BLASTN 2.2.6 [Apr-09-2003] BLASTN 2.2.6 [Apr-09-2003] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= QAY3d02.yg.2.1 (541 letters) Database: mais_NCBI.fasta 836,351 sequences; 669,372,029 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|71433147|gb|DR814197.1|DR814197 ZM_BFb0043L17.r ZM_BFb Zea ma... 874 0.0 gi|32799446|gb|CD951682.1|CD951682 SAY_115 GeneTag2 Zea mays cDN... 159 4e-37 gi|5268889|gb|AI770853.1|AI770853 606059C10.x2 606 - Ear tissue ... 38 1.1 gi|6564100|gb|AW231722.1|AW231722 687023D05.y2 687 - Early embry... 38 1.1 gi|6636958|gb|AW261230.1|AW261230 687072E10.y1 687 - Early embry... 38 1.1 gi|6636984|gb|AW261256.1|AW261256 687076A03.y1 687 - Early embry... 38 1.1 gi|6826935|gb|AW330578.1|AW330578 707029F11.x2 707 - Mixed adult... 38 1.1 gi|21390100|gb|BQ528149.1|BQ528149 1091055F03.y1 1091 - Immature... 38 1.1 gi|21760120|gb|BQ635661.1|BQ635661 1091070G02.y1 1091 - Immature... 38 1.1 gi|22472597|gb|BU037077.1|BU037077 946131H11.y1 946 - tassel pri... 38 1.1 gi|22546685|gb|BU098996.1|BU098996 946160F06.y1 946 - tassel pri... 38 1.1 gi|26558653|gb|CA830888.1|CA830888 1117012G10.y1 1117 - Unigene ... 38 1.1 gi|29543733|gb|CB604113.1|CB604113 3529_1_54_1_H01.y_1 3529 - 2 ... 38 1.1 gi|31353887|gb|CD438244.1|CD438244 EL01N0511A05.b Endosperm_5 Ze... 38 1.1 gi|31611947|gb|CD568569.1|CD568569 3529_1_119_1_G09.y_1 3529 - 2... 38 1.1 gi|32837471|gb|CD977149.1|CD977149 QAF26g07.yg QAF Zea mays cDNA... 38 1.1 gi|32847307|gb|CD986988.1|CD986988 QAN5e11.yg QAN Zea mays cDNA ... 38 1.1 gi|32848755|gb|CD988436.1|CD988436 QAP4c02.yg QAP Zea mays cDNA ... 38 1.1 gi|32849499|gb|CD989180.1|CD989180 QAS2b11.yg QAS Zea mays cDNA ... 38 1.1 gi|32928412|gb|CF033224.1|CF033224 QCF14a06.yg QCF Zea mays cDNA... 38 1.1 gi|32928537|gb|CF033349.1|CF033349 QCF15f01.yg QCF Zea mays cDNA... 38 1.1 gi|32928641|gb|CF033453.1|CF033453 QCF16h05.yg QCF Zea mays cDNA... 38 1.1 gi|32928848|gb|CF033660.1|CF033660 QCF19e06.yg QCF Zea mays cDNA... 38 1.1 gi|32929085|gb|CF033897.1|CF033897 QCF21e02.yg QCF Zea mays cDNA... 38 1.1 gi|32929091|gb|CF033903.1|CF033903 QCF21e08.yg QCF Zea mays cDNA... 38 1.1 gi|32929102|gb|CF033914.1|CF033914 QCF21g02.yg QCF Zea mays cDNA... 38 1.1 gi|32929103|gb|CF033915.1|CF033915 QCF21g03.yg QCF Zea mays cDNA... 38 1.1 gi|32929111|gb|CF033923.1|CF033923 QCF21h01.yg QCF Zea mays cDNA... 38 1.1 gi|32929206|gb|CF034018.1|CF034018 QCF23b02.yg QCF Zea mays cDNA... 38 1.1 gi|32929351|gb|CF034163.1|CF034163 QCF24h05.yg QCF Zea mays cDNA... 38 1.1 gi|32929433|gb|CF034245.1|CF034245 QCF2h11.yg QCF Zea mays cDNA ... 38 1.1 gi|60397967|gb|DN230783.1|DN230783 MEST1148_A02.T7-1 UGA-ZmSAM-X... 38 1.1 gi|67016031|gb|CO444780.1|CO444780 MZCCL10076B05.g Maize Endospe... 38 1.1 gi|67018030|gb|CO446779.1|CO446779 MZCCL10106E04.g Maize Endospe... 38 1.1 gi|67021285|gb|CO450034.1|CO450034 MZCCL10143F09.g Maize Endospe... 38 1.1 gi|67021301|gb|CO450050.1|CO450050 MZCCL10143H04.g Maize Endospe... 38 1.1 gi|67022090|gb|CO450839.1|CO450839 MZCCL10155G11.g Maize Endospe... 38 1.1 gi|87157163|gb|DY401952.1|DY401952 V-946-3C-G10.Gal4-R UGV-Reseq... 38 1.1 gi|54651220|gb|BT016439.1| Zea mays clone Contig272 mRNA sequence 38 1.1 gi|21213111|gb|AY109400.1| Zea mays CL1052_1 mRNA sequence 38 1.1 gi|54651220|gb|BT016439.1| Zea mays clone Contig272 mRNA sequence 38 1.1 gi|21213111|gb|AY109400.1| Zea mays CL1052_1 mRNA sequence 38 1.1 gi|20300941|gb|BQ163884.1|BQ163884 952084F05.y2 952 - BMS tissue... 36 4.4 gi|71765196|gb|DR963133.1|DR963133 ZM_BFb0081P05.r ZM_BFb Zea ma... 36 4.4 gi|58082407|gb|AC155548.2| Zea mays strain B73 clone ZMMBBc0157C... 36 4.4 >gi|71433147|gb|DR814197.1|DR814197 ZM_BFb0043L17.r ZM_BFb Zea mays cDNA 5', mRNA sequence Length = 766 Score = 874 bits (441), Expect = 0.0 Identities = 509/539 (94%) Strand = Plus / Plus Query: 1 aatattgacgatggaagcaatggcgacgtggctgctgaccattatcatcgatacaaggac 60 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 179 aatattgacgatggaagcaatggcgacgtagctgctgaccattatcatcgatacaaggac 238 Query: 61 gacatagaaatgatgcattcgattggcctcggctcttacagattctcattgtcatggtcg 120 |||||||||||||||||||||||||| ||| |||| ||||||||||||||||| |||||| Sbjct: 239 gacatagaaatgatgcattcgattggtctcagctcctacagattctcattgtcgtggtcg 298 Query: 121 agaattcttccaaagggtcgcttcggaggtgttaatcaggcaggcgttaaattctacaat 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 299 agaattcttccaaagggtcgcttcggaggtgttaatcaggcaggcgttaaattctacaat 358 Query: 181 agcctcatcaacggactgctagaaaaagggatacaaccatttgtgacgatcaaccactat 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 359 agcctcatcaacggactgctagaaaaagggatacaaccatttgtgacgatcaaccactat 418 Query: 241 gacatacctgaagaactccaagaaagatacaattcttggttgaacctagagattcaggag 300 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 419 gacatacctgaagaactccaagaaagatacaattcttggttgaacccagagattcaggag 478 Query: 301 gacttcacctacttcgctgagctttgcttcaagatntttggtgaccgagtaaagcattgg 360 |||||||||||||||| |||||||||||||||||| |||||||||||||||||||| ||| Sbjct: 479 gacttcacctacttcgttgagctttgcttcaagatgtttggtgaccgagtaaagcactgg 538 Query: 361 gtcacattcaatgagccaaatcttattnnaaagcttgcatactccannngggcatttcca 420 ||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||| Sbjct: 539 gtcacattcaatgagccaaatcttattgtaaagcttgcatactccattggggcatttcca 598 Query: 421 cccaaccnttgttccgagccatatgngaaannnnattcaggnaattcatcaactgannnn 480 ||||||| ||||||||||||||||| |||| ||||||| |||||||||||||| Sbjct: 599 cccaaccgttgttccgagccatatgggaaatgtgattcagggaattcatcaactgagccc 658 Query: 481 tacattgnngcgcataacatgatattagctcatgcaaagannntcaacatctacagaaa 539 ||||||| ||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 659 tacattgcagcgcataacatgatattagctcatgcaaagacggtcaacatctacagaaa 717 >gi|32799446|gb|CD951682.1|CD951682 SAY_115 GeneTag2 Zea mays cDNA, mRNA sequence Length = 163 Score = 159 bits (80), Expect = 4e-37 Identities = 94/101 (93%) Strand = Plus / Minus Query: 350 taaagcattgggtcacattcaatgagccaaatcttattnnaaagcttgcatactccannn 409 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 163 taaagcattgggtcacattcaatgagccaaatcttattgtaaagcttgcatactccagtg 104 Query: 410 gggcatttccacccaaccnttgttccgagccatatgngaaa 450 |||||||||||||||||| ||||||||||||||||| |||| Sbjct: 103 gggcatttccacccaaccgttgttccgagccatatgggaaa 63 >gi|5268889|gb|AI770853.1|AI770853 606059C10.x2 606 - Ear tissue cDNA library from Schmidt lab Zea mays cDNA, mRNA sequence Length = 349 Score = 38.2 bits (19), Expect = 1.1 Identities = 28/31 (90%) Strand = Plus / Plus Query: 349 gtaaagcattgggtcacattcaatgagccaa 379 |||||||| ||| | |||||||||||||||| Sbjct: 42 gtaaagcactggtttacattcaatgagccaa 72 >gi|6564100|gb|AW231722.1|AW231722 687023D05.y2 687 - Early embryo from Delaware Zea mays cDNA, mRNA sequence Length = 575 Score = 38.2 bits (19), Expect = 1.1 Identities = 28/31 (90%) Strand = Plus / Plus Query: 349 gtaaagcattgggtcacattcaatgagccaa 379 |||||||| ||| | |||||||||||||||| Sbjct: 414 gtaaagcactggtttacattcaatgagccaa 444 >gi|6636958|gb|AW261230.1|AW261230 687072E10.y1 687 - Early embryo from Delaware Zea mays cDNA, mRNA sequence Length = 618 Score = 38.2 bits (19), Expect = 1.1 Identities = 28/31 (90%) Strand = Plus / Plus Query: 349 gtaaagcattgggtcacattcaatgagccaa 379 |||||||| ||| | |||||||||||||||| Sbjct: 246 gtaaagcactggtttacattcaatgagccaa 276 >gi|6636984|gb|AW261256.1|AW261256 687076A03.y1 687 - Early embryo from Delaware Zea mays cDNA, mRNA sequence Length = 336 Score = 38.2 bits (19), Expect = 1.1 Identities = 28/31 (90%) Strand = Plus / Plus Query: 349 gtaaagcattgggtcacattcaatgagccaa 379 |||||||| ||| | |||||||||||||||| Sbjct: 246 gtaaagcactggtttacattcaatgagccaa 276 >gi|6826935|gb|AW330578.1|AW330578 707029F11.x2 707 - Mixed adult tissues from Walbot lab (SK) Zea mays cDNA, mRNA sequence Length = 613 Score = 38.2 bits (19), Expect = 1.1 Identities = 28/31 (90%) Strand = Plus / Plus Query: 349 gtaaagcattgggtcacattcaatgagccaa 379 |||||||| ||| | |||||||||||||||| Sbjct: 397 gtaaagcactggtttacattcaatgagccaa 427 >gi|21390100|gb|BQ528149.1|BQ528149 1091055F03.y1 1091 - Immature ear with common ESTs screened by Schmidt lab Zea mays cDNA, mRNA sequence Length = 455 Score = 38.2 bits (19), Expect = 1.1 Identities = 28/31 (90%) Strand = Plus / Plus Query: 349 gtaaagcattgggtcacattcaatgagccaa 379 |||||||| ||| | |||||||||||||||| Sbjct: 293 gtaaagcactggtttacattcaatgagccaa 323 >gi|21760120|gb|BQ635661.1|BQ635661 1091070G02.y1 1091 - Immature ear with common ESTs screened by Schmidt lab Zea mays cDNA, mRNA sequence Length = 555 Score = 38.2 bits (19), Expect = 1.1 Identities = 28/31 (90%) Strand = Plus / Plus Query: 349 gtaaagcattgggtcacattcaatgagccaa 379 |||||||| ||| | |||||||||||||||| Sbjct: 273 gtaaagcactggtttacattcaatgagccaa 303 >gi|22472597|gb|BU037077.1|BU037077 946131H11.y1 946 - tassel primordium prepared by Schmidt lab Zea mays cDNA, mRNA sequence Length = 481 Score = 38.2 bits (19), Expect = 1.1 Identities = 28/31 (90%) Strand = Plus / Plus Query: 349 gtaaagcattgggtcacattcaatgagccaa 379 |||||||| ||| | |||||||||||||||| Sbjct: 304 gtaaagcactggtttacattcaatgagccaa 334 >gi|22546685|gb|BU098996.1|BU098996 946160F06.y1 946 - tassel primordium prepared by Schmidt lab Zea mays cDNA, mRNA sequence Length = 631 Score = 38.2 bits (19), Expect = 1.1 Identities = 28/31 (90%) Strand = Plus / Plus Query: 349 gtaaagcattgggtcacattcaatgagccaa 379 |||||||| ||| | |||||||||||||||| Sbjct: 282 gtaaagcactggtttacattcaatgagccaa 312 >gi|26558653|gb|CA830888.1|CA830888 1117012G10.y1 1117 - Unigene V from Maize Genome Project Zea mays cDNA, mRNA sequence Length = 507 Score = 38.2 bits (19), Expect = 1.1 Identities = 28/31 (90%) Strand = Plus / Plus Query: 349 gtaaagcattgggtcacattcaatgagccaa 379 |||||||| ||| | |||||||||||||||| Sbjct: 308 gtaaagcactggtttacattcaatgagccaa 338 >gi|29543733|gb|CB604113.1|CB604113 3529_1_54_1_H01.y_1 3529 - 2 mm ear tissue from Schmidt and Hake labs Zea mays cDNA, mRNA sequence Length = 572 Score = 38.2 bits (19), Expect = 1.1 Identities = 28/31 (90%) Strand = Plus / Plus Query: 349 gtaaagcattgggtcacattcaatgagccaa 379 |||||||| ||| | |||||||||||||||| Sbjct: 143 gtaaagcactggtttacattcaatgagccaa 173 >gi|31353887|gb|CD438244.1|CD438244 EL01N0511A05.b Endosperm_5 Zea mays cDNA, mRNA sequence Length = 889 Score = 38.2 bits (19), Expect = 1.1 Identities = 28/31 (90%) Strand = Plus / Plus Query: 349 gtaaagcattgggtcacattcaatgagccaa 379 |||||||| ||| | |||||||||||||||| Sbjct: 431 gtaaagcactggtttacattcaatgagccaa 461 >gi|31611947|gb|CD568569.1|CD568569 3529_1_119_1_G09.y_1 3529 - 2 mm ear tissue from Schmidt and Hake labs Zea mays cDNA, mRNA sequence Length = 613 Score = 38.2 bits (19), Expect = 1.1 Identities = 28/31 (90%) Strand = Plus / Plus Query: 349 gtaaagcattgggtcacattcaatgagccaa 379 |||||||| ||| | |||||||||||||||| Sbjct: 145 gtaaagcactggtttacattcaatgagccaa 175 >gi|32837471|gb|CD977149.1|CD977149 QAF26g07.yg QAF Zea mays cDNA clone QAF26g07, mRNA sequence Length = 619 Score = 38.2 bits (19), Expect = 1.1 Identities = 28/31 (90%) Strand = Plus / Minus Query: 349 gtaaagcattgggtcacattcaatgagccaa 379 |||||||| ||| | |||||||||||||||| Sbjct: 181 gtaaagcactggtttacattcaatgagccaa 151 >gi|32847307|gb|CD986988.1|CD986988 QAN5e11.yg QAN Zea mays cDNA clone QAN5e11, mRNA sequence Length = 551 Score = 38.2 bits (19), Expect = 1.1 Identities = 28/31 (90%) Strand = Plus / Minus Query: 349 gtaaagcattgggtcacattcaatgagccaa 379 |||||||| ||| | |||||||||||||||| Sbjct: 181 gtaaagcactggtttacattcaatgagccaa 151 >gi|32848755|gb|CD988436.1|CD988436 QAP4c02.yg QAP Zea mays cDNA clone QAP4c02, mRNA sequence Length = 523 Score = 38.2 bits (19), Expect = 1.1 Identities = 28/31 (90%) Strand = Plus / Plus Query: 349 gtaaagcattgggtcacattcaatgagccaa 379 |||||||| ||| | |||||||||||||||| Sbjct: 420 gtaaagcactggtttacattcaatgagccaa 450 >gi|32849499|gb|CD989180.1|CD989180 QAS2b11.yg QAS Zea mays cDNA clone QAS2b11, mRNA sequence Length = 570 Score = 38.2 bits (19), Expect = 1.1 Identities = 28/31 (90%) Strand = Plus / Plus Query: 349 gtaaagcattgggtcacattcaatgagccaa 379 |||||||| ||| | |||||||||||||||| Sbjct: 420 gtaaagcactggtttacattcaatgagccaa 450 >gi|32928412|gb|CF033224.1|CF033224 QCF14a06.yg QCF Zea mays cDNA clone QCF14a06, mRNA sequence Length = 600 Score = 38.2 bits (19), Expect = 1.1 Identities = 28/31 (90%) Strand = Plus / Minus Query: 349 gtaaagcattgggtcacattcaatgagccaa 379 |||||||| ||| | |||||||||||||||| Sbjct: 180 gtaaagcactggtttacattcaatgagccaa 150 >gi|32928537|gb|CF033349.1|CF033349 QCF15f01.yg QCF Zea mays cDNA clone QCF15f01, mRNA sequence Length = 619 Score = 38.2 bits (19), Expect = 1.1 Identities = 28/31 (90%) Strand = Plus / Minus Query: 349 gtaaagcattgggtcacattcaatgagccaa 379 |||||||| ||| | |||||||||||||||| Sbjct: 180 gtaaagcactggtttacattcaatgagccaa 150 >gi|32928641|gb|CF033453.1|CF033453 QCF16h05.yg QCF Zea mays cDNA clone QCF16h05, mRNA sequence Length = 600 Score = 38.2 bits (19), Expect = 1.1 Identities = 28/31 (90%) Strand = Plus / Minus Query: 349 gtaaagcattgggtcacattcaatgagccaa 379 |||||||| ||| | |||||||||||||||| Sbjct: 180 gtaaagcactggtttacattcaatgagccaa 150 >gi|32928848|gb|CF033660.1|CF033660 QCF19e06.yg QCF Zea mays cDNA clone QCF19e06, mRNA sequence Length = 599 Score = 38.2 bits (19), Expect = 1.1 Identities = 28/31 (90%) Strand = Plus / Minus Query: 349 gtaaagcattgggtcacattcaatgagccaa 379 |||||||| ||| | |||||||||||||||| Sbjct: 180 gtaaagcactggtttacattcaatgagccaa 150 >gi|32929085|gb|CF033897.1|CF033897 QCF21e02.yg QCF Zea mays cDNA clone QCF21e02, mRNA sequence Length = 599 Score = 38.2 bits (19), Expect = 1.1 Identities = 28/31 (90%) Strand = Plus / Minus Query: 349 gtaaagcattgggtcacattcaatgagccaa 379 |||||||| ||| | |||||||||||||||| Sbjct: 180 gtaaagcactggtttacattcaatgagccaa 150 >gi|32929091|gb|CF033903.1|CF033903 QCF21e08.yg QCF Zea mays cDNA clone QCF21e08, mRNA sequence Length = 600 Score = 38.2 bits (19), Expect = 1.1 Identities = 28/31 (90%) Strand = Plus / Minus Query: 349 gtaaagcattgggtcacattcaatgagccaa 379 |||||||| ||| | |||||||||||||||| Sbjct: 180 gtaaagcactggtttacattcaatgagccaa 150 >gi|32929102|gb|CF033914.1|CF033914 QCF21g02.yg QCF Zea mays cDNA clone QCF21g02, mRNA sequence Length = 230 Score = 38.2 bits (19), Expect = 1.1 Identities = 28/31 (90%) Strand = Plus / Minus Query: 349 gtaaagcattgggtcacattcaatgagccaa 379 |||||||| ||| | |||||||||||||||| Sbjct: 181 gtaaagcactggtttacattcaatgagccaa 151 >gi|32929103|gb|CF033915.1|CF033915 QCF21g03.yg QCF Zea mays cDNA clone QCF21g03, mRNA sequence Length = 599 Score = 38.2 bits (19), Expect = 1.1 Identities = 28/31 (90%) Strand = Plus / Minus Query: 349 gtaaagcattgggtcacattcaatgagccaa 379 |||||||| ||| | |||||||||||||||| Sbjct: 180 gtaaagcactggtttacattcaatgagccaa 150 >gi|32929111|gb|CF033923.1|CF033923 QCF21h01.yg QCF Zea mays cDNA clone QCF21h01, mRNA sequence Length = 599 Score = 38.2 bits (19), Expect = 1.1 Identities = 28/31 (90%) Strand = Plus / Minus Query: 349 gtaaagcattgggtcacattcaatgagccaa 379 |||||||| ||| | |||||||||||||||| Sbjct: 180 gtaaagcactggtttacattcaatgagccaa 150 >gi|32929206|gb|CF034018.1|CF034018 QCF23b02.yg QCF Zea mays cDNA clone QCF23b02, mRNA sequence Length = 599 Score = 38.2 bits (19), Expect = 1.1 Identities = 28/31 (90%) Strand = Plus / Minus Query: 349 gtaaagcattgggtcacattcaatgagccaa 379 |||||||| ||| | |||||||||||||||| Sbjct: 180 gtaaagcactggtttacattcaatgagccaa 150 >gi|32929351|gb|CF034163.1|CF034163 QCF24h05.yg QCF Zea mays cDNA clone QCF24h05, mRNA sequence Length = 617 Score = 38.2 bits (19), Expect = 1.1 Identities = 28/31 (90%) Strand = Plus / Minus Query: 349 gtaaagcattgggtcacattcaatgagccaa 379 |||||||| ||| | |||||||||||||||| Sbjct: 182 gtaaagcactggtttacattcaatgagccaa 152 >gi|32929433|gb|CF034245.1|CF034245 QCF2h11.yg QCF Zea mays cDNA clone QCF2h11, mRNA sequence Length = 565 Score = 38.2 bits (19), Expect = 1.1 Identities = 28/31 (90%) Strand = Plus / Minus Query: 349 gtaaagcattgggtcacattcaatgagccaa 379 |||||||| ||| | |||||||||||||||| Sbjct: 180 gtaaagcactggtttacattcaatgagccaa 150 >gi|60397967|gb|DN230783.1|DN230783 MEST1148_A02.T7-1 UGA-ZmSAM-XZ2 Zea mays cDNA, mRNA sequence Length = 676 Score = 38.2 bits (19), Expect = 1.1 Identities = 28/31 (90%) Strand = Plus / Plus Query: 349 gtaaagcattgggtcacattcaatgagccaa 379 |||||||| ||| | |||||||||||||||| Sbjct: 554 gtaaagcactggtttacattcaatgagccaa 584 >gi|67016031|gb|CO444780.1|CO444780 MZCCL10076B05.g Maize Endosperm cDNA Library Zea mays cDNA, mRNA sequence Length = 896 Score = 38.2 bits (19), Expect = 1.1 Identities = 28/31 (90%) Strand = Plus / Plus Query: 349 gtaaagcattgggtcacattcaatgagccaa 379 |||||||| ||| | |||||||||||||||| Sbjct: 181 gtaaagcactggtttacattcaatgagccaa 211 >gi|67018030|gb|CO446779.1|CO446779 MZCCL10106E04.g Maize Endosperm cDNA Library Zea mays cDNA, mRNA sequence Length = 840 Score = 38.2 bits (19), Expect = 1.1 Identities = 28/31 (90%) Strand = Plus / Plus Query: 349 gtaaagcattgggtcacattcaatgagccaa 379 |||||||| ||| | |||||||||||||||| Sbjct: 668 gtaaagcactggtttacattcaatgagccaa 698 >gi|67021285|gb|CO450034.1|CO450034 MZCCL10143F09.g Maize Endosperm cDNA Library Zea mays cDNA, mRNA sequence Length = 881 Score = 38.2 bits (19), Expect = 1.1 Identities = 28/31 (90%) Strand = Plus / Plus Query: 349 gtaaagcattgggtcacattcaatgagccaa 379 |||||||| ||| | |||||||||||||||| Sbjct: 184 gtaaagcactggtttacattcaatgagccaa 214 >gi|67021301|gb|CO450050.1|CO450050 MZCCL10143H04.g Maize Endosperm cDNA Library Zea mays cDNA, mRNA sequence Length = 877 Score = 38.2 bits (19), Expect = 1.1 Identities = 28/31 (90%) Strand = Plus / Plus Query: 349 gtaaagcattgggtcacattcaatgagccaa 379 |||||||| ||| | |||||||||||||||| Sbjct: 161 gtaaagcactggtttacattcaatgagccaa 191 >gi|67022090|gb|CO450839.1|CO450839 MZCCL10155G11.g Maize Endosperm cDNA Library Zea mays cDNA, mRNA sequence Length = 845 Score = 38.2 bits (19), Expect = 1.1 Identities = 28/31 (90%) Strand = Plus / Plus Query: 349 gtaaagcattgggtcacattcaatgagccaa 379 |||||||| ||| | |||||||||||||||| Sbjct: 190 gtaaagcactggtttacattcaatgagccaa 220 >gi|87157163|gb|DY401952.1|DY401952 V-946-3C-G10.Gal4-R UGV-Reseq Zea mays cDNA, mRNA sequence Length = 703 Score = 38.2 bits (19), Expect = 1.1 Identities = 28/31 (90%) Strand = Plus / Plus Query: 349 gtaaagcattgggtcacattcaatgagccaa 379 |||||||| ||| | |||||||||||||||| Sbjct: 290 gtaaagcactggtttacattcaatgagccaa 320 >gi|54651220|gb|BT016439.1| Zea mays clone Contig272 mRNA sequence Length = 1566 Score = 38.2 bits (19), Expect = 1.1 Identities = 28/31 (90%) Strand = Plus / Plus Query: 349 gtaaagcattgggtcacattcaatgagccaa 379 |||||||| ||| | |||||||||||||||| Sbjct: 431 gtaaagcactggtttacattcaatgagccaa 461 >gi|21213111|gb|AY109400.1| Zea mays CL1052_1 mRNA sequence Length = 2031 Score = 38.2 bits (19), Expect = 1.1 Identities = 28/31 (90%) Strand = Plus / Plus Query: 349 gtaaagcattgggtcacattcaatgagccaa 379 |||||||| ||| | |||||||||||||||| Sbjct: 428 gtaaagcactggtttacattcaatgagccaa 458 >gi|54651220|gb|BT016439.1| Zea mays clone Contig272 mRNA sequence Length = 1566 Score = 38.2 bits (19), Expect = 1.1 Identities = 28/31 (90%) Strand = Plus / Plus Query: 349 gtaaagcattgggtcacattcaatgagccaa 379 |||||||| ||| | |||||||||||||||| Sbjct: 431 gtaaagcactggtttacattcaatgagccaa 461 >gi|21213111|gb|AY109400.1| Zea mays CL1052_1 mRNA sequence Length = 2031 Score = 38.2 bits (19), Expect = 1.1 Identities = 28/31 (90%) Strand = Plus / Plus Query: 349 gtaaagcattgggtcacattcaatgagccaa 379 |||||||| ||| | |||||||||||||||| Sbjct: 428 gtaaagcactggtttacattcaatgagccaa 458 >gi|20300941|gb|BQ163884.1|BQ163884 952084F05.y2 952 - BMS tissue from Walbot Lab (reduced rRNA) Zea mays cDNA, mRNA sequence Length = 544 Score = 36.2 bits (18), Expect = 4.4 Identities = 18/18 (100%) Strand = Plus / Plus Query: 351 aaagcattgggtcacatt 368 |||||||||||||||||| Sbjct: 494 aaagcattgggtcacatt 511 >gi|71765196|gb|DR963133.1|DR963133 ZM_BFb0081P05.r ZM_BFb Zea mays cDNA 5', mRNA sequence Length = 849 Score = 36.2 bits (18), Expect = 4.4 Identities = 18/18 (100%) Strand = Plus / Plus Query: 165 cgttaaattctacaatag 182 |||||||||||||||||| Sbjct: 656 cgttaaattctacaatag 673 >gi|58082407|gb|AC155548.2| Zea mays strain B73 clone ZMMBBc0157C18, *** SEQUENCING IN PROGRESS ***, 12 unordered pieces Length = 147386 Score = 36.2 bits (18), Expect = 4.4 Identities = 18/18 (100%) Strand = Plus / Minus Query: 259 caagaaagatacaattct 276 |||||||||||||||||| Sbjct: 138245 caagaaagatacaattct 138228 Database: mais_NCBI.fasta Posted date: Apr 26, 2006 11:51 AM Number of letters in database: 669,372,029 Number of sequences in database: 836,351 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 125,742 Number of Sequences: 836351 Number of extensions: 125742 Number of successful extensions: 7925 Number of sequences better than 10.0: 45 Number of HSP's better than 10.0 without gapping: 45 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 7880 Number of HSP's gapped (non-prelim): 45 length of query: 541 length of database: 669,372,029 effective HSP length: 19 effective length of query: 522 effective length of database: 653,481,360 effective search space: 341117269920 effective search space used: 341117269920 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 18 (36.2 bits)