFRSNLPPESMGRKVRVFMYPSSI 432
S T R IWGKV RPHG SG VRAKF+ NLP ++MG ++R+ +YPS I
Sbjct: 98 SRKTKVRAIWGKVTRPHGTSGSVRAKFKKNLPAKAMGHRIRIMLYPSRI 146
>gb|AAV34847.1| ribosomal protein L35A [Bombyx mori]
Length = 158
Score = 115 bits (289), Expect = 1e-24
Identities = 53/110 (48%), Positives = 71/110 (64%), Gaps = 8/110 (7%)
Frame = +1
Query: 127 RLYVRGTVLGYKRSKSNQYETTSLVQIEGVNTKEDVAWYCGKRMAYIYKAKTKS------ 288
RLY + GYKR NQ+E T+L+++EG + D +Y GK Y+Y+AK ++
Sbjct: 49 RLYAKAVFTGYKRGLRNQHENTALLKVEGAKDRNDAVFYAGKHCVYVYRAKKRTPIPGGP 108
Query: 289 --SGTHYRCIWGKVARPHGNSGVVRAKFRSNLPPESMGRKVRVFMYPSSI 432
T R IWGKV RPHGNSG VRAKF+SNLP ++MG ++RV +YPS I
Sbjct: 109 RGKKTKLRAIWGKVTRPHGNSGSVRAKFKSNLPAQAMGHRIRVMLYPSRI 158
>gb|AAX62468.1| ribosomal protein L35a [Lysiphlebus testaceipes]
Length = 125
Score = 115 bits (289), Expect = 1e-24
Identities = 55/115 (47%), Positives = 76/115 (66%)
Frame = +1
Query: 88 SVEMVKGRTGQRVRLYVRGTVLGYKRSKSNQYETTSLVQIEGVNTKEDVAWYCGKRMAYI 267
+ ++ K RT ++ RLY + GYKR NQ+E T+L+ IEG KED +Y GKR Y+
Sbjct: 13 TTKLSKRRTPRQKRLYAKAIFTGYKRGLRNQHENTALLNIEGCRVKEDADFYVGKRCVYV 72
Query: 268 YKAKTKSSGTHYRCIWGKVARPHGNSGVVRAKFRSNLPPESMGRKVRVFMYPSSI 432
YK++ K R IWGKV R HG SG VRAKF++NLP ++MG ++R+ +YPS I
Sbjct: 73 YKSQQKKDKV--RAIWGKVTRRHGCSGSVRAKFKTNLPAKAMGHRIRIMLYPSRI 125
>gb|AAX48869.1| L35a [Suberites domuncula]
Length = 111
Score = 115 bits (289), Expect = 1e-24
Identities = 55/109 (50%), Positives = 73/109 (66%), Gaps = 6/109 (5%)
Frame = +1
Query: 124 VRLYVRGTVLGYKRSKSNQYETTSLVQIEGVNTKEDVAWYCGKRMAYIY------KAKTK 285
VRLY +G +GYKR + NQ TSL+++EGV + D +Y GKR+AY+Y K + +
Sbjct: 3 VRLYTKGIFVGYKRGQHNQRTHTSLIKLEGVAERNDTEFYLGKRVAYVYRVHKQAKERGE 62
Query: 286 SSGTHYRCIWGKVARPHGNSGVVRAKFRSNLPPESMGRKVRVFMYPSSI 432
+ R IWGKV R HGNSG+VRAKFR NLPP +MG +RV +YPS +
Sbjct: 63 KKPSKRRVIWGKVTRAHGNSGIVRAKFRKNLPPRAMGATLRVMLYPSRV 111
>ref|XP_422734.1| PREDICTED: similar to ribosomal protein L32 [Gallus gallus]
Length = 110
Score = 113 bits (283), Expect = 6e-24
Identities = 55/107 (51%), Positives = 73/107 (68%), Gaps = 5/107 (4%)
Frame = +1
Query: 127 RLYVRGTVLGYKRSKSNQYETTSLVQIEGVNTKEDVAWYCGKRMAYIYKAKTKS-----S 291
RL+ + T GYKR NQ E T+L++IEGV +++ +Y GKR AY+YKAK +
Sbjct: 4 RLWCKATFAGYKRGLRNQREHTALLKIEGVYARQETEFYLGKRCAYVYKAKNNTVTPGGK 63
Query: 292 GTHYRCIWGKVARPHGNSGVVRAKFRSNLPPESMGRKVRVFMYPSSI 432
R IWGKV R HGNSG+VRAKFRSNLP +++G ++RV +YPS I
Sbjct: 64 PNRTRVIWGKVTRAHGNSGMVRAKFRSNLPAKAIGHRIRVMLYPSRI 110
>gb|AAH53771.1| Rpl35a-prov protein [Xenopus laevis]
Length = 110
Score = 113 bits (282), Expect = 7e-24
Identities = 55/107 (51%), Positives = 73/107 (68%), Gaps = 5/107 (4%)
Frame = +1
Query: 127 RLYVRGTVLGYKRSKSNQYETTSLVQIEGVNTKEDVAWYCGKRMAYIYKAKTKS-----S 291
RL+ + T GYKR NQ E T+L++IEGV +++ +Y GKR AY+YKAK +
Sbjct: 4 RLWCKATFAGYKRGLRNQTEHTALLKIEGVYARDETEFYFGKRCAYVYKAKNNTVTPGGK 63
Query: 292 GTHYRCIWGKVARPHGNSGVVRAKFRSNLPPESMGRKVRVFMYPSSI 432
R IWGKV R HGNSG+VRAKFRSNLP +++G ++RV +YPS I
Sbjct: 64 PNRTRVIWGKVTRAHGNSGMVRAKFRSNLPAKAIGHRIRVMLYPSRI 110
>emb|CAA38849.1| ribosomal protein L32 [Xenopus laevis]
sp|P02434|RL35A_XENLA 60S ribosomal protein L35a (L32)
Length = 110
Score = 113 bits (282), Expect = 7e-24
Identities = 55/107 (51%), Positives = 73/107 (68%), Gaps = 5/107 (4%)
Frame = +1
Query: 127 RLYVRGTVLGYKRSKSNQYETTSLVQIEGVNTKEDVAWYCGKRMAYIYKAKTKS-----S 291
RL+ + T GYKR NQ E T+L++IEGV +++ +Y GKR AY+YKAK +
Sbjct: 4 RLWCKATFAGYKRGLRNQREHTALLKIEGVYARDETEFYFGKRCAYVYKAKNNTVTPGGK 63
Query: 292 GTHYRCIWGKVARPHGNSGVVRAKFRSNLPPESMGRKVRVFMYPSSI 432
R IWGKV R HGNSG+VRAKFRSNLP +++G ++RV +YPS I
Sbjct: 64 PNRTRVIWGKVTRAHGNSGMVRAKFRSNLPAKAIGHRIRVMLYPSRI 110
>gb|AAH77673.1| MGC89840 protein [Xenopus tropicalis]
ref|NP_001005134.1| MGC89840 protein [Xenopus tropicalis]
emb|CAJ82856.1| ribosomal protein L35 [Xenopus tropicalis]
Length = 110
Score = 113 bits (282), Expect = 7e-24
Identities = 55/107 (51%), Positives = 73/107 (68%), Gaps = 5/107 (4%)
Frame = +1
Query: 127 RLYVRGTVLGYKRSKSNQYETTSLVQIEGVNTKEDVAWYCGKRMAYIYKAKTKS-----S 291
RL+ + T GYKR NQ E T+L++IEGV +++ +Y GKR AY+YKAK +
Sbjct: 4 RLWSKATFAGYKRGLRNQREHTALLKIEGVYARDETEFYLGKRCAYVYKAKNNTVTPGGK 63
Query: 292 GTHYRCIWGKVARPHGNSGVVRAKFRSNLPPESMGRKVRVFMYPSSI 432
R IWGKV R HGNSG+VRAKFRSNLP +++G ++RV +YPS I
Sbjct: 64 PNRTRVIWGKVTRAHGNSGMVRAKFRSNLPAKAIGHRIRVMLYPSRI 110
>sp|Q9USX4|RL33A_SCHPO 60S ribosomal protein L33-A (L37A)
Length = 108
Score = 112 bits (279), Expect = 2e-23
Identities = 51/102 (50%), Positives = 73/102 (71%)
Frame = +1
Query: 127 RLYVRGTVLGYKRSKSNQYETTSLVQIEGVNTKEDVAWYCGKRMAYIYKAKTKSSGTHYR 306
RLYV+ L ++RSK + TSLV+IEG ++KE+ +Y GKR+ ++YK+ G+ R
Sbjct: 7 RLYVKAKHLSFQRSKHVIHPGTSLVKIEGCDSKEEAQFYLGKRICFVYKSNKPVRGSKIR 66
Query: 307 CIWGKVARPHGNSGVVRAKFRSNLPPESMGRKVRVFMYPSSI 432
IWG V+RPHGNSGVVRA+F NLPP++ G +RV +YPS++
Sbjct: 67 VIWGTVSRPHGNSGVVRARFTHNLPPKTFGASLRVMLYPSNV 108
>dbj|BAB22541.1| unnamed protein product [Mus musculus]
Length = 110
Score = 111 bits (277), Expect = 3e-23
Identities = 54/107 (50%), Positives = 72/107 (67%), Gaps = 5/107 (4%)
Frame = +1
Query: 127 RLYVRGTVLGYKRSKSNQYETTSLVQIEGVNTKEDVAWYCGKRMAYIYKAKTKS-----S 291
RL+ + GYKR NQ E T+L++IEGV +++ +Y GKR AY+YKAK +
Sbjct: 4 RLWCKAIFAGYKRGLRNQRERTALLKIEGVYARDETEFYLGKRCAYVYKAKNNTVTPGGK 63
Query: 292 GTHYRCIWGKVARPHGNSGVVRAKFRSNLPPESMGRKVRVFMYPSSI 432
R IWGKV R HGNSG+VRAKFRSNLP +++G ++RV +YPS I
Sbjct: 64 PNKTRVIWGKVTRAHGNSGMVRAKFRSNLPAKAIGHRIRVMLYPSRI 110
>ref|XP_650327.1| 60S ribosomal protein L35a [Entamoeba histolytica HM-1:IMSS]
gb|EAL44941.1| 60S ribosomal protein L35a, putative [Entamoeba histolytica
HM-1:IMSS]
Length = 96
Score = 111 bits (277), Expect = 3e-23
Identities = 50/96 (52%), Positives = 72/96 (75%), Gaps = 2/96 (2%)
Frame = +1
Query: 151 LGYKRSKSNQYETTSLVQIEGVNTKEDVAWYCGKRMAYIYKAKTK--SSGTHYRCIWGKV 324
+G++R++ NQY +L+QI GVNTKED +Y GKR+AY+YK K S+ R I+GK+
Sbjct: 1 MGFQRAQRNQYPNVALLQISGVNTKEDTPFYIGKRVAYVYKVNVKKGSNKPAIRAIFGKI 60
Query: 325 ARPHGNSGVVRAKFRSNLPPESMGRKVRVFMYPSSI 432
PHGN GVV+A+F NLPP++MG+ ++VF+YPS+I
Sbjct: 61 VAPHGNHGVVKARFLHNLPPKAMGQNLKVFLYPSNI 96
>ref|XP_506094.1| hypothetical protein [Yarrowia lipolytica]
emb|CAG78907.1| unnamed protein product [Yarrowia lipolytica CLIB122]
Length = 110
Score = 111 bits (277), Expect = 3e-23
Identities = 51/102 (50%), Positives = 71/102 (69%)
Frame = +1
Query: 127 RLYVRGTVLGYKRSKSNQYETTSLVQIEGVNTKEDVAWYCGKRMAYIYKAKTKSSGTHYR 306
++YV+G L Y+RSK SLV+IEGV+ E+ +Y GKR+AY+Y+A + GT R
Sbjct: 9 QVYVKGKHLSYQRSKRVVNPNVSLVKIEGVSNPEEAKFYLGKRVAYVYRADKEIRGTKVR 68
Query: 307 CIWGKVARPHGNSGVVRAKFRSNLPPESMGRKVRVFMYPSSI 432
IWGK+ R HGNSG VRA+FR NLP ++ G +R+ +YPS+I
Sbjct: 69 VIWGKIVRTHGNSGAVRARFRHNLPAKTFGSSLRIMLYPSNI 110
>gb|AAK95162.1| ribosomal protein L35a [Ictalurus punctatus]
sp|Q90YT3|RL35A_ICTPU 60S ribosomal protein L35a
Length = 110
Score = 111 bits (277), Expect = 3e-23
Identities = 55/107 (51%), Positives = 75/107 (70%), Gaps = 5/107 (4%)
Frame = +1
Query: 127 RLYVRGTVLGYKRSKSNQYETTSLVQIEGVNTKEDVAWYCGKRMAYIYKAK--TKSSG-- 294
RL+ + GYKR NQ E T+L+++EGV ++ +V +Y GKR AY+YKAK T + G
Sbjct: 4 RLWCKAIFAGYKRGLRNQREHTALLKVEGVYSRNEVDFYLGKRCAYVYKAKKTTVTPGGK 63
Query: 295 -THYRCIWGKVARPHGNSGVVRAKFRSNLPPESMGRKVRVFMYPSSI 432
R IWGKV R HGNSG+VRAKF SNLPP+++G ++RV +YPS +
Sbjct: 64 PNKTRVIWGKVTRAHGNSGMVRAKFTSNLPPKAIGHRIRVMLYPSRV 110
>gb|AAH61557.1| Ribosomal protein L35a [Rattus norvegicus]
gb|AAI00333.1| Ribosomal protein L35a [Mus musculus]
gb|AAH27223.1| Rpl35a protein [Mus musculus]
gb|AAI00600.1| Ribosomal protein L35a [Mus musculus]
dbj|BAB27124.1| unnamed protein product [Mus musculus]
dbj|BAC25818.1| unnamed protein product [Mus musculus]
ref|NP_067087.1| ribosomal protein L35a [Rattus norvegicus]
gb|AAH90255.1| Ribosomal protein L35a [Mus musculus]
ref|XP_930829.1| PREDICTED: similar to ribosomal protein L35a [Mus musculus]
sp|P04646|RL35A_RAT 60S ribosomal protein L35a
sp|O55142|RL35A_MOUSE 60S ribosomal protein L35a
emb|CAA27193.1| unnamed protein product [Rattus norvegicus]
ref|NP_067313.2| ribosomal protein L35a [Mus musculus]
emb|CAA76215.2| ribosomal protein L35a [Mus musculus]
Length = 110
Score = 110 bits (276), Expect = 4e-23
Identities = 54/107 (50%), Positives = 72/107 (67%), Gaps = 5/107 (4%)
Frame = +1
Query: 127 RLYVRGTVLGYKRSKSNQYETTSLVQIEGVNTKEDVAWYCGKRMAYIYKAKTKS-----S 291
RL+ + GYKR NQ E T+L++IEGV +++ +Y GKR AY+YKAK +
Sbjct: 4 RLWCKAIFAGYKRGLRNQREHTALLKIEGVYARDETEFYLGKRCAYVYKAKNNTVTPGGK 63
Query: 292 GTHYRCIWGKVARPHGNSGVVRAKFRSNLPPESMGRKVRVFMYPSSI 432
R IWGKV R HGNSG+VRAKFRSNLP +++G ++RV +YPS I
Sbjct: 64 PNKTRVIWGKVTRAHGNSGMVRAKFRSNLPAKAIGHRIRVMLYPSRI 110
>emb|CAJ17420.1| ribosomal protein L35Ae [Carabus granulatus]
Length = 152
Score = 110 bits (275), Expect = 5e-23
Identities = 54/145 (37%), Positives = 83/145 (57%), Gaps = 8/145 (5%)
Frame = +1
Query: 22 PSLSSEAIVHVPASPDSRGRSCSVEMVKGRTGQRVRLYVRGTVLGYKRSKSNQYETTSLV 201
P + + PA+ + ++ + + RLY + GYKR NQ+E T+L+
Sbjct: 8 PKVEKKTKASAPAAAAAPAGDAKPKLKRRPVKRHGRLYAKAIFTGYKRGLRNQHENTALL 67
Query: 202 QIEGVNTKEDVAWYCGKRMAYIYKAKTKS--------SGTHYRCIWGKVARPHGNSGVVR 357
+I+G + K+D +Y GK+ Y+YKAK K+ + R IWGKV RPHG +G VR
Sbjct: 68 KIDGCSGKDDSWFYVGKKCVYVYKAKNKTCIPGKPKNKKSKVRAIWGKVTRPHGCTGAVR 127
Query: 358 AKFRSNLPPESMGRKVRVFMYPSSI 432
AKF+ NLP ++MG ++RV M+PS +
Sbjct: 128 AKFKRNLPAKAMGHRIRVMMFPSRV 152
>emb|CAG86466.1| unnamed protein product [Debaryomyces hansenii CBS767]
ref|XP_458384.1| hypothetical protein DEHA0C17270g [Debaryomyces hansenii CBS767]
Length = 104
Score = 110 bits (275), Expect = 5e-23
Identities = 50/104 (48%), Positives = 71/104 (68%)
Frame = +1
Query: 121 RVRLYVRGTVLGYKRSKSNQYETTSLVQIEGVNTKEDVAWYCGKRMAYIYKAKTKSSGTH 300
++ +YV+G L Y+RSK SL+QIE V T +D +Y GKR+AY+Y+A + G+
Sbjct: 1 QILVYVKGKHLSYQRSKHVNNPNVSLIQIENVGTPQDAKFYLGKRIAYVYRASKEIRGSK 60
Query: 301 YRCIWGKVARPHGNSGVVRAKFRSNLPPESMGRKVRVFMYPSSI 432
R IWGKV R HG++GVVRA F+ NLP ++ G VR+ +YPS+I
Sbjct: 61 IRVIWGKVTRTHGSNGVVRANFKKNLPAKTFGASVRIMLYPSNI 104
>gb|AAY21901.1| ribosomal protein L35a [Cirrhinus molitorella]
Length = 110
Score = 110 bits (275), Expect = 5e-23
Identities = 55/108 (50%), Positives = 76/108 (70%), Gaps = 6/108 (5%)
Frame = +1
Query: 127 RLYVRGTVLGYKRSKSNQYETTSLVQIEGVNTKEDVAWYCGKRMAYIYKAKTKSSGT--- 297
RL+ + GYKR NQ+E T+L+++EGV + +V +Y GKR AY+YKAK K++ T
Sbjct: 4 RLWSKAIFAGYKRGLRNQHEHTALLKLEGVYNRSEVDFYLGKRCAYMYKAK-KTTATPGG 62
Query: 298 ---HYRCIWGKVARPHGNSGVVRAKFRSNLPPESMGRKVRVFMYPSSI 432
R IWGKV R HGNSG+VRAKFRSNLP +++G ++RV +YPS +
Sbjct: 63 KPNKTRVIWGKVTRAHGNSGMVRAKFRSNLPAKAIGHRIRVMLYPSRV 110
>ref|NP_000987.2| ribosomal protein L35a [Homo sapiens]
gb|AAH61890.1| Ribosomal protein L35a [Homo sapiens]
ref|XP_858367.1| PREDICTED: similar to ribosomal protein L35a isoform 4 [Canis
familiaris]
ref|XP_858326.1| PREDICTED: similar to ribosomal protein L35a isoform 3 [Canis
familiaris]
ref|XP_535773.1| PREDICTED: similar to ribosomal protein L35a isoform 1 [Canis
familiaris]
emb|CAH91904.1| hypothetical protein [Pongo pygmaeus]
gb|AAH17093.1| RPL35A protein [Homo sapiens]
gb|AAH10949.1| Ribosomal protein L35a [Homo sapiens]
gb|AAH01037.1| Ribosomal protein L35a [Homo sapiens]
sp|P18077|RL35A_HUMAN 60S ribosomal protein L35a
dbj|BAC21647.1| ribosomal protein L35a [Macaca fascicularis]
sp|P61272|RL35A_MACFA 60S ribosomal protein L35a
sp|Q5R8K6|RL35A_PONPY 60S ribosomal protein L35a
Length = 110
Score = 110 bits (275), Expect = 5e-23
Identities = 54/107 (50%), Positives = 72/107 (67%), Gaps = 5/107 (4%)
Frame = +1
Query: 127 RLYVRGTVLGYKRSKSNQYETTSLVQIEGVNTKEDVAWYCGKRMAYIYKAKTKS-----S 291
RL+ + GYKR NQ E T+L++IEGV +++ +Y GKR AY+YKAK +
Sbjct: 4 RLWSKAIFAGYKRGLRNQREHTALLKIEGVYARDETEFYLGKRCAYVYKAKNNTVTPGGK 63
Query: 292 GTHYRCIWGKVARPHGNSGVVRAKFRSNLPPESMGRKVRVFMYPSSI 432
R IWGKV R HGNSG+VRAKFRSNLP +++G ++RV +YPS I
Sbjct: 64 PNKTRVIWGKVTRAHGNSGMVRAKFRSNLPAKAIGHRIRVMLYPSRI 110
>gb|AAX36977.1| ribosomal protein L35a [synthetic construct]
Length = 111
Score = 110 bits (275), Expect = 5e-23
Identities = 54/107 (50%), Positives = 72/107 (67%), Gaps = 5/107 (4%)
Frame = +1
Query: 127 RLYVRGTVLGYKRSKSNQYETTSLVQIEGVNTKEDVAWYCGKRMAYIYKAKTKS-----S 291
RL+ + GYKR NQ E T+L++IEGV +++ +Y GKR AY+YKAK +
Sbjct: 4 RLWSKAIFAGYKRGLRNQREHTALLKIEGVYARDEAEFYLGKRCAYVYKAKNNTVTPGGK 63
Query: 292 GTHYRCIWGKVARPHGNSGVVRAKFRSNLPPESMGRKVRVFMYPSSI 432
R IWGKV R HGNSG+VRAKFRSNLP +++G ++RV +YPS I
Sbjct: 64 PNKTRVIWGKVTRAHGNSGMVRAKFRSNLPAKAIGHRIRVMLYPSRI 110
>gb|AAW82114.1| RPL35A protein [Bos taurus]
ref|NP_001020492.1| ribosomal protein L35a [Bos taurus]
gb|AAI11655.1| Ribosomal protein L35a [Bos taurus]
Length = 110
Score = 110 bits (274), Expect = 6e-23
Identities = 53/107 (49%), Positives = 72/107 (67%), Gaps = 5/107 (4%)
Frame = +1
Query: 127 RLYVRGTVLGYKRSKSNQYETTSLVQIEGVNTKEDVAWYCGKRMAYIYKAKTKS-----S 291
RL+ + GYKR NQ E T+L++IEGV +++ +Y GKR AY+YKAK +
Sbjct: 4 RLWSKAIFAGYKRGLRNQREHTALLKIEGVYARDETEFYLGKRCAYVYKAKNNTVTPGGK 63
Query: 292 GTHYRCIWGKVARPHGNSGVVRAKFRSNLPPESMGRKVRVFMYPSSI 432
R IWGK+ R HGNSG+VRAKFRSNLP +++G ++RV +YPS I
Sbjct: 64 PNKTRVIWGKITRAHGNSGMVRAKFRSNLPAKAIGHRIRVMLYPSRI 110
>ref|XP_504662.1| hypothetical protein [Yarrowia lipolytica]
emb|CAG80266.1| unnamed protein product [Yarrowia lipolytica CLIB122]
Length = 107
Score = 110 bits (274), Expect = 6e-23
Identities = 49/101 (48%), Positives = 73/101 (72%)
Frame = +1
Query: 130 LYVRGTVLGYKRSKSNQYETTSLVQIEGVNTKEDVAWYCGKRMAYIYKAKTKSSGTHYRC 309
+YV+G + Y+RSK SLV+IEGV+ ++ +Y GKR+AY+Y+A+ + G+ R
Sbjct: 7 VYVKGKHISYQRSKRVVNPNVSLVKIEGVSNPDEAKFYVGKRVAYVYRAEKEIRGSKVRV 66
Query: 310 IWGKVARPHGNSGVVRAKFRSNLPPESMGRKVRVFMYPSSI 432
+WGK++R HGNSGVVRA+FR NLP ++ G VR+ +YPS+I
Sbjct: 67 MWGKISRTHGNSGVVRARFRHNLPAKTFGSSVRIMLYPSNI 107
>emb|CAJ17421.1| ribosomal protein L35Ae [Cicindela campestris]
Length = 146
Score = 109 bits (273), Expect = 8e-23
Identities = 52/110 (47%), Positives = 72/110 (65%), Gaps = 8/110 (7%)
Frame = +1
Query: 127 RLYVRGTVLGYKRSKSNQYETTSLVQIEGVNTKEDVAWYCGKRMAYIYKAKTKSS--GTH 300
RLY + GYKR NQ+E T+L++IEG K D +Y GK+ ++YKA K+S G H
Sbjct: 37 RLYAKAIFTGYKRGLRNQHENTALLKIEGCGKKVDSWFYVGKKCVFVYKAAKKTSVPGAH 96
Query: 301 ------YRCIWGKVARPHGNSGVVRAKFRSNLPPESMGRKVRVFMYPSSI 432
R IWGKV RPHG +G VRAKF+ NLP ++MG ++R+ +YPS++
Sbjct: 97 KTKKSKVRAIWGKVTRPHGTTGAVRAKFKRNLPAKAMGHRIRIMLYPSTV 146
>gb|AAH76321.1| Hypothetical protein LOC436760 [Danio rerio]
ref|NP_001002487.1| hypothetical protein LOC436760 [Danio rerio]
Length = 110
Score = 109 bits (273), Expect = 8e-23
Identities = 53/107 (49%), Positives = 74/107 (69%), Gaps = 5/107 (4%)
Frame = +1
Query: 127 RLYVRGTVLGYKRSKSNQYETTSLVQIEGVNTKEDVAWYCGKRMAYIYKAKTKSSG---- 294
RL+ + GYKR NQ E T+L+++EGV + +V +Y GKR AY+YKAK K++
Sbjct: 4 RLWSKAIFAGYKRGLRNQREHTALLKLEGVYNRGEVDFYLGKRCAYVYKAKKKTATPGGK 63
Query: 295 -THYRCIWGKVARPHGNSGVVRAKFRSNLPPESMGRKVRVFMYPSSI 432
R IWGKV R HGNSG+VRAKF+SNLP +++G ++RV +YPS +
Sbjct: 64 PNKTRVIWGKVTRAHGNSGMVRAKFKSNLPAKAIGHRIRVMLYPSRV 110
>dbj|BAC32698.1| unnamed protein product [Mus musculus]
Length = 110
Score = 108 bits (271), Expect = 1e-22
Identities = 53/107 (49%), Positives = 71/107 (66%), Gaps = 5/107 (4%)
Frame = +1
Query: 127 RLYVRGTVLGYKRSKSNQYETTSLVQIEGVNTKEDVAWYCGKRMAYIYKAKTKS-----S 291
RL+ + GYKR N E T+L++IEGV +++ +Y GKR AY+YKAK +
Sbjct: 4 RLWCKAIFAGYKRGLRNHREHTALLKIEGVYARDETEFYLGKRCAYVYKAKNNTVTPGGK 63
Query: 292 GTHYRCIWGKVARPHGNSGVVRAKFRSNLPPESMGRKVRVFMYPSSI 432
R IWGKV R HGNSG+VRAKFRSNLP +++G ++RV +YPS I
Sbjct: 64 PNKTRVIWGKVTRAHGNSGMVRAKFRSNLPAKAIGHRIRVMLYPSRI 110
>emb|CAB58374.1| SPCP31B10.08c [Schizosaccharomyces pombe]
ref|NP_587864.1| hypothetical protein SPCP31B10.08c [Schizosaccharomyces pombe
972h-]
sp|Q9USG6|RL33B_SCHPO 60S ribosomal protein L33-B (L37B)
Length = 108
Score = 108 bits (270), Expect = 2e-22
Identities = 50/102 (49%), Positives = 71/102 (69%)
Frame = +1
Query: 127 RLYVRGTVLGYKRSKSNQYETTSLVQIEGVNTKEDVAWYCGKRMAYIYKAKTKSSGTHYR 306
RLYV+ L ++RSK + TS+V+IEG ++KE+ +Y GKR+ Y+YK+ G+ R
Sbjct: 7 RLYVKAKHLSFQRSKHVIHPGTSIVKIEGCDSKEEAQFYLGKRVCYVYKSSKAVRGSKIR 66
Query: 307 CIWGKVARPHGNSGVVRAKFRSNLPPESMGRKVRVFMYPSSI 432
IWG +ARPHGNSG VRA+F NLP ++ G +RV +YPS+I
Sbjct: 67 VIWGTIARPHGNSGAVRARFVHNLPAKTFGSSLRVMLYPSNI 108
>gb|AAX79036.1| 60S ribosomal protein L35A, putative [Trypanosoma brucei]
gb|AAZ10809.1| 60S ribosomal protein L35A, putative [Trypanosoma brucei]
ref|XP_825240.1| 60S ribosomal protein L35A [Trypanosoma brucei TREU927]
Length = 149
Score = 108 bits (269), Expect = 2e-22
Identities = 54/115 (46%), Positives = 73/115 (63%), Gaps = 13/115 (11%)
Frame = +1
Query: 127 RLYVRGTVLGYKRSKSNQYETTSLVQIEGVNTKEDVAWYCGKRMAYIY------------ 270
RLY++GT+ GY R Q + T+LV+IE VNT ED WY GKR+ Y+Y
Sbjct: 37 RLYMKGTLAGYTRGLHGQNKNTALVRIENVNTTEDAKWYVGKRVCYVYHGYKIKRCVRWS 96
Query: 271 KAKTKSSGTHYRCIWGKVARPHGNSGVVRAKFR-SNLPPESMGRKVRVFMYPSSI 432
KA + S T R IWG++ RPHG SG VR KF S++P ++GR++RV++YPS I
Sbjct: 97 KAPARRSNT--RAIWGRITRPHGTSGTVRVKFNGSSVPASAIGRRIRVYLYPSRI 149
>emb|CAG02142.1| unnamed protein product [Tetraodon nigroviridis]
Length = 110
Score = 108 bits (269), Expect = 2e-22
Identities = 52/107 (48%), Positives = 72/107 (67%), Gaps = 5/107 (4%)
Frame = +1
Query: 127 RLYVRGTVLGYKRSKSNQYETTSLVQIEGVNTKEDVAWYCGKRMAYIYKAKTKS-----S 291
RL+ + GYKR NQ E T+L+++EG T+++V +Y GKR AY+YKAK +
Sbjct: 4 RLWSKAIFAGYKRGLRNQREHTALLKVEGCYTRDEVDFYLGKRCAYVYKAKKNTVTPGGK 63
Query: 292 GTHYRCIWGKVARPHGNSGVVRAKFRSNLPPESMGRKVRVFMYPSSI 432
R IWGKV R HGNSG+VRAKF SNLP +++G ++RV +YPS +
Sbjct: 64 PNKTRVIWGKVTRAHGNSGMVRAKFSSNLPAKAIGHRIRVMLYPSRV 110
>ref|XP_821812.1| ribosomal protein L35A [Trypanosoma cruzi strain CL Brener]
gb|EAN99961.1| ribosomal protein L35A, putative [Trypanosoma cruzi]
Length = 149
Score = 107 bits (268), Expect = 3e-22
Identities = 56/121 (46%), Positives = 75/121 (61%), Gaps = 13/121 (10%)
Frame = +1
Query: 109 RTGQRVRLYVRGTVLGYKRSKSNQYETTSLVQIEGVNTKEDVAWYCGKRMAYIY------ 270
R + RLY++ + GY R Q + T++V+IE VNTKED AWY GKR+ Y+Y
Sbjct: 31 RNRKSPRLYMKAVLAGYTRGLHGQNKNTAIVRIENVNTKEDAAWYVGKRVCYVYHGYKMK 90
Query: 271 ------KAKTKSSGTHYRCIWGKVARPHGNSGVVRAKFR-SNLPPESMGRKVRVFMYPSS 429
KA + S T R IWG+V RPHG SG VRAKF S +P ++G++VRV++YPS
Sbjct: 91 RCVRWSKAPARRSNT--RAIWGRVTRPHGGSGAVRAKFNGSAVPASAIGKRVRVYLYPSR 148
Query: 430 I 432
I
Sbjct: 149 I 149
>emb|CAJ07960.1| ribosomal protein l35a, putative [Leishmania major]
emb|CAJ02338.1| ribosomal protein l35a, putative [Leishmania major]
Length = 144
Score = 107 bits (268), Expect = 3e-22
Identities = 52/121 (42%), Positives = 78/121 (64%), Gaps = 13/121 (10%)
Frame = +1
Query: 109 RTGQRVRLYVRGTVLGYKRSKSNQYETTSLVQIEGVNTKEDVAWYCGKRMAYIY------ 270
R + RLY++GT+ GY R Q + T+LV++E VNT+ED WY GKR+ Y+Y
Sbjct: 26 RNRKAPRLYMKGTLAGYTRGLHGQTKQTALVRVENVNTREDATWYVGKRVCYVYHGKKVK 85
Query: 271 ------KAKTKSSGTHYRCIWGKVARPHGNSGVVRAKFR-SNLPPESMGRKVRVFMYPSS 429
KA + S T R +WG+V RPHGN+G++R KF +++P ++GR++RV++YPS
Sbjct: 86 RCVRWSKAPARRSTT--RALWGRVTRPHGNAGMMRVKFNGASVPASAIGRRIRVYLYPSQ 143
Query: 430 I 432
I
Sbjct: 144 I 144
>emb|CAA37138.1| unnamed protein product [Homo sapiens]
Length = 110
Score = 107 bits (268), Expect = 3e-22
Identities = 53/107 (49%), Positives = 71/107 (66%), Gaps = 5/107 (4%)
Frame = +1
Query: 127 RLYVRGTVLGYKRSKSNQYETTSLVQIEGVNTKEDVAWYCGKRMAYIYKAKTKS-----S 291
RL+ + GYKR NQ E T+L++IEGV +++ +Y GKR AY+YKAK +
Sbjct: 4 RLWSKAIFAGYKRGLRNQREHTALLKIEGVYARDETEFYLGKRCAYVYKAKNNTVTPGGK 63
Query: 292 GTHYRCIWGKVARPHGNSGVVRAKFRSNLPPESMGRKVRVFMYPSSI 432
R IWGKV R HGNSG+V AKFRSNLP +++G ++RV +YPS I
Sbjct: 64 PNKTRVIWGKVTRAHGNSGMVLAKFRSNLPAKAIGHRIRVMLYPSRI 110
>ref|XP_646794.1| 60S ribosomal protein L35a [Dictyostelium discoideum]
gb|EAL72562.1| ribosomal protein L35a [Dictyostelium discoideum]
Length = 105
Score = 107 bits (267), Expect = 4e-22
Identities = 48/103 (46%), Positives = 76/103 (73%), Gaps = 1/103 (0%)
Frame = +1
Query: 127 RLYVRGTVLGYKRSKSNQYETTSLVQIEGVNTKEDVAWYCGKRMAYIYK-AKTKSSGTHY 303
++Y +G VLGY+RS++ QY SL++IEGV ++ED +Y GK++ + K +K+ + T +
Sbjct: 3 KIYSKGVVLGYRRSQATQYPNISLIKIEGVVSREDSTFYLGKKVCLVSKVSKSAKNPTGH 62
Query: 304 RCIWGKVARPHGNSGVVRAKFRSNLPPESMGRKVRVFMYPSSI 432
+ WGK+ + HG+SGVV+A+F NLPP++MG VRV +YPS+I
Sbjct: 63 KISWGKICKTHGSSGVVQARFARNLPPKAMGAPVRVMLYPSNI 105
>gb|AAV84243.1| ribosomal protein L35 [Culicoides sonorensis]
Length = 160
Score = 107 bits (266), Expect = 5e-22
Identities = 48/109 (44%), Positives = 71/109 (65%), Gaps = 7/109 (6%)
Frame = +1
Query: 127 RLYVRGTVLGYKRSKSNQYETTSLVQIEGVNTKEDVAWYCGKRMAYIYKAKTKSSG---- 294
RL+ + GYKR NQ+E+ ++++IEG +++ +Y GKR Y+YK K++ S
Sbjct: 52 RLWAKAVFTGYKRGLRNQHESQAILKIEGCRNRKNSLFYVGKRCVYVYKGKSRQSSPTNS 111
Query: 295 ---THYRCIWGKVARPHGNSGVVRAKFRSNLPPESMGRKVRVFMYPSSI 432
T R +WGKV R HGNSG VRAKF+ NLP ++MG ++R+ +YPS I
Sbjct: 112 KHKTRLRAVWGKVTRLHGNSGSVRAKFKKNLPGDAMGHRIRIMLYPSRI 160
>ref|XP_489548.2| PREDICTED: similar to ribosomal protein L35a [Mus musculus]
ref|XP_920387.1| PREDICTED: similar to ribosomal protein L35a [Mus musculus]
Length = 288
Score = 106 bits (265), Expect = 7e-22
Identities = 54/107 (50%), Positives = 74/107 (69%), Gaps = 5/107 (4%)
Frame = +1
Query: 127 RLYVRGTVLGYKRSKSNQYETTSLVQIEGVNTKEDVAWYCGKRMAYIYKAK--TKSSG-- 294
RL+ + GYK+ NQ E ++L++IEGV +++ +Y GKR AY+YKAK T + G
Sbjct: 182 RLWYKAIFAGYKQGLRNQREHSALLKIEGVYARDETEFYLGKRCAYVYKAKHNTATPGGK 241
Query: 295 -THYRCIWGKVARPHGNSGVVRAKFRSNLPPESMGRKVRVFMYPSSI 432
R IWGKV R HGNSG+VRAKFRSNLP +++G ++RV +YPS I
Sbjct: 242 PNATRVIWGKVTRAHGNSGMVRAKFRSNLPAKAIGHRIRVTLYPSRI 288
>dbj|BAA33367.1| ribosomal protein L37 homolog [Schizosaccharomyces pombe]
Length = 107
Score = 106 bits (265), Expect = 7e-22
Identities = 49/102 (48%), Positives = 70/102 (68%)
Frame = +1
Query: 127 RLYVRGTVLGYKRSKSNQYETTSLVQIEGVNTKEDVAWYCGKRMAYIYKAKTKSSGTHYR 306
RLYV+ L ++RS + TS+V+IEG ++KE+ +Y GKR+ Y+YK+ G+ R
Sbjct: 6 RLYVKAKHLSFQRSNHVIHPGTSIVKIEGCDSKEEAQFYLGKRVCYVYKSSKAVRGSKIR 65
Query: 307 CIWGKVARPHGNSGVVRAKFRSNLPPESMGRKVRVFMYPSSI 432
IWG +ARPHGNSG VRA+F NLP ++ G +RV +YPS+I
Sbjct: 66 VIWGTIARPHGNSGAVRARFVHNLPAKTFGSSLRVMLYPSNI 107
>gb|AAR10024.1| similar to Drosophila melanogaster CG2099 [Drosophila yakuba]
Length = 157
Score = 105 bits (263), Expect = 1e-21
Identities = 49/109 (44%), Positives = 68/109 (62%), Gaps = 7/109 (6%)
Frame = +1
Query: 127 RLYVRGTVLGYKRSKSNQYETTSLVQIEGVNTKEDVAWYCGKRMAYIYKAKTKSS----- 291
RL+ + GYKR NQ+E ++++IEG KE ++Y GKR Y+YKA+TK
Sbjct: 49 RLFAKAVFTGYKRGLRNQHENQAILKIEGARRKEHGSFYVGKRCVYVYKAETKKCVPQHP 108
Query: 292 --GTHYRCIWGKVARPHGNSGVVRAKFRSNLPPESMGRKVRVFMYPSSI 432
T R +WGKV R HGN+G VRA+F NLP +MG ++R+ +YPS I
Sbjct: 109 ERKTRVRAVWGKVTRIHGNTGAVRARFNRNLPGHAMGHRIRIMLYPSRI 157
>gb|AAR09815.1| similar to Drosophila melanogaster CG2099 [Drosophila yakuba]
Length = 157
Score = 105 bits (263), Expect = 1e-21
Identities = 49/109 (44%), Positives = 68/109 (62%), Gaps = 7/109 (6%)
Frame = +1
Query: 127 RLYVRGTVLGYKRSKSNQYETTSLVQIEGVNTKEDVAWYCGKRMAYIYKAKTKSS----- 291
RL+ + GYKR NQ+E ++++IEG KE ++Y GKR Y+YKA+TK
Sbjct: 49 RLFAKAVFTGYKRGLRNQHENQAILKIEGARRKEHGSFYVGKRCVYVYKAETKKCVPQHP 108
Query: 292 --GTHYRCIWGKVARPHGNSGVVRAKFRSNLPPESMGRKVRVFMYPSSI 432
T R +WGKV R HGN+G VRA+F NLP +MG ++R+ +YPS I
Sbjct: 109 ERKTRVRAVWGKVTRIHGNTGAVRARFNRNLPGHAMGHRIRIMLYPSRI 157
>gb|AAL49354.1| RH44960p [Drosophila melanogaster]
ref|NP_649539.1| Ribosomal protein L35A CG2099-PA [Drosophila melanogaster]
gb|AAL48758.1| RE17737p [Drosophila melanogaster]
gb|AAF52027.1| CG2099-PA [Drosophila melanogaster]
Length = 157
Score = 105 bits (263), Expect = 1e-21
Identities = 49/109 (44%), Positives = 68/109 (62%), Gaps = 7/109 (6%)
Frame = +1
Query: 127 RLYVRGTVLGYKRSKSNQYETTSLVQIEGVNTKEDVAWYCGKRMAYIYKAKTKSS----- 291
RL+ + GYKR NQ+E ++++IEG KE ++Y GKR Y+YKA+TK
Sbjct: 49 RLFAKAVFTGYKRGLRNQHENQAILKIEGARRKEHGSFYVGKRCVYVYKAETKKCVPQHP 108
Query: 292 --GTHYRCIWGKVARPHGNSGVVRAKFRSNLPPESMGRKVRVFMYPSSI 432
T R +WGKV R HGN+G VRA+F NLP +MG ++R+ +YPS I
Sbjct: 109 ERKTRVRAVWGKVTRIHGNTGAVRARFNRNLPGHAMGHRIRIMLYPSRI 157
>gb|EAA07823.3| ENSANGP00000022149 [Anopheles gambiae str. PEST]
ref|XP_312171.2| ENSANGP00000022149 [Anopheles gambiae str. PEST]
Length = 158
Score = 105 bits (262), Expect = 2e-21
Identities = 48/108 (44%), Positives = 71/108 (65%), Gaps = 6/108 (5%)
Frame = +1
Query: 127 RLYVRGTVLGYKRSKSNQYETTSLVQIEGVNTKEDVAWYCGKRMAYIYKAKTKSSG---- 294
RL+ + GYKR NQ+E +L++IEG +++V +Y GKR Y+Y+ K+K +
Sbjct: 51 RLWAKAVFTGYKRGLRNQHEKHALLKIEGCRNRKNVLFYIGKRCVYVYRGKSKQNHPGSN 110
Query: 295 --THYRCIWGKVARPHGNSGVVRAKFRSNLPPESMGRKVRVFMYPSSI 432
+ R IWGK+ R HGNSG VRA+FR+NLP +MG ++R+ +YPS I
Sbjct: 111 KKSTIRAIWGKITRSHGNSGSVRARFRTNLPGHAMGHRIRIMLYPSRI 158
>ref|XP_946171.1| PREDICTED: similar to ribosomal protein L35a [Homo sapiens]
Length = 230
Score = 105 bits (262), Expect = 2e-21
Identities = 52/112 (46%), Positives = 72/112 (64%), Gaps = 5/112 (4%)
Frame = +1
Query: 112 TGQRVRLYVRGTVLGYKRSKSNQYETTSLVQIEGVNTKEDVAWYCGKRMAYIYKAKTKS- 288
T RL+ + GYK NQ E T+L++IEGV ++++ +Y GKR AY+YKAK +
Sbjct: 119 TNMSGRLWSKAIFAGYKWGLWNQREHTALLKIEGVYARDEIEFYLGKRCAYVYKAKNNTV 178
Query: 289 ----SGTHYRCIWGKVARPHGNSGVVRAKFRSNLPPESMGRKVRVFMYPSSI 432
R IWGK+ R HGNSG+V AKFRSNLP +++G ++RV +YPS I
Sbjct: 179 TPGGKPNKTRVIWGKITRAHGNSGMVSAKFRSNLPAKAIGHRIRVMLYPSRI 230
>ref|XP_909195.1| PREDICTED: similar to ribosomal protein L35a [Mus musculus]
Length = 110
Score = 105 bits (262), Expect = 2e-21
Identities = 54/107 (50%), Positives = 74/107 (69%), Gaps = 5/107 (4%)
Frame = +1
Query: 127 RLYVRGTVLGYKRSKSNQYETTSLVQIEGVNTKEDVAWYCGKRMAYIYKAK--TKSSG-- 294
RL+ + GYKR NQ E T+L++IEGV +++ +Y GKR AY+YKAK T + G
Sbjct: 4 RLWCKAIFAGYKRGLRNQREHTALLKIEGVYARDEKEFYLGKRCAYVYKAKHNTATPGGK 63
Query: 295 -THYRCIWGKVARPHGNSGVVRAKFRSNLPPESMGRKVRVFMYPSSI 432
R IWGKV+R HGNS +VRAKFRS+LP +++G ++RV +YPS I
Sbjct: 64 PNKTRVIWGKVSRAHGNSCMVRAKFRSHLPAKAIGHRIRVMLYPSQI 110
>ref|XP_620305.1| PREDICTED: similar to ribosomal protein L35a [Mus musculus]
Length = 110
Score = 105 bits (261), Expect = 2e-21
Identities = 54/107 (50%), Positives = 73/107 (68%), Gaps = 5/107 (4%)
Frame = +1
Query: 127 RLYVRGTVLGYKRSKSNQYETTSLVQIEGVNTKEDVAWYCGKRMAYIYKAK--TKSSG-- 294
RL+ + GYKR NQ E T+L++IEGV +++ +Y GKR AY+YKAK T + G
Sbjct: 4 RLWCKAIFAGYKRGLRNQREHTALLKIEGVYARDEKEFYLGKRCAYVYKAKHNTATPGGK 63
Query: 295 -THYRCIWGKVARPHGNSGVVRAKFRSNLPPESMGRKVRVFMYPSSI 432
R IWGKV R HGNS +VRAKFRS+LP +++G ++RV +YPS I
Sbjct: 64 PNKTRVIWGKVTRAHGNSCMVRAKFRSHLPAKAIGHRIRVMLYPSQI 110
>gb|EAL28507.1| GA15239-PA [Drosophila pseudoobscura]
Length = 159
Score = 104 bits (260), Expect = 3e-21
Identities = 49/109 (44%), Positives = 67/109 (61%), Gaps = 7/109 (6%)
Frame = +1
Query: 127 RLYVRGTVLGYKRSKSNQYETTSLVQIEGVNTKEDVAWYCGKRMAYIYKAKTKSS----- 291
RL+ + GYKR NQ+E ++++IEG KE +Y GKR Y+YKA+TK
Sbjct: 51 RLFAKAVFTGYKRGLRNQHENQAILKIEGARRKEHGEFYVGKRCVYVYKAETKKCVPQHP 110
Query: 292 --GTHYRCIWGKVARPHGNSGVVRAKFRSNLPPESMGRKVRVFMYPSSI 432
T R +WGKV R HGN+G VRA+F NLP +MG ++R+ +YPS I
Sbjct: 111 ERKTRVRAVWGKVIRIHGNTGAVRARFNRNLPGHAMGHRIRIMLYPSRI 159
>ref|XP_754768.1| 60s ribosomal protein l37b [Aspergillus fumigatus Af293]
gb|EAL92730.1| 60s ribosomal protein l37b [Aspergillus fumigatus Af293]
Length = 119
Score = 103 bits (258), Expect = 5e-21
Identities = 46/80 (57%), Positives = 64/80 (80%)
Frame = +1
Query: 193 SLVQIEGVNTKEDVAWYCGKRMAYIYKAKTKSSGTHYRCIWGKVARPHGNSGVVRAKFRS 372
SL++I+GV++ E +Y GK++A++Y+AK + G++ R IWGKV RPHGNSGVVRA+FR
Sbjct: 40 SLIKIDGVDSTEAANFYLGKKVAFVYRAKREVRGSNIRVIWGKVTRPHGNSGVVRAQFRH 99
Query: 373 NLPPESMGRKVRVFMYPSSI 432
NLPP+S G VRV +YPS+I
Sbjct: 100 NLPPKSFGATVRVMLYPSNI 119
>ref|XP_213045.1| PREDICTED: similar to ribosomal protein L35a [Rattus norvegicus]
Length = 110
Score = 102 bits (254), Expect = 1e-20
Identities = 51/107 (47%), Positives = 68/107 (63%), Gaps = 5/107 (4%)
Frame = +1
Query: 127 RLYVRGTVLGYKRSKSNQYETTSLVQIEGVNTKEDVAWYCGKRMAYIYKAKTKS-----S 291
RL+ + GYKR NQ E +L++IEGV +++ +Y GKR AY+YKAK +
Sbjct: 4 RLWCKAIFAGYKRGLRNQRERMALLKIEGVYARDETEFYLGKRCAYVYKAKNNTVTPGGE 63
Query: 292 GTHYRCIWGKVARPHGNSGVVRAKFRSNLPPESMGRKVRVFMYPSSI 432
R IWGKV R HGNSG V AKFRSNLP +++G ++ V +YPS I
Sbjct: 64 PNKTRVIWGKVTRAHGNSGRVCAKFRSNLPAKAIGHRIHVMLYPSRI 110
>ref|XP_785082.1| PREDICTED: similar to ribosomal protein L35a [Strongylocentrotus
purpuratus]
Length = 142
Score = 102 bits (253), Expect = 2e-20
Identities = 46/101 (45%), Positives = 67/101 (66%), Gaps = 6/101 (5%)
Frame = +1
Query: 127 RLYVRGTVLGYKRSKSNQYETTSLVQIEGVNTKEDVAWYCGKRMAYIYKAKTKS------ 288
RLY R GY+R NQ E +L+++EGV ++ + WY GK++AY+YK K K+
Sbjct: 37 RLYSRAVFTGYRRGLRNQKENQALLKLEGVESRREATWYLGKKVAYVYKCKNKTKCPGKD 96
Query: 289 SGTHYRCIWGKVARPHGNSGVVRAKFRSNLPPESMGRKVRV 411
T+ R IWGK+ + HG SG RAKF+SNLP ++MG+++RV
Sbjct: 97 KPTNTRVIWGKIIKTHGKSGGCRAKFKSNLPGQAMGKRIRV 137
>ref|XP_213423.1| PREDICTED: similar to ribosomal protein L35a [Rattus norvegicus]
Length = 110
Score = 102 bits (253), Expect = 2e-20
Identities = 51/107 (47%), Positives = 69/107 (64%), Gaps = 5/107 (4%)
Frame = +1
Query: 127 RLYVRGTVLGYKRSKSNQYETTSLVQIEGVNTKEDVAWYCGKRMAYIYKAKTKS-----S 291
RL+ + GYKR NQ E + ++IEGV +++ +Y GKR AY+YKA+ +
Sbjct: 4 RLWCKAIFAGYKRVLRNQREHMAPLKIEGVYARDETEFYSGKRCAYVYKAQNNTVTPGGK 63
Query: 292 GTHYRCIWGKVARPHGNSGVVRAKFRSNLPPESMGRKVRVFMYPSSI 432
R IWGKV R HGNSG+VRAKFRSNLP +++G +RV +YPS I
Sbjct: 64 PNKTRVIWGKVTRAHGNSGMVRAKFRSNLPAKAIGHGIRVMLYPSRI 110
>ref|XP_619992.1| PREDICTED: similar to ribosomal protein L35a [Mus musculus]
Length = 110
Score = 99.4 bits (246), Expect = 1e-19
Identities = 49/98 (50%), Positives = 65/98 (66%), Gaps = 5/98 (5%)
Frame = +1
Query: 154 GYKRSKSNQYETTSLVQIEGVNTKEDVAWYCGKRMAYIYKAKTKS-----SGTHYRCIWG 318
GY+R NQ E T+L++IEGV +++ +Y GKR AY+YKAK + R IWG
Sbjct: 13 GYRRGLRNQREHTTLLKIEGVYARDETEFYLGKRCAYVYKAKNNTVTPGGKPNKTRVIWG 72
Query: 319 KVARPHGNSGVVRAKFRSNLPPESMGRKVRVFMYPSSI 432
KV R HGNSG+V AKFRSNLP ++ G ++ V +YPS I
Sbjct: 73 KVTRAHGNSGMVCAKFRSNLPAKAAGHRICVMLYPSRI 110
>gb|EAQ93367.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
Length = 91
Score = 96.7 bits (239), Expect = 7e-19
Identities = 44/80 (55%), Positives = 58/80 (72%)
Frame = +1
Query: 193 SLVQIEGVNTKEDVAWYCGKRMAYIYKAKTKSSGTHYRCIWGKVARPHGNSGVVRAKFRS 372
+L++IEGV+ +Y GKR+AY+Y+ + + GT R IWGKV RPHGNSGVVRAKF +
Sbjct: 12 NLIKIEGVDDTAAANFYAGKRVAYVYRGQKEVRGTKIRVIWGKVTRPHGNSGVVRAKFTT 71
Query: 373 NLPPESMGRKVRVFMYPSSI 432
LP +S G VR+ +YPSSI
Sbjct: 72 PLPSKSFGASVRIMLYPSSI 91
>ref|XP_896020.1| PREDICTED: similar to ribosomal protein L35a [Mus musculus]
ref|XP_915414.1| PREDICTED: similar to ribosomal protein L35a [Mus musculus]
Length = 110
Score = 96.3 bits (238), Expect = 9e-19
Identities = 49/107 (45%), Positives = 70/107 (65%), Gaps = 5/107 (4%)
Frame = +1
Query: 127 RLYVRGTVLGYKRSKSNQYETTSLVQIEGVNTKEDVAWYCGKRMAYIYKAKTKS-----S 291
RL+ + YKR NQ T+L++IEGV ++++ ++ GKR A +YKAK +
Sbjct: 4 RLWCKVIFAVYKRGLRNQRAHTALLKIEGVYARDEMEFFLGKRCACVYKAKNNTVTPGGK 63
Query: 292 GTHYRCIWGKVARPHGNSGVVRAKFRSNLPPESMGRKVRVFMYPSSI 432
+ R IWGKV R HGNSG+V AKFRSNLP +++G ++RV +YPS I
Sbjct: 64 PSKPRVIWGKVTRAHGNSGMVIAKFRSNLPAKAVGHRIRVMLYPSRI 110
>ref|NP_001018813.1| hypothetical protein SPBC1921.01c [Schizosaccharomyces pombe 972h-]
emb|CAD99404.1| rpl3701 [Schizosaccharomyces pombe]
Length = 79
Score = 96.3 bits (238), Expect = 9e-19
Identities = 41/79 (51%), Positives = 59/79 (74%)
Frame = +1
Query: 196 LVQIEGVNTKEDVAWYCGKRMAYIYKAKTKSSGTHYRCIWGKVARPHGNSGVVRAKFRSN 375
LV+IEG ++KE+ +Y GKR+ ++YK+ G+ R IWG V+RPHGNSGVVRA+F N
Sbjct: 1 LVKIEGCDSKEEAQFYLGKRICFVYKSNKPVRGSKIRVIWGTVSRPHGNSGVVRARFTHN 60
Query: 376 LPPESMGRKVRVFMYPSSI 432
LPP++ G +RV +YPS++
Sbjct: 61 LPPKTFGASLRVMLYPSNV 79
>ref|XP_958318.1| hypothetical protein [Neurospora crassa N150]
ref|XP_331501.1| hypothetical protein [Neurospora crassa]
gb|EAA29082.1| hypothetical protein [Neurospora crassa]
Length = 91
Score = 95.9 bits (237), Expect = 1e-18
Identities = 44/80 (55%), Positives = 57/80 (71%)
Frame = +1
Query: 193 SLVQIEGVNTKEDVAWYCGKRMAYIYKAKTKSSGTHYRCIWGKVARPHGNSGVVRAKFRS 372
+L++IEGV+ +Y GKR+AY+Y+ + + GT R IWGKV RPHGNSGVVRAKF +
Sbjct: 12 NLIKIEGVDDTAAANFYLGKRVAYVYRGQKEVRGTKIRVIWGKVTRPHGNSGVVRAKFAA 71
Query: 373 NLPPESMGRKVRVFMYPSSI 432
LP S G VR+ +YPSSI
Sbjct: 72 PLPSRSFGASVRIMLYPSSI 91
>ref|XP_923150.1| PREDICTED: similar to ribosomal protein L35a [Mus musculus]
Length = 172
Score = 95.5 bits (236), Expect = 2e-18
Identities = 51/107 (47%), Positives = 67/107 (62%), Gaps = 5/107 (4%)
Frame = +1
Query: 127 RLYVRGTVLGYKRSKSNQYETTSLVQIEGVNTKEDVAWYCGKRMAYIYKAKTK-----SS 291
RL+ + GYKR NQ E T+L++IEGV +++ +Y GKR AY+YKAK S
Sbjct: 66 RLWGKAIFAGYKRGLRNQREHTALLKIEGVYARDETEFYLGKRCAYVYKAKYNTVIPGSK 125
Query: 292 GTHYRCIWGKVARPHGNSGVVRAKFRSNLPPESMGRKVRVFMYPSSI 432
R I KV R HGNS +VRAKFRS LP ++ G ++RV +YPS I
Sbjct: 126 PNKTRAILEKVTRAHGNSDMVRAKFRSYLPAKASGHRIRVMLYPSWI 172
>ref|NP_001027677.1| r35a protein [Ciona intestinalis]
emb|CAC82551.1| putative 60S ribosomal protein L35a [Ciona intestinalis]
Length = 122
Score = 95.1 bits (235), Expect = 2e-18
Identities = 47/94 (50%), Positives = 62/94 (65%), Gaps = 5/94 (5%)
Frame = +1
Query: 127 RLYVRGTVLGYKRSKSNQYETTSLVQIEGVNTKEDVAWYCGKRMAYIYKAKTKS-----S 291
RL+ + GY R NQ+E T+L++IEGV KED +Y GK+ AY+YKAK K+
Sbjct: 4 RLWCKAVFTGYTRGLRNQHEHTALLRIEGVTNKEDTDFYLGKKCAYVYKAKRKTKTPRGE 63
Query: 292 GTHYRCIWGKVARPHGNSGVVRAKFRSNLPPESM 393
R IWGKV R HGNSGVVRA F++NLP +++
Sbjct: 64 PNKTRVIWGKVTRSHGNSGVVRATFKTNLPAKAI 97
>ref|XP_487671.2| PREDICTED: similar to ribosomal protein L35a [Mus musculus]
Length = 172
Score = 91.3 bits (225), Expect = 3e-17
Identities = 49/107 (45%), Positives = 65/107 (60%), Gaps = 5/107 (4%)
Frame = +1
Query: 127 RLYVRGTVLGYKRSKSNQYETTSLVQIEGVNTKEDVAWYCGKRMAYIYKAKTK-----SS 291
RL+ + GYKR NQ E T+L++IEGV +++ +Y KR AY+YKAK S
Sbjct: 66 RLWGKAIFAGYKRGLRNQREHTALLKIEGVYARDETEFYLSKRCAYVYKAKYNTVIPGSK 125
Query: 292 GTHYRCIWGKVARPHGNSGVVRAKFRSNLPPESMGRKVRVFMYPSSI 432
R I KV R HGNS +VRAKFRS LP ++ G ++ V +YPS I
Sbjct: 126 PNKTRAILEKVTRAHGNSDMVRAKFRSYLPAKASGHRIHVMLYPSWI 172
>emb|CAI15713.1| ribosomal protein L35a pseudogene 3 [Homo sapiens]
Length = 96
Score = 82.8 bits (203), Expect = 1e-14
Identities = 44/93 (47%), Positives = 58/93 (62%), Gaps = 5/93 (5%)
Frame = +1
Query: 127 RLYVRGTVLGYKRSKSNQYETTSLVQIEGVNTKEDVAWYCGKRMAYIYKAKTK-----SS 291
RL+ + GYKRS NQ E T+L++IEG +++ +Y GKR A +YKAK+ S
Sbjct: 3 RLWSKSFFAGYKRSLQNQREHTALLKIEGGYAQDETEFYLGKRCACVYKAKSNTMIPGSK 62
Query: 292 GTHYRCIWGKVARPHGNSGVVRAKFRSNLPPES 390
R IWGKV R H NSG+V AKF SNLP ++
Sbjct: 63 PNKSRVIWGKVTRAHRNSGMVAAKFHSNLPAKA 95
>gb|AAY97887.1| unknown [Schistosoma japonicum]
Length = 128
Score = 81.6 bits (200), Expect = 2e-14
Identities = 38/100 (38%), Positives = 62/100 (62%)
Frame = +1
Query: 124 VRLYVRGTVLGYKRSKSNQYETTSLVQIEGVNTKEDVAWYCGKRMAYIYKAKTKSSGTHY 303
VRL+ + LG++R+++ Q +L++IEGVN +Y GKR+ I +A + G +
Sbjct: 27 VRLWAKAAFLGFRRTRNTQDTNQALLKIEGVNDHVAAQYYLGKRVVQISRASNATKGK-F 85
Query: 304 RCIWGKVARPHGNSGVVRAKFRSNLPPESMGRKVRVFMYP 423
R WG+++R HG +GV A F NL P ++G +RVF++P
Sbjct: 86 RTSWGRISRAHGRNGVATALFARNLNPAAIGSTLRVFLFP 125
>ref|XP_770097.1| ribosomal protein L35a [Giardia lamblia ATCC 50803]
gb|EAA39925.1| GLP_479_47445_47074 [Giardia lamblia ATCC 50803]
Length = 123
Score = 79.7 bits (195), Expect = 9e-14
Identities = 42/108 (38%), Positives = 66/108 (61%)
Frame = +1
Query: 91 VEMVKGRTGQRVRLYVRGTVLGYKRSKSNQYETTSLVQIEGVNTKEDVAWYCGKRMAYIY 270
+E +KG+T ++ +GY+RS++ Q E +LV++ G+ T+ + G+ +A I+
Sbjct: 1 MEEIKGKT------FLPAIFVGYQRSRAKQRENVALVKVSGIYTRAETDKVLGRLIAIIH 54
Query: 271 KAKTKSSGTHYRCIWGKVARPHGNSGVVRAKFRSNLPPESMGRKVRVF 414
K I+GK+ RPHGNSG+VRA+F +NLP + MG KVRVF
Sbjct: 55 SKSGKP-------IFGKICRPHGNSGMVRARFYTNLPGQLMGHKVRVF 95
>emb|CAA24701.1| unnamed protein product [Xenopus laevis]
Length = 70
Score = 78.6 bits (192), Expect = 2e-13
Identities = 39/71 (54%), Positives = 49/71 (69%), Gaps = 6/71 (8%)
Frame = +1
Query: 238 WYCGKRMAYIYKAKTKSSGTH------YRCIWGKVARPHGNSGVVRAKFRSNLPPESMGR 399
+Y GKR AY+YKAK + TH R IWGKV R HGNSG+VR KF SNLP +++G
Sbjct: 1 FYFGKRCAYVYKAKNNTV-THGGKPNRTRVIWGKVTRAHGNSGMVRTKFHSNLPAKAIGH 59
Query: 400 KVRVFMYPSSI 432
++RV +YPS I
Sbjct: 60 RIRVMLYPSRI 70
>gb|AAK08095.1| putative 60S ribosomal protein L35a [Ceratitis capitata]
Length = 65
Score = 69.7 bits (169), Expect = 9e-11
Identities = 33/64 (51%), Positives = 41/64 (64%), Gaps = 7/64 (10%)
Frame = +1
Query: 262 YIYKAKTKSS-------GTHYRCIWGKVARPHGNSGVVRAKFRSNLPPESMGRKVRVFMY 420
Y+YKAKTK T R IWGKV R HGN+G VRA+F NLP +MG ++R+ +Y
Sbjct: 2 YVYKAKTKKCVPQHPERKTRIRAIWGKVTRLHGNTGSVRARFNRNLPGHAMGHRIRIMLY 61
Query: 421 PSSI 432
PS I
Sbjct: 62 PSRI 65
>gb|AAP78707.1| ribosomal protein L35a [Equus caballus]
Length = 54
Score = 59.3 bits (142), Expect = 1e-07
Identities = 25/38 (65%), Positives = 32/38 (84%)
Frame = +1
Query: 304 RCIWGKVARPHGNSGVVRAKFRSNLPPESMGRKVRVFM 417
R IWGKV R HGNSG+VRAKFRSNLP +++G ++RV +
Sbjct: 17 RVIWGKVTRAHGNSGMVRAKFRSNLPAKAIGHRIRVVL 54
>ref|XP_896905.1| PREDICTED: similar to ribosomal protein L35a [Mus musculus]
Length = 133
Score = 58.5 bits (140), Expect = 2e-07
Identities = 24/37 (64%), Positives = 31/37 (83%)
Frame = +1
Query: 310 IWGKVARPHGNSGVVRAKFRSNLPPESMGRKVRVFMY 420
IWGKV R HGNS +VRAKFRSNLP +++G ++RV +Y
Sbjct: 2 IWGKVTRAHGNSSMVRAKFRSNLPAKAIGHRIRVMLY 38
>pdb|1SQR|A Chain A, Solution Structure Of The 50s Ribosomal Protein L35ae From
Pyrococcus Furiosus. Northeast Structural Genomics
Consortium Target Pfr48
Length = 95
Score = 57.8 bits (138), Expect = 4e-07
Identities = 29/94 (30%), Positives = 53/94 (56%)
Frame = +1
Query: 136 VRGTVLGYKRSKSNQYETTSLVQIEGVNTKEDVAWYCGKRMAYIYKAKTKSSGTHYRCIW 315
++G VL Y+RSK NQ+ +++ VN++E+ + G+ + + K+ S + +
Sbjct: 3 IKGVVLSYRRSKENQHNNVMIIKPLDVNSREEASKLIGRLVLW----KSPSG----KILK 54
Query: 316 GKVARPHGNSGVVRAKFRSNLPPESMGRKVRVFM 417
GK+ R HG G VRA+F LP +++G V + +
Sbjct: 55 GKIVRVHGTKGAVRARFEKGLPGQALGDYVEIVL 88
>sp|P20299|RL35A_PYRWO 50S ribosomal protein L35Ae
Length = 87
Score = 57.4 bits (137), Expect = 5e-07
Identities = 29/92 (31%), Positives = 52/92 (56%)
Frame = +1
Query: 136 VRGTVLGYKRSKSNQYETTSLVQIEGVNTKEDVAWYCGKRMAYIYKAKTKSSGTHYRCIW 315
++G VL Y+RSK NQ+ +++ VN++E+ + G+ + + K+ S + +
Sbjct: 3 IKGVVLSYRRSKENQHNNVMIIKPLDVNSREEASKLIGRLVLW----KSPSG----KILK 54
Query: 316 GKVARPHGNSGVVRAKFRSNLPPESMGRKVRV 411
GK+ R HG G VRA+F LP +++G V +
Sbjct: 55 GKIVRVHGTKGAVRARFEKGLPGQALGDYVEI 86
>emb|CAB49307.1| rpl35AE LSU ribosomal protein L35AE [Pyrococcus abyssi GE5]
ref|NP_126076.1| 50S ribosomal protein L35 [Pyrococcus abyssi GE5]
sp|Q9V1P2|RL35A_PYRAB 50S ribosomal protein L35Ae
Length = 87
Score = 57.4 bits (137), Expect = 5e-07
Identities = 29/92 (31%), Positives = 52/92 (56%)
Frame = +1
Query: 136 VRGTVLGYKRSKSNQYETTSLVQIEGVNTKEDVAWYCGKRMAYIYKAKTKSSGTHYRCIW 315
++G VL Y+RSK NQ+ +++ VN++E+ + G+ + + K+ S + +
Sbjct: 3 IKGVVLSYRRSKENQHTNVMIIKPLNVNSREEASKLIGRLVIW----KSPSG----KLLK 54
Query: 316 GKVARPHGNSGVVRAKFRSNLPPESMGRKVRV 411
GK+ R HG G VRA+F LP +++G V +
Sbjct: 55 GKIVRVHGTKGAVRARFEKGLPGQALGDYVEI 86
>gb|AAL81996.1| LSU ribosomal protein L35AE; (rpl35AE) [Pyrococcus furiosus DSM
3638]
sp|Q8TZV6|RL35A_PYRFU 50S ribosomal protein L35Ae
ref|NP_579601.1| 50S ribosomal protein L35 [Pyrococcus furiosus DSM 3638]
Length = 87
Score = 57.4 bits (137), Expect = 5e-07
Identities = 29/92 (31%), Positives = 52/92 (56%)
Frame = +1
Query: 136 VRGTVLGYKRSKSNQYETTSLVQIEGVNTKEDVAWYCGKRMAYIYKAKTKSSGTHYRCIW 315
++G VL Y+RSK NQ+ +++ VN++E+ + G+ + + K+ S + +
Sbjct: 3 IKGVVLSYRRSKENQHNNVMIIKPLDVNSREEASKLIGRLVLW----KSPSG----KILK 54
Query: 316 GKVARPHGNSGVVRAKFRSNLPPESMGRKVRV 411
GK+ R HG G VRA+F LP +++G V +
Sbjct: 55 GKIVRVHGTKGAVRARFEKGLPGQALGDYVEI 86
>dbj|BAA30949.1| 87aa long hypothetical 50S ribosomal protein L35 [Pyrococcus
horikoshii OT3]
sp|O74099|RL35A_PYRHO 50S ribosomal protein L35Ae
ref|NP_143661.1| 50S ribosomal protein L35 [Pyrococcus horikoshii OT3]
Length = 87
Score = 56.6 bits (135), Expect = 8e-07
Identities = 28/92 (30%), Positives = 52/92 (56%)
Frame = +1
Query: 136 VRGTVLGYKRSKSNQYETTSLVQIEGVNTKEDVAWYCGKRMAYIYKAKTKSSGTHYRCIW 315
++G VL Y+RSK NQ+ +++ +N++E+ + G+ + + K+ S + +
Sbjct: 3 IKGVVLSYRRSKENQHTNVMIIKPLDINSREEASKLIGRLVVW----KSPSG----KVLK 54
Query: 316 GKVARPHGNSGVVRAKFRSNLPPESMGRKVRV 411
GK+ R HG G VRA+F LP +++G V +
Sbjct: 55 GKIVRVHGTRGAVRARFEKGLPGQALGDYVEI 86
>gb|AAR39151.1| NEQ303 [Nanoarchaeum equitans Kin4-M]
ref|NP_963590.1| 50S ribosomal protein L35 [Nanoarchaeum equitans Kin4-M]
Length = 85
Score = 53.1 bits (126), Expect = 9e-06
Identities = 30/92 (32%), Positives = 49/92 (53%)
Frame = +1
Query: 136 VRGTVLGYKRSKSNQYETTSLVQIEGVNTKEDVAWYCGKRMAYIYKAKTKSSGTHYRCIW 315
+RG V+ Y+R K Q +VQ E V K++ + GK++ I+K+ T +
Sbjct: 1 MRGIVISYRRGKHTQNNYQVIVQPENVFDKKEASKLVGKKV--IWKSPTGKTFV------ 52
Query: 316 GKVARPHGNSGVVRAKFRSNLPPESMGRKVRV 411
G + PHGN G VR +FR +P + +G+ V +
Sbjct: 53 GVITAPHGNKGKVRVRFRKGVPGQMLGKLVTI 84
>gb|EAR83273.1| hypothetical protein TTHERM_00992730 [Tetrahymena thermophila
SB210]
Length = 606
Score = 53.1 bits (126), Expect = 9e-06
Identities = 25/51 (49%), Positives = 38/51 (74%)
Frame = +1
Query: 160 KRSKSNQYETTSLVQIEGVNTKEDVAWYCGKRMAYIYKAKTKSSGTHYRCI 312
++SK Q +L++++ VNTKEDVA+Y GKR+ YIYK + K +G++YR I
Sbjct: 527 QKSKHTQNSNQALLKLQNVNTKEDVAFYQGKRVVYIYKGQ-KKNGSNYRVI 576
>ref|NP_584615.1| 60S RIBOSOMAL PROTEIN L35A (L33) [Encephalitozoon cuniculi GB-M1]
emb|CAD25119.1| 60S RIBOSOMAL PROTEIN L35A (L33) [Encephalitozoon cuniculi GB-M1]
Length = 113
Score = 52.8 bits (125), Expect = 1e-05
Identities = 31/98 (31%), Positives = 50/98 (51%)
Frame = +1
Query: 127 RLYVRGTVLGYKRSKSNQYETTSLVQIEGVNTKEDVAWYCGKRMAYIYKAKTKSSGTHYR 306
R + T + +KR + + L++I V +K++ + Y G + K + G Y
Sbjct: 13 RTTIPATFVSFKRGQRRLHPRHVLLKIRNVTSKDEASSYVGNGVVCY---KKNNEGERYP 69
Query: 307 CIWGKVARPHGNSGVVRAKFRSNLPPESMGRKVRVFMY 420
+ G + R HGNSG VRA+F NL P+ +G V V +Y
Sbjct: 70 -VHGVITRIHGNSGAVRARFTRNLDPKLLGTHVFVKLY 106
>gb|AAM01372.1| Ribosomal protein L35AE/L33A [Methanopyrus kandleri AV19]
ref|NP_613442.1| 50S ribosomal protein L35 [Methanopyrus kandleri AV19]
sp|Q8TYY6|RL35A_METKA 50S ribosomal protein L35Ae
Length = 90
Score = 52.0 bits (123), Expect = 2e-05
Identities = 27/89 (30%), Positives = 47/89 (52%)
Frame = +1
Query: 139 RGTVLGYKRSKSNQYETTSLVQIEGVNTKEDVAWYCGKRMAYIYKAKTKSSGTHYRCIWG 318
RG ++ Y+ + Q +++ EGV ++ + A GK + + K +G + I G
Sbjct: 6 RGVIVNYRMGRHTQDPRQCIIEFEGVESRSEAAQLIGKEVIW----KHPETG---KVIRG 58
Query: 319 KVARPHGNSGVVRAKFRSNLPPESMGRKV 405
KV HGN+G VR +F LP +++G +V
Sbjct: 59 KVVDTHGNNGAVRVRFERGLPGQALGTEV 87
>gb|EAR83272.1| hypothetical protein TTHERM_00992720 [Tetrahymena thermophila
SB210]
Length = 56
Score = 52.0 bits (123), Expect = 2e-05
Identities = 19/39 (48%), Positives = 30/39 (76%)
Frame = +1
Query: 310 IWGKVARPHGNSGVVRAKFRSNLPPESMGRKVRVFMYPS 426
IWG++ + HGN+GV A+F NLPP+++G +RV +YP+
Sbjct: 16 IWGRIGKAHGNNGVAVARFAHNLPPQAIGSVLRVMLYPN 54
>emb|CAB58967.1| rpl37-1 [Schizosaccharomyces pombe]
pir||T39785 ribosomal protein l37 - fission yeast (Schizosaccharomyces pombe)
(fragment)
Length = 63
Score = 51.6 bits (122), Expect = 3e-05
Identities = 24/57 (42%), Positives = 38/57 (66%)
Frame = +1
Query: 127 RLYVRGTVLGYKRSKSNQYETTSLVQIEGVNTKEDVAWYCGKRMAYIYKAKTKSSGT 297
RLYV+ L ++RSK + TSLV+IEG ++KE+ +Y GKR+ ++YK+ G+
Sbjct: 7 RLYVKAKHLSFQRSKHVIHPGTSLVKIEGCDSKEEAQFYLGKRICFVYKSNKPVRGS 63
>gb|ABB46359.1| ribosomal protein L35a [Ovis aries]
Length = 50
Score = 47.0 bits (110), Expect = 7e-04
Identities = 21/47 (44%), Positives = 31/47 (65%)
Frame = +1
Query: 127 RLYVRGTVLGYKRSKSNQYETTSLVQIEGVNTKEDVAWYCGKRMAYI 267
RL+ + GYKR NQ E T+L++IEGV +++ +Y GKR AY+
Sbjct: 4 RLWSKAIFAGYKRGLRNQREHTALLKIEGVYARDETEFYLGKRCAYV 50
>ref|ZP_01155762.1| Parallel beta-helix repeat protein [Oceanicola granulosus HTCC2516]
gb|EAR52072.1| Parallel beta-helix repeat protein [Oceanicola granulosus HTCC2516]
Length = 3143
Score = 37.4 bits (85), Expect = 0.52
Identities = 30/89 (33%), Positives = 39/89 (43%)
Frame = +3
Query: 42 HRPRPSLPGL*GQKLQRRDGEGAHGAAREALRPGHRPWIQAVQVEPVRDYVAGADRGGEH 221
HRP P + +RR +G HG A+ + G R Q P R G DRGG
Sbjct: 2134 HRPDPQRQ----RHRRRRQRDGRHGGAQHRHQRGRRE-----QGRPGR----GHDRGGRA 2180
Query: 222 QGGRRVVLREADGLHLQGQDQEQRHPLPL 308
GG +R G LQG+ + RH P+
Sbjct: 2181 GGG----VRRGRGGRLQGRSRRHRHRRPV 2205
>dbj|BAA81336.1| 133aa long hypothetical 50S ribosomal protein L35 [Aeropyrum pernix
K1]
sp|Q9Y9G4|RL35A_AERPE 50S ribosomal protein L35Ae
ref|NP_148538.1| 50S ribosomal protein L35 [Aeropyrum pernix K1]
Length = 133
Score = 36.6 bits (83), Expect = 0.89
Identities = 31/93 (33%), Positives = 44/93 (47%), Gaps = 2/93 (2%)
Frame = +1
Query: 139 RGTVLGYKRSKSNQYETTSLVQIEGVNTKEDVAWYCGKRMAYIYKAKTKSSGTHYRCIW- 315
RG VLGY+R + QY +LV++ +D R A +Y + Y ++
Sbjct: 44 RGVVLGYRRGTNTQYPQHALVKL----LLDD------PRKAGLYVSGIAFYRDRYGNVYK 93
Query: 316 GKVARPHG-NSGVVRAKFRSNLPPESMGRKVRV 411
G+V R HG GVV KF LP ++ G V V
Sbjct: 94 GRVLRLHGRRGGVVVVKFNPPLPGQATGGVVEV 126
>dbj|BAD85158.1| LSU ribosomal protein L35AE [Thermococcus kodakarensis KOD1]
ref|YP_183382.1| 50S ribosomal protein L35 [Thermococcus kodakarensis KOD1]
Length = 86
Score = 35.4 bits (80), Expect = 2.0
Identities = 23/91 (25%), Positives = 44/91 (48%)
Frame = +1
Query: 139 RGTVLGYKRSKSNQYETTSLVQIEGVNTKEDVAWYCGKRMAYIYKAKTKSSGTHYRCIWG 318
+ VL Y S ++ +++ VN + A G+++ + +T + R + G
Sbjct: 3 KAVVLSYVGSHEHRDPNRVILKPLDVNDRGSAARLIGRKVVW----RTPTG----RKLVG 54
Query: 319 KVARPHGNSGVVRAKFRSNLPPESMGRKVRV 411
K+ R HG G V+A F+ LP +++G V +
Sbjct: 55 KIVRTHGTRGEVKAVFKPGLPGQALGDYVEI 85
>gb|EAM74488.1| Aminoacyl-tRNA synthetase, class Ia [Kineococcus radiotolerans
SRS30216]
ref|ZP_00617775.1| Aminoacyl-tRNA synthetase, class Ia [Kineococcus radiotolerans
SRS30216]
Length = 1159
Score = 35.4 bits (80), Expect = 2.0
Identities = 25/60 (41%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Frame = +3
Query: 108 AHGAAREALRPGHRPW-IQAVQVEPVRDYVAGADRGGEHQGGRRVVLREADGLHLQGQDQ 284
A G A RPGH+P Q + P+R A AD GG H+GG +AD H G DQ
Sbjct: 172 ADGVGHVAQRPGHQPGRQQPPRRRPLRAVQARAD-GGRHRGG------DADPRHQDGADQ 224
>ref|ZP_00862776.1| putative Cytochrome P450 [Bradyrhizobium sp. BTAi1]
gb|EAP27111.1| putative Cytochrome P450 [Bradyrhizobium sp. BTAi1]
Length = 392
Score = 35.0 bits (79), Expect = 2.6
Identities = 22/62 (35%), Positives = 35/62 (56%)
Frame = +3
Query: 24 LTLLRSHRPRPSLPGL*GQKLQRRDGEGAHGAAREALRPGHRPWIQAVQVEPVRDYVAGA 203
+ + SH+P+ + L G + R+DG AH A R+A+ P P +AV+V + + A A
Sbjct: 55 IEVFSSHQPQGLMNRLMGHNMMRKDG-AAHLAERQAIAPAVSP--RAVRVHWLTQFQAHA 111
Query: 204 DR 209
DR
Sbjct: 112 DR 113
>dbj|BAD31759.1| hypothetical protein [Oryza sativa (japonica cultivar-group)]
dbj|BAD30503.1| hypothetical protein [Oryza sativa (japonica cultivar-group)]
Length = 91
Score = 34.7 bits (78), Expect = 3.4
Identities = 24/69 (34%), Positives = 30/69 (43%), Gaps = 9/69 (13%)
Frame = +3
Query: 51 RPSLPGL*GQKLQRRDGE--------GAHGAAREALRPGHRPWIQAVQVEPVRDYVAGA- 203
RP LPG GQ+ + G G AR +P PW +A V GA
Sbjct: 19 RPPLPGYIGQRKATLQAQPLPTLAYGGGTGRARLGFKPAAWPW-RAAAARAVTTGTGGAG 77
Query: 204 DRGGEHQGG 230
D GG+H+GG
Sbjct: 78 DGGGQHEGG 86
>ref|ZP_00569081.1| Short-chain dehydrogenase/reductase SDR [Frankia sp. EAN1pec]
gb|EAN16661.1| Short-chain dehydrogenase/reductase SDR [Frankia sp. EAN1pec]
Length = 524
Score = 34.7 bits (78), Expect = 3.4
Identities = 23/44 (52%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Frame = +3
Query: 201 ADRGGEHQGGRRVVLREADGLHLQGQDQEQR-HPLPLHLGQGRP 329
ADRG GGRR R DG+H GQ +QR P L GQGRP
Sbjct: 84 ADRGPA-DGGRR---RRGDGVHRLGQRPDQRAQPRRLRSGQGRP 123
>dbj|BAC85239.1| unnamed protein product [Homo sapiens]
Length = 236
Score = 34.3 bits (77), Expect = 4.4
Identities = 31/98 (31%), Positives = 41/98 (41%)
Frame = +3
Query: 3 GLVVAPSLTLLRSHRPRPSLPGL*GQKLQRRDGEGAHGAAREALRPGHRPWIQAVQVEPV 182
G + P TLL+ H S PGL GQ L R G+G R R H P V +
Sbjct: 143 GPIGLPPGTLLQEHLWGHSGPGLPGQGLLPRTGDGVVELRRPDQRRAHLPGCPTV----L 198
Query: 183 RDYVAGADRGGEHQGGRRVVLREADGLHLQGQDQEQRH 296
R + + +G R + LHLQ + Q Q+H
Sbjct: 199 RTLLP------QQRGDRALQQLGHPDLHLQRESQAQQH 230
>gb|AAC51251.1| Ig heavy chain variable region [Homo sapiens]
Length = 213
Score = 34.3 bits (77), Expect = 4.4
Identities = 31/98 (31%), Positives = 41/98 (41%)
Frame = +3
Query: 3 GLVVAPSLTLLRSHRPRPSLPGL*GQKLQRRDGEGAHGAAREALRPGHRPWIQAVQVEPV 182
G + P TLL+ H S PGL GQ L R G+G R R H P V +
Sbjct: 119 GPIGLPPGTLLQEHLWGHSGPGLPGQGLLPRTGDGVVELRRPDQRRAHLPGCPTV----L 174
Query: 183 RDYVAGADRGGEHQGGRRVVLREADGLHLQGQDQEQRH 296
R + + +G R + LHLQ + Q Q+H
Sbjct: 175 RTLLP------QQRGDRALQQLGHPDLHLQRESQAQQH 206
>gb|AAF25430.1| RecA protein [Micrococcus luteus]
Length = 152
Score = 33.9 bits (76), Expect = 5.7
Identities = 26/72 (36%), Positives = 31/72 (43%)
Frame = +3
Query: 90 RRDGEGAHGAAREALRPGHRPWIQAVQVEPVRDYVAGADRGGEHQGGRRVVLREADGLHL 269
RR G G HG AR PGHR + +P R DRG + R+ R A H+
Sbjct: 40 RRAGPGDHGHARLLGHPGHRRHRLCGRADPAR-----RDRGRD----GRLPRRPAGPPHV 90
Query: 270 QGQDQEQRHPLP 305
G Q R P P
Sbjct: 91 PGAAQGDRPPAP 102
>ref|ZP_00136488.2| COG0583: Transcriptional regulator [Pseudomonas aeruginosa
UCBPP-PA14]
Length = 271
Score = 33.9 bits (76), Expect = 5.7
Identities = 27/87 (31%), Positives = 38/87 (43%), Gaps = 18/87 (20%)
Frame = -1
Query: 249 PAVPRDVLLGVHPLDLHQRRSLVLVRLGPLVSKD--------------GAPD-VEPHALP 115
P V D++L +D+ ++R+ V VR GPL S GAP + H +P
Sbjct: 91 PEVTLDIVLTDEVVDILEQRTDVAVRAGPLKSSSLVARKLGSTRMLIVGAPAYLARHGMP 150
Query: 114 RAP---LHHLDAAASAPRVRGGWDVDD 43
P L H A+ R R GW + D
Sbjct: 151 ATPQALLGHNRLGANYVRTRSGWPLRD 177
>ref|ZP_00968508.1| COG0583: Transcriptional regulator [Pseudomonas aeruginosa C3719]
Length = 271
Score = 33.9 bits (76), Expect = 5.7
Identities = 27/87 (31%), Positives = 38/87 (43%), Gaps = 18/87 (20%)
Frame = -1
Query: 249 PAVPRDVLLGVHPLDLHQRRSLVLVRLGPLVSKD--------------GAPD-VEPHALP 115
P V D++L +D+ ++R+ V VR GPL S GAP + H +P
Sbjct: 91 PEVTLDIVLTDEVVDILEQRTDVAVRAGPLKSSSLVARKLGSTRMLIVGAPAYLARHGMP 150
Query: 114 RAP---LHHLDAAASAPRVRGGWDVDD 43
P L H A+ R R GW + D
Sbjct: 151 ATPQALLGHNRLGANYVRTRSGWPLRD 177
>gb|AAG06512.1| probable transcriptional regulator [Pseudomonas aeruginosa PAO1]
ref|NP_251814.1| probable transcriptional regulator [Pseudomonas aeruginosa PAO1]
ref|ZP_00974237.1| COG0583: Transcriptional regulator [Pseudomonas aeruginosa 2192]
Length = 303
Score = 33.9 bits (76), Expect = 5.7
Identities = 27/87 (31%), Positives = 38/87 (43%), Gaps = 18/87 (20%)
Frame = -1
Query: 249 PAVPRDVLLGVHPLDLHQRRSLVLVRLGPLVSKD--------------GAPD-VEPHALP 115
P V D++L +D+ ++R+ V VR GPL S GAP + H +P
Sbjct: 123 PEVTLDIVLTDEVVDILEQRTDVAVRAGPLKSSSLVARKLGSTRMLIVGAPAYLARHGMP 182
Query: 114 RAP---LHHLDAAASAPRVRGGWDVDD 43
P L H A+ R R GW + D
Sbjct: 183 ATPQALLGHNRLGANYVRTRSGWPLRD 209
>ref|XP_526809.1| PREDICTED: similar to wolframin [Pan troglodytes]
Length = 1145
Score = 33.9 bits (76), Expect = 5.7
Identities = 21/59 (35%), Positives = 29/59 (49%)
Frame = +3
Query: 84 LQRRDGEGAHGAAREALRPGHRPWIQAVQVEPVRDYVAGADRGGEHQGGRRVVLREADG 260
+Q R G G+A L HR W++ + D+ AG R G GG R+ REA+G
Sbjct: 130 IQGRLGPFRRGSAGPQLGEAHRDWLRCGVIGGRSDHSAG--RAGAASGGPRLEWREAEG 186
>gb|ABA99441.1| hypothetical protein LOC_Os12g43010 [Oryza sativa (japonica
cultivar-group)]
Length = 163
Score = 33.5 bits (75), Expect = 7.5
Identities = 26/80 (32%), Positives = 32/80 (40%)
Frame = +3
Query: 39 SHRPRPSLPGL*GQKLQRRDGEGAHGAAREALRPGHRPWIQAVQVEPVRDYVAGADRGGE 218
S RPRPS +K Q G+G R R + VQ+E + D GE
Sbjct: 74 SRRPRPSTAK--PKKTQEHTGQGRRRCHRRRWMDRRRKRVNCVQIEKLGD----ESTDGE 127
Query: 219 HQGGRRVVLREADGLHLQGQ 278
GG R + G H QGQ
Sbjct: 128 KNGGPLESSRGSLGRHAQGQ 147
>gb|AAB04535.1| anti-PAH immunoglobulin Fab 10C10 heavy chain V and CH1 regions
Length = 223
Score = 33.5 bits (75), Expect = 7.5
Identities = 21/77 (27%), Positives = 35/77 (45%)
Frame = +1
Query: 25 SLSSEAIVHVPASPDSRGRSCSVEMVKGRTGQRVRLYVRGTVLGYKRSKSNQYETTSLVQ 204
+ SS + V +P+ R +E+V G R Y TV G N + T +Q
Sbjct: 29 TFSSYFMSWVRQTPEKR-----LELVAGIDSSGYRTYYSDTVKGRFTISRNNAKNTLYLQ 83
Query: 205 IEGVNTKEDVAWYCGKR 255
+ G+ + + +YCG+R
Sbjct: 84 MSGLESGDTALYYCGRR 100
>ref|XP_693512.1| PREDICTED: similar to diacylglycerol kinase, delta 130kDa isoform 1,
partial [Danio rerio]
Length = 1032
Score = 33.5 bits (75), Expect = 7.5
Identities = 20/73 (27%), Positives = 35/73 (47%), Gaps = 2/73 (2%)
Frame = +1
Query: 34 SEAIVHVPASPDSRGRSCSVEMVKGRT--GQRVRLYVRGTVLGYKRSKSNQYETTSLVQI 207
SEA P+SP+ RS +V++V T Q ++ + G +L + S+ + +T
Sbjct: 916 SEAFPSKPSSPEGLSRSTAVDIVNSSTVLQQETKMLLEGKLLQLESSQKEELLSTVENLS 975
Query: 208 EGVNTKEDVAWYC 246
+ ED+ W C
Sbjct: 976 AELQKLEDIHWIC 988
>ref|XP_693499.1| PREDICTED: similar to diacylglycerol kinase, delta 130kDa isoform
1, partial [Danio rerio]
Length = 214
Score = 33.5 bits (75), Expect = 7.5
Identities = 20/73 (27%), Positives = 35/73 (47%), Gaps = 2/73 (2%)
Frame = +1
Query: 34 SEAIVHVPASPDSRGRSCSVEMVKGRT--GQRVRLYVRGTVLGYKRSKSNQYETTSLVQI 207
SEA P+SP+ RS +V++V T Q ++ + G +L + S+ + +T
Sbjct: 81 SEAFPSKPSSPEGLSRSTAVDIVNSSTVLQQETKMLLEGKLLQLESSQKEELLSTVENLS 140
Query: 208 EGVNTKEDVAWYC 246
+ ED+ W C
Sbjct: 141 AELQKLEDIHWIC 153
>gb|ABB07007.1| protein of unknown function DUF82 [Burkholderia sp. 383]
ref|YP_367651.1| protein of unknown function DUF82 [Burkholderia sp. 383]
Length = 254
Score = 33.5 bits (75), Expect = 7.5
Identities = 18/34 (52%), Positives = 20/34 (58%), Gaps = 7/34 (20%)
Frame = -1
Query: 138 DVEPHALP-------RAPLHHLDAAASAPRVRGG 58
D+ PH P APLH LDAAA+APRV G
Sbjct: 173 DLAPHMRPFRLCLRCNAPLHPLDAAAAAPRVPAG 206
Database: nr
Posted date: Apr 6, 2006 2:41 PM
Number of letters in database: 1,185,965,366
Number of sequences in database: 3,454,138
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,331,826,824
Number of Sequences: 3454138
Number of extensions: 26329224
Number of successful extensions: 74635
Number of sequences better than 10.0: 128
Number of HSP's better than 10.0 without gapping: 72164
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 74519
length of database: 1,185,965,366
effective HSP length: 126
effective length of database: 750,743,978
effective search space used: 81831093602
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)