BLASTN 2.2.6 [Apr-09-2003] BLASTN 2.2.6 [Apr-09-2003] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= QBN10e11.xg.2.4 (664 letters) Database: mais_NCBI.fasta 836,351 sequences; 669,372,029 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|32943890|gb|CF048709.1|CF048709 QCL26d11.yg QCL Zea mays cDNA... 950 0.0 gi|58082295|gb|AC155433.2| Zea mays strain B73 clone ZMMBBb0250I... 523 e-147 gi|32934270|gb|CF039082.1|CF039082 QCH31g01.yg QCH Zea mays cDNA... 468 e-130 gi|13198478|gb|BG354341.1|BG354341 947034H02.x1 947 - 2 week sho... 248 8e-64 gi|60351593|gb|DN218566.1|DN218566 MEST1068_C12.T7-1 UGA-ZmSAM-X... 242 5e-62 gi|28576027|gb|CB281919.1|CB281919 3529_1_13_1_D12.y_5 3529 - 2 ... 230 2e-58 gi|60401111|gb|DN233918.1|DN233918 MEST1148_D07.T7-1 UGA-ZmSAM-X... 230 2e-58 gi|71762257|gb|DR960194.1|DR960194 ZM_BFb0073L05.f ZM_BFb Zea ma... 230 2e-58 gi|76293536|gb|DV033104.1|DV033104 ZM_BFb0157C21.r ZM_BFb Zea ma... 230 2e-58 gi|78121085|gb|DV539469.1|DV539469 ZM_BFb0233F10.f ZM_BFb Zea ma... 230 2e-58 gi|78104569|gb|DV522987.1|DV522987 ZM_BFb0209A03.r ZM_BFb Zea ma... 224 1e-56 gi|78179966|gb|DV550339.1|DV550339 1000055-G08.GAD10-F UGI-Reseq... 222 4e-56 gi|76922985|gb|DV169277.1|DV169277 ZM_BFb0168E20.r ZM_BFb Zea ma... 214 1e-53 gi|78085881|gb|DV514274.1|DV514274 ZM_BFb0196C24.r ZM_BFb Zea ma... 214 1e-53 gi|78105475|gb|DV523893.1|DV523893 ZM_BFb0210F06.r ZM_BFb Zea ma... 210 2e-52 gi|32930470|gb|CF035282.1|CF035282 QCG16d05.yg QCG Zea mays cDNA... 198 6e-49 gi|71447574|gb|DR828624.1|DR828624 ZM_BFb0073L05.r ZM_BFb Zea ma... 188 6e-46 gi|78107302|gb|DV525720.1|DV525720 ZM_BFb0213A16.f ZM_BFb Zea ma... 188 6e-46 gi|78107303|gb|DV525721.1|DV525721 ZM_BFb0213A16.r ZM_BFb Zea ma... 188 6e-46 gi|88757246|gb|DY541387.1|DY541387 ZM_BFb0366F11.r ZM_BFb Zea ma... 184 1e-44 gi|6860033|gb|AW356027.1|AW356027 707018H11.x1 707 - Mixed adult... 180 1e-43 gi|78105474|gb|DV523892.1|DV523892 ZM_BFb0210F06.f ZM_BFb Zea ma... 180 1e-43 gi|12045841|gb|BF727980.1|BF727980 1000055G08.x3 1000 - Unigene ... 172 4e-41 gi|78121086|gb|DV539470.1|DV539470 ZM_BFb0233F10.r ZM_BFb Zea ma... 165 9e-39 gi|60396680|gb|DN229548.1|DN229548 MEST1065_B06.T7-1 UGA-ZmSAM-X... 159 5e-37 gi|67021905|gb|CO450654.1|CO450654 MZCCL10154B07.g Maize Endospe... 139 5e-31 gi|29577003|gb|CB617115.1|CB617115 3529_1_69_1_A11.y_1 3529 - 2 ... 111 1e-22 gi|86470680|gb|DY237050.1|DY237050 ZM_BFb0253O09.f ZM_BFb Zea ma... 94 3e-17 gi|88757091|gb|DY541232.1|DY541232 ZM_BFb0366B13.r ZM_BFb Zea ma... 94 3e-17 gi|76293535|gb|DV033103.1|DV033103 ZM_BFb0157C21.f ZM_BFb Zea ma... 92 1e-16 gi|29544983|gb|CB605161.1|CB605161 3529_1_69_1_A11.x_1 3529 - 2 ... 68 2e-09 gi|6021519|gb|AW066447.1|AW066447 660014E06.y1 660 - Mixed stage... 42 0.088 gi|6952458|gb|AW424526.1|AW424526 707017B01.y1 707 - Mixed adult... 42 0.088 gi|14204332|gb|BG838009.1|BG838009 Zm10_05f09_A Zm10_AAFC_ECORC_... 42 0.088 gi|14204333|gb|BG838010.1|BG838010 Zm10_05e11_A Zm10_AAFC_ECORC_... 42 0.088 gi|14208295|gb|BG841973.1|BG841973 MEST34-E12.T3 ISUM3-TL Zea ma... 42 0.088 gi|16918224|gb|BM073641.1|BM073641 MEST71-E10.T3 ISUM4-TN Zea ma... 42 0.088 gi|16925631|gb|BM078699.1|BM078699 MEST123-B11.T3 ISUM4-TN Zea m... 42 0.088 gi|32847179|gb|CD986860.1|CD986860 QAN4a06.yg QAN Zea mays cDNA ... 42 0.088 gi|33102858|gb|CF062818.1|CF062818 QCU14a06.yg QCU Zea mays cDNA... 42 0.088 gi|37395337|gb|CF634948.1|CF634948 zmrww00_0A20-004-h03.s4 zmrww... 42 0.088 gi|60346020|gb|DN212993.1|DN212993 MEST951_H12.T7-1 UGA-ZmSAM-XZ... 42 0.088 gi|60352650|gb|DN219623.1|DN219623 MEST1084_G04.T7-1 UGA-ZmSAM-X... 42 0.088 gi|60353870|gb|DN220843.1|DN220843 MEST1102_D10.T7-1 UGA-ZmSAM-X... 42 0.088 gi|60357761|gb|DN224734.1|DN224734 MEST1163_D03.T7-1 UGA-ZmSAM-X... 42 0.088 gi|60396969|gb|DN229788.1|DN229788 MEST1016_D03.T7-1 UGA-ZmSAM-X... 42 0.088 gi|67013084|gb|CO441833.1|CO441833 MZCCL10020D10.g Maize Endospe... 42 0.088 gi|67014880|gb|CO443629.1|CO443629 MZCCL10047G01.g Maize Endospe... 42 0.088 gi|67020577|gb|CO449326.1|CO449326 MZCCL10128A08.g Maize Endospe... 42 0.088 gi|67033428|gb|CO462177.1|CO462177 MZCCS20027H12.g Maize Endospe... 42 0.088 gi|67041438|gb|CO467693.1|CO467693 MZCCL10215C04.g Maize Endospe... 42 0.088 gi|78025715|gb|DV494102.1|DV494102 1000210-B11.T7-1 UGI-Reseq Ze... 42 0.088 gi|78116694|gb|DV535081.1|DV535081 ZM_BFb0226P06.f ZM_BFb Zea ma... 42 0.088 gi|1899059|gb|U79669.1|ZMU79669 Zea mays endosperm C-24 sterol m... 42 0.088 gi|2909845|gb|AF045570.1|AF045570 Zea mays (S)-adenosyl-L-methio... 42 0.088 gi|21206734|gb|AY103656.1| Zea mays PCO072714 mRNA sequence 42 0.088 gi|1899059|gb|U79669.1|ZMU79669 Zea mays endosperm C-24 sterol m... 42 0.088 gi|21206734|gb|AY103656.1| Zea mays PCO072714 mRNA sequence 42 0.088 gi|2909845|gb|AF045570.1|AF045570 Zea mays (S)-adenosyl-L-methio... 42 0.088 gi|5670853|gb|AI932116.1|AI932116 618021B03.x1 618 - Inbred Tass... 38 1.4 gi|14206629|gb|BG840307.1|BG840307 MEST9-E08.T7-1 ISUM4-TN Zea m... 38 1.4 gi|14245139|gb|BG873721.1|BG873721 MEST9-E08.T3 ISUM4-TN Zea may... 38 1.4 gi|21987920|gb|BQ779448.1|BQ779448 946120E08.x1 946 - tassel pri... 38 1.4 gi|30087747|gb|CB885953.1|CB885953 3529_1_91_1_C03.x_1 3529 - 2 ... 38 1.4 gi|60347708|gb|DN214681.1|DN214681 MEST888_F01.T7-1 UGA-ZmSAM-XZ... 38 1.4 gi|67037362|gb|CO464202.1|CO464202 MZCCL15044B07.g Maize Endospe... 38 1.4 gi|76930457|gb|DV172392.1|DV172392 ZM_BFb0173P06.r ZM_BFb Zea ma... 38 1.4 gi|78026210|gb|DV494597.1|DV494597 1000202-C09.T7-1 UGI-Reseq Ze... 38 1.4 gi|78027335|gb|DV495722.1|DV495722 1000202-C08.T7-1 UGI-Reseq Ze... 38 1.4 gi|78073795|gb|DV502229.1|DV502229 ZM_BFb0173P06.f ZM_BFb Zea ma... 38 1.4 gi|63093209|emb|CS078241.1| Sequence 85 from Patent WO2005035769 38 1.4 gi|47081123|gb|BV145020.1| PZA02483-76643-W22_R-scm2 Zea mays W2... 38 1.4 gi|47081122|gb|BV145019.1| PZA02483-76632-Tx501 Zea mays Tx501 Z... 38 1.4 gi|47081121|gb|BV145018.1| PZA02483-76641-Tx303 Zea mays Tx303 Z... 38 1.4 gi|47081120|gb|BV145017.1| PZA02483-76640-T218 Zea mays T218 Zea... 38 1.4 gi|47081119|gb|BV145016.1| PZA02483-76642-NC7A Zea mays NC7A Zea... 38 1.4 gi|47081118|gb|BV145015.1| PZA02483-76631-Mp708 Zea mays Mp708 Z... 38 1.4 gi|47081117|gb|BV145014.1| PZA02483-76639-Mo17 Zea mays Mo17 Zea... 38 1.4 gi|47081116|gb|BV145013.1| PZA02483-76629-GT119 Zea mays GT119 Z... 38 1.4 gi|47081115|gb|BV145012.1| PZA02483-76630-CO159 Zea mays CO159 Z... 38 1.4 gi|47081114|gb|BV145011.1| PZA02483-76628-B73 Zea mays B73 Zea m... 38 1.4 gi|92900909|gb|AC185476.1| Zea mays chromosome 4 clone CH201-216... 38 1.4 gi|91982828|gb|AC185284.1| Zea mays chromosome UNK clone CH201-2... 38 1.4 gi|88687860|gb|AC182827.1| Zea mays chromosome UNK clone CH201-1... 38 1.4 gi|54653580|gb|BT018799.1| Zea mays clone EL01N0528H08.d mRNA se... 36 5.4 gi|54653580|gb|BT018799.1| Zea mays clone EL01N0528H08.d mRNA se... 36 5.4 gi|88687870|gb|AC182837.1| Zea mays chromosome UNK clone CH201-1... 36 5.4 >gi|32943890|gb|CF048709.1|CF048709 QCL26d11.yg QCL Zea mays cDNA clone QCL26d11, mRNA sequence Length = 503 Score = 950 bits (479), Expect = 0.0 Identities = 481/482 (99%) Strand = Plus / Plus Query: 1 acggatgtcaggcaggccatcgccaagctcaatctcagccttggtggtcaaatgcttagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 22 acggatgtcaggcaggccatcgccaagctcaatctcagccttggtggtcaaatgcttagc 81 Query: 61 gttgttgggatcaaataggtcagtcaggcaccattcatccagtgcaaaatactgcccagg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 82 gttgttgggatcaaataggtcagtcaggcaccattcatccagtgcaaaatactgcccagg 141 Query: 121 tttcagcacacggtagacctcactatagacaccttgctgcgataaccagggataaagcaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 142 tttcagcacacggtagacctcactatagacaccttgctgcgataaccagggataaagcaa 201 Query: 181 acactgaatctgcgctattcctgtaaaaccttaactttactctcacaagtatgatgggag 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 202 acactgaatctgcgctattcctgtaaaaccttaactttactctcacaagtatgatgggag 261 Query: 241 acatactgcctccggtgcataacatgtagcctgtattgcataggccgcatcaaaggtatt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 262 acatactgcctccggtgcataacatgtagcctgtattgcataggccgcatcaaaggtatt 321 Query: 301 atcagctattggcatattcatgaagtcccccttcaaggagcagcattgctcactcaaacc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 322 atcagctattggcatattcatgaagtcccccttcaaggagcagcattgctcactcaaacc 381 Query: 361 tgctgaaaagatgtgctcctgcaaccaaaaattaaatggtgcatatccatatgctataca 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 382 tgctgaaaagatgtgctcctgcaaccaaaaattaaatggtgcatatccatatgctataca 441 Query: 421 gtttttgtgttccaaaaagaagnctaaaatgcaaaccttgccccttgagacatggtagtc 480 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 442 gtttttgtgttccaaaaagaaggctaaaatgcaaaccttgccccttgagacatggtagtc 501 Query: 481 at 482 || Sbjct: 502 at 503 >gi|58082295|gb|AC155433.2| Zea mays strain B73 clone ZMMBBb0250I08, *** SEQUENCING IN PROGRESS ***, 12 unordered pieces Length = 110753 Score = 523 bits (264), Expect = e-147 Identities = 319/335 (95%), Gaps = 3/335 (0%) Strand = Plus / Plus Query: 1 acggatgtcaggcaggccatcgccaagctcaatctcagccttggtggtcaaatgcttagc 60 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 59707 acggatgtcaggcaggccatcgccaagctcaatctcagccttggcggtcaaatgcttagc 59766 Query: 61 gttgttgggatcaaataggtcagtcaggcaccattcatccagtgcaaaatactgcccagg 120 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 59767 gttgttgggatcaaatcggtcagtcaggcaccattcatccagtgcaaaatactgcccagg 59826 Query: 121 tttcagcacacggtagacctcactatagacaccttgctgcgataaccagggataaagcaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 59827 tttcagcacacggtagacctcactatagacaccttgctgcgataaccagggataaaacaa 59886 Query: 181 acactgaatctgcgctattcctgtaaaaccttaacttt-act--ctcacaagtatgatgg 237 ||||||||| || | |||| |||| ||||||||||||| ||| |||||||||||||| Sbjct: 59887 acactgaatttgtggtatttctgtgaaaccttaactttgacttggacacaagtatgatgg 59946 Query: 238 gagacatactgcctccggtgcataacatgtagcctgtattgcataggccgcatcaaaggt 297 ||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 59947 gagacatactgcctctggtgcgtaacatgtagcctgtattgcataggccgcatcaaaggt 60006 Query: 298 attatcagctattggcatattcatgaagtccccct 332 |||||||||||||||||||||||||||||||||| Sbjct: 60007 gttatcagctattggcatattcatgaagtccccct 60041 Score = 307 bits (155), Expect = 1e-81 Identities = 195/213 (91%) Strand = Plus / Plus Query: 330 ccttcaaggagcagcattgctcactcaaacctgctgaaaagatgtgctcctgcaaccaaa 389 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 60138 ccttcaaggagcagcattgctcactcaaacctgctgaaaagatgtgctcctgcaaccaaa 60197 Query: 390 aattaaatggtgcatatccatatgctatacagtttttgtgttccaaaaagaagnctaaaa 449 ||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||| Sbjct: 60198 aattaaatggtgcatatccatatgctatacagtttttgtattccaaaaagaaggctaaat 60257 Query: 450 tgcaaaccttgccccttgagacatggtagtcattnnngntcaatccagnnattgnngttg 509 |||||||||||||||||||||||||||||||||| | ||||||||| |||| |||| Sbjct: 60258 tgcaaaccttgccccttgagacatggtagtcattgttggtcaatccagttattgaagttg 60317 Query: 510 agctacnnttnnaaganttaaaaattcatatat 542 |||||| || ||| | |||||||||||||| Sbjct: 60318 agctacaattaacagaatcaaaaattcatatat 60350 Score = 256 bits (129), Expect = 3e-66 Identities = 162/173 (93%) Strand = Plus / Plus Query: 1 acggatgtcaggcaggccatcgccaagctcaatctcagccttggtggtcaaatgcttagc 60 |||||||||||| |||||||| || |||||||||||||||||| ||| ||||||||| || Sbjct: 99100 acggatgtcaggtaggccatcaccgagctcaatctcagccttgatggccaaatgcttggc 99159 Query: 61 gttgttgggatcaaataggtcagtcaggcaccattcatccagtgcaaaatactgcccagg 120 |||||||||||||||| |||| |||| ||||||||||||||||||||||||||||||||| Sbjct: 99160 gttgttgggatcaaatcggtcggtcaagcaccattcatccagtgcaaaatactgcccagg 99219 Query: 121 tttcagcacacggtagacctcactatagacaccttgctgcgataaccagggat 173 |||||||||||||||||||||||||||||| |||||||||| ||||||||||| Sbjct: 99220 tttcagcacacggtagacctcactatagacgccttgctgcggtaaccagggat 99272 Score = 161 bits (81), Expect = 1e-37 Identities = 140/158 (88%), Gaps = 4/158 (2%) Strand = Plus / Plus Query: 330 ccttcaaggagcagcattgctcactcaaacctgctgaaaagatgtgctcctgcaaccaaa 389 |||||||| ||||||||||||||||||||||||||||||| ||| ||||||||||||||| Sbjct: 99529 ccttcaagaagcagcattgctcactcaaacctgctgaaaaaatgagctcctgcaaccaaa 99588 Query: 390 aattaaatggtgcatatccatatgctatacagtttt-tgtgttccaaaaag---aagnct 445 ||||||||| | ||||| ||||||||||| |||||| | | |||||||||| || || Sbjct: 99589 aattaaatgtttcatatacatatgctataaagttttatttattccaaaaaggaaaatgct 99648 Query: 446 aaaatgcaaaccttgccccttgagacatggtagtcatt 483 |||||| |||||||||||||||||| ||||||||||| Sbjct: 99649 aaaatgaaaaccttgccccttgagatgtggtagtcatt 99686 Score = 157 bits (79), Expect = 2e-36 Identities = 140/158 (88%), Gaps = 3/158 (1%) Strand = Plus / Plus Query: 178 caaacactgaatctgcgctattcctgtaaaaccttaacttt-actc--tcacaagtatga 234 |||||||||||||| | ||||||||| ||||||||||||| |||| ||||||||||| Sbjct: 99293 caaacactgaatctatggtattcctgtgaaaccttaactttgactcggacacaagtatga 99352 Query: 235 tgggagacatactgcctccggtgcataacatgtagcctgtattgcataggccgcatcaaa 294 |||||||||||| || ||||||| ||||||||||||||||||||||||||||||||| Sbjct: 99353 cacgagacatactgcatctggtgcatgacatgtagcctgtattgcataggccgcatcaaa 99412 Query: 295 ggtattatcagctattggcatattcatgaagtccccct 332 ||| ||||||| ||||||||| | |||||||||||||| Sbjct: 99413 ggtgttatcagatattggcatgtccatgaagtccccct 99450 >gi|32934270|gb|CF039082.1|CF039082 QCH31g01.yg QCH Zea mays cDNA clone QCH31g01, mRNA sequence Length = 603 Score = 468 bits (236), Expect = e-130 Identities = 257/267 (96%) Strand = Plus / Plus Query: 247 tgcctccggtgcataacatgtagcctgtattgcataggccgcatcaaaggtattatcagc 306 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 157 tgcctccggtgcataacatgtagcctgtattgcataggccgcatcaaaggtattatcagc 216 Query: 307 tattggcatattcatgaagtcccccttcaaggagcagcattgctcactcaaacctgctga 366 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 217 tattggcatattcatgaagtccccctccaaggagcagcattgctcactcaaacctgctga 276 Query: 367 aaagatgtgctcctgcaaccaaaaattaaatggtgcatatccatatgctatacagttttt 426 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 277 aaagatgtgctcctgcaaccaaaaattaaatggtgcatatccatatgctatacagttttt 336 Query: 427 gtgttccaaaaagaagnctaaaatgcaaaccttgccccttgagacatggtagtcattnnn 486 |||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 337 gtgttccaaaaagaaggctaaaatgcaaaccttgccccttgagacatggtagtcattgtt 396 Query: 487 gntcaatccagnnattgnngttgagct 513 | ||||||||| |||| |||||||| Sbjct: 397 ggtcaatccagttattgaagttgagct 423 Score = 309 bits (156), Expect = 2e-82 Identities = 156/156 (100%) Strand = Plus / Plus Query: 1 acggatgtcaggcaggccatcgccaagctcaatctcagccttggtggtcaaatgcttagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 acggatgtcaggcaggccatcgccaagctcaatctcagccttggtggtcaaatgcttagc 60 Query: 61 gttgttgggatcaaataggtcagtcaggcaccattcatccagtgcaaaatactgcccagg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 gttgttgggatcaaataggtcagtcaggcaccattcatccagtgcaaaatactgcccagg 120 Query: 121 tttcagcacacggtagacctcactatagacaccttg 156 |||||||||||||||||||||||||||||||||||| Sbjct: 121 tttcagcacacggtagacctcactatagacaccttg 156 >gi|13198478|gb|BG354341.1|BG354341 947034H02.x1 947 - 2 week shoot from Barkan lab Zea mays cDNA, mRNA sequence Length = 522 Score = 248 bits (125), Expect = 8e-64 Identities = 161/173 (93%) Strand = Plus / Minus Query: 1 acggatgtcaggcaggccatcgccaagctcaatctcagccttggtggtcaaatgcttagc 60 |||||||||||| |||||||| || |||||||||||||||||| ||| ||||||||| || Sbjct: 366 acggatgtcaggtaggccatcaccgagctcaatctcagccttgatggccaaatgcttggc 307 Query: 61 gttgttgggatcaaataggtcagtcaggcaccattcatccagtgcaaaatactgcccagg 