BLASTN 2.2.6 [Apr-09-2003] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= 5705280.3.1 (980 letters) Database: mais_NCBI.fasta 836,351 sequences; 669,372,029 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|58082306|gb|AC155445.2| Zea mays strain B73 clone ZMMBBb0297M... 1283 0.0 gi|9731814|gb|BE510566.1|BE510566 946053G10.y1 946 - tassel prim... 1017 0.0 gi|60343215|gb|DN210188.1|DN210188 MEST897_H11.T7-1 UGA-ZmSAM-XZ... 932 0.0 gi|13178481|gb|BG349739.1|BG349739 947030D09.y2 947 - 2 week sho... 884 0.0 gi|13178161|gb|BG349419.1|BG349419 947030D09.y1 947 - 2 week sho... 835 0.0 gi|47081720|gb|BV145617.1| PZA02539-77695-Mo17 Zea mays Mo17 Zea... 460 e-127 gi|47081723|gb|BV145620.1| PZA02539-77696-T218 Zea mays T218 Zea... 450 e-124 gi|47081725|gb|BV145622.1| PZA02539-77687-Tx501 Zea mays Tx501 Z... 444 e-122 gi|47081726|gb|BV145623.1| PZA02539-77699-W22_R-scm2 Zea mays W2... 434 e-120 gi|47081717|gb|BV145614.1| PZA02539-77688-B73 Zea mays B73 Zea m... 434 e-120 gi|47081721|gb|BV145618.1| PZA02539-77700-Mo17 Zea mays Mo17 Zea... 430 e-118 gi|47081718|gb|BV145615.1| PZA02539-77685-CO159 Zea mays CO159 Z... 422 e-116 gi|47081724|gb|BV145621.1| PZA02539-77697-Tx303 Zea mays Tx303 Z... 414 e-114 gi|47081716|gb|BV145613.1| PZA02539-77683-B73 Zea mays B73 Zea m... 414 e-114 gi|47081722|gb|BV145619.1| PZA02539-77686-Mp708 Zea mays Mp708 Z... 404 e-111 gi|47081719|gb|BV145616.1| PZA02539-77684-GT119 Zea mays GT119 Z... 383 e-104 gi|13198603|gb|BG354405.1|BG354405 947036G03.y1 947 - 2 week sho... 38 2.0 gi|50324350|gb|CO519476.1|CO519476 3530_1_128_1_A10.y_1 3530 - F... 38 2.0 gi|50328025|gb|CO523151.1|CO523151 3530_1_153_1_B02.y_1 3530 - F... 38 2.0 gi|76287101|gb|DV026669.1|DV026669 ZM_BFb0147M18.r ZM_BFb Zea ma... 38 2.0 gi|76288014|gb|DV027582.1|DV027582 ZM_BFb0149C01.r ZM_BFb Zea ma... 38 2.0 gi|76910634|gb|DV163957.1|DV163957 ZM_BFb0160D07.r ZM_BFb Zea ma... 38 2.0 gi|78081073|gb|DV509485.1|DV509485 ZM_BFb0188J19.r ZM_BFb Zea ma... 38 2.0 gi|91053180|gb|EB163598.1|EB163598 ZM_BFb0311I22.r ZM_BFb Zea ma... 38 2.0 gi|3420232|gb|AF058763.1|AF058763 Zea mays uroporphyrinogen deca... 38 2.0 gi|21215717|gb|AY111127.1| Zea mays CL1743_1 mRNA sequence 38 2.0 gi|21215717|gb|AY111127.1| Zea mays CL1743_1 mRNA sequence 38 2.0 gi|3420232|gb|AF058763.1|AF058763 Zea mays uroporphyrinogen deca... 38 2.0 gi|92110165|gb|AC185302.1| Zea mays chromosome UNK clone CH201-4... 38 2.0 gi|48762559|gb|AC145224.7| Zea mays clone ZMMBBc0062A01, *** SEQ... 38 2.0 gi|5018420|gb|AI714613.1|AI714613 605068C05.x1 605 - Endosperm c... 36 8.1 gi|5757159|gb|AI964446.1|AI964446 496010F03.x1 496 - stressed sh... 36 8.1 gi|6403374|gb|AW171849.1|AW171849 618051E02.x1 618 - Inbred Tass... 36 8.1 gi|9732749|gb|BE511501.1|BE511501 946061C07.y1 946 - tassel prim... 36 8.1 gi|9794387|gb|BE552695.1|BE552695 946083H10.y1 946 - tassel prim... 36 8.1 gi|9794606|gb|BE552914.1|BE552914 946087C11.y1 946 - tassel prim... 36 8.1 gi|9953450|gb|BE640033.1|BE640033 946044H08.x1 946 - tassel prim... 36 8.1 gi|9961409|gb|BE644392.1|BE644392 946061F06.x2 946 - tassel prim... 36 8.1 gi|14646169|gb|BI180373.1|BI180373 949029D03.x4 949 - Juvenile l... 36 8.1 gi|15082805|gb|BI389489.1|BI389489 949060H08.x1 949 - Juvenile l... 36 8.1 gi|15208896|gb|BI430780.1|BI430780 949060H08.y1 949 - Juvenile l... 36 8.1 gi|18174316|gb|BM349704.1|BM349704 MEST254-E03.T3 ISUM5-RN Zea m... 36 8.1 gi|21891694|gb|BQ744907.1|BQ744907 946112B08.y1 946 - tassel pri... 36 8.1 gi|24766727|gb|CA401874.1|CA401874 EL01N0427G10.g Endosperm_4 Ze... 36 8.1 gi|26557941|gb|CA830176.1|CA830176 1117003D10.y1 1117 - Unigene ... 36 8.1 gi|28873495|gb|CB329477.1|CB329477 3529_1_30_1_E07.y_1 3529 - 2 ... 36 8.1 gi|28983986|gb|BQ538888.2|BQ538888 MEST607-D07.T3 ISUM4-TN Zea m... 36 8.1 gi|28985532|gb|CB350688.1|CB350688 MEST254-E03.univ ISUM5-RN Zea... 36 8.1 gi|31353367|gb|CD437724.1|CD437724 EL01N0504D02.b Endosperm_5 Ze... 36 8.1 gi|31359181|gb|CD443538.1|CD443538 EL01N0427G10.b Endosperm_4 Ze... 36 8.1 gi|32805592|gb|CD957826.1|CD957826 SCM_162 GeneTag2 Zea mays cDN... 36 8.1 gi|32856652|gb|CD996333.1|CD996333 QBC2e07.xg QBC Zea mays cDNA ... 36 8.1 gi|32857511|gb|CD997192.1|CD997192 QBD4e10.xg QBD Zea mays cDNA ... 36 8.1 gi|32907075|gb|CF011888.1|CF011888 QBK13f06.pg QBK Zea mays cDNA... 36 8.1 gi|32912686|gb|CF017498.1|CF017498 QBM24h11.xg QBM Zea mays cDNA... 36 8.1 gi|32945474|gb|CF050293.1|CF050293 QCM10d01.yg QCM Zea mays cDNA... 36 8.1 gi|37382880|gb|CF628410.1|CF628410 zmrws48_0A10-005-e10.s1 zmrws... 36 8.1 gi|37385240|gb|CF629750.1|CF629750 zmrws48_0A20-005-a03.s1 zmrws... 36 8.1 gi|37391821|gb|CF633155.1|CF633155 zmrws48_0B20-012-c07.s4 zmrws... 36 8.1 gi|37392928|gb|CF633717.1|CF633717 zmrww00_0A10-003-c09.s1 zmrww... 36 8.1 gi|60339245|gb|DN206218.1|DN206218 MEST830_E11.T7-1 UGA-ZmSAM-XZ... 36 8.1 gi|60340432|gb|DN207405.1|DN207405 MEST848_B05.T7-1 UGA-ZmSAM-XZ... 36 8.1 gi|60344555|gb|DN211528.1|DN211528 MEST925_F12.T7-1 UGA-ZmSAM-XZ... 36 8.1 gi|60348115|gb|DN215088.1|DN215088 MEST907_G05.T7-1 UGA-ZmSAM-XZ... 36 8.1 gi|60395979|gb|DN228849.1|DN228849 MEST1004_E10.T7-1 UGA-ZmSAM-X... 36 8.1 gi|60399333|gb|DN232147.1|DN232147 MEST1201_A10.T7-1 UGA-ZmSAM-X... 36 8.1 gi|67012046|gb|CO440795.1|CO440795 MZCCS10002H04.g Maize Endospe... 36 8.1 gi|67020240|gb|CO448989.1|CO448989 MZCCL10135A12.g Maize Endospe... 36 8.1 gi|67023659|gb|CO452408.1|CO452408 MZCCL10176B03.g Maize Endospe... 36 8.1 gi|67032131|gb|CO460880.1|CO460880 MZCCS15022E05.g Maize Endospe... 36 8.1 gi|71304394|gb|DR788310.1|DR788310 ZM_BFb0006E08.r ZM_BFb Zea ma... 36 8.1 gi|71433976|gb|DR815026.1|DR815026 ZM_BFb0044P13.f ZM_BFb Zea ma... 36 8.1 gi|71433977|gb|DR815027.1|DR815027 ZM_BFb0044P13.r ZM_BFb Zea ma... 36 8.1 gi|76011004|gb|DT938174.1|DT938174 ZM_BFb0117P19.f ZM_BFb Zea ma... 36 8.1 gi|76011005|gb|DT938175.1|DT938175 ZM_BFb0117P19.r ZM_BFb Zea ma... 36 8.1 gi|76924807|gb|DV170138.1|DV170138 ZM_BFb0169I12.f ZM_BFb Zea ma... 36 8.1 gi|76924808|gb|DV170139.1|DV170139 ZM_BFb0169I12.r ZM_BFb Zea ma... 36 8.1 gi|78025915|gb|DV494302.1|DV494302 1000207-B03.T7-1 UGI-Reseq Ze... 36 8.1 gi|78080885|gb|DV509297.1|DV509297 ZM_BFb0188F04.f ZM_BFb Zea ma... 36 8.1 gi|78080886|gb|DV509298.1|DV509298 ZM_BFb0188F04.r ZM_BFb Zea ma... 36 8.1 gi|78104452|gb|DV522870.1|DV522870 ZM_BFb0208N08.f ZM_BFb Zea ma... 36 8.1 gi|78545105|gb|DV622603.1|DV622603 IV-1091-404B-D01.T7-1 UGIV-10... 36 8.1 gi|84976708|gb|DW475130.1|DW475130 0177 Zea mays central cell cD... 36 8.1 gi|84977219|gb|DW475641.1|DW475641 0714 Zea mays central cell cD... 36 8.1 gi|84977381|gb|DW475803.1|DW475803 0886 Zea mays central cell cD... 36 8.1 gi|87157156|gb|DY401945.1|DY401945 V-946-2D-B04.T7-1 UGV-Reseq Z... 36 8.1 gi|91877359|gb|EB407316.1|EB407316 ZM_BFb0319H02.r ZM_BFb Zea ma... 36 8.1 gi|54652357|gb|BT017576.1| Zea mays clone EL01N0427G10.c mRNA se... 36 8.1 gi|54653419|gb|BT018638.1| Zea mays clone EL01N0504D02.d mRNA se... 36 8.1 gi|21207318|gb|AY104240.1| Zea mays PCO085368 mRNA sequence 36 8.1 gi|21208162|gb|AY105084.1| Zea mays PCO124492 mRNA sequence 36 8.1 gi|45589365|gb|BV119992.1| PZA01384 CML69 Zea mays CML69 Zea may... 36 8.1 gi|45589364|gb|BV119991.1| PZA01384 CML322 Zea mays CML322 Zea m... 36 8.1 gi|45589363|gb|BV119990.1| PZA01384 CML333 Zea mays CML333 Zea m... 36 8.1 gi|45589361|gb|BV119988.1| PZA01384 Kul3 Zea mays Kul3 Zea mays ... 36 8.1 gi|45589360|gb|BV119987.1| PZA01384 NC350 Zea mays NC350 Zea may... 36 8.1 gi|45589359|gb|BV119986.1| PZA01384 CML247 Zea mays CML247 Zea m... 36 8.1 gi|45589358|gb|BV119985.1| PZA01384 Hp301 Zea mays Hp301 Zea may... 36 8.1 gi|45589357|gb|BV119984.1| PZA01384 M37W Zea mays M37W Zea mays ... 36 8.1 gi|45589356|gb|BV119983.1| PZA01384 Ky21 Zea mays Ky21 Zea mays ... 36 8.1 gi|45589355|gb|BV119982.1| PZA01384 Mo17(2) Zea mays Mo17(2) Zea... 36 8.1 gi|45589354|gb|BV119981.1| PZA01384 Mo17(1) Zea mays Mo17(1) Zea... 36 8.1 gi|45589353|gb|BV119980.1| PZA01384 Il14H Zea mays Il14H Zea may... 36 8.1 gi|45589352|gb|BV119979.1| PZA01384 Oh43 Zea mays Oh43 Zea mays ... 36 8.1 gi|45589351|gb|BV119978.1| PZA01384 B73(2) Zea mays B73(2) Zea m... 36 8.1 gi|45589350|gb|BV119977.1| PZA01384 B73(1) Zea mays B73(1) Zea m... 36 8.1 gi|54653419|gb|BT018638.1| Zea mays clone EL01N0504D02.d mRNA se... 36 8.1 gi|54652357|gb|BT017576.1| Zea mays clone EL01N0427G10.c mRNA se... 36 8.1 gi|38607381|gb|AY359582.1| Zea mays B73 Etr2-like ethylene recep... 36 8.1 gi|38607377|gb|AY359580.1| Zea mays B73 ethylene receptor (ETR9)... 36 8.1 gi|21208162|gb|AY105084.1| Zea mays PCO124492 mRNA sequence 36 8.1 gi|21207318|gb|AY104240.1| Zea mays PCO085368 mRNA sequence 36 8.1 gi|90265901|gb|AC183908.1| Zea mays chromosome UNK clone ZMMBBb-... 36 8.1 gi|58082436|gb|AC155577.2| Zea mays strain B73 clone ZMMBBc0186N... 36 8.1 >gi|58082306|gb|AC155445.2| Zea mays strain B73 clone ZMMBBb0297M01, *** SEQUENCING IN PROGRESS ***, 6 unordered pieces Length = 126192 Score = 1283 bits (647), Expect = 0.0 Identities = 709/730 (97%), Gaps = 6/730 (0%) Strand = Plus / Minus Query: 1 ggcgttgctggtaagagcccctccctgtcccgtggatttaaagttgtgtgtggacacagt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 50047 ggcgttgctggtaagagcccctccctgtcccgtggatttaaagttgtgtgtggacacagt 49988 Query: 61 ggtccgttgctgtccatcggaaacagcatgcttgggattcttgacatctcgttgcttgat 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 49987 ggtccgttgctgtccatcggaaacagcatgcttgggattcttgacatctcgttgcttgat 49928 Query: 121 ggtcttgtgagcatattggctagtgctagttctcagcagtgcataggagggacggcgaac 180 ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 49927 ggtcttgtgagcatattggctagtgctagttctcagcagtgcataggaggggaggcgaac 49868 Query: 181 tctagcgttaaccttgaggggaccgtcttcacattctcagacacaaggaacaagttcaca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 49867 tctagcgttaaccttgaggggaccgtcttcacattctcagacacaaggaacaagttcaca 49808 Query: 241 gctctgggttgtaacgtggtggccatgcttttgaatggcagcacggggtatagcggtggc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 49807 gctctgggttgtaacgtggtggccatgcttttgaatggcagcacggggtatagcggtggc 49748 Query: 301 tgtgcttccttttgctctagtggaaataacatcatcgacggctcatgctctggggtggct 360 |||||||||||||||||||| ||||||| |||||||||||||||||||||||| |||||| Sbjct: 49747 tgtgcttccttttgctctagcggaaatagcatcatcgacggctcatgctctggtgtggct 49688 Query: 361 tgctgccaagcgccggttcccaaagggctaaagaagctggacttagagttcagtaatatt 420 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 49687 tgctgccaagcgcctgttcccaaagggctaaagaagctggacttagagttcagtaatatt 49628 Query: 421 aatataaccaacagcggcatcgattacgattactggccatgtggtcaggccttcgtcgtg 480 |||||||||||||||||||||||||||| |||||||||||||||||||| ||||| Sbjct: 49627 aatataaccaacagcggcatcgattacg------ggccatgtggtcaggccttcatcgtg 49574 Query: 481 gagcaggattcatatgtgttttcagctcttgatctgaacaacacaaacgacacaaaacct 540 |||||| ||||||||||||||||| || |||||||||| ||||| |||||||||||| Sbjct: 49573 gagcagaattcatatgtgttttcacttcctgatctgaactacacagttgacacaaaacct 49514 Query: 541 caataccgacatgttgtgctcgagtggtctgtgaacggcagcagctgtgaagaggcgaaa 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 49513 caataccgacatgttgtgctcgagtggtctgtgaacggcagcagctgtgaagaggcgaaa 49454 Query: 601 ctgtccggatcatacgcctgcgcagagaatgcctactgctacaactcatcaaacggaatc 660 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 49453 ctgtccggatcatacgcctgcgcagagaatgcctactgctacaactcatcaaacggaatc 49394 Query: 661 ggttaccgctgcaattgctccagtggattcgaggggaacccatacctgcaagggccaaat 720 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 49393 ggttaccgctgcaattgctccagtggattcgaggggaacccatacctgcaagggccaaat 49334 Query: 721 ggatgcacag 730 |||||||||| Sbjct: 49333 ggatgcacag 49324 Score = 307 bits (155), Expect = 1e-81 Identities = 155/155 (100%) Strand = Plus / Minus Query: 729 agatattaatgaatgcatcaccagaaatccgtgcaccaataggtgctcaaacacaatagg 788 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 49209 agatattaatgaatgcatcaccagaaatccgtgcaccaataggtgctcaaacacaatagg 49150 Query: 789 tggtttccagtgcacgtgcccagcagggatgagcggcgacggcctcaaggaaggaagtgg 848 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 49149 tggtttccagtgcacgtgcccagcagggatgagcggcgacggcctcaaggaaggaagtgg 49090 Query: 849 ttgcaatggagtaagcacactagtgattgcaatag 883 ||||||||||||||||||||||||||||||||||| Sbjct: 49089 ttgcaatggagtaagcacactagtgattgcaatag 49055 Score = 188 bits (95), Expect = 9e-46 Identities = 98/99 (98%) Strand = Plus / Minus Query: 882 agttgcaggattagctctgctagtgcttctcctcatccttggcttctggactcactggct 941 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 48901 agttgcaggattagctctgctagtgcttctcctcatccttggcttctggactcactggct 48842 Query: 942 tggtaagaagaggaaacttgcaaagacaaggcaaaggta 980 || |||||||||||||||||||||||||||||||||||| Sbjct: 48841 tgttaagaagaggaaacttgcaaagacaaggcaaaggta 48803 >gi|9731814|gb|BE510566.1|BE510566 946053G10.y1 946 - tassel primordium prepared by Schmidt lab Zea mays cDNA, mRNA sequence Length = 589 Score = 1017 bits (513), Expect = 0.0 Identities = 576/596 (96%), Gaps = 7/596 (1%) Strand = Plus / Plus Query: 242 ctctgggttgtaacgtggtggccatgcttttgaatggcagcacggggtatagcggtggct 301 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 1 ctctgggttgtaacgtggtggccatgcttttgaatggcagcacggggtatagcgg-ggct 59 Query: 302 gtgcttccttttgctctagtggaaataacatcatcgacggctcatgctctggggtggctt 361 ||||||||||||||||||| ||||||| |||||||||||||||||||||||| ||||||| Sbjct: 60 gtgcttccttttgctctagcggaaatagcatcatcgacggctcatgctctggtgtggctt 119 Query: 362 gctgccaagcgccggttcccaaagggctaaagaagctggacttagagttcagtaatatta 421 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 120 gctgccaagcgcctgttcccaaagggctaaagaagctggacttagagttcagtaatatta 179 Query: 422 atataaccaacagcggcatcgattacgattactggccatgtggtcaggccttcgtcgtgg 481 ||||||||||||||||||||||||||| |||||||||||||||||||| |||||| Sbjct: 180 atataaccaacagcggcatcgattacg------ggccatgtggtcaggccttcatcgtgg 233 Query: 482 agcaggattcatatgtgttttcagctcttgatctgaacaacacaaacgacacaaaacctc 541 ||||| ||||||||||||||||| || |||||||||| ||||| ||||||||||||| Sbjct: 234 agcagaattcatatgtgttttcacttcctgatctgaactacacagttgacacaaaacctc 293 Query: 542 aataccgacatgttgtgctcgagtggtctgtgaacggcagcagctgtgaagaggcgaaac 601 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 294 aataccgacatgttgtgctcgagtggtctgtgaacggcagcagctgtgaagaggcgaaac 353 Query: 602 tgtccggatcatacgcctgcgcagagaatgcctactgctacaactcatcaaacggaatcg 661 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 354 tgtccggatcatacgcctgcgcagagaatgcctactgctacaactcatcaaacggaatcg 413 Query: 662 gttaccgctgcaattgctccagtggattcgaggggaacccatacctgcaagggccaaatg 721 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 414 gttaccgctgcaattgctccagtggattcgaggggaacccatacctgcaagggccaaatg 473 Query: 722 gatgcacagatattaatgaatgcatcaccagaaatccgtgcaccaataggtgctcaaaca 781 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 474 gatgcacagatattaatgaatgcatcaccagaaatccgtgcaccaataggtgctcaaaca 533 Query: 782 caataggtggtttccagtgcacgtgcccagcagggatgagcggcgacggcctcaag 837 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 534 caataggtggtttccagtgcacgtgcccagcagggatgagcggcgacggcctcaag 589 >gi|60343215|gb|DN210188.1|DN210188 MEST897_H11.T7-1 UGA-ZmSAM-XZ2 Zea mays cDNA, mRNA sequence Length = 723 Score = 932 bits (470), Expect = 0.0 Identities = 542/565 (95%), Gaps = 7/565 (1%) Strand = Plus / Plus Query: 1 ggcgttgctggtaagagcccctccctgtcccgtggatttaaagttgtgtgtggacacagt 60 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 ggcgttgctggta-gagcccctccctgtcccgtggatttaaagttgtgtgtggacacagt 59 Query: 61 ggtccgttgctgtccatcggaaacagcatgcttgggattcttgacatctcgttgcttgat 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 60 ggtccgttgctgtccatcggaaacagcatgcttgggattcttgacatctcgttgcttgat 119 Query: 121 ggtcttgtgagcatattggctagtgctagttctcagcagtgcataggagggacggcgaac 180 ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 120 ggtcttgtgagcatattggctagtgctagttctcagcagtgcataggaggggaggcgaac 179 Query: 181 tctagcgttaaccttgaggggaccgtcttcacattctcagacacaaggaacaagttcaca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 180 tctagcgttaaccttgaggggaccgtcttcacattctcagacacaaggaacaagttcaca 239 Query: 241 gctctgggttgtaacgtggtggccatgcttttgaatggcagcacggggtatagcggtggc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 240 gctctgggttgtaacgtggtggccatgcttttgaatggcagcacggggtatagcggtggc 299 Query: 301 tgtgcttccttttgctctagtggaaataacatcatcgacggctcatgctctggggtggct 360 |||||||||||||||||||| ||||||| |||||||||||||||||||||||| |||||| Sbjct: 300 tgtgcttccttttgctctagcggaaatagcatcatcgacggctcatgctctggtgtggct 359 Query: 361 tgctgccaagcgccggttcccaaagggctaaagaagctggacttagagttcagtaatatt 420 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 360 tgctgccaagcgcctgttcccaaagggctaaagaagctggacttagagttcagtaatatt 419 Query: 421 aatataaccaacagcggcatcgattacgattactggccatgtggtcaggccttcgtcgtg 480 |||||||||||||||||||||||||||| |||||||||||||||||||| ||||| Sbjct: 420 aatataaccaacagcggcatcgattacg------ggccatgtggtcaggccttcatcgtg 473 Query: 481 gagcaggattcatatgtgttttcagctcttgatctgaacaacacaaacgacacaaaacct 540 |||||| ||||||||||||||||| || |||||||||| ||||| |||||||||||| Sbjct: 474 gagcagaattcatatgtgttttcacttcctgatctgaactacacagttgacacaaaacct 533 Query: 541 caataccgacatgttgtgctcgagt 565 ||||||||||||||||||| ||||| Sbjct: 534 caataccgacatgttgtgcgcgagt 558 >gi|13178481|gb|BG349739.1|BG349739 947030D09.y2 947 - 2 week shoot from Barkan lab Zea mays cDNA, mRNA sequence Length = 453 Score = 884 bits (446), Expect = 0.0 Identities = 449/450 (99%) Strand = Plus / Plus Query: 531 cacaaaacctcaataccgacatgttgtgctcgagtggtctgtgaacggcagcagctgtga 590 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4 cacaaaacctcaataccgacatgttgtgctcgagtggtctgtgaacggcagcagctgtga 63 Query: 591 agaggcgaaactgtccggatcatacgcctgcgcagagaatgcctactgctacaactcatc 650 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 64 agaggcgaaactgtccggatcatacgcctgcgcagagaatgcctactgctacaactcatc 123 Query: 651 aaacggaatcggttaccgctgcaattgctccagtggattcgaggggaacccatacctgca 710 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 124 aaacggaatcggttaccgctgcaattgctccagtggattcgaggggaacccatacctgca 183 Query: 711 agggccaaatggatgcacagatattaatgaatgcatcaccagaaatccgtgcaccaatag 770 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184 agggccaaatggatgcacagatattaatgaatgcatcaccagaaatccgtgcaccaatag 243 Query: 771 gtgctcaaacacaataggtggtttccagtgcacgtgcccagcagggatgagcggcgacgg 830 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 244 gtgctcaaacacaataggtggtttccagtgcacgtgcccagcagggatgagcggcgacgg 303 Query: 831 cctcaaggaaggaagtggttgcaatggagtaagcacactagtgattgcaatagttgcagg 890 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 304 cctcaaggaaggaagtggttgcaatggagtaagcacactagtgattgcaatagttgcagg 363 Query: 891 attagctctgctagtgcttctcctcatccttggcttctggactcactggcttggtaagaa 950 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 364 attagctctgctagtgcttctcctcatccttggcttctggactcactggcttgttaagaa 423 Query: 951 gaggaaacttgcaaagacaaggcaaaggta 980 |||||||||||||||||||||||||||||| Sbjct: 424 gaggaaacttgcaaagacaaggcaaaggta 453 >gi|13178161|gb|BG349419.1|BG349419 947030D09.y1 947 - 2 week shoot from Barkan lab Zea mays cDNA, mRNA sequence Length = 424 Score = 835 bits (421), Expect = 0.0 Identities = 421/421 (100%) Strand = Plus / Plus Query: 531 cacaaaacctcaataccgacatgttgtgctcgagtggtctgtgaacggcagcagctgtga 590 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4 cacaaaacctcaataccgacatgttgtgctcgagtggtctgtgaacggcagcagctgtga 63 Query: 591 agaggcgaaactgtccggatcatacgcctgcgcagagaatgcctactgctacaactcatc 650 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 64 agaggcgaaactgtccggatcatacgcctgcgcagagaatgcctactgctacaactcatc 123 Query: 651 aaacggaatcggttaccgctgcaattgctccagtggattcgaggggaacccatacctgca 710 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 124 aaacggaatcggttaccgctgcaattgctccagtggattcgaggggaacccatacctgca 183 Query: 711 agggccaaatggatgcacagatattaatgaatgcatcaccagaaatccgtgcaccaatag 770 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184 agggccaaatggatgcacagatattaatgaatgcatcaccagaaatccgtgcaccaatag 243 Query: 771 gtgctcaaacacaataggtggtttccagtgcacgtgcccagcagggatgagcggcgacgg 830 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 244 gtgctcaaacacaataggtggtttccagtgcacgtgcccagcagggatgagcggcgacgg 303 Query: 831 cctcaaggaaggaagtggttgcaatggagtaagcacactagtgattgcaatagttgcagg 890 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 304 cctcaaggaaggaagtggttgcaatggagtaagcacactagtgattgcaatagttgcagg 363 Query: 891 attagctctgctagtgcttctcctcatccttggcttctggactcactggcttggtaagaa 950 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 364 attagctctgctagtgcttctcctcatccttggcttctggactcactggcttggtaagaa 423 Query: 951 g 951 | Sbjct: 424 g 424 >gi|47081720|gb|BV145617.1| PZA02539-77695-Mo17 Zea mays Mo17 Zea mays STS genomic, sequence tagged site Length = 444 Score = 460 bits (232), Expect = e-127 Identities = 247/252 (98%) Strand = Plus / Plus Query: 479 tggagcaggattcatatgtgttttcagctcttgatctgaacaacacaaacgacacaaaac 538 |||||||| ||||||||||||||||||||||||||||||||||||||||| |||||| || Sbjct: 10 tggagcagaattcatatgtgttttcagctcttgatctgaacaacacaaactacacaagac 69 Query: 539 ctcaataccgacatgttgtgctcgagtggtctgtgaacggcagcagctgtgaagaggcga 598 |||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||| Sbjct: 70 ctcaataccgacatgttgtgctcgagtggtctataaacggcagcagctgtgaagaggcga 129 Query: 599 aactgtccggatcatacgcctgcgcagagaatgcctactgctacaactcatcaaacggaa 658 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130 aactgtccggatcatacgcctgcgcagagaatgcctactgctacaactcatcaaacggaa 189 Query: 659 tcggttaccgctgcaattgctccagtggattcgaggggaacccatacctgcaagggccaa 718 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 190 tcggttaccgctgcaattgctccagtggattcgaggggaacccatacctgcaagggccaa 249 Query: 719 atggatgcacag 730 |||||||||||| Sbjct: 250 atggatgcacag 261 Score = 131 bits (66), Expect = 2e-28 Identities = 66/66 (100%) Strand = Plus / Plus Query: 729 agatattaatgaatgcatcaccagaaatccgtgcaccaataggtgctcaaacacaatagg 788 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 376 agatattaatgaatgcatcaccagaaatccgtgcaccaataggtgctcaaacacaatagg 435 Query: 789 tggttt 794 |||||| Sbjct: 436 tggttt 441 >gi|47081723|gb|BV145620.1| PZA02539-77696-T218 Zea mays T218 Zea mays STS genomic, sequence tagged site Length = 433 Score = 450 bits (227), Expect = e-124 Identities = 245/251 (97%) Strand = Plus / Plus Query: 480 ggagcaggattcatatgtgttttcagctcttgatctgaacaacacaaacgacacaaaacc 539 ||||||| ||| ||||||||||||||||||||||||||||||||||||| |||||| ||| Sbjct: 1 ggagcagaattgatatgtgttttcagctcttgatctgaacaacacaaactacacaagacc 60 Query: 540 tcaataccgacatgttgtgctcgagtggtctgtgaacggcagcagctgtgaagaggcgaa 599 ||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||| Sbjct: 61 tcaataccgacatgttgtgctcgagtggtctataaacggcagcagctgtgaagaggcgaa 120 Query: 600 actgtccggatcatacgcctgcgcagagaatgcctactgctacaactcatcaaacggaat 659 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 actgtccggatcatacgcctgcgcagagaatgcctactgctacaactcatcaaacggaat 180 Query: 660 cggttaccgctgcaattgctccagtggattcgaggggaacccatacctgcaagggccaaa 719 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 cggttaccgctgcaattgctccagtggattcgaggggaacccatacctgcaagggccaaa 240 Query: 720 tggatgcacag 730 ||||||||||| Sbjct: 241 tggatgcacag 251 Score = 119 bits (60), Expect = 7e-25 Identities = 66/68 (97%) Strand = Plus / Plus Query: 729 agatattaatgaatgcatcaccagaaatccgtgcaccaataggtgctcaaacacaatagg 788 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 365 agatattaatgaatgcatcagcagaaatccgtgcaccaataggtgctcaaacacaatagg 424 Query: 789 tggtttcc 796 | |||||| Sbjct: 425 ttgtttcc 432 >gi|47081725|gb|BV145622.1| PZA02539-77687-Tx501 Zea mays Tx501 Zea mays STS genomic, sequence tagged site Length = 429 Score = 444 bits (224), Expect = e-122 Identities = 239/244 (97%) Strand = Plus / Plus Query: 487 gattcatatgtgttttcagctcttgatctgaacaacacaaacgacacaaaacctcaatