BLASTN 2.2.6 [Apr-09-2003] BLASTN 2.2.6 [Apr-09-2003] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= 8161196.3.1 (825 letters) Database: mais_NCBI.fasta 836,351 sequences; 669,372,029 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|76293630|gb|DV033198.1|DV033198 ZM_BFb0157F07.r ZM_BFb Zea ma... 1166 0.0 gi|78083947|gb|DV512340.1|DV512340 ZM_BFb0192P12.r ZM_BFb Zea ma... 1132 0.0 gi|76294406|gb|DV033974.1|DV033974 ZM_BFb0158N13.r ZM_BFb Zea ma... 1114 0.0 gi|78083774|gb|DV512167.1|DV512167 ZM_BFb0192L10.r ZM_BFb Zea ma... 1074 0.0 gi|71424139|gb|DR806251.1|DR806251 ZM_BFb0032B12.r ZM_BFb Zea ma... 1072 0.0 gi|71323377|gb|DR798339.1|DR798339 ZM_BFb0020N04.r ZM_BFb Zea ma... 1057 0.0 gi|76280920|gb|DV020488.1|DV020488 ZM_BFb0138N11.r ZM_BFb Zea ma... 1057 0.0 gi|71435278|gb|DR816328.1|DR816328 ZM_BFb0047I04.r ZM_BFb Zea ma... 1041 0.0 gi|74238806|gb|DT646720.1|DT646720 ZM_BFb0107F18.r ZM_BFb Zea ma... 999 0.0 gi|13382348|gb|BG459023.1|BG459023 947052H08.y1 947 - 2 week sho... 971 0.0 gi|71439538|gb|DR820588.1|DR820588 ZM_BFb0059C10.r ZM_BFb Zea ma... 961 0.0 gi|31909113|gb|CD650756.1|CD650756 3529_1_129_1_D07.y_2 3529 - 2... 769 0.0 gi|13558687|gb|BG550043.1|BG550043 947080F02.y2 947 - 2 week sho... 309 3e-82 gi|92901113|gb|AC185481.1| Zea mays chromosome 4 clone CH201-199... 264 2e-68 gi|78112618|gb|DV531012.1|DV531012 ZM_BFb0221A03.r ZM_BFb Zea ma... 115 9e-24 gi|78119614|gb|DV537998.1|DV537998 ZM_BFb0231D11.r ZM_BFb Zea ma... 111 1e-22 gi|88746203|gb|DY530344.1|DY530344 ZM_BFb0248G15.r ZM_BFb Zea ma... 38 1.7 gi|89249132|gb|DY620918.1|DY620918 ZM_BFb0280L02.f ZM_BFb Zea ma... 38 1.7 gi|89758953|gb|DY687934.1|DY687934 ZM_BFb0280L02.r ZM_BFb Zea ma... 38 1.7 gi|6022050|gb|AW066993.1|AW066993 683012H10.x1 683 - 14 day imma... 36 6.8 gi|6137978|gb|AW134432.1|AW134432 707001E04.x1 707 - Mixed adult... 36 6.8 gi|29544077|gb|CB604457.1|CB604457 3529_1_63_1_F05.x_1 3529 - 2 ... 36 6.8 gi|31350065|gb|CD434422.1|CD434422 EL01N0324A02.b Endosperm_3 Ze... 36 6.8 gi|31354533|gb|CD438890.1|CD438890 EL01N0518E09.b Endosperm_5 Ze... 36 6.8 gi|31355190|gb|CD439547.1|CD439547 EL01N0526B10.b Endosperm_5 Ze... 36 6.8 gi|50336406|gb|CO531532.1|CO531532 3530_1_208_1_A05.y_1 3530 - F... 36 6.8 gi|60341470|gb|DN208443.1|DN208443 MEST869_B07.T7-1 UGA-ZmSAM-XZ... 36 6.8 gi|71331770|gb|DR802745.1|DR802745 ZM_BFb0027B22.r ZM_BFb Zea ma... 36 6.8 gi|71434820|gb|DR815870.1|DR815870 ZM_BFb0046H09.r ZM_BFb Zea ma... 36 6.8 gi|71435608|gb|DR816658.1|DR816658 ZM_BFb0048E02.r ZM_BFb Zea ma... 36 6.8 gi|71775047|gb|DR972925.1|DR972925 ZM_BFb0096F06.r ZM_BFb Zea ma... 36 6.8 gi|74233581|gb|DT641495.1|DT641495 ZM_BFb0099J07.r ZM_BFb Zea ma... 36 6.8 gi|76011911|gb|DT939081.1|DT939081 ZM_BFb0120M23.r ZM_BFb Zea ma... 36 6.8 gi|76282126|gb|DV021694.1|DV021694 ZM_BFb0140I21.r ZM_BFb Zea ma... 36 6.8 gi|76283439|gb|DV023007.1|DV023007 ZM_BFb0142H03.f ZM_BFb Zea ma... 36 6.8 gi|76925800|gb|DV170600.1|DV170600 ZM_BFb0170E03.r ZM_BFb Zea ma... 36 6.8 gi|76935253|gb|DV174266.1|DV174266 ZM_BFb0177M14.r ZM_BFb Zea ma... 36 6.8 gi|78023566|gb|DV491953.1|DV491953 1000221-B12.T7-1 UGI-Reseq Ze... 36 6.8 gi|78084518|gb|DV512911.1|DV512911 ZM_BFb0193M19.r ZM_BFb Zea ma... 36 6.8 gi|78180802|gb|DV551175.1|DV551175 1000063-A06.GAD10-F UGI-Reseq... 36 6.8 gi|86471279|gb|DY237649.1|DY237649 ZM_BFb0254O17.r ZM_BFb Zea ma... 36 6.8 gi|87156776|gb|DY401565.1|DY401565 V-946-3B-B07.Gal4-R UGV-Reseq... 36 6.8 gi|91052674|gb|EB163092.1|EB163092 ZM_BFb0303O01.f ZM_BFb Zea ma... 36 6.8 gi|91055728|gb|EB166146.1|EB166146 ZM_BFb0345J08.r ZM_BFb Zea ma... 36 6.8 gi|91875382|gb|EB405339.1|EB405339 ZM_BFb0315E24.r ZM_BFb Zea ma... 36 6.8 gi|54651241|gb|BT016460.1| Zea mays clone Contig293 mRNA sequence 36 6.8 gi|54652135|gb|BT017354.1| Zea mays clone EL01N0324A02.c mRNA se... 36 6.8 gi|21208236|gb|AY105158.1| Zea mays PCO107789 mRNA sequence 36 6.8 gi|54652135|gb|BT017354.1| Zea mays clone EL01N0324A02.c mRNA se... 36 6.8 gi|54651241|gb|BT016460.1| Zea mays clone Contig293 mRNA sequence 36 6.8 gi|21208236|gb|AY105158.1| Zea mays PCO107789 mRNA sequence 36 6.8 gi|9858872|gb|AF289237.1|AF289237 Zea mays calcium/calmodulin de... 36 6.8 gi|92900909|gb|AC185476.1| Zea mays chromosome 4 clone CH201-216... 36 6.8 gi|92110165|gb|AC185302.1| Zea mays chromosome UNK clone CH201-4... 36 6.8 gi|90963040|gb|AC184168.1| Zea mays chromosome UNK clone ZMMBBb-... 36 6.8 gi|88687857|gb|AC182824.1| Zea mays chromosome UNK clone CH201-2... 36 6.8 gi|58082448|gb|AC155589.2| Zea mays strain B73 clone ZMMBBc0200O... 36 6.8 gi|58082437|gb|AC155578.2| Zea mays strain B73 clone ZMMBBc0190D... 36 6.8 gi|58082329|gb|AC155468.2| Zea mays strain B73 clone ZMMBBb0530P... 36 6.8 gi|58082326|gb|AC155465.2| Zea mays strain B73 clone ZMMBBb0518K... 36 6.8 gi|58082283|gb|AC155421.2| Zea mays strain B73 clone ZMMBBb0216P... 36 6.8 >gi|76293630|gb|DV033198.1|DV033198 ZM_BFb0157F07.r ZM_BFb Zea mays cDNA 5', mRNA sequence Length = 839 Score = 1166 bits (588), Expect = 0.0 Identities = 768/829 (92%), Gaps = 9/829 (1%) Strand = Plus / Plus Query: 2 atcgcattctcctcccaccaccaccacaccacgcctcgcttatnnnnnnn-gagacccga 60 ||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 6 atcgcattctcctcccaccaccaccacaccacgcctcgcttatccccccccgagacccga 65 Query: 61 cccctgctcgacgacgtgctggcaaaacctcctcctagtcctcctctcgcagaaggaggc 120 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 66 cccctgctcgacgacgtgctggcaaaacctcctcctagtcctc---tcgcagaaggaggc 122 Query: 121 tgtgnnnnnnncttcatcggcgcggcaacagcgaaagcttctcggtc----tctcccacc 176 |||| ||||||||| |||||||||||||||||||||||||| ||||||||| Sbjct: 123 tgtgttctttccttcatcggtgcggcaacagcgaaagcttctcggtcgatctctcccacc 182 Query: 177 gctgctccgccgtttgggtggttccgcgccttggccgcgcgggttggatccgagctccgt 236 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 183 gctgctccgccgtttgggtggttccgcgccttggccgcgcgggttggatccgagctccgt 242 Query: 237 gcagcagctccgccgcgatacgtatcgcataggattccactggatccagctgctgaacgg 296 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||| | | Sbjct: 243 gcagcagctccgccgcgatacgtatcgcataggattccactggattcagctgctgagcag 302 Query: 297 ggtaccagaaggtggatttggtagtagcactgaacagcgagtggaatttctctaatactg 356 ||||| ||||||||||||| || |||| ||||||||| ||| ||||||||| ||||||| Sbjct: 303 ggtactggaaggtggatttgatactagctctgaacagccagtagaatttctcaaatactg 362 Query: 357 tccaggatcatggttcctctctgtggtttctgtgggaaacaaaggtcaatgatctactgc 416 ||||||||||||| | ||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 363 tccaggatcatggcttctctctgtgatttctgtgggaaacaaaggtcaatgatctactgc 422 Query: 417 agatcggatgcggcatcattgtgcttatcatgcgaccgtagcgttcattcagctaatgca 476 ||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 423 agatcagatgcggcatcattgtgcttatcatgcgaccgtaatgttcattcagctaatgca 482 Query: 477 ctgtctcggcgtcatagaaggacccttctttgtgatcgttgtggtttacagcctgcatca 536 |||||||| ||||||| ||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 483 ctgtctcgacgtcatacaaggacccttctttgtgatcgttgtggttcacagcctgcatca 542 Query: 537 gtccgatgtcttgaggacaacacatcactttgccaaaactgtgattggaatgggcatgat 596 ||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||| Sbjct: 543 gtccgatgtcttgaggacaacgcatcactttgccaaaactgtgactggaatgggcatgat 602 Query: 597 gcagcatcaggggcttctgggcataaaaggcaggccataaactgttactcagggtgccca 656 |||| ||||||||||||||| ||||||||||| ||||||||||| ||||||||||||||| Sbjct: 603 gcagaatcaggggcttctggacataaaaggcaagccataaactgctactcagggtgccca 662 Query: 657 tcatcagcagagctttcgagaatctggtcatttattaccgatatcccgactgtagcagct 716 ||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 663 tcatctgcagagctttcgagaatctggtcatttattactgatatcccgactgtagcagct 722 Query: 717 gagcccaactatgaggatggactaagcatgatgacaattgatgacaagtgatgtgactaa 776 |||||| |||||||||||| ||||||||||||||||||||||| | |||||||| ||||| Sbjct: 723 gagcccgactatgaggatgaactaagcatgatgacaattgatggc-agtgatgttactaa 781 Query: 777 tcatcacggtgcttcagatgataaacgattgttggaaatagctaacaca 825 || ||||| | |||||||||||||| ||||||||| ||||||||||||| Sbjct: 782 tcgtcacgatacttcagatgataaaagattgttgggaatagctaacaca 830 >gi|78083947|gb|DV512340.1|DV512340 ZM_BFb0192P12.r ZM_BFb Zea mays cDNA 5', mRNA sequence Length = 806 Score = 1132 bits (571), Expect = 0.0 Identities = 748/808 (92%), Gaps = 9/808 (1%) Strand = Plus / Plus Query: 23 caccacaccacgcctcgcttatnnnnnnn-gagacccgacccctgctcgacgacgtgctg 81 |||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 1 caccacaccacgcctcgcttatccccccccgagacccgacccctgctcgacgacgtgctg 60 Query: 82 gcaaaacctcctcctagtcctcctctcgcagaaggaggctgtgnnnnnnncttcatcggc 141 |||||||||||||||||||||| |||||||||||||||||| ||||||||| Sbjct: 61 gcaaaacctcctcctagtcctc---tcgcagaaggaggctgtgttctttccttcatcggt 117 Query: 142 gcggcaacagcgaaagcttctcggtc----tctcccaccgctgctccgccgtttgggtgg 197 |||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 118 gcggcaacagcgaaagcttctcggtcgatctctcccaccgctgctccgccgtttgggtgg 177 Query: 198 ttccgcgccttggccgcgcgggttggatccgagctccgtgcagcagctccgccgcgatac 257 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 178 ttccgcgccttggccgcgcgggttggatccgagctccgtgcagcagctccgccgcgatac 237 Query: 258 gtatcgcataggattccactggatccagctgctgaacggggtaccagaaggtggatttgg 317 |||||||||||||||||||||||| |||||||||| | |||||| ||||||||||||| Sbjct: 238 gtatcgcataggattccactggattcagctgctgagcagggtactggaaggtggatttga 297 Query: 318 tagtagcactgaacagcgagtggaatttctctaatactgtccaggatcatggttcctctc 377 || |||| ||||||||| ||| ||||||||| |||||||||||||||||||| | ||||| Sbjct: 298 tactagctctgaacagccagtagaatttctcaaatactgtccaggatcatggcttctctc 357 Query: 378 tgtggtttctgtgggaaacaaaggtcaatgatctactgcagatcggatgcggcatcattg 437 |||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 358 tgtgatttctgtgggaaacaaaggtcaatgatctactgcagatcagatgcggcatcattg 417 Query: 438 tgcttatcatgcgaccgtagcgttcattcagctaatgcactgtctcggcgtcatagaagg 497 ||||||||||||||||||| |||||||||||||||||||||||||| ||||||| |||| Sbjct: 418 tgcttatcatgcgaccgtaatgttcattcagctaatgcactgtctcgacgtcatacaagg 477 Query: 498 acccttctttgtgatcgttgtggtttacagcctgcatcagtccgatgtcttgaggacaac 557 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 478 acccttctttgtgatcgttgtggttcacagcctgcatcagtccgatgtcttgaggacaac 537 Query: 558 acatcactttgccaaaactgtgattggaatgggcatgatgcagcatcaggggcttctggg 617 |||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||| Sbjct: 538 gcatcactttgccaaaactgtgactggaatgggcatgatgcagaatcaggggcttctgga 597 Query: 618 cataaaaggcaggccataaactgttactcagggtgcccatcatcagcagagctttcgaga 677 ||||||||||| ||||||||||| |||||||||||||||||||| ||||||||||||||| Sbjct: 598 cataaaaggcaagccataaactgctactcagggtgcccatcatctgcagagctttcgaga 657 Query: 678 atctggtcatttattaccgatatcccgactgtagcagctgagcccaactatgaggatgga 737 ||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||| Sbjct: 658 atctggtcatttattactgatatcccgactgtagcagctgagcccgactatgaggatgga 717 Query: 738 ctaagcatgatgacaattgatgacaagtgatgtgactaatcatcacggtgcttcagatga 797 |||||||||||||||||||||| | |||||||| ||||||| ||||| | |||||||||| Sbjct: 718 ctaagcatgatgacaattgatggc-agtgatgttactaatcgtcacgatacttcagatga 776 Query: 798 taaacgattgttggaaatagctaacaca 825 |||| ||||||||| ||||||||||||| Sbjct: 777 taaaagattgttgggaatagctaacaca 804 >gi|76294406|gb|DV033974.1|DV033974 ZM_BFb0158N13.r ZM_BFb Zea mays cDNA 5', mRNA sequence Length = 805 Score = 1114 bits (562), Expect = 0.0 Identities = 715/766 (93%), Gaps = 8/766 (1%) Strand = Plus / Plus Query: 52 gagacccgacccctgctcgacgacgtgctggcaaaacctcctcctagtcctcctctcgca 111 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 28 gagacccgacccctgctcgacgacgtgctggcaaaacctcctcctagtcctc---tcgca 84 Query: 112 gaaggaggctgtgnnnnnnncttcatcggcgcggcaacagcgaaagcttctcggtc---- 167 ||||||||||||| ||||||||| |||||||||||||||||||||||||| Sbjct: 85 gaaggaggctgtgttctttccttcatcggtgcggcaacagcgaaagcttctcggtcgatc 144 Query: 168 tctcccaccgctgctccgccgtttgggtggttccgcgccttggccgcgcgggttggatcc 227 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 145 tctcccaccgctgctccgccgtttgggtggttccgcgccttggccgcgcgggttggatcc 204 Query: 228 gagctccgtgcagcagctccgccgcgatacgtatcgcataggattccactggatccagct 287 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 205 gagctccgtgcagcagctccgccgcgatacgtatcgcataggattccactggattcagct 264 Query: 288 gctgaacggggtaccagaaggtggatttggtagtagcactgaacagcgagtggaatttct 347 ||||| | |||||| ||||||||||||| || |||| ||||||||| ||| |||||||| Sbjct: 265 gctgagcagggtactggaaggtggatttgatactagctctgaacagccagtagaatttct 324 Query: 348 ctaatactgtccaggatcatggttcctctctgtggtttctgtgggaaacaaaggtcaatg 407 | |||||||||||||||||||| | ||||||||| ||||||||||||||||||||||||| Sbjct: 325 caaatactgtccaggatcatggcttctctctgtgatttctgtgggaaacaaaggtcaatg 384 Query: 408 atctactgcagatcggatgcggcatcattgtgcttatcatgcgaccgtagcgttcattca 467 |||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 385 atctactgcagatcagatgcggcatcattgtgcttatcatgcgaccgtaatgttcattca 444 Query: 468 gctaatgcactgtctcggcgtcatagaaggacccttctttgtgatcgttgtggtttacag 527 ||||||||||||||||| ||||||| ||||||||||||||||||||||||||||| |||| Sbjct: 445 gctaatgcactgtctcgacgtcatacaaggacccttctttgtgatcgttgtggttcacag 504 Query: 528 cctgcatcagtccgatgtcttgaggacaacacatcactttgccaaaactgtgattggaat 587 |||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||| Sbjct: 505 cctgcatcagtccgatgtcttgaggacaacgcatcactttgccaaaactgtgactggaat 564 Query: 588 gggcatgatgcagcatcaggggcttctgggcataaaaggcaggccataaactgttactca 647 ||||||||||||| ||||||||||||||| ||||||||||| ||||||||||| |||||| Sbjct: 565 gggcatgatgcagaatcaggggcttctggacataaaaggcaagccataaactgctactca 624 Query: 648 gggtgcccatcatcagcagagctttcgagaatctggtcatttattaccgatatcccgact 707 |||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 625 gggtgcccatcatctgcagagctttcgagaatctggtcatttattactgatatcccgact 684 Query: 708 gtagcagctgagcccaactatgaggatggactaagcatgatgacaattgatgacaagtga 767 ||||||||||||||| |||||||||||||||||||||||||||||||||||| | ||||| Sbjct: 685 gtagcagctgagcccgactatgaggatggactaagcatgatgacaattgatggc-agtga 743 Query: 768 tgtgactaatcatcacggtgcttcagatgataaacgattgttggaa 813 ||| ||||||| ||||| | |||||||||||||| ||||||||||| Sbjct: 744 tgttactaatcgtcacgatacttcagatgataaaagattgttggaa 789 >gi|78083774|gb|DV512167.1|DV512167 ZM_BFb0192L10.r ZM_BFb Zea mays cDNA 5', mRNA sequence Length = 763 Score = 1074 bits (542), Expect = 0.0 Identities = 710/767 (92%), Gaps = 9/767 (1%) Strand = Plus / Plus Query: 23 caccacaccacgcctcgcttatnnnnnnn-gagacccgacccctgctcgacgacgtgctg 81 |||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 1 caccacaccacgcctcgcttatccccccccgagacccgacccctgctcgacgacgtgctg 60 Query: 82 gcaaaacctcctcctagtcctcctctcgcagaaggaggctgtgnnnnnnncttcatcggc 141 |||||||||||||||||||||| |||||||||||||||||| ||||||||| Sbjct: 61 gcaaaacctcctcctagtcctc---tcgcagaaggaggctgtgttctttccttcatcggt 117 Query: 142 gcggcaacagcgaaagcttctcggtc----tctcccaccgctgctccgccgtttgggtgg 197 |||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 118 gcggcaacagcgaaagcttctcggtcgatctctcccaccgctgctccgccgtttgggtgg 177 Query: 198 ttccgcgccttggccgcgcgggttggatccgagctccgtgcagcagctccgccgcgatac 257 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 178 ttccgcgccttggccgcgcgggttggatccgagctccgtgcagcagctccgccgcgatac 237 Query: 258 gtatcgcataggattccactggatccagctgctgaacggggtaccagaaggtggatttgg 317 |||||||||||||||||||||||| |||||||||| | |||||| ||||||||||||| Sbjct: 238 gtatcgcataggattccactggattcagctgctgagcagggtactggaaggtggatttga 297 Query: 318 tagtagcactgaacagcgagtggaatttctctaatactgtccaggatcatggttcctctc 377 || |||| ||||||||| ||| ||||||||| |||||||||||||||||||| | ||||| Sbjct: 298 tactagctctgaacagccagtagaatttctcaaatactgtccaggatcatggcttctctc 357 Query: 378 tgtggtttctgtgggaaacaaaggtcaatgatctactgcagatcggatgcggcatcattg 437 |||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 358 tgtgatttctgtgggaaacaaaggtcaatgatctactgcagatcagatgcggcatcattg 417 Query: 438 tgcttatcatgcgaccgtagcgttcattcagctaatgcactgtctcggcgtcatagaagg 497 ||||||||||||||||||| |||||||||||||||||||||||||| ||||||| |||| Sbjct: 418 tgcttatcatgcgaccgtaatgttcattcagctaatgcactgtctcgacgtcatacaagg 477 Query: 498 acccttctttgtgatcgttgtggtttacagcctgcatcagtccgatgtcttgaggacaac 557 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 478 acccttctttgtgatcgttgtggttcacagcctgcatcagtccgatgtcttgaggacaac 537 Query: 558 acatcactttgccaaaactgtgattggaatgggcatgatgcagcatcaggggcttctggg 617 |||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||| Sbjct: 538 gcatcactttgccaaaactgtgactggaatgggcatgatgcagaatcaggggcttctgga 597 Query: 618 cataaaaggcaggccataaactgttactcagggtgcccatcatcagcagagctttcgaga 677 ||||||||||| ||||||||||| |||||||||||||||||||| ||||||||||||||| Sbjct: 598 cataaaaggcaagccataaactgctactcagggtgcccatcatctgcagagctttcgaga 657 Query: 678 atctggtcatttattaccgatatcccgactgtagcagctgagcccaactatgaggatgga 737 ||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||| Sbjct: 658 atctggtcatttattactgatatcccgactgtagcagctgagcccgactatgaggatgga 717 Query: 738 ctaagcatgatgacaattgatgacaagtgatgtgactaatcatcacg 784 |||||||||||||||||||||| |||||||| ||||||| ||||| Sbjct: 718 ctaagcatgatgacaattgatg-ggagtgatgttactaatcgtcacg 763 >gi|71424139|gb|DR806251.1|DR806251 ZM_BFb0032B12.r ZM_BFb Zea mays cDNA 5', mRNA sequence Length = 891 Score = 1072 bits (541), Expect = 0.0 Identities = 694/745 (93%), Gaps = 8/745 (1%) Strand = Plus / Plus Query: 85 aaacctcctcctagtcctcctctcgcagaaggaggctgtgnnnnnnncttcatcggcgcg 144 ||||||||||||||||||| |||||||||||||||||| ||||||||| ||| Sbjct: 1 aaacctcctcctagtcctc---tcgcagaaggaggctgtgttctttccttcatcggtgcg 57 Query: 145 gcaacagcgaaagcttctcggtc----tctcccaccgctgctccgccgtttgggtggttc 200 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 58 gcaacagcgaaagcttctcggtcgatctctcccaccgctgctccgccgtttgggtggttc 117 Query: 201 cgcgccttggccgcgcgggttggatccgagctccgtgcagcagctccgccgcgatacgta 260 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118 cgcgccttggccgcgcgggttggatccgagctccgtgcagcagctccgccgcgatacgta 177 Query: 261 tcgcataggattccactggatccagctgctgaacggggtaccagaaggtggatttggtag 320 ||||||||||||||||||||| |||||||||| | |||||| ||||||||||||| || Sbjct: 178 tcgcataggattccactggattcagctgctgagcagggtactggaaggtggatttgatac 237 Query: 321 tagcactgaacagcgagtggaatttctctaatactgtccaggatcatggttcctctctgt 380 |||| ||||||||| ||| ||||||||| |||||||||||||||||||| | |||||||| Sbjct: 238 tagctctgaacagccagtagaatttctcaaatactgtccaggatcatggcttctctctgt 297 Query: 381 ggtttctgtgggaaacaaaggtcaatgatctactgcagatcggatgcggcatcattgtgc 440 | ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 298 gatttctgtgggaaacaaaggtcaatgatctactgcagatcagatgcggcatcattgtgc 357 Query: 441 ttatcatgcgaccgtagcgttcattcagctaatgcactgtctcggcgtcatagaaggacc 500 |||||||||||||||| |||||||||||||||||||||||||| ||||||| ||||||| Sbjct: 358 ttatcatgcgaccgtaatgttcattcagctaatgcactgtctcgacgtcatacaaggacc 417 Query: 501 cttctttgtgatcgttgtggtttacagcctgcatcagtccgatgtcttgaggacaacaca 560 |||||||||||||||||||||| |||||||||||||||||||||||||||||||||| || Sbjct: 418 cttctttgtgatcgttgtggttcacagcctgcatcagtccgatgtcttgaggacaacgca 477 Query: 561 tcactttgccaaaactgtgattggaatgggcatgatgcagcatcaggggcttctgggcat 620 |||||||||||||||||||| ||||||||||||||||||| ||||||||||||||| ||| Sbjct: 478 tcactttgccaaaactgtgactggaatgggcatgatgcagaatcaggggcttctggacat 537 Query: 621 aaaaggcaggccataaactgttactcagggtgcccatcatcagcagagctttcgagaatc 680 |||||||| ||||||||||| |||||||||||||||||||| |||||||||||||||||| Sbjct: 538 aaaaggcaagccataaactgctactcagggtgcccatcatctgcagagctttcgagaatc 597 Query: 681 tggtcatttattaccgatatcccgactgtagcagctgagcccaactatgaggatggacta 740 |||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 598 tggtcatttattactgatatcccgactgtagcagctgagcccgactatgaggatggacta 657 Query: 741 agcatgatgacaattgatgacaagtgatgtgactaatcatcacggtgcttcagatgataa 800 ||||||||||||||||||| | |||||||| ||||||| ||||| | ||||||||||||| Sbjct: 658 agcatgatgacaattgatggc-agtgatgttactaatcgtcacgatacttcagatgataa 716 Query: 801 acgattgttggaaatagctaacaca 825 | ||||||||||||||||||||||| Sbjct: 717 aagattgttggaaatagctaacaca 741 >gi|71323377|gb|DR798339.1|DR798339 ZM_BFb0020N04.r ZM_BFb Zea mays cDNA 5', mRNA sequence Length = 761 Score = 1057 bits (533), Expect = 0.0 Identities = 590/608 (97%), Gaps = 7/608 (1%) Strand = Plus / Plus Query: 218 ggttggatccgagctccgtgcagcagctccgccgcgatacgtatcgcataggattccact 277 |||||||||||||||| |||||| ||| ||||||||| ||| | | |||||||| Sbjct: 113 ggttggatccgagctctgtgcagaagcgccgccgcgacacgg------tcgaattccact 166 Query: 278 ggatccagctgctgaacggggtaccagaaggtggatttggtagtagcactgaacagcgag 337 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 167 ggatccagctgctgaacggggtaccagaaggtggatttggtagtagcactgaacagcgag 226 Query: 338 tggaatttctctaatactgtccaggatcatggttcctctctgtggtttctgtgggaaaca 397 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 227 tggaatttctctaatactgtccaggatcatggttcctctctgtggtttctgtgggaaaca 286 Query: 398 aaggtcaatgatctactgcagatcggatgcggcatcattgtgcttatcatgcgaccgtag 457 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 287 aaggtcaatgatctactgcagatcggatgcggcatcattgtgcttatcatgcgaccgtag 346 Query: 458 cgttcattcagctaatgcactgtctcggcgtcatagaaggacccttctttgtgatcgttg 517 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 347 cgttcattcagctaatgcactgtctcggcgtcatagaaggacccttctttgtgatcgttg 406 Query: 518 tggtttacagcctgcatcagtccgatgtcttgaggacaacacatcactttgccaaaactg 577 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 407 tggtttacagcctgcatcagtccgatgtcttgaggacaacacatcactttgccaaaactg 466 Query: 578 tgattggaatgggcatgatgcagcatcaggggcttctgggcataaaaggcaggccataaa 637 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 467 tgattggaatgggcatgatgcagcatcaggggcttctgggcataaaaggcaggccataaa 526 Query: 638 ctgttactcagggtgcccatcatcagcagagctttcgagaatctggtcatttattaccga 697 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 527 ctgttactcagggtgcccatcatcagcagagctttcgagaatctggtcatttattatcga 586 Query: 698 tatcccgactgtagcagctgagcccaactatgaggatggactaagcatgatgacaattga 757 ||||||||||||||| ||||||||||||| ||||||||| |||||||||||||||||||| Sbjct: 587 tatcccgactgtagctgctgagcccaactgtgaggatgggctaagcatgatgacaattga 646 Query: 758 tgacaagtgatgtgactaatcatcacggtgcttcagatgataaacgattgttggaaatag 817 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 647 tgac-agtgatgtgactaatcatcacggtgcttcagatgataaacgattgttggaaatag 705 Query: 818 ctaacaca 825 |||||||| Sbjct: 706 ctaacaca 713 Score = 77.8 bits (39), Expect = 2e-12 Identities = 48/51 (94%) Strand = Plus / Plus Query: 138 cggcgcggcaacagcgaaagcttctcggtctctcccaccgctgctccgccg 188 ||||||||||||||||||||||||||| |||||| | |||||||||||||| Sbjct: 19 cggcgcggcaacagcgaaagcttctcgatctctctccccgctgctccgccg 69 >gi|76280920|gb|DV020488.1|DV020488 ZM_BFb0138N11.r ZM_BFb Zea mays cDNA 5', mRNA sequence Length = 835 Score = 1057 bits (533), Expect = 0.0 Identities = 590/608 (97%), Gaps = 7/608 (1%) Strand = Plus / Plus Query: 218 ggttggatccgagctccgtgcagcagctccgccgcgatacgtatcgcataggattccact 277 |||||||||||||||| |||||| ||| ||||||||| ||| | | |||||||| Sbjct: 87 ggttggatccgagctctgtgcagaagcgccgccgcgacacgg------tcgaattccact 140 Query: 278 ggatccagctgctgaacggggtaccagaaggtggatttggtagtagcactgaacagcgag 337 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141 ggatccagctgctgaacggggtaccagaaggtggatttggtagtagcactgaacagcgag 200 Query: 338 tggaatttctctaatactgtccaggatcatggttcctctctgtggtttctgtgggaaaca 397 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 201 tggaatttctctaatactgtccaggatcatggttcctctctgtggtttctgtgggaaaca 260 Query: 398 aaggtcaatgatctactgcagatcggatgcggcatcattgtgcttatcatgcgaccgtag 457 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 261 aaggtcaatgatctactgcagatcggatgcggcatcattgtgcttatcatgcgaccgtag 320 Query: 458 cgttcattcagctaatgcactgtctcggcgtcatagaaggacccttctttgtgatcgttg 517 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 321 cgttcattcagctaatgcactgtctcggcgtcatagaaggacccttctttgtgatcgttg 380 Query: 518 tggtttacagcctgcatcagtccgatgtcttgaggacaacacatcactttgccaaaactg 577 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 381 tggtttacagcctgcatcagtccgatgtcttgaggacaacacatcactttgccaaaactg 440 Query: 578 tgattggaatgggcatgatgcagcatcaggggcttctgggcataaaaggcaggccataaa 637 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 441 tgattggaatgggcatgatgcagcatcaggggcttctgggcataaaaggcaggccataaa 500 Query: 638 ctgttactcagggtgcccatcatcagcagagctttcgagaatctggtcatttattaccga 697 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 501 ctgttactcagggtgcccatcatcagcagagctttcgagaatctggtcatttattatcga 560 Query: 698 tatcccgactgtagcagctgagcccaactatgaggatggactaagcatgatgacaattga 757 ||||||||||||||| ||||||||||||| ||||||||| |||||||||||||||||||| Sbjct: 561 tatcccgactgtagctgctgagcccaactgtgaggatgggctaagcatgatgacaattga 620 Query: 758 tgacaagtgatgtgactaatcatcacggtgcttcagatgataaacgattgttggaaatag 817 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 621 tgac-agtgatgtgactaatcatcacggtgcttcagatgataaacgattgttggaaatag 679 Query: 818 ctaacaca 825 |||||||| Sbjct: 680 ctaacaca 687 Score = 61.9 bits (31), Expect = 1e-07 Identities = 40/43 (93%) Strand = Plus / Plus Query: 146 caacagcgaaagcttctcggtctctcccaccgctgctccgccg 188 ||||||||||||||||||| |||||| | |||||||||||||| Sbjct: 1 caacagcgaaagcttctcgatctctctccccgctgctccgccg 43 >gi|71435278|gb|DR816328.1|DR816328 ZM_BFb0047I04.r ZM_BFb Zea mays cDNA 5', mRNA sequence Length = 709 Score = 1041 bits (525), Expect = 0.0 Identities = 653/697 (93%), Gaps = 7/697 (1%) Strand = Plus / Plus Query: 52 gagacccgacccctgctcgacgacgtgctggcaaaacctcctcctagtcctcctctcgca 111 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 16 gagacccgacccctgctcgacgacgtgctggcaaaacctcctcctagtcctc---tcgca 72 Query: 112 gaaggaggctgtgnnnnnnncttcatcggcgcggcaacagcgaaagcttctcggtc---- 167 ||||||||||||| ||||||||| |||||||||||||||||||||||||| Sbjct: 73 gaaggaggctgtgttctttccttcatcggtgcggcaacagcgaaagcttctcggtcgatc 132 Query: 168 tctcccaccgctgctccgccgtttgggtggttccgcgccttggccgcgcgggttggatcc 227 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133 tctcccaccgctgctccgccgtttgggtggttccgcgccttggccgcgcgggttggatcc 192 Query: 228 gagctccgtgcagcagctccgccgcgatacgtatcgcataggattccactggatccagct 287 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 193 gagctccgtgcagcagctccgccgcgatacgtatcgcataggattccactggattcagct 252 Query: 288 gctgaacggggtaccagaaggtggatttggtagtagcactgaacagcgagtggaatttct 347 ||||| | |||||| ||||||||||||| || |||| ||||||||| ||| |||||||| Sbjct: 253 gctgagcagggtactggaaggtggatttgatactagctctgaacagccagtagaatttct 312 Query: 348 ctaatactgtccaggatcatggttcctctctgtggtttctgtgggaaacaaaggtcaatg 407 | |||||||||||||||||||| | ||||||||| ||||||||||||||||||||||||| Sbjct: 313 caaatactgtccaggatcatggcttctctctgtgatttctgtgggaaacaaaggtcaatg 372 Query: 408 atctactgcagatcggatgcggcatcattgtgcttatcatgcgaccgtagcgttcattca 467 |||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 373 atctactgcagatcagatgcggcatcattgtgcttatcatgcgaccgtaatgttcattca 432 Query: 468 gctaatgcactgtctcggcgtcatagaaggacccttctttgtgatcgttgtggtttacag 527 ||||||||||||||||| ||||||| ||||||||||||||||||||||||||||| |||| Sbjct: 433 gctaatgcactgtctcgacgtcatacaaggacccttctttgtgatcgttgtggttcacag 492 Query: 528 cctgcatcagtccgatgtcttgaggacaacacatcactttgccaaaactgtgattggaat 587 |||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||| Sbjct: 493 cctgcatcagtccgatgtcttgaggacaacgcatcactttgccaaaactgtgactggaat 552 Query: 588 gggcatgatgcagcatcaggggcttctgggcataaaaggcaggccataaactgttactca 647 ||||||||||||| ||||||||||||||| ||||||||||| ||||||||||| |||||| Sbjct: 553 gggcatgatgcagaatcaggggcttctggacataaaaggcaagccataaactgctactca 612 Query: 648 gggtgcccatcatcagcagagctttcgagaatctggtcatttattaccgatatcccgact 707 |||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 613 gggtgcccatcatctgcagagctttcgagaatctggtcatttattactgatatcccgact 672 Query: 708 gtagcagctgagcccaactatgaggatggactaagca 744 ||||||||||||||| ||||||||||||||||||||| Sbjct: 673 gtagcagctgagcccgactatgaggatggactaagca 709 >gi|74238806|gb|DT646720.1|DT646720 ZM_BFb0107F18.r ZM_BFb Zea mays cDNA 5', mRNA sequence Length = 673 Score = 999 bits (504), Expect = 0.0 Identities = 629/669 (94%), Gaps = 5/669 (0%) Strand = Plus / Plus Query: 132 cttcatcggcgcggcaacagcgaaagcttctcggtc----tctcccaccgctgctccgcc 187 ||||||||| |||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 6 cttcatcggtgcggcaacagcgaaagcttctcggtcgatctctcccaccgctgctccgcc 65 Query: 188 gtttgggtggttccgcgccttggccgcgcgggttggatccgagctccgtgcagcagctcc 247 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 66 gtttgggtggttccgcgccttggccgcgcgggttggatccgagctccgtgcagcagctcc 125 Query: 248 gccgcgatacgtatcgcataggattccactggatccagctgctgaacggggtaccagaag 307 |||||||||||||||||||||||||||||||||| |||||||||| | |||||| |||| Sbjct: 126 gccgcgatacgtatcgcataggattccactggattcagctgctgagcagggtactggaag 185 Query: 308 gtggatttggtagtagcactgaacagcgagtggaatttctctaatactgtccaggatcat 367 ||||||||| || |||| ||||||||| ||| ||||||||| |||||||||||||||||| Sbjct: 186 gtggatttgatactagctctgaacagccagtagaatttctcaaatactgtccaggatcat 245 Query: 368 ggttcctctctgtggtttctgtgggaaacaaaggtcaatgatctactgcagatcggatgc 427 || | ||||||||| ||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 246 ggcttctctctgtgatttctgtgggaaacaaaggtcaatgatctactgcagatcagatgc 305 Query: 428 ggcatcattgtgcttatcatgcgaccgtagcgttcattcagctaatgcactgtctcggcg 487 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || Sbjct: 306 ggcatcattgtgcttatcatgcgaccgtaatgttcattcagctaatgcactgtctcgacg 365 Query: 488 tcatagaaggacccttctttgtgatcgttgtggtttacagcctgcatcagtccgatgtct 547 ||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 366 tcatacaaggacccttctttgtgatcgttgtggttcacagcctgcatcagtccgatgtct 425 Query: 548 tgaggacaacacatcactttgccaaaactgtgattggaatgggcatgatgcagcatcagg 607 |||||||||| |||||||||||||||||||||| ||||||||||||||||||| |||||| Sbjct: 426 tgaggacaacgcatcactttgccaaaactgtgactggaatgggcatgatgcagaatcagg 485 Query: 608 ggcttctgggcataaaaggcaggccataaactgttactcagggtgcccatcatcagcaga 667 ||||||||| ||||||||||| ||||||||||| |||||||||||||||||||| ||||| Sbjct: 486 ggcttctggacataaaaggcaagccataaactgctactcagggtgcccatcatctgcaga 545 Query: 668 gctttcgagaatctggtcatttattaccgatatcccgactgtagcagctgagcccaacta 727 ||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||| Sbjct: 546 gctttcgagaatctggtcatttattactgatatcccgactgtagcagctgagcccgacta 605 Query: 728 tgaggatggactaagcatgatgacaattgatgacaagtgatgtgactaatcatcacggtg 787 |||||||||||||||||||||||||||||||| | |||||||| ||||||| ||||| | Sbjct: 606 tgaggatggactaagcatgatgacaattgatggc-agtgatgttactaatcgtcacgata 664 Query: 788 cttcagatg 796 ||||||||| Sbjct: 665 cttcagatg 673 >gi|13382348|gb|BG459023.1|BG459023 947052H08.y1 947 - 2 week shoot from Barkan lab Zea mays cDNA, mRNA sequence Length = 506 Score = 971 bits (490), Expect = 0.0 Identities = 502/506 (99%) Strand = Plus / Plus Query: 320 gtagcactgaacagcgagtggaatttctctaatactgtccaggatcatggttcctctctg 379 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 gtagcactgaacagcgagtggaatttctctaatactgtccaggatcatggttcctctctg 60 Query: 380 tggtttctgtgggaaacaaaggtcaatgatctactgcagatcggatgcggcatcattgtg 439 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 tggtttctgtgggaaacaaaggtcaatgatctactgcagatcggatgcggcatcattgtg 120 Query: 440 cttatcatgcgaccgtagcgttcattcagctaatgcactgtctcggcgtcatagaaggac 499 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 cttatcatgcgaccgtagcgttcattcagctaatgcactgtctcggcgtcatagaaggac 180 Query: 500 ccttctttgtgatcgttgtggtttacagcctgcatcagtccgatgtcttgaggacaacac 559 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 ccttctttgtgatcgttgtggtttacagcctgcatcagtccgatgtcttgaggacaacac 240 Query: 560 atcactttgccaaaactgtgattggaatgggcatgatgcagcatcaggggcttctgggca 619 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 atcactttgccaaaactgtgattggaatgggcatgatgcagcatcaggggcttctgggca 300 Query: 620 taaaaggcaggccataaactgttactcagggtgcccatcatcagcagagctttcgagaat 679 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 taaaaggcaggccataaactgttactcagggtgcccatcatcagcagagctttcgagaat 360 Query: 680 ctggtcatttattaccgatatcccgactgtagcagctgagcccaactatgaggatggact 739 |||||||||||||| |||||||||||||||||| ||||||||||||| ||||||||| || Sbjct: 361 ctggtcatttattatcgatatcccgactgtagctgctgagcccaactgtgaggatgggct 420 Query: 740 aagcatgatgacaattgatgacaagtgatgtgactaatcatcacggtgcttcagatgata 799 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 421 aagcatgatgacaattgatgacaagtgatgtgactaatcatcacggtgcttcagatgata 480 Query: 800 aacgattgttggaaatagctaacaca 825 |||||||||||||||||||||||||| Sbjct: 481 aacgattgttggaaatagctaacaca 506 >gi|71439538|gb|DR820588.1|DR820588 ZM_BFb0059C10.r ZM_BFb Zea mays cDNA 5', mRNA sequence Length = 815 Score = 961 bits (485), Expect = 0.0 Identities = 542/560 (96%), Gaps = 7/560 (1%) Strand = Plus / Plus Query: 218 ggttggatccgagctccgtgcagcagctccgccgcgatacgtatcgcataggattccact 277 |||||||||||||||| |||||| ||| ||||||||| ||| | | |||||||| Sbjct: 263 ggttggatccgagctctgtgcagaagcgccgccgcgacacgg------tcgaattccact 316 Query: 278 ggatccagctgctgaacggggtaccagaaggtggatttggtagtagcactgaacagcgag 337 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 317 ggatccagctgctgaacggggtaccagaaggtggatttggtagtagcactgaacagcgag 376 Query: 338 tggaatttctctaatactgtccaggatcatggttcctctctgtggtttctgtgggaaaca 397 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 377 tggaatttctctaatactgtccaggatcatggttcctctctgtggtttctgtgggaaaca 436 Query: 398 aaggtcaatgatctactgcagatcggatgcggcatcattgtgcttatcatgcgaccgtag 457 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 437 aaggtcaatgatctactgcagatcggatgcggcatcattgtgcttatcatgcgaccgtag 496 Query: 458 cgttcattcagctaatgcactgtctcggcgtcatagaaggacccttctttgtgatcgttg 517 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 497 cgttcattcagctaatgcactgtctcggcgtcatagaaggacccttctttgtgatcgttg 556 Query: 518 tggtttacagcctgcatcagtccgatgtcttgaggacaacacatcactttgccaaaactg 577 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 557 tggtttacagcctgcatcagtccgatgtcttgaggacaacacatcactttgccaaaactg 616 Query: 578 tgattggaatgggcatgatgcagcatcaggggcttctgggcataaaaggcaggccataaa 637 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 617 tgattggaatgggcatgatgcagcatcaggggcttctgggcataaaaggcaggccataaa 676 Query: 638 ctgttactcagggtgcccatcatcagcagagctttcgagaatctggtcatttattaccga 697 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 677 ctgttactcagggtgcccatcatcagcagagctttcgagaatctggtcatttattatcga 736 Query: 698 tatcccgactgtagcagctgagcccaactatgaggatggactaagcatgatgacaattga 757 ||||||||||||||| ||||||||||||| ||||||||| |||||||||||||||||||| Sbjct: 737 tatcccgactgtagctgctgagcccaactgtgaggatgggctaagcatgatgacaattga 796 Query: 758 tgacaagtgatgtgactaat 777 |||| ||||||||||||||| Sbjct: 797 tgac-agtgatgtgactaat 815 Score = 77.8 bits (39), Expect = 2e-12 Identities = 48/51 (94%) Strand = Plus / Plus Query: 138 cggcgcggcaacagcgaaagcttctcggtctctcccaccgctgctccgccg 188 ||||||||||||||||||||||||||| |||||| | |||||||||||||| Sbjct: 169 cggcgcggcaacagcgaaagcttctcgatctctctccccgctgctccgccg 219 Score = 58.0 bits (29), Expect = 2e-06 Identities = 43/47 (91%), Gaps = 3/47 (6%) Strand = Plus / Plus Query: 72 cgacgtgctggcaaaacctcctcctagtcctcctctcgcagaaggag 118 ||||||| ||||||||||||||||||| ||||||||||||||||| Sbjct: 111 cgacgtgttggcaaaacctcctcctag---tcctctcgcagaaggag 154 >gi|31909113|gb|CD650756.1|CD650756 3529_1_129_1_D07.y_2 3529 - 2 mm ear tissue from Schmidt and Hake labs Zea mays cDNA, mRNA sequence Length = 616 Score = 769 bits (388), Expect = 0.0 Identities = 510/553 (92%), Gaps = 8/553 (1%) Strand = Plus / Plus Query: 2 atcgcattctcctcccaccaccaccacaccacgcctcgcttatnnnnnnn-gagacccga 60 ||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 67 atcgcattctcctcccaccaccaccacaccacgcctcgcttatccccccccgagacccga 126 Query: 61 cccctgctcgacgacgtgctggcaaaacctcctcctagtcctcctctcgcagaaggaggc 120 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 127 cccctgctcgacgacgtgctggcaaaacctcctcctagtcctc---tcgcagaaggaggc 183 Query: 121 tgtgnnnnnnncttcatcggcgcggcaacagcgaaagcttctcggtc----tctcccacc 176 |||| ||||||||| |||||||||||||||||||||||||| ||||||||| Sbjct: 184 tgtgttctttccttcatcggtgcggcaacagcgaaagcttctcggtcgatctctcccacc 243 Query: 177 gctgctccgccgtttgggtggttccgcgccttggccgcgcgggttggatccgagctccgt 236 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 244 gctgctccgccgtttgggtggttccgcgccttggccgcgcgggttggatccgagctccgt 303 Query: 237 gcagcagctccgccgcgatacgtatcgcataggattccactggatccagctgctgaacgg 296 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||| | | Sbjct: 304 gcagcagctccgccgcgatacgtatcgcataggattccactggattcagctgctgagcag 363 Query: 297 ggtaccagaaggtggatttggtagtagcactgaacagcgagtggaatttctctaatactg 356 ||||| ||||||||||||| || |||| ||||||||| ||| ||||||||| ||||||| Sbjct: 364 ggtactggaaggtggatttgatactagctctgaacagccagtagaatttctcaaatactg 423 Query: 357 tccaggatcatggttcctctctgtggtttctgtgggaaacaaaggtcaatgatctactgc 416 ||||||||||||| | ||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 424 tccaggatcatggcttctctctgtgatttctgtgggaaacaaaggtcaatgatctactgc 483 Query: 417 agatcggatgcggcatcattgtgcttatcatgcgaccgtagcgttcattcagctaatgca 476 ||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 484 agatcagatgcggcatcattgtgcttatcatgcgaccgtaatgttcattcagctaatgca 543 Query: 477 ctgtctcggcgtcatagaaggacccttctttgtgatcgttgtggtttacagcctgcatca 536 |||||||| ||||||| ||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 544 ctgtctcgacgtcatacaaggacccttctttgtgatcgttgtggttcacagcctgcatca 603 Query: 537 gtccgatgtcttg 549 ||||||||||||| Sbjct: 604 gtccgatgtcttg 616 >gi|13558687|gb|BG550043.1|BG550043 947080F02.y2 947 - 2 week shoot from Barkan lab Zea mays cDNA, mRNA sequence Length = 324 Score = 309 bits (156), Expect = 3e-82 Identities = 203/219 (92%), Gaps = 6/219 (2%) Strand = Plus / Plus Query: 218 ggttggatccgagctccgtgcagcagctccgccgcgatacgtatcgcataggattccact 277 |||||||||||||||| |||||| ||| ||||||||| ||| | | |||||||| Sbjct: 112 ggttggatccgagctctgtgcagaagcgccgccgcgacacgg------tcgaattccact 165 Query: 278 ggatccagctgctgaacggggtaccagaaggtggatttggtagtagcactgaacagcgag 337 |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 166 ggatccagctgctgaacgttgtaccagaaggtggatttggtagtagcactgaacagcgag 225 Query: 338 tggaatttctctaatactgtccaggatcatggttcctctctgtggtttctgtgggaaaca 397 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 226 tggaatttctctaatactgcccaggatcatggttcctctctgtggtttctgtgggaaaca 285 Query: 398 aaggtcaatgatctactgcagatcggatgcggcatcatt 436 ||||||||||||||||||||||||||||||||||||||| Sbjct: 286 aaggtcaatgatctactgcagatcggatgcggcatcatt 324 Score = 77.8 bits (39), Expect = 2e-12 Identities = 48/51 (94%) Strand = Plus / Plus Query: 138 cggcgcggcaacagcgaaagcttctcggtctctcccaccgctgctccgccg 188 ||||||||||||||||||||||||||| |||||| | |||||||||||||| Sbjct: 18 cggcgcggcaacagcgaaagcttctcgatctctctccccgctgctccgccg 68 >gi|92901113|gb|AC185481.1| Zea mays chromosome 4 clone CH201-199E14; ZMMBBc0199E14, *** SEQUENCING IN PROGRESS ***, 17 unordered pieces Length = 175612 Score = 264 bits (133), Expect = 2e-68 Identities = 148/153 (96%) Strand = Plus / Plus Query: 272 tccactggatccagctgctgaacggggtaccagaaggtggatttggtagtagcactgaac 331 ||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 10363 tccactggatcgagctgctgaacggggtaccagaaggtggatttggtactagcactgaac 10422 Query: 332 agcgagtggaatttctctaatactgtccaggatcatggttcctctctgtggtttctgtgg 391 | ||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||| Sbjct: 10423 aacgagtggaatttctctaatactgtctaggatcatggttcctctgtgtggtttctgtgg 10482 Query: 392 gaaacaaaggtcaatgatctactgcagatcgga 424 ||||||||||||||||||||||||||||||||| Sbjct: 10483 gaaacaaaggtcaatgatctactgcagatcgga 10515 >gi|78112618|gb|DV531012.1|DV531012 ZM_BFb0221A03.r ZM_BFb Zea mays cDNA 5', mRNA sequence Length = 838 Score = 115 bits (58), Expect = 9e-24 Identities = 298/378 (78%) Strand = Plus / Plus Query: 373 ctctctgtggtttctgtgggaaacaaaggtcaatgatctactgcagatcggatgcggcat 432 ||||||||| |||||||||| | || ||||| ||| | |||||| |||| ||||| |||| Sbjct: 275 ctctctgtgatttctgtggggagcataggtctatggtttactgccgatcagatgcagcat 334 Query: 433 cattgtgcttatcatgcgaccgtagcgttcattcagctaatgcactgtctcggcgtcata 492 | ||||| |||||||| ||||||| || |||||||||||||| || ||||||||||||| Sbjct: 335 ccttgtgtttatcatgtgaccgtaatgtgcattcagctaatgctctttctcggcgtcata 394 Query: 493 gaaggacccttctttgtgatcgttgtggtttacagcctgcatcagtccgatgtcttgagg 552 |||||| ||| | ||||| || |||| || ||||||||| ||||| ||||| | | Sbjct: 395 caaggacacttttatgtgaccggtgtgcttcacagcctgctatggtccgctgtctagcag 454 Query: 553 acaacacatcactttgccaaaactgtgattggaatgggcatgatgcagcatcaggggctt 612 | || | || ||||||||||| |||||||||||||| || ||||| ||| || Sbjct: 455 aaaatgcctcgctttgccaaaattgtgattggaatggccacattgcaggatcctcatctg 514 Query: 613 ctgggcataaaaggcaggccataaactgttactcagggtgcccatcatcagcagagcttt 672 | || || ||||||||| | ||||| || || ||||| || ||||| || ||||| |||| Sbjct: 515 ccggacacaaaaggcagactataaattgctattcaggatgtccatcgtctgcagaacttt 574 Query: 673 cgagaatctggtcatttattaccgatatcccgactgtagcagctgagcccaactatgagg 732 | ||||| ||||| || || | ||||| || | ||||||| ||||||| |||| |||| Sbjct: 575 ctagaatatggtccttcgtttcagatattcctaatgtagcacctgagccaaactgtgagc 634 Query: 733 atggactaagcatgatga 750 | ||| |||||||||||| Sbjct: 635 aaggaataagcatgatga 652 >gi|78119614|gb|DV537998.1|DV537998 ZM_BFb0231D11.r ZM_BFb Zea mays cDNA 5', mRNA sequence Length = 516 Score = 111 bits (56), Expect = 1e-22 Identities = 134/160 (83%) Strand = Plus / Plus Query: 373 ctctctgtggtttctgtgggaaacaaaggtcaatgatctactgcagatcggatgcggcat 432 ||||||||| |||||||||| | || ||||| ||| | |||||| |||| ||||| |||| Sbjct: 275 ctctctgtgatttctgtggggagcataggtctatggtttactgccgatcagatgcagcat 334 Query: 433 cattgtgcttatcatgcgaccgtagcgttcattcagctaatgcactgtctcggcgtcata 492 | ||||| |||||||| ||||||| || |||||||||||||| || ||||||||||||| Sbjct: 335 ccttgtgtttatcatgtgaccgtaatgtgcattcagctaatgctctttctcggcgtcata 394 Query: 493 gaaggacccttctttgtgatcgttgtggtttacagcctgc 532 |||||| ||| | ||||| || |||| || ||||||||| Sbjct: 395 caaggacacttttatgtgaccggtgtgcttcacagcctgc 434 >gi|88746203|gb|DY530344.1|DY530344 ZM_BFb0248G15.r ZM_BFb Zea mays cDNA 5', mRNA sequence Length = 758 Score = 38.2 bits (19), Expect = 1.7 Identities = 22/23 (95%) Strand = Plus / Plus Query: 7 attctcctcccaccaccaccaca 29 |||| |||||||||||||||||| Sbjct: 89 attcccctcccaccaccaccaca 111 >gi|89249132|gb|DY620918.1|DY620918 ZM_BFb0280L02.f ZM_BFb Zea mays cDNA 3', mRNA sequence Length = 529 Score = 38.2 bits (19), Expect = 1.7 Identities = 19/19 (100%) Strand = Plus / Minus Query: 169 ctcccaccgctgctccgcc 187 ||||||||||||||||||| Sbjct: 355 ctcccaccgctgctccgcc 337 >gi|89758953|gb|DY687934.1|DY687934 ZM_BFb0280L02.r ZM_BFb Zea mays cDNA 5', mRNA sequence Length = 344 Score = 38.2 bits (19), Expect = 1.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 169 ctcccaccgctgctccgcc 187 ||||||||||||||||||| Sbjct: 175 ctcccaccgctgctccgcc 193 >gi|6022050|gb|AW066993.1|AW066993 683012H10.x1 683 - 14 day immature embryo from Hake lab (HS) Zea mays cDNA, mRNA sequence Length = 566 Score = 36.2 bits (18), Expect = 6.8 Identities = 18/18 (100%) Strand = Plus / Plus Query: 19 ccaccaccacaccacgcc 36 |||||||||||||||||| Sbjct: 114 ccaccaccacaccacgcc 131 >gi|6137978|gb|AW134432.1|AW134432 707001E04.x1 707 - Mixed adult tissues from Walbot lab (SK) Zea mays cDNA, mRNA sequence Length = 573 Score = 36.2 bits (18), Expect = 6.8 Identities = 18/18 (100%) Strand = Plus / Minus Query: 11 tcctcccaccaccaccac 28 |||||||||||||||||| Sbjct: 158 tcctcccaccaccaccac 141 >gi|29544077|gb|CB604457.1|CB604457 3529_1_63_1_F05.x_1 3529 - 2 mm ear tissue from Schmidt and Hake labs Zea mays cDNA, mRNA sequence Length = 656 Score = 36.2 bits (18), Expect = 6.8 Identities = 18/18 (100%) Strand = Plus / Plus Query: 11 tcctcccaccaccaccac 28 |||||||||||||||||| Sbjct: 600 tcctcccaccaccaccac 617 >gi|31350065|gb|CD434422.1|CD434422 EL01N0324A02.b Endosperm_3 Zea mays cDNA, mRNA sequence Length = 827 Score = 36.2 bits (18), Expect = 6.8 Identities = 18/18 (100%) Strand = Plus / Minus Query: 11 tcctcccaccaccaccac 28 |||||||||||||||||| Sbjct: 331 tcctcccaccaccaccac 314 >gi|31354533|gb|CD438890.1|CD438890 EL01N0518E09.b Endosperm_5 Zea mays cDNA, mRNA sequence Length = 883 Score = 36.2 bits (18), Expect = 6.8 Identities = 18/18 (100%) Strand = Plus / Minus Query: 296 gggtaccagaaggtggat 313 |||||||||||||||||| Sbjct: 669 gggtaccagaaggtggat 652 >gi|31355190|gb|CD439547.1|CD439547 EL01N0526B10.b Endosperm_5 Zea mays cDNA, mRNA sequence Length = 930 Score = 36.2 bits (18), Expect = 6.8 Identities = 18/18 (100%) Strand = Plus / Minus Query: 296 gggtaccagaaggtggat 313 |||||||||||||||||| Sbjct: 668 gggtaccagaaggtggat 651 >gi|50336406|gb|CO531532.1|CO531532 3530_1_208_1_A05.y_1 3530 - Full length cDNA library created by Invitrogen from multiple tissues Zea mays cDNA, mRNA sequence Length = 504 Score = 36.2 bits (18), Expect = 6.8 Identities = 18/18 (100%) Strand = Plus / Minus Query: 170 tcccaccgctgctccgcc 187 |||||||||||||||||| Sbjct: 461 tcccaccgctgctccgcc 444 >gi|60341470|gb|DN208443.1|DN208443 MEST869_B07.T7-1 UGA-ZmSAM-XZ2 Zea mays cDNA, mRNA sequence Length = 715 Score = 36.2 bits (18), Expect = 6.8 Identities = 18/18 (100%) Strand = Plus / Plus Query: 296 gggtaccagaaggtggat 313 |||||||||||||||||| Sbjct: 646 gggtaccagaaggtggat 663 >gi|71331770|gb|DR802745.1|DR802745 ZM_BFb0027B22.r ZM_BFb Zea mays cDNA 5', mRNA sequence Length = 812 Score = 36.2 bits (18), Expect = 6.8 Identities = 21/22 (95%) Strand = Plus / Plus Query: 7 attctcctcccaccaccaccac 28 |||| ||||||||||||||||| Sbjct: 199 attcccctcccaccaccaccac 220 >gi|71434820|gb|DR815870.1|DR815870 ZM_BFb0046H09.r ZM_BFb Zea mays cDNA 5', mRNA sequence Length = 864 Score = 36.2 bits (18), Expect = 6.8 Identities = 18/18 (100%) Strand = Plus / Minus Query: 170 tcccaccgctgctccgcc 187 |||||||||||||||||| Sbjct: 437 tcccaccgctgctccgcc 420 >gi|71435608|gb|DR816658.1|DR816658 ZM_BFb0048E02.r ZM_BFb Zea mays cDNA 5', mRNA sequence Length = 552 Score = 36.2 bits (18), Expect = 6.8 Identities = 18/18 (100%) Strand = Plus / Minus Query: 170 tcccaccgctgctccgcc 187 |||||||||||||||||| Sbjct: 437 tcccaccgctgctccgcc 420 >gi|71775047|gb|DR972925.1|DR972925 ZM_BFb0096F06.r ZM_BFb Zea mays cDNA 5', mRNA sequence Length = 826 Score = 36.2 bits (18), Expect = 6.8 Identities = 18/18 (100%) Strand = Plus / Minus Query: 170 tcccaccgctgctccgcc 187 |||||||||||||||||| Sbjct: 452 tcccaccgctgctccgcc 435 >gi|74233581|gb|DT641495.1|DT641495 ZM_BFb0099J07.r ZM_BFb Zea mays cDNA 5', mRNA sequence Length = 826 Score = 36.2 bits (18), Expect = 6.8 Identities = 18/18 (100%) Strand = Plus / Plus Query: 10 ctcctcccaccaccacca 27 |||||||||||||||||| Sbjct: 42 ctcctcccaccaccacca 59 >gi|76011911|gb|DT939081.1|DT939081 ZM_BFb0120M23.r ZM_BFb Zea mays cDNA 5', mRNA sequence Length = 729 Score = 36.2 bits (18), Expect = 6.8 Identities = 18/18 (100%) Strand = Plus / Minus Query: 170 tcccaccgctgctccgcc 187 |||||||||||||||||| Sbjct: 459 tcccaccgctgctccgcc 442 >gi|76282126|gb|DV021694.1|DV021694 ZM_BFb0140I21.r ZM_BFb Zea mays cDNA 5', mRNA sequence Length = 571 Score = 36.2 bits (18), Expect = 6.8 Identities = 18/18 (100%) Strand = Plus / Minus Query: 170 tcccaccgctgctccgcc 187 |||||||||||||||||| Sbjct: 305 tcccaccgctgctccgcc 288 >gi|76283439|gb|DV023007.1|DV023007 ZM_BFb0142H03.f ZM_BFb Zea mays cDNA 3', mRNA sequence Length = 421 Score = 36.2 bits (18), Expect = 6.8 Identities = 18/18 (100%) Strand = Plus / Minus Query: 170 tcccaccgctgctccgcc 187 |||||||||||||||||| Sbjct: 354 tcccaccgctgctccgcc 337 >gi|76925800|gb|DV170600.1|DV170600 ZM_BFb0170E03.r ZM_BFb Zea mays cDNA 5', mRNA sequence Length = 860 Score = 36.2 bits (18), Expect = 6.8 Identities = 18/18 (100%) Strand = Plus / Minus Query: 170 tcccaccgctgctccgcc 187 |||||||||||||||||| Sbjct: 433 tcccaccgctgctccgcc 416 >gi|76935253|gb|DV174266.1|DV174266 ZM_BFb0177M14.r ZM_BFb Zea mays cDNA 5', mRNA sequence Length = 819 Score = 36.2 bits (18), Expect = 6.8 Identities = 18/18 (100%) Strand = Plus / Minus Query: 170 tcccaccgctgctccgcc 187 |||||||||||||||||| Sbjct: 187 tcccaccgctgctccgcc 170 >gi|78023566|gb|DV491953.1|DV491953 1000221-B12.T7-1 UGI-Reseq Zea mays cDNA, mRNA sequence Length = 358 Score = 36.2 bits (18), Expect = 6.8 Identities = 18/18 (100%) Strand = Plus / Plus Query: 19 ccaccaccacaccacgcc 36 |||||||||||||||||| Sbjct: 114 ccaccaccacaccacgcc 131 >gi|78084518|gb|DV512911.1|DV512911 ZM_BFb0193M19.r ZM_BFb Zea mays cDNA 5', mRNA sequence Length = 780 Score = 36.2 bits (18), Expect = 6.8 Identities = 18/18 (100%) Strand = Plus / Minus Query: 170 tcccaccgctgctccgcc 187 |||||||||||||||||| Sbjct: 482 tcccaccgctgctccgcc 465 >gi|78180802|gb|DV551175.1|DV551175 1000063-A06.GAD10-F UGI-Reseq Zea mays cDNA, mRNA sequence Length = 667 Score = 36.2 bits (18), Expect = 6.8 Identities = 18/18 (100%) Strand = Plus / Minus Query: 11 tcctcccaccaccaccac 28 |||||||||||||||||| Sbjct: 545 tcctcccaccaccaccac 528 >gi|86471279|gb|DY237649.1|DY237649 ZM_BFb0254O17.r ZM_BFb Zea mays cDNA 5', mRNA sequence Length = 397 Score = 36.2 bits (18), Expect = 6.8 Identities = 18/18 (100%) Strand = Plus / Plus Query: 10 ctcctcccaccaccacca 27 |||||||||||||||||| Sbjct: 39 ctcctcccaccaccacca 56 >gi|87156776|gb|DY401565.1|DY401565 V-946-3B-B07.Gal4-R UGV-Reseq Zea mays cDNA, mRNA sequence Length = 755 Score = 36.2 bits (18), Expect = 6.8 Identities = 18/18 (100%) Strand = Plus / Minus Query: 11 tcctcccaccaccaccac 28 |||||||||||||||||| Sbjct: 733 tcctcccaccaccaccac 716 >gi|91052674|gb|EB163092.1|EB163092 ZM_BFb0303O01.f ZM_BFb Zea mays cDNA 3', mRNA sequence Length = 620 Score = 36.2 bits (18), Expect = 6.8 Identities = 18/18 (100%) Strand = Plus / Plus Query: 11 tcctcccaccaccaccac 28 |||||||||||||||||| Sbjct: 319 tcctcccaccaccaccac 336 >gi|91055728|gb|EB166146.1|EB166146 ZM_BFb0345J08.r ZM_BFb Zea mays cDNA 5', mRNA sequence Length = 797 Score = 36.2 bits (18), Expect = 6.8 Identities = 18/18 (100%) Strand = Plus / Minus Query: 170 tcccaccgctgctccgcc 187 |||||||||||||||||| Sbjct: 475 tcccaccgctgctccgcc 458 >gi|91875382|gb|EB405339.1|EB405339 ZM_BFb0315E24.r ZM_BFb Zea mays cDNA 5', mRNA sequence Length = 712 Score = 36.2 bits (18), Expect = 6.8 Identities = 18/18 (100%) Strand = Plus / Minus Query: 170 tcccaccgctgctccgcc 187 |||||||||||||||||| Sbjct: 405 tcccaccgctgctccgcc 388 >gi|54651241|gb|BT016460.1| Zea mays clone Contig293 mRNA sequence Length = 1428 Score = 36.2 bits (18), Expect = 6.8 Identities = 18/18 (100%) Strand = Plus / Minus Query: 296 gggtaccagaaggtggat 313 |||||||||||||||||| Sbjct: 669 gggtaccagaaggtggat 652 >gi|54652135|gb|BT017354.1| Zea mays clone EL01N0324A02.c mRNA sequence Length = 1181 Score = 36.2 bits (18), Expect = 6.8 Identities = 18/18 (100%) Strand = Plus / Minus Query: 11 tcctcccaccaccaccac 28 |||||||||||||||||| Sbjct: 331 tcctcccaccaccaccac 314 >gi|21208236|gb|AY105158.1| Zea mays PCO107789 mRNA sequence Length = 1347 Score = 36.2 bits (18), Expect = 6.8 Identities = 18/18 (100%) Strand = Plus / Minus Query: 11 tcctcccaccaccaccac 28 |||||||||||||||||| Sbjct: 533 tcctcccaccaccaccac 516 >gi|54652135|gb|BT017354.1| Zea mays clone EL01N0324A02.c mRNA sequence Length = 1181 Score = 36.2 bits (18), Expect = 6.8 Identities = 18/18 (100%) Strand = Plus / Minus Query: 11 tcctcccaccaccaccac 28 |||||||||||||||||| Sbjct: 331 tcctcccaccaccaccac 314 >gi|54651241|gb|BT016460.1| Zea mays clone Contig293 mRNA sequence Length = 1428 Score = 36.2 bits (18), Expect = 6.8 Identities = 18/18 (100%) Strand = Plus / Minus Query: 296 gggtaccagaaggtggat 313 |||||||||||||||||| Sbjct: 669 gggtaccagaaggtggat 652 >gi|21208236|gb|AY105158.1| Zea mays PCO107789 mRNA sequence Length = 1347 Score = 36.2 bits (18), Expect = 6.8 Identities = 18/18 (100%) Strand = Plus / Minus Query: 11 tcctcccaccaccaccac 28 |||||||||||||||||| Sbjct: 533 tcctcccaccaccaccac 516 >gi|9858872|gb|AF289237.1|AF289237 Zea mays calcium/calmodulin dependent protein kinase MCK2 (MCK2) gene, complete cds Length = 7359 Score = 36.2 bits (18), Expect = 6.8 Identities = 18/18 (100%) Strand = Plus / Minus Query: 271 ttccactggatccagctg 288 |||||||||||||||||| Sbjct: 2346 ttccactggatccagctg 2329 >gi|92900909|gb|AC185476.1| Zea mays chromosome 4 clone CH201-216J18; ZMMBBc0216J18, *** SEQUENCING IN PROGRESS ***, 19 unordered pieces Length = 169065 Score = 36.2 bits (18), Expect = 6.8 Identities = 18/18 (100%) Strand = Plus / Plus Query: 296 gggtaccagaaggtggat 313 |||||||||||||||||| Sbjct: 39064 gggtaccagaaggtggat 39081 >gi|92110165|gb|AC185302.1| Zea mays chromosome UNK clone CH201-422E5; ZMMBBc0422E05, *** SEQUENCING IN PROGRESS ***, 23 unordered pieces Length = 177170 Score = 36.2 bits (18), Expect = 6.8 Identities = 18/18 (100%) Strand = Plus / Plus Query: 16 ccaccaccaccacaccac 33 |||||||||||||||||| Sbjct: 29905 ccaccaccaccacaccac 29922 >gi|90963040|gb|AC184168.1| Zea mays chromosome UNK clone ZMMBBb-167A4; ZMMBBb0167A04, *** SEQUENCING IN PROGRESS ***, 14 unordered pieces Length = 130346 Score = 36.2 bits (18), Expect = 6.8 Identities = 18/18 (100%) Strand = Plus / Minus Query: 373 ctctctgtggtttctgtg 390 |||||||||||||||||| Sbjct: 14991 ctctctgtggtttctgtg 14974 >gi|88687857|gb|AC182824.1| Zea mays chromosome UNK clone CH201-257I6, *** SEQUENCING IN PROGRESS ***, 15 unordered pieces Length = 154051 Score = 36.2 bits (18), Expect = 6.8 Identities = 18/18 (100%) Strand = Plus / Plus Query: 373 ctctctgtggtttctgtg 390 |||||||||||||||||| Sbjct: 39580 ctctctgtggtttctgtg 39597 >gi|58082448|gb|AC155589.2| Zea mays strain B73 clone ZMMBBc0200O20, *** SEQUENCING IN PROGRESS ***, 23 unordered pieces Length = 170072 Score = 36.2 bits (18), Expect = 6.8 Identities = 18/18 (100%) Strand = Plus / Plus Query: 373 ctctctgtggtttctgtg 390 |||||||||||||||||| Sbjct: 163041 ctctctgtggtttctgtg 163058 >gi|58082437|gb|AC155578.2| Zea mays strain B73 clone ZMMBBc0190D10, *** SEQUENCING IN PROGRESS ***, 34 unordered pieces Length = 193326 Score = 36.2 bits (18), Expect = 6.8 Identities = 18/18 (100%) Strand = Plus / Minus Query: 16 ccaccaccaccacaccac 33 |||||||||||||||||| Sbjct: 175777 ccaccaccaccacaccac 175760 >gi|58082329|gb|AC155468.2| Zea mays strain B73 clone ZMMBBb0530P04, *** SEQUENCING IN PROGRESS ***, 10 unordered pieces Length = 113669 Score = 36.2 bits (18), Expect = 6.8 Identities = 18/18 (100%) Strand = Plus / Minus Query: 373 ctctctgtggtttctgtg 390 |||||||||||||||||| Sbjct: 26322 ctctctgtggtttctgtg 26305 Score = 36.2 bits (18), Expect = 6.8 Identities = 18/18 (100%) Strand = Plus / Minus Query: 373 ctctctgtggtttctgtg 390 |||||||||||||||||| Sbjct: 18674 ctctctgtggtttctgtg 18657 >gi|58082326|gb|AC155465.2| Zea mays strain B73 clone ZMMBBb0518K03, *** SEQUENCING IN PROGRESS ***, 20 unordered pieces Length = 173237 Score = 36.2 bits (18), Expect = 6.8 Identities = 18/18 (100%) Strand = Plus / Plus Query: 373 ctctctgtggtttctgtg 390 |||||||||||||||||| Sbjct: 163728 ctctctgtggtttctgtg 163745 Score = 36.2 bits (18), Expect = 6.8 Identities = 18/18 (100%) Strand = Plus / Plus Query: 373 ctctctgtggtttctgtg 390 |||||||||||||||||| Sbjct: 22237 ctctctgtggtttctgtg 22254 >gi|58082283|gb|AC155421.2| Zea mays strain B73 clone ZMMBBb0216P16, *** SEQUENCING IN PROGRESS ***, 18 unordered pieces Length = 121968 Score = 36.2 bits (18), Expect = 6.8 Identities = 18/18 (100%) Strand = Plus / Plus Query: 16 ccaccaccaccacaccac 33 |||||||||||||||||| Sbjct: 79302 ccaccaccaccacaccac 79319 Database: mais_NCBI.fasta Posted date: Apr 26, 2006 11:51 AM Number of letters in database: 669,372,029 Number of sequences in database: 836,351 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 313,170 Number of Sequences: 836351 Number of extensions: 313170 Number of successful extensions: 30939 Number of sequences better than 10.0: 61 Number of HSP's better than 10.0 without gapping: 61 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 30744 Number of HSP's gapped (non-prelim): 165 length of query: 825 length of database: 669,372,029 effective HSP length: 19 effective length of query: 806 effective length of database: 653,481,360 effective search space: 526705976160 effective search space used: 526705976160 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 18 (36.2 bits)