120 |||||||||||||||| |||| |||| ||||||||||||||||||||||||||||||||| Sbjct: 306 gttgttgggatcaaatcggtcggtcaagcaccattcatccagtgcaaaatactgcccagg 247 Query: 121 tttcagcacacggtagacctcactatagacaccttgctgcgataaccagggat 173 |||||||||||||||||||||||||||||| || ||||||| ||||||||||| Sbjct: 246 tttcagcacacggtagacctcactatagacgccctgctgcggtaaccagggat 194 Score = 159 bits (80), Expect = 5e-37 Identities = 151/171 (88%), Gaps = 4/171 (2%) Strand = Plus / Minus Query: 178 caaacactgaatctgcgctattcctgtaaaaccttaacttt-actct--cacaagtatga 234 |||||||||||||| | ||||||||| ||||||||||||| |||| ||||||||||| Sbjct: 173 caaacactgaatctatggtattcctgtgaaaccttaactttgactcggacacaagtatga 114 Query: 235 tgggagacatactgcctccggtgcataacatgtagcctgtattgcataggccgcatcaaa 294 |||||||||||| || ||||||| ||||||||||||||||||||||||||||||||| Sbjct: 113 cacgagacatactgcatctggtgcatgacatgtagcctgtattgcataggccgcatcaaa 54 Query: 295 ggtattatcagctattggcatat-tcatgaagtcccccttcaaggagcagc 344 ||| ||||||| ||||||||| | ||||||||||||||||||| |||||| Sbjct: 53 ggtgttatcagatattggcatgtaccatgaagtcccccttcaagaagcagc 3 >gi|60351593|gb|DN218566.1|DN218566 MEST1068_C12.T7-1 UGA-ZmSAM-XZ2 Zea mays cDNA, mRNA sequence Length = 716 Score = 242 bits (122), Expect = 5e-62 Identities = 143/150 (95%) Strand = Plus / Plus Query: 1 acggatgtcaggcaggccatcgccaagctcaatctcagccttggtggtcaaatgcttagc 60 |||||||||||| |||||||| || |||||||||||||||||||||| |||||||||||| Sbjct: 567 acggatgtcaggtaggccatcaccgagctcaatctcagccttggtggccaaatgcttagc 626 Query: 61 gttgttgggatcaaataggtcagtcaggcaccattcatccagtgcaaaatactgcccagg 120 |||||||||||||||| |||| |||| ||||||||||||||||||||||||||||||||| Sbjct: 627 gttgttgggatcaaatcggtcggtcaagcaccattcatccagtgcaaaatactgcccagg 686 Query: 121 tttcagcacacggtagacctcactatagac 150 |||||||||||||||||||||||||||||| Sbjct: 687 tttcagcacacggtagacctcactatagac 716 >gi|28576027|gb|CB281919.1|CB281919 3529_1_13_1_D12.y_5 3529 - 2 mm ear tissue from Schmidt and Hake labs Zea mays cDNA, mRNA sequence Length = 604 Score = 230 bits (116), Expect = 2e-58 Identities = 146/156 (93%) Strand = Plus / Minus Query: 1 acggatgtcaggcaggccatcgccaagctcaatctcagccttggtggtcaaatgcttagc 60 |||||||||||| |||||||| || |||||||||||||||||| ||| ||||||||| || Sbjct: 354 acggatgtcaggtaggccatcaccgagctcaatctcagccttgatggccaaatgcttggc 295 Query: 61 gttgttgggatcaaataggtcagtcaggcaccattcatccagtgcaaaatactgcccagg 120 |||||||||||||||| |||| |||| ||||||||||||||||||||||||||||||||| Sbjct: 294 gttgttgggatcaaatcggtcggtcaagcaccattcatccagtgcaaaatactgcccagg 235 Query: 121 tttcagcacacggtagacctcactatagacaccttg 156 |||||||||||||||||||||||||||||| ||||| Sbjct: 234 tttcagcacacggtagacctcactatagacgccttg 199 Score = 188 bits (95), Expect = 6e-46 Identities = 119/127 (93%) Strand = Plus / Minus Query: 254 ggtgcataacatgtagcctgtattgcataggccgcatcaaaggtattatcagctattggc 313 ||||||| |||||||||||||||||||||||||||||||||||| ||||||| ||||||| Sbjct: 191 ggtgcatgacatgtagcctgtattgcataggccgcatcaaaggtgttatcagatattggc 132 Query: 314 atattcatgaagtcccccttcaaggagcagcattgctcactcaaacctgctgaaaagatg 373 || | ||||||||||||||||||| ||||||||||||||||||||||||||||||| ||| Sbjct: 131 atgtccatgaagtcccccttcaagaagcagcattgctcactcaaacctgctgaaaaaatg 72 Query: 374 tgctcct 380 |||||| Sbjct: 71 agctcct 65 Score = 40.1 bits (20), Expect = 0.35 Identities = 26/28 (92%) Strand = Plus / Minus Query: 456 ccttgccccttgagacatggtagtcatt 483 ||||||||||||||| ||||||||||| Sbjct: 67 ccttgccccttgagatgtggtagtcatt 40 >gi|60401111|gb|DN233918.1|DN233918 MEST1148_D07.T7-1 UGA-ZmSAM-XZ2 Zea mays cDNA, mRNA sequence Length = 683 Score = 230 bits (116), Expect = 2e-58 Identities = 146/156 (93%) Strand = Plus / Minus Query: 1 acggatgtcaggcaggccatcgccaagctcaatctcagccttggtggtcaaatgcttagc 60 |||||||||||| |||||||| || |||||||||||||||||| ||| ||||||||| || Sbjct: 189 acggatgtcaggtaggccatcaccgagctcaatctcagccttgatggccaaatgcttggc 130 Query: 61 gttgttgggatcaaataggtcagtcaggcaccattcatccagtgcaaaatactgcccagg 120 |||||||||||||||| |||| |||| ||||||||||||||||||||||||||||||||| Sbjct: 129 gttgttgggatcaaatcggtcggtcaagcaccattcatccagtgcaaaatactgcccagg 70 Query: 121 tttcagcacacggtagacctcactatagacaccttg 156 |||||||||||||||||||||||||||||| ||||| Sbjct: 69 tttcagcacacggtagacctcactatagacgccttg 34 Score = 44.1 bits (22), Expect = 0.022 Identities = 25/26 (96%) Strand = Plus / Minus Query: 254 ggtgcataacatgtagcctgtattgc 279 ||||||| |||||||||||||||||| Sbjct: 26 ggtgcatgacatgtagcctgtattgc 1 >gi|71762257|gb|DR960194.1|DR960194 ZM_BFb0073L05.f ZM_BFb Zea mays cDNA 3', mRNA sequence Length = 762 Score = 230 bits (116), Expect = 2e-58 Identities = 146/156 (93%) Strand = Plus / Plus Query: 1 acggatgtcaggcaggccatcgccaagctcaatctcagccttggtggtcaaatgcttagc 60 |||||||||||| |||||||| || |||||||||||||||||| ||| ||||||||| || Sbjct: 603 acggatgtcaggtaggccatcaccgagctcaatctcagccttgatggccaaatgcttggc 662 Query: 61 gttgttgggatcaaataggtcagtcaggcaccattcatccagtgcaaaatactgcccagg 120 |||||||||||||||| |||| |||| ||||||||||||||||||||||||||||||||| Sbjct: 663 gttgttgggatcaaatcggtcggtcaagcaccattcatccagtgcaaaatactgcccagg 722 Query: 121 tttcagcacacggtagacctcactatagacaccttg 156 |||||||||||||||||||||||||||||| ||||| Sbjct: 723 tttcagcacacggtagacctcactatagacgccttg 758 >gi|76293536|gb|DV033104.1|DV033104 ZM_BFb0157C21.r ZM_BFb Zea mays cDNA 5', mRNA sequence Length = 852 Score = 230 bits (116), Expect = 2e-58 Identities = 146/156 (93%) Strand = Plus / Minus Query: 1 acggatgtcaggcaggccatcgccaagctcaatctcagccttggtggtcaaatgcttagc 60 |||||||||||| |||||||| || |||||||||||||||||| ||| ||||||||| || Sbjct: 728 acggatgtcaggtaggccatcaccgagctcaatctcagccttgatggccaaatgcttggc 669 Query: 61 gttgttgggatcaaataggtcagtcaggcaccattcatccagtgcaaaatactgcccagg 120 |||||||||||||||| |||| |||| ||||||||||||||||||||||||||||||||| Sbjct: 668 gttgttgggatcaaatcggtcggtcaagcaccattcatccagtgcaaaatactgcccagg 609 Query: 121 tttcagcacacggtagacctcactatagacaccttg 156 |||||||||||||||||||||||||||||| ||||| Sbjct: 608 tttcagcacacggtagacctcactatagacgccttg 573 Score = 188 bits (95), Expect = 6e-46 Identities = 119/127 (93%) Strand = Plus / Minus Query: 254 ggtgcataacatgtagcctgtattgcataggccgcatcaaaggtattatcagctattggc 313 ||||||| |||||||||||||||||||||||||||||||||||| ||||||| ||||||| Sbjct: 565 ggtgcatgacatgtagcctgtattgcataggccgcatcaaaggtgttatcagatattggc 506 Query: 314 atattcatgaagtcccccttcaaggagcagcattgctcactcaaacctgctgaaaagatg 373 || | ||||||||||||||||||| ||||||||||||||||||||||||||||||| ||| Sbjct: 505 atgtccatgaagtcccccttcaagaagcagcattgctcactcaaacctgctgaaaaaatg 446 Query: 374 tgctcct 380 |||||| Sbjct: 445 agctcct 439 Score = 40.1 bits (20), Expect = 0.35 Identities = 26/28 (92%) Strand = Plus / Minus Query: 456 ccttgccccttgagacatggtagtcatt 483 ||||||||||||||| ||||||||||| Sbjct: 441 ccttgccccttgagatgtggtagtcatt 414 >gi|78121085|gb|DV539469.1|DV539469 ZM_BFb0233F10.f ZM_BFb Zea mays cDNA 3', mRNA sequence Length = 780 Score = 230 bits (116), Expect = 2e-58 Identities = 146/156 (93%) Strand = Plus / Plus Query: 1 acggatgtcaggcaggccatcgccaagctcaatctcagccttggtggtcaaatgcttagc 60 |||||||||||| |||||||| || |||||||||||||||||| ||| ||||||||| || Sbjct: 594 acggatgtcaggtaggccatcaccgagctcaatctcagccttgatggccaaatgcttggc 653 Query: 61 gttgttgggatcaaataggtcagtcaggcaccattcatccagtgcaaaatactgcccagg 120 |||||||||||||||| |||| |||| ||||||||||||||||||||||||||||||||| Sbjct: 654 gttgttgggatcaaatcggtcggtcaagcaccattcatccagtgcaaaatactgcccagg 713 Query: 121 tttcagcacacggtagacctcactatagacaccttg 156 |||||||||||||||||||||||||||||| ||||| Sbjct: 714 tttcagcacacggtagacctcactatagacgccttg 749 Score = 40.1 bits (20), Expect = 0.35 Identities = 23/24 (95%) Strand = Plus / Plus Query: 254 ggtgcataacatgtagcctgtatt 277 ||||||| |||||||||||||||| Sbjct: 757 ggtgcatgacatgtagcctgtatt 780 >gi|78104569|gb|DV522987.1|DV522987 ZM_BFb0209A03.r ZM_BFb Zea mays cDNA 5', mRNA sequence Length = 864 Score = 224 bits (113), Expect = 1e-56 Identities = 145/156 (92%) Strand = Plus / Minus Query: 1 acggatgtcaggcaggccatcgccaagctcaatctcagccttggtggtcaaatgcttagc 60 |||||||||||| |||||||| || |||||||||||||||||| ||| ||||||||| || Sbjct: 811 acggatgtcaggtaggccatcaccgagctcaatctcagccttgatggccaaatgcttggc 752 Query: 61 gttgttgggatcaaataggtcagtcaggcaccattcatccagtgcaaaatactgcccagg 120 |||||||||||||||| |||| |||| |||||||||||||||||||||||||||| |||| Sbjct: 751 gttgttgggatcaaatcggtcggtcaagcaccattcatccagtgcaaaatactgcncagg 692 Query: 121 tttcagcacacggtagacctcactatagacaccttg 156 |||||||||||||||||||||||||||||| ||||| Sbjct: 691 tttcagcacacggtagacctcactatagacgccttg 656 Score = 188 bits (95), Expect = 6e-46 Identities = 119/127 (93%) Strand = Plus / Minus Query: 254 ggtgcataacatgtagcctgtattgcataggccgcatcaaaggtattatcagctattggc 313 ||||||| |||||||||||||||||||||||||||||||||||| ||||||| ||||||| Sbjct: 648 ggtgcatgacatgtagcctgtattgcataggccgcatcaaaggtgttatcagatattggc 589 Query: 314 atattcatgaagtcccccttcaaggagcagcattgctcactcaaacctgctgaaaagatg 373 || | ||||||||||||||||||| ||||||||||||||||||||||||||||||| ||| Sbjct: 588 atgtccatgaagtcccccttcaagaagcagcattgctcactcaaacctgctgaaaaaatg 529 Query: 374 tgctcct 380 |||||| Sbjct: 528 agctcct 522 Score = 40.1 bits (20), Expect = 0.35 Identities = 26/28 (92%) Strand = Plus / Minus Query: 456 ccttgccccttgagacatggtagtcatt 483 ||||||||||||||| ||||||||||| Sbjct: 524 ccttgccccttgagatgtggtagtcatt 497 >gi|78179966|gb|DV550339.1|DV550339 1000055-G08.GAD10-F UGI-Reseq Zea mays cDNA, mRNA sequence Length = 730 Score = 222 bits (112), Expect = 4e-56 Identities = 133/140 (95%) Strand = Plus / Minus Query: 17 ccatcgccaagctcaatctcagccttggtggtcaaatgcttagcgttgttgggatcaaat 76 ||||| || |||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 730 ccatcaccgagctcaatctcagccttggtggccaaatgcttagcgttgttgggatcaaat 671 Query: 77 aggtcagtcaggcaccattcatccagtgcaaaatactgcccaggtttcagcacacggtag 136 |||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 670 cggtcggtcaagcaccattcatccagtgcaaaatactgcccaggtttcagcacacggtag 611 Query: 137 acctcactatagacaccttg 156 |||||||||||||| ||||| Sbjct: 610 acctcactatagacgccttg 591 Score = 180 bits (91), Expect = 1e-43 Identities = 118/127 (92%) Strand = Plus / Minus Query: 254 ggtgcataacatgtagcctgtattgcataggccgcatcaaaggtattatcagctattggc 313 ||||||| |||||||||||||||||||||||||||||||||||| ||||||| ||||||| Sbjct: 583 ggtgcatgacatgtagcctgtattgcataggccgcatcaaaggtgttatcagatattggc 524 Query: 314 atattcatgaagtcccccttcaaggagcagcattgctcactcaaacctgctgaaaagatg 373 || | ||||||||||||||||||| ||||||||||||||||||||||||||||| | ||| Sbjct: 523 atgtccatgaagtcccccttcaagaagcagcattgctcactcaaacctgctgaagaaatg 464 Query: 374 tgctcct 380 |||||| Sbjct: 463 agctcct 457 Score = 40.1 bits (20), Expect = 0.35 Identities = 26/28 (92%) Strand = Plus / Minus Query: 456 ccttgccccttgagacatggtagtcatt 483 ||||||||||||||| ||||||||||| Sbjct: 459 ccttgccccttgagatgtggtagtcatt 432 >gi|76922985|gb|DV169277.1|DV169277 ZM_BFb0168E20.r ZM_BFb Zea mays cDNA 5', mRNA sequence Length = 837 Score = 214 bits (108), Expect = 1e-53 Identities = 144/156 (92%) Strand = Plus / Minus Query: 1 acggatgtcaggcaggccatcgccaagctcaatctcagccttggtggtcaaatgcttagc 60 |||||||||||| |||||||| || |||||||||||||||||| || ||||||||| || Sbjct: 833 acggatgtcaggtaggccatcaccgagctcaatctcagccttgatgcccaaatgcttggc 774 Query: 61 gttgttgggatcaaataggtcagtcaggcaccattcatccagtgcaaaatactgcccagg 120 ||||| |||||||||| |||| |||| ||||||||||||||||||||||||||||||||| Sbjct: 773 gttgtggggatcaaatcggtcggtcaagcaccattcatccagtgcaaaatactgcccagg 714 Query: 121 tttcagcacacggtagacctcactatagacaccttg 156 |||||||||||||||||||||||||||||| ||||| Sbjct: 713 tttcagcacacggtagacctcactatagacgccttg 678 Score = 188 bits (95), Expect = 6e-46 Identities = 119/127 (93%) Strand = Plus / Minus Query: 254 ggtgcataacatgtagcctgtattgcataggccgcatcaaaggtattatcagctattggc 313 ||||||| |||||||||||||||||||||||||||||||||||| ||||||| ||||||| Sbjct: 670 ggtgcatgacatgtagcctgtattgcataggccgcatcaaaggtgttatcagatattggc 611 Query: 314 atattcatgaagtcccccttcaaggagcagcattgctcactcaaacctgctgaaaagatg 373 || | ||||||||||||||||||| ||||||||||||||||||||||||||||||| ||| Sbjct: 610 atgtccatgaagtcccccttcaagaagcagcattgctcactcaaacctgctgaaaaaatg 551 Query: 374 tgctcct 380 |||||| Sbjct: 550 agctcct 544 Score = 40.1 bits (20), Expect = 0.35 Identities = 26/28 (92%) Strand = Plus / Minus Query: 456 ccttgccccttgagacatggtagtcatt 483 ||||||||||||||| ||||||||||| Sbjct: 546 ccttgccccttgagatgtggtagtcatt 519 >gi|78085881|gb|DV514274.1|DV514274 ZM_BFb0196C24.r ZM_BFb Zea mays cDNA 5', mRNA sequence Length = 835 Score = 214 bits (108), Expect = 1e-53 Identities = 145/156 (92%), Gaps = 1/156 (0%) Strand = Plus / Minus Query: 1 acggatgtcaggcaggccatcgccaagctcaatctcagccttggtggtcaaatgcttagc 60 |||||||||||| |||||||| || |||||||||||||||||| ||| ||||||||| || Sbjct: 831 acggatgtcaggtaggccatcaccgagctcaatctcagccttgatggccaaatgcttggc 772 Query: 61 gttgttgggatcaaataggtcagtcaggcaccattcatccagtgcaaaatactgcccagg 120 || ||||||||||||| |||| |||| ||||||||||||||||||||||||||||||||| Sbjct: 771 gt-gttgggatcaaatcggtcggtcaagcaccattcatccagtgcaaaatactgcccagg 713 Query: 121 tttcagcacacggtagacctcactatagacaccttg 156 |||||||||||||||||||||||||||||| ||||| Sbjct: 712 tttcagcacacggtagacctcactatagacgccttg 677 Score = 188 bits (95), Expect = 6e-46 Identities = 119/127 (93%) Strand = Plus / Minus Query: 254 ggtgcataacatgtagcctgtattgcataggccgcatcaaaggtattatcagctattggc 313 ||||||| |||||||||||||||||||||||||||||||||||| ||||||| ||||||| Sbjct: 669 ggtgcatgacatgtagcctgtattgcataggccgcatcaaaggtgttatcagatattggc 610 Query: 314 atattcatgaagtcccccttcaaggagcagcattgctcactcaaacctgctgaaaagatg 373 || | ||||||||||||||||||| ||||||||||||||||||||||||||||||| ||| Sbjct: 609 atgtccatgaagtcccccttcaagaagcagcattgctcactcaaacctgctgaaaaaatg 550 Query: 374 tgctcct 380 |||||| Sbjct: 549 agctcct 543 Score = 40.1 bits (20), Expect = 0.35 Identities = 26/28 (92%) Strand = Plus / Minus Query: 456 ccttgccccttgagacatggtagtcatt 483 ||||||||||||||| ||||||||||| Sbjct: 545 ccttgccccttgagatgtggtagtcatt 518 >gi|78105475|gb|DV523893.1|DV523893 ZM_BFb0210F06.r ZM_BFb Zea mays cDNA 5', mRNA sequence Length = 831 Score = 210 bits (106), Expect = 2e-52 Identities = 138/149 (92%) Strand = Plus / Minus Query: 8 tcaggcaggccatcgccaagctcaatctcagccttggtggtcaaatgcttagcgttgttg 67 ||||| |||||||| | |||||||||||||||||| ||| ||||||||| ||||||||| Sbjct: 831 tcaggtaggccatcacgnagctcaatctcagccttgatggccaaatgcttggcgttgttg 772 Query: 68 ggatcaaataggtcagtcaggcaccattcatccagtgcaaaatactgcccaggtttcagc 127 ||||||||| |||| |||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 771 ggatcaaatcggtcggtcaagcaccattcatccagtgcaaaatactgcccaggtttcagc 712 Query: 128 acacggtagacctcactatagacaccttg 156 ||||||||||||||||||||||| ||||| Sbjct: 711 acacggtagacctcactatagacgccttg 683 Score = 188 bits (95), Expect = 6e-46 Identities = 119/127 (93%) Strand = Plus / Minus Query: 254 ggtgcataacatgtagcctgtattgcataggccgcatcaaaggtattatcagctattggc 313 ||||||| |||||||||||||||||||||||||||||||||||| ||||||| ||||||| Sbjct: 675 ggtgcatgacatgtagcctgtattgcataggccgcatcaaaggtgttatcagatattggc 616 Query: 314 atattcatgaagtcccccttcaaggagcagcattgctcactcaaacctgctgaaaagatg 373 || | ||||||||||||||||||| ||||||||||||||||||||||||||||||| ||| Sbjct: 615 atgtccatgaagtcccccttcaagaagcagcattgctcactcaaacctgctgaaaaaatg 556 Query: 374 tgctcct 380 |||||| Sbjct: 555 agctcct 549 Score = 40.1 bits (20), Expect = 0.35 Identities = 26/28 (92%) Strand = Plus / Minus Query: 456 ccttgccccttgagacatggtagtcatt 483 ||||||||||||||| ||||||||||| Sbjct: 551 ccttgccccttgagatgtggtagtcatt 524 >gi|32930470|gb|CF035282.1|CF035282 QCG16d05.yg QCG Zea mays cDNA clone QCG16d05, mRNA sequence Length = 483 Score = 198 bits (100), Expect = 6e-49 Identities = 118/127 (92%) Strand = Plus / Minus Query: 387 aaaaattaaatggtgcatatccatatgctatacagtttttgtgttccaaaaagaagncta 446 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 483 aaaaattaaatggtgcatatccatatgctatacagtttttgtgttccaaaaagaaggcta 424 Query: 447 aaatgcaaaccttgccccttgagacatggtagtcattnnngntcaatccagnnattgnng 506 ||||||||||||||||||||||||||||||||||||| | ||||||||| |||| | Sbjct: 423 aaatgcaaaccttgccccttgagacatggtagtcattgttggtcaatccagttattgaag 364 Query: 507 ttgagct 513 ||||||| Sbjct: 363 ttgagct 357 >gi|71447574|gb|DR828624.1|DR828624 ZM_BFb0073L05.r ZM_BFb Zea mays cDNA 5', mRNA sequence Length = 785 Score = 188 bits (95), Expect = 6e-46 Identities = 119/127 (93%) Strand = Plus / Minus Query: 254 ggtgcataacatgtagcctgtattgcataggccgcatcaaaggtattatcagctattggc 313 ||||||| |||||||||||||||||||||||||||||||||||| ||||||| ||||||| Sbjct: 682 ggtgcatgacatgtagcctgtattgcataggccgcatcaaaggtgttatcagatattggc 623 Query: 314 atattcatgaagtcccccttcaaggagcagcattgctcactcaaacctgctgaaaagatg 373 || | ||||||||||||||||||| ||||||||||||||||||||||||||||||| ||| Sbjct: 622 atgtccatgaagtcccccttcaagaagcagcattgctcactcaaacctgctgaaaaaatg 563 Query: 374 tgctcct 380 |||||| Sbjct: 562 agctcct 556 Score = 159 bits (80), Expect = 5e-37 Identities = 92/96 (95%) Strand = Plus / Minus Query: 61 gttgttgggatcaaataggtcagtcaggcaccattcatccagtgcaaaatactgcccagg 120 |||||||||||||||| |||| |||| ||||||||||||||||||||||||||||||||| Sbjct: 785 gttgttgggatcaaatcggtcggtcaagcaccattcatccagtgcaaaatactgcccagg 726 Query: 121 tttcagcacacggtagacctcactatagacaccttg 156 |||||||||||||||||||||||||||||| ||||| Sbjct: 725 tttcagcacacggtagacctcactatagacgccttg 690 Score = 40.1 bits (20), Expect = 0.35 Identities = 26/28 (92%) Strand = Plus / Minus Query: 456 ccttgccccttgagacatggtagtcatt 483 ||||||||||||||| ||||||||||| Sbjct: 558 ccttgccccttgagatgtggtagtcatt 531 >gi|78107302|gb|DV525720.1|DV525720 ZM_BFb0213A16.f ZM_BFb Zea mays cDNA 3', mRNA sequence Length = 730 Score = 188 bits (95), Expect = 6e-46 Identities = 122/131 (93%) Strand = Plus / Plus Query: 1 acggatgtcaggcaggccatcgccaagctcaatctcagccttggtggtcaaatgcttagc 60 |||||||||||| |||||||| || |||||||||||||||||| ||| ||||||||| || Sbjct: 600 acggatgtcaggtaggccatcaccgagctcaatctcagccttgatggccaaatgcttggc 659 Query: 61 gttgttgggatcaaataggtcagtcaggcaccattcatccagtgcaaaatactgcccagg 120 |||||||||||||||| |||| |||| ||||||||||||||||||||||||||||||||| Sbjct: 660 gttgttgggatcaaatcggtcggtcaagcaccattcatccagtgcaaaatactgcccagg 719 Query: 121 tttcagcacac 131 ||||||||||| Sbjct: 720 tttcagcacac 730 >gi|78107303|gb|DV525721.1|DV525721 ZM_BFb0213A16.r ZM_BFb Zea mays cDNA 5', mRNA sequence Length = 833 Score = 188 bits (95), Expect = 6e-46 Identities = 119/127 (93%) Strand = Plus / Minus Query: 254 ggtgcataacatgtagcctgtattgcataggccgcatcaaaggtattatcagctattggc 313 ||||||| |||||||||||||||||||||||||||||||||||| ||||||| ||||||| Sbjct: 706 ggtgcatgacatgtagcctgtattgcataggccgcatcaaaggtgttatcagatattggc 647 Query: 314 atattcatgaagtcccccttcaaggagcagcattgctcactcaaacctgctgaaaagatg 373 || | ||||||||||||||||||| ||||||||||||||||||||||||||||||| ||| Sbjct: 646 atgtccatgaagtcccccttcaagaagcagcattgctcactcaaacctgctgaaaaaatg 587 Query: 374 tgctcct 380 |||||| Sbjct: 586 agctcct 580 Score = 174 bits (88), Expect = 9e-42 Identities = 112/120 (93%) Strand = Plus / Minus Query: 37 agccttggtggtcaaatgcttagcgttgttgggatcaaataggtcagtcaggcaccattc 96 ||||||| ||| |||||||| |||||||||||||||||| |||| |||| ||||||||| Sbjct: 833 agccttgatggccaaatgctgggcgttgttgggatcaaatcggtcggtcaagcaccattc 774 Query: 97 atccagtgcaaaatactgcccaggtttcagcacacggtagacctcactatagacaccttg 156 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 773 atccagtgcaaaatactgcccaggtttcagcacacggtagacctcactatagacgccttg 714 Score = 40.1 bits (20), Expect = 0.35 Identities = 26/28 (92%) Strand = Plus / Minus Query: 456 ccttgccccttgagacatggtagtcatt 483 ||||||||||||||| ||||||||||| Sbjct: 582 ccttgccccttgagatgtggtagtcatt 555 >gi|88757246|gb|DY541387.1|DY541387 ZM_BFb0366F11.r ZM_BFb Zea mays cDNA 5', mRNA sequence Length = 677 Score = 184 bits (93), Expect = 1e-44 Identities = 117/125 (93%) Strand = Plus / Minus Query: 256 tgcataacatgtagcctgtattgcataggccgcatcaaaggtattatcagctattggcat 315 ||||| |||||||||||||||||||||||||||||||||||| ||||||| ||||||||| Sbjct: 677 tgcatgacatgtagcctgtattgcataggccgcatcaaaggtgttatcagatattggcat 618 Query: 316 attcatgaagtcccccttcaaggagcagcattgctcactcaaacctgctgaaaagatgtg 375 | ||||||||||||||||||| ||||||||||||||||||||||||||||||| ||| | Sbjct: 617 gtccatgaagtcccccttcaagaagcagcattgctcactcaaacctgctgaaaaaatgag 558 Query: 376 ctcct 380 ||||| Sbjct: 557 ctcct 553 Score = 40.1 bits (20), Expect = 0.35 Identities = 26/28 (92%) Strand = Plus / Minus Query: 456 ccttgccccttgagacatggtagtcatt 483 ||||||||||||||| ||||||||||| Sbjct: 555 ccttgccccttgagatgtggtagtcatt 528 >gi|6860033|gb|AW356027.1|AW356027 707018H11.x1 707 - Mixed adult tissues from Walbot lab (SK) Zea mays cDNA, mRNA sequence Length = 618 Score = 180 bits (91), Expect = 1e-43 Identities = 118/127 (92%) Strand = Plus / Minus Query: 254 ggtgcataacatgtagcctgtattgcataggccgcatcaaaggtattatcagctattggc 313 ||||||| |||||||||||||||||||||||||||||||||||| ||||||| ||||||| Sbjct: 572 ggtgcatgacatgtagcctgtattgcataggccgcatcaaaggtgttatcagatattggc 513 Query: 314 atattcatgaagtcccccttcaaggagcagcattgctcactcaaacctgctgaaaagatg 373 || | ||||||||||||||||||| ||||||||||||||||||||||||||||| | ||| Sbjct: 512 atgtccatgaagtcccccttcaagaagcagcattgctcactcaaacctgctgaagaaatg 453 Query: 374 tgctcct 380 |||||| Sbjct: 452 agctcct 446 Score = 69.9 bits (35), Expect = 4e-10 Identities = 38/39 (97%) Strand = Plus / Minus Query: 118 aggtttcagcacacggtagacctcactatagacaccttg 156 ||||||||||||||||||||||||||||||||| ||||| Sbjct: 618 aggtttcagcacacggtagacctcactatagacgccttg 580 Score = 40.1 bits (20), Expect = 0.35 Identities = 26/28 (92%) Strand = Plus / Minus Query: 456 ccttgccccttgagacatggtagtcatt 483 ||||||||||||||| ||||||||||| Sbjct: 448 ccttgccccttgagatgtggtagtcatt 421 >gi|78105474|gb|DV523892.1|DV523892 ZM_BFb0210F06.f ZM_BFb Zea mays cDNA 3', mRNA sequence Length = 724 Score = 180 bits (91), Expect = 1e-43 Identities = 121/131 (92%) Strand = Plus / Plus Query: 1 acggatgtcaggcaggccatcgccaagctcaatctcagccttggtggtcaaatgcttagc 60 |||||||||||| |||||||| || |||||||||||||||||| ||| ||||||||| || Sbjct: 594 acggatgtcagggaggccatcaccgagctcaatctcagccttgatggccaaatgcttggc 653 Query: 61 gttgttgggatcaaataggtcagtcaggcaccattcatccagtgcaaaatactgcccagg 120 |||||||||||||||| |||| | || ||||||||||||||||||||||||||||||||| Sbjct: 654 gttgttgggatcaaatcggtcgggcaagcaccattcatccagtgcaaaatactgcccagg 713 Query: 121 tttcagcacac 131 ||||||||||| Sbjct: 714 tttcagcacac 724 >gi|12045841|gb|BF727980.1|BF727980 1000055G08.x3 1000 - Unigene I from Maize Genome Project Zea mays cDNA, mRNA sequence Length = 576 Score = 172 bits (87), Expect = 4e-41 Identities = 117/127 (92%) Strand = Plus / Minus Query: 254 ggtgcataacatgtagcctgtattgcataggccgcatcaaaggtattatcagctattggc 313 ||||||| |||||||||||||||||||||||||||||||||||| ||||||| ||||||| Sbjct: 554 ggtgcatgacatgtagcctgtattgcataggccgcatcaaaggtgttatcagatattggc 495 Query: 314 atattcatgaagtcccccttcaaggagcagcattgctcactcaaacctgctgaaaagatg 373 || | ||||||||||||||||||| ||||||||||||| ||||||||||||||| | ||| Sbjct: 494 atgtccatgaagtcccccttcaagaagcagcattgctcgctcaaacctgctgaagaaatg 435 Query: 374 tgctcct 380 |||||| Sbjct: 434 agctcct 428 >gi|78121086|gb|DV539470.1|DV539470 ZM_BFb0233F10.r ZM_BFb Zea mays cDNA 5', mRNA sequence Length = 694 Score = 165 bits (83), Expect = 9e-39 Identities = 110/119 (92%) Strand = Plus / Minus Query: 262 acatgtagcctgtattgcataggccgcatcaaaggtattatcagctattggcatattcat 321 |||||||||||||||||||||||||||||||||||| ||||||| ||||||||| | || Sbjct: 666 acatgtagcctgtattgcataggccgcatcaaaggtgttatcagatattggcatgtccac 607 Query: 322 gaagtcccccttcaaggagcagcattgctcactcaaacctgctgaaaagatgtgctcct 380 |||||||||| ||||| ||||||||||||||||||||||||||||||| ||| |||||| Sbjct: 606 gaagtcccccctcaagaagcagcattgctcactcaaacctgctgaaaaaatgagctcct 548 >gi|60396680|gb|DN229548.1|DN229548 MEST1065_B06.T7-1 UGA-ZmSAM-XZ2 Zea mays cDNA, mRNA sequence Length = 711 Score = 159 bits (80), Expect = 5e-37 Identities = 107/116 (92%) Strand = Plus / Plus Query: 1 acggatgtcaggcaggccatcgccaagctcaatctcagccttggtggtcaaatgcttagc 60 |||||||||||| |||||||| || |||||||||||||||||| ||| ||||||||| || Sbjct: 596 acggatgtcaggtaggccatcaccgagctcaatctcagccttgatggccaaatgcttggc 655 Query: 61 gttgttgggatcaaataggtcagtcaggcaccattcatccagtgcaaaatactgcc 116 |||||||||||||||| |||| |||| ||||||||||||||||||||||||||||| Sbjct: 656 gttgttgggatcaaatcggtcggtcaagcaccattcatccagtgcaaaatactgcc 711 >gi|67021905|gb|CO450654.1|CO450654 MZCCL10154B07.g Maize Endosperm cDNA Library Zea mays cDNA, mRNA sequence Length = 734 Score = 139 bits (70), Expect = 5e-31 Identities = 100/110 (90%) Strand = Plus / Minus Query: 1 acggatgtcaggcaggccatcgccaagctcaatctcagccttggtggtcaaatgcttagc 60 |||||||||||| |||||||| || |||||||||||||||||| ||| ||||||||| || Sbjct: 141 acggatgtcaggtaggccatcaccgagctcaatctcagccttgatggccaaatgcttggc 82 Query: 61 gttgttgggatcaaataggtcagtcaggcaccattcatccagtgcaaaat 110 |||||||||||||||| |||| |||| ||||||||||||||| ||||||| Sbjct: 81 gttgttgggatcaaatcggtcggtcaagcaccattcatccagagcaaaat 32 >gi|29577003|gb|CB617115.1|CB617115 3529_1_69_1_A11.y_1 3529 - 2 mm ear tissue from Schmidt and Hake labs Zea mays cDNA, mRNA sequence Length = 623 Score = 111 bits (56), Expect = 1e-22 Identities = 74/80 (92%) Strand = Plus / Minus Query: 301 atcagctattggcatattcatgaagtcccccttcaaggagcagcattgctcactcaaacc 360 ||||| ||||||||| | ||||||||||||||||||| |||||||||||||||||||||| Sbjct: 623 atcagatattggcatgtccatgaagtcccccttcaagaagcagcattgctcactcaaacc 564 Query: 361 tgctgaaaagatgtgctcct 380 ||||||||| ||| |||||| Sbjct: 563 tgctgaaaaaatgagctcct 544 Score = 40.1 bits (20), Expect = 0.35 Identities = 26/28 (92%) Strand = Plus / Minus Query: 456 ccttgccccttgagacatggtagtcatt 483 ||||||||||||||| ||||||||||| Sbjct: 546 ccttgccccttgagatgtggtagtcatt 519 >gi|86470680|gb|DY237050.1|DY237050 ZM_BFb0253O09.f ZM_BFb Zea mays cDNA 3', mRNA sequence Length = 674 Score = 93.7 bits (47), Expect = 3e-17 Identities = 68/75 (90%) Strand = Plus / Plus Query: 1 acggatgtcaggcaggccatcgccaagctcaatctcagccttggtggtcaaatgcttagc 60 |||||||||||| |||||||| || |||||||||||||||||| ||| ||||||||| || Sbjct: 600 acggatgtcaggtaggccatcaccgagctcaatctcagccttgatggccaaatgcttggc 659 Query: 61 gttgttgggatcaaa 75 | ||||||||||||| Sbjct: 660 ggtgttgggatcaaa 674 >gi|88757091|gb|DY541232.1|DY541232 ZM_BFb0366B13.r ZM_BFb Zea mays cDNA 5', mRNA sequence Length = 623 Score = 93.7 bits (47), Expect = 3e-17 Identities = 65/71 (91%) Strand = Plus / Minus Query: 310 tggcatattcatgaagtcccccttcaaggagcagcattgctcactcaaacctgctgaaaa 369 |||||| | |||||||||||| |||||| ||||||||||||||||||||||||||||||| Sbjct: 623 tggcatgtccatgaagtcccctttcaagaagcagcattgctcactcaaacctgctgaaaa 564 Query: 370 gatgtgctcct 380 ||| |||||| Sbjct: 563 aatgagctcct 553 Score = 40.1 bits (20), Expect = 0.35 Identities = 26/28 (92%) Strand = Plus / Minus Query: 456 ccttgccccttgagacatggtagtcatt 483 ||||||||||||||| ||||||||||| Sbjct: 555 ccttgccccttgagatgtggtagtcatt 528 >gi|76293535|gb|DV033103.1|DV033103 ZM_BFb0157C21.f ZM_BFb Zea mays cDNA 3', mRNA sequence Length = 678 Score = 91.7 bits (46), Expect = 1e-16 Identities = 64/70 (91%) Strand = Plus / Plus Query: 1 acggatgtcaggcaggccatcgccaagctcaatctcagccttggtggtcaaatgcttagc 60 |||||||||||| |||||||| || |||||||||||||||||| ||| ||||||||| || Sbjct: 609 acggatgtcaggtaggccatcaccgagctcaatctcagccttgatggccaaatgcttggc 668 Query: 61 gttgttggga 70 |||||||||| Sbjct: 669 gttgttggga 678 >gi|29544983|gb|CB605161.1|CB605161 3529_1_69_1_A11.x_1 3529 - 2 mm ear tissue from Schmidt and Hake labs Zea mays cDNA, mRNA sequence Length = 551 Score = 67.9 bits (34), Expect = 2e-09 Identities = 49/54 (90%) Strand = Plus / Plus Query: 1 acggatgtcaggcaggccatcgccaagctcaatctcagccttggtggtcaaatg 54 |||||||||||| |||||||| || |||||||||||||||||| ||| |||||| Sbjct: 498 acggatgtcaggtaggccatcaccgagctcaatctcagccttgatggccaaatg 551 >gi|6021519|gb|AW066447.1|AW066447 660014E06.y1 660 - Mixed stages of anther and pollen Zea mays cDNA, mRNA sequence Length = 581 Score = 42.1 bits (21), Expect = 0.088 Identities = 30/33 (90%) Strand = Plus / Minus Query: 11 ggcaggccatcgccaagctcaatctcagccttg 43 |||||||||| |||||||||||| ||| ||||| Sbjct: 300 ggcaggccattgccaagctcaatttcatccttg 268 >gi|6952458|gb|AW424526.1|AW424526 707017B01.y1 707 - Mixed adult tissues from Walbot lab (SK) Zea mays cDNA, mRNA sequence Length = 624 Score = 42.1 bits (21), Expect = 0.088 Identities = 30/33 (90%) Strand = Plus / Minus Query: 11 ggcaggccatcgccaagctcaatctcagccttg 43 |||||||||| |||||||||||| ||| ||||| Sbjct: 481 ggcaggccattgccaagctcaatttcatccttg 449 >gi|14204332|gb|BG838009.1|BG838009 Zm10_05f09_A Zm10_AAFC_ECORC_Fusarium_graminearum_corn_silk Zea mays cDNA clone Zm10_05f09, mRNA sequence Length = 1040 Score = 42.1 bits (21), Expect = 0.088 Identities = 30/33 (90%) Strand = Plus / Minus Query: 11 ggcaggccatcgccaagctcaatctcagccttg 43 |||||||||| |||||||||||| ||| ||||| Sbjct: 369 ggcaggccattgccaagctcaatttcatccttg 337 >gi|14204333|gb|BG838010.1|BG838010 Zm10_05e11_A Zm10_AAFC_ECORC_Fusarium_graminearum_corn_silk Zea mays cDNA clone Zm10_05e11, mRNA sequence Length = 1017 Score = 42.1 bits (21), Expect = 0.088 Identities = 30/33 (90%) Strand = Plus / Minus Query: 11 ggcaggccatcgccaagctcaatctcagccttg 43 |||||||||| |||||||||||| ||| ||||| Sbjct: 346 ggcaggccattgccaagctcaatttcatccttg 314 >gi|14208295|gb|BG841973.1|BG841973 MEST34-E12.T3 ISUM3-TL Zea mays cDNA clone MEST34-E12 3', mRNA sequence Length = 676 Score = 42.1 bits (21), Expect = 0.088 Identities = 30/33 (90%) Strand = Plus / Plus Query: 11 ggcaggccatcgccaagctcaatctcagccttg 43 |||||||||| |||||||||||| ||| ||||| Sbjct: 615 ggcaggccattgccaagctcaatttcatccttg 647 >gi|16918224|gb|BM073641.1|BM073641 MEST71-E10.T3 ISUM4-TN Zea mays cDNA clone MEST71-E10 3', mRNA sequence Length = 764 Score = 42.1 bits (21), Expect = 0.088 Identities = 30/33 (90%) Strand = Plus / Plus Query: 11 ggcaggccatcgccaagctcaatctcagccttg 43 |||||||||| |||||||||||| ||| ||||| Sbjct: 678 ggcaggccattgccaagctcaatttcatccttg 710 >gi|16925631|gb|BM078699.1|BM078699 MEST123-B11.T3 ISUM4-TN Zea mays cDNA clone MEST123-B11 3', mRNA sequence Length = 742 Score = 42.1 bits (21), Expect = 0.088 Identities = 30/33 (90%) Strand = Plus / Plus Query: 11 ggcaggccatcgccaagctcaatctcagccttg 43 |||||||||| |||||||||||| ||| ||||| Sbjct: 659 ggcaggccattgccaagctcaatttcatccttg 691 >gi|32847179|gb|CD986860.1|CD986860 QAN4a06.yg QAN Zea mays cDNA clone QAN4a06, mRNA sequence Length = 190 Score = 42.1 bits (21), Expect = 0.088 Identities = 30/33 (90%) Strand = Plus / Plus Query: 11 ggcaggccatcgccaagctcaatctcagccttg 43 |||||||||| |||||||||||| ||| ||||| Sbjct: 103 ggcaggccattgccaagctcaatttcatccttg 135 >gi|33102858|gb|CF062818.1|CF062818 QCU14a06.yg QCU Zea mays cDNA clone QCU14a06, mRNA sequence Length = 306 Score = 42.1 bits (21), Expect = 0.088 Identities = 30/33 (90%) Strand = Plus / Plus Query: 11 ggcaggccatcgccaagctcaatctcagccttg 43 |||||||||| |||||||||||| ||| ||||| Sbjct: 219 ggcaggccattgccaagctcaatttcatccttg 251 >gi|37395337|gb|CF634948.1|CF634948 zmrww00_0A20-004-h03.s4 zmrww00 Zea mays cDNA 3', mRNA sequence Length = 780 Score = 42.1 bits (21), Expect = 0.088 Identities = 30/33 (90%) Strand = Plus / Plus Query: 11 ggcaggccatcgccaagctcaatctcagccttg 43 |||||||||| |||||||||||| ||| ||||| Sbjct: 590 ggcaggccattgccaagctcaatttcatccttg 622 >gi|60346020|gb|DN212993.1|DN212993 MEST951_H12.T7-1 UGA-ZmSAM-XZ2 Zea mays cDNA, mRNA sequence Length = 717 Score = 42.1 bits (21), Expect = 0.088 Identities = 30/33 (90%) Strand = Plus / Plus Query: 11 ggcaggccatcgccaagctcaatctcagccttg 43 |||||||||| |||||||||||| ||| ||||| Sbjct: 680 ggcaggccattgccaagctcaatttcatccttg 712 >gi|60352650|gb|DN219623.1|DN219623 MEST1084_G04.T7-1 UGA-ZmSAM-XZ2 Zea mays cDNA, mRNA sequence Length = 719 Score = 42.1 bits (21), Expect = 0.088 Identities = 30/33 (90%) Strand = Plus / Minus Query: 11 ggcaggccatcgccaagctcaatctcagccttg 43 |||||||||| |||||||||||| ||| ||||| Sbjct: 681 ggcaggccattgccaagctcaatttcatccttg 649 >gi|60353870|gb|DN220843.1|DN220843 MEST1102_D10.T7-1 UGA-ZmSAM-XZ2 Zea mays cDNA, mRNA sequence Length = 734 Score = 42.1 bits (21), Expect = 0.088 Identities = 30/33 (90%) Strand = Plus / Plus Query: 11 ggcaggccatcgccaagctcaatctcagccttg 43 |||||||||| |||||||||||| ||| ||||| Sbjct: 617 ggcaggccattgccaagctcaatttcatccttg 649 >gi|60357761|gb|DN224734.1|DN224734 MEST1163_D03.T7-1 UGA-ZmSAM-XZ2 Zea mays cDNA, mRNA sequence Length = 766 Score = 42.1 bits (21), Expect = 0.088 Identities = 30/33 (90%) Strand = Plus / Plus Query: 11 ggcaggccatcgccaagctcaatctcagccttg 43 |||||||||| |||||||||||| ||| ||||| Sbjct: 711 ggcaggccattgccaagctcaatttcatccttg 743 >gi|60396969|gb|DN229788.1|DN229788 MEST1016_D03.T7-1 UGA-ZmSAM-XZ2 Zea mays cDNA, mRNA sequence Length = 727 Score = 42.1 bits (21), Expect = 0.088 Identities = 30/33 (90%) Strand = Plus / Plus Query: 11 ggcaggccatcgccaagctcaatctcagccttg 43 |||||||||| |||||||||||| ||| ||||| Sbjct: 659 ggcaggccattgccaagctcaatttcatccttg 691 >gi|67013084|gb|CO441833.1|CO441833 MZCCL10020D10.g Maize Endosperm cDNA Library Zea mays cDNA, mRNA sequence Length = 807 Score = 42.1 bits (21), Expect = 0.088 Identities = 30/33 (90%) Strand = Plus / Minus Query: 11 ggcaggccatcgccaagctcaatctcagccttg 43 |||||||||| |||||||||||| ||| ||||| Sbjct: 530 ggcaggccattgccaagctcaatttcatccttg 498 >gi|67014880|gb|CO443629.1|CO443629 MZCCL10047G01.g Maize Endosperm cDNA Library Zea mays cDNA, mRNA sequence Length = 795 Score = 42.1 bits (21), Expect = 0.088 Identities = 30/33 (90%) Strand = Plus / Minus Query: 11 ggcaggccatcgccaagctcaatctcagccttg 43 |||||||||| |||||||||||| ||| ||||| Sbjct: 229 ggcaggccattgccaagctcaatttcatccttg 197 >gi|67020577|gb|CO449326.1|CO449326 MZCCL10128A08.g Maize Endosperm cDNA Library Zea mays cDNA, mRNA sequence Length = 786 Score = 42.1 bits (21), Expect = 0.088 Identities = 30/33 (90%) Strand = Plus / Minus Query: 11 ggcaggccatcgccaagctcaatctcagccttg 43 |||||||||| |||||||||||| ||| ||||| Sbjct: 513 ggcaggccattgccaagctcaatttcatccttg 481 >gi|67033428|gb|CO462177.1|CO462177 MZCCS20027H12.g Maize Endosperm cDNA Library Zea mays cDNA, mRNA sequence Length = 760 Score = 42.1 bits (21), Expect = 0.088 Identities = 30/33 (90%) Strand = Plus / Minus Query: 11 ggcaggccatcgccaagctcaatctcagccttg 43 |||||||||| |||||||||||| ||| ||||| Sbjct: 431 ggcaggccattgccaagctcaatgtcatccttg 399 >gi|67041438|gb|CO467693.1|CO467693 MZCCL10215C04.g Maize Endosperm cDNA Library Zea mays cDNA, mRNA sequence Length = 737 Score = 42.1 bits (21), Expect = 0.088 Identities = 30/33 (90%) Strand = Plus / Minus Query: 11 ggcaggccatcgccaagctcaatctcagccttg 43 |||||||||| |||||||||||| ||| ||||| Sbjct: 376 ggcaggccattgccaagctcaatttcatccttg 344 >gi|78025715|gb|DV494102.1|DV494102 1000210-B11.T7-1 UGI-Reseq Zea mays cDNA, mRNA sequence Length = 707 Score = 42.1 bits (21), Expect = 0.088 Identities = 30/33 (90%) Strand = Plus / Plus Query: 11 ggcaggccatcgccaagctcaatctcagccttg 43 |||||||||| |||||||||||| ||| ||||| Sbjct: 668 ggcaggccattgccaagctcaatttcatccttg 700 >gi|78116694|gb|DV535081.1|DV535081 ZM_BFb0226P06.f ZM_BFb Zea mays cDNA 3', mRNA sequence Length = 654 Score = 42.1 bits (21), Expect = 0.088 Identities = 30/33 (90%) Strand = Plus / Plus Query: 11 ggcaggccatcgccaagctcaatctcagccttg 43 |||||||||| |||||||||||| ||| ||||| Sbjct: 584 ggcaggccattgccaagctcaatttcatccttg 616 >gi|1899059|gb|U79669.1|ZMU79669 Zea mays endosperm C-24 sterol methyltransferase (ESMT1) mRNA, complete cds Length = 1383 Score = 42.1 bits (21), Expect = 0.088 Identities = 30/33 (90%) Strand = Plus / Minus Query: 11 ggcaggccatcgccaagctcaatctcagccttg 43 |||||||||| |||||||||||| ||| ||||| Sbjct: 775 ggcaggccattgccaagctcaatttcatccttg 743 >gi|2909845|gb|AF045570.1|AF045570 Zea mays (S)-adenosyl-L-methionine:delta 24-sterol methyltransferase mRNA, complete cds Length = 1497 Score = 42.1 bits (21), Expect = 0.088 Identities = 30/33 (90%) Strand = Plus / Minus Query: 11 ggcaggccatcgccaagctcaatctcagccttg 43 |||||||||| |||||||||||| ||| ||||| Sbjct: 763 ggcaggccattgccaagctcaatttcatccttg 731 >gi|21206734|gb|AY103656.1| Zea mays PCO072714 mRNA sequence Length = 1665 Score = 42.1 bits (21), Expect = 0.088 Identities = 30/33 (90%) Strand = Plus / Minus Query: 11 ggcaggccatcgccaagctcaatctcagccttg 43 |||||||||| |||||||||||| ||| ||||| Sbjct: 938 ggcaggccattgccaagctcaatttcatccttg 906 >gi|1899059|gb|U79669.1|ZMU79669 Zea mays endosperm C-24 sterol methyltransferase (ESMT1) mRNA, complete cds Length = 1383 Score = 42.1 bits (21), Expect = 0.088 Identities = 30/33 (90%) Strand = Plus / Minus Query: 11 ggcaggccatcgccaagctcaatctcagccttg 43 |||||||||| |||||||||||| ||| ||||| Sbjct: 775 ggcaggccattgccaagctcaatttcatccttg 743 >gi|21206734|gb|AY103656.1| Zea mays PCO072714 mRNA sequence Length = 1665 Score = 42.1 bits (21), Expect = 0.088 Identities = 30/33 (90%) Strand = Plus / Minus Query: 11 ggcaggccatcgccaagctcaatctcagccttg 43 |||||||||| |||||||||||| ||| ||||| Sbjct: 938 ggcaggccattgccaagctcaatttcatccttg 906 >gi|2909845|gb|AF045570.1|AF045570 Zea mays (S)-adenosyl-L-methionine:delta 24-sterol methyltransferase mRNA, complete cds Length = 1497 Score = 42.1 bits (21), Expect = 0.088 Identities = 30/33 (90%) Strand = Plus / Minus Query: 11 ggcaggccatcgccaagctcaatctcagccttg 43 |||||||||| |||||||||||| ||| ||||| Sbjct: 763 ggcaggccattgccaagctcaatttcatccttg 731 >gi|5670853|gb|AI932116.1|AI932116 618021B03.x1 618 - Inbred Tassel cDNA Library Zea mays cDNA, mRNA sequence Length = 437 Score = 38.2 bits (19), Expect = 1.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 553 atatatatatgctcttcat 571 ||||||||||||||||||| Sbjct: 246 atatatatatgctcttcat 264 >gi|14206629|gb|BG840307.1|BG840307 MEST9-E08.T7-1 ISUM4-TN Zea mays cDNA clone MEST9-E08 5', mRNA sequence Length = 547 Score = 38.2 bits (19), Expect = 1.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 553 atatatatatgctcttcat 571 ||||||||||||||||||| Sbjct: 141 atatatatatgctcttcat 123 >gi|14245139|gb|BG873721.1|BG873721 MEST9-E08.T3 ISUM4-TN Zea mays cDNA clone MEST9-E08 3', mRNA sequence Length = 647 Score = 38.2 bits (19), Expect = 1.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 553 atatatatatgctcttcat 571 ||||||||||||||||||| Sbjct: 506 atatatatatgctcttcat 524 >gi|21987920|gb|BQ779448.1|BQ779448 946120E08.x1 946 - tassel primordium prepared by Schmidt lab Zea mays cDNA, mRNA sequence Length = 336 Score = 38.2 bits (19), Expect = 1.4 Identities = 22/23 (95%) Strand = Plus / Plus Query: 11 ggcaggccatcgccaagctcaat 33 |||||||||| |||||||||||| Sbjct: 306 ggcaggccattgccaagctcaat 328 >gi|30087747|gb|CB885953.1|CB885953 3529_1_91_1_C03.x_1 3529 - 2 mm ear tissue from Schmidt and Hake labs Zea mays cDNA, mRNA sequence Length = 529 Score = 38.2 bits (19), Expect = 1.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 553 atatatatatgctcttcat 571 ||||||||||||||||||| Sbjct: 372 atatatatatgctcttcat 390 >gi|60347708|gb|DN214681.1|DN214681 MEST888_F01.T7-1 UGA-ZmSAM-XZ2 Zea mays cDNA, mRNA sequence Length = 682 Score = 38.2 bits (19), Expect = 1.4 Identities = 22/23 (95%) Strand = Plus / Plus Query: 11 ggcaggccatcgccaagctcaat 33 |||||||||| |||||||||||| Sbjct: 643 ggcaggccattgccaagctcaat 665 >gi|67037362|gb|CO464202.1|CO464202 MZCCL15044B07.g Maize Endosperm cDNA Library Zea mays cDNA, mRNA sequence Length = 865 Score = 38.2 bits (19), Expect = 1.4 Identities = 28/31 (90%) Strand = Plus / Minus Query: 13 caggccatcgccaagctcaatctcagccttg 43 |||||||| |||||||||||| ||| ||||| Sbjct: 863 caggccattgccaagctcaatttcatccttg 833 >gi|76930457|gb|DV172392.1|DV172392 ZM_BFb0173P06.r ZM_BFb Zea mays cDNA 5', mRNA sequence Length = 679 Score = 38.2 bits (19), Expect = 1.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 553 atatatatatgctcttcat 571 ||||||||||||||||||| Sbjct: 370 atatatatatgctcttcat 388 >gi|78026210|gb|DV494597.1|DV494597 1000202-C09.T7-1 UGI-Reseq Zea mays cDNA, mRNA sequence Length = 377 Score = 38.2 bits (19), Expect = 1.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 553 atatatatatgctcttcat 571 ||||||||||||||||||| Sbjct: 269 atatatatatgctcttcat 287 >gi|78027335|gb|DV495722.1|DV495722 1000202-C08.T7-1 UGI-Reseq Zea mays cDNA, mRNA sequence Length = 557 Score = 38.2 bits (19), Expect = 1.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 553 atatatatatgctcttcat 571 ||||||||||||||||||| Sbjct: 366 atatatatatgctcttcat 384 >gi|78073795|gb|DV502229.1|DV502229 ZM_BFb0173P06.f ZM_BFb Zea mays cDNA 3', mRNA sequence Length = 679 Score = 38.2 bits (19), Expect = 1.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 553 atatatatatgctcttcat 571 ||||||||||||||||||| Sbjct: 370 atatatatatgctcttcat 388 >gi|63093209|emb|CS078241.1| Sequence 85 from Patent WO2005035769 Length = 1738 Score = 38.2 bits (19), Expect = 1.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 553 atatatatatgctcttcat 571 ||||||||||||||||||| Sbjct: 1255 atatatatatgctcttcat 1237 >gi|47081123|gb|BV145020.1| PZA02483-76643-W22_R-scm2 Zea mays W22_R-scm2 Zea mays STS genomic, sequence tagged site Length = 270 Score = 38.2 bits (19), Expect = 1.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 553 atatatatatgctcttcat 571 ||||||||||||||||||| Sbjct: 110 atatatatatgctcttcat 128 >gi|47081122|gb|BV145019.1| PZA02483-76632-Tx501 Zea mays Tx501 Zea mays STS genomic, sequence tagged site Length = 250 Score = 38.2 bits (19), Expect = 1.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 553 atatatatatgctcttcat 571 ||||||||||||||||||| Sbjct: 90 atatatatatgctcttcat 108 >gi|47081121|gb|BV145018.1| PZA02483-76641-Tx303 Zea mays Tx303 Zea mays STS genomic, sequence tagged site Length = 266 Score = 38.2 bits (19), Expect = 1.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 553 atatatatatgctcttcat 571 ||||||||||||||||||| Sbjct: 88 atatatatatgctcttcat 106 >gi|47081120|gb|BV145017.1| PZA02483-76640-T218 Zea mays T218 Zea mays STS genomic, sequence tagged site Length = 262 Score = 38.2 bits (19), Expect = 1.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 553 atatatatatgctcttcat 571 ||||||||||||||||||| Sbjct: 103 atatatatatgctcttcat 121 >gi|47081119|gb|BV145016.1| PZA02483-76642-NC7A Zea mays NC7A Zea mays STS genomic, sequence tagged site Length = 265 Score = 38.2 bits (19), Expect = 1.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 553 atatatatatgctcttcat 571 ||||||||||||||||||| Sbjct: 102 atatatatatgctcttcat 120 >gi|47081118|gb|BV145015.1| PZA02483-76631-Mp708 Zea mays Mp708 Zea mays STS genomic, sequence tagged site Length = 262 Score = 38.2 bits (19), Expect = 1.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 553 atatatatatgctcttcat 571 ||||||||||||||||||| Sbjct: 103 atatatatatgctcttcat 121 >gi|47081117|gb|BV145014.1| PZA02483-76639-Mo17 Zea mays Mo17 Zea mays STS genomic, sequence tagged site Length = 260 Score = 38.2 bits (19), Expect = 1.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 553 atatatatatgctcttcat 571 ||||||||||||||||||| Sbjct: 103 atatatatatgctcttcat 121 >gi|47081116|gb|BV145013.1| PZA02483-76629-GT119 Zea mays GT119 Zea mays STS genomic, sequence tagged site Length = 265 Score = 38.2 bits (19), Expect = 1.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 553 atatatatatgctcttcat 571 ||||||||||||||||||| Sbjct: 103 atatatatatgctcttcat 121 >gi|47081115|gb|BV145012.1| PZA02483-76630-CO159 Zea mays CO159 Zea mays STS genomic, sequence tagged site Length = 290 Score = 38.2 bits (19), Expect = 1.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 553 atatatatatgctcttcat 571 ||||||||||||||||||| Sbjct: 105 atatatatatgctcttcat 123 >gi|47081114|gb|BV145011.1| PZA02483-76628-B73 Zea mays B73 Zea mays STS genomic, sequence tagged site Length = 267 Score = 38.2 bits (19), Expect = 1.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 553 atatatatatgctcttcat 571 ||||||||||||||||||| Sbjct: 110 atatatatatgctcttcat 128 >gi|92900909|gb|AC185476.1| Zea mays chromosome 4 clone CH201-216J18; ZMMBBc0216J18, *** SEQUENCING IN PROGRESS ***, 19 unordered pieces Length = 169065 Score = 38.2 bits (19), Expect = 1.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 553 atatatatatgctcttcat 571 ||||||||||||||||||| Sbjct: 25866 atatatatatgctcttcat 25884 >gi|91982828|gb|AC185284.1| Zea mays chromosome UNK clone CH201-260O3; ZMMBBc0260O03, *** SEQUENCING IN PROGRESS ***, 8 unordered pieces Length = 153304 Score = 38.2 bits (19), Expect = 1.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 199 tcctgtaaaaccttaactt 217 ||||||||||||||||||| Sbjct: 149454 tcctgtaaaaccttaactt 149472 Score = 38.2 bits (19), Expect = 1.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 199 tcctgtaaaaccttaactt 217 ||||||||||||||||||| Sbjct: 42271 tcctgtaaaaccttaactt 42289 >gi|88687860|gb|AC182827.1| Zea mays chromosome UNK clone CH201-188M16, *** SEQUENCING IN PROGRESS ***, 31 unordered pieces Length = 152105 Score = 38.2 bits (19), Expect = 1.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 553 atatatatatgctcttcat 571 ||||||||||||||||||| Sbjct: 97280 atatatatatgctcttcat 97262 >gi|54653580|gb|BT018799.1| Zea mays clone EL01N0528H08.d mRNA sequence Length = 1589 Score = 36.2 bits (18), Expect = 5.4 Identities = 21/22 (95%) Strand = Plus / Minus Query: 11 ggcaggccatcgccaagctcaa 32 |||||||||| ||||||||||| Sbjct: 883 ggcaggccattgccaagctcaa 862 >gi|54653580|gb|BT018799.1| Zea mays clone EL01N0528H08.d mRNA sequence Length = 1589 Score = 36.2 bits (18), Expect = 5.4 Identities = 21/22 (95%) Strand = Plus / Minus Query: 11 ggcaggccatcgccaagctcaa 32 |||||||||| ||||||||||| Sbjct: 883 ggcaggccattgccaagctcaa 862 >gi|88687870|gb|AC182837.1| Zea mays chromosome UNK clone CH201-168D12, *** SEQUENCING IN PROGRESS ***, 20 unordered pieces Length = 136851 Score = 36.2 bits (18), Expect = 5.4 Identities = 18/18 (100%) Strand = Plus / Minus Query: 135 agacctcactatagacac 152 |||||||||||||||||| Sbjct: 24230 agacctcactatagacac 24213 Database: mais_NCBI.fasta Posted date: Apr 26, 2006 11:51 AM Number of letters in database: 669,372,029 Number of sequences in database: 836,351 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 220,489 Number of Sequences: 836351 Number of extensions: 220489 Number of successful extensions: 10629 Number of sequences better than 10.0: 87 Number of HSP's better than 10.0 without gapping: 87 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 10475 Number of HSP's gapped (non-prelim): 149 length of query: 664 length of database: 669,372,029 effective HSP length: 19 effective length of query: 645 effective length of database: 653,481,360 effective search space: 421495477200 effective search space used: 421495477200 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 18 (36.2 bits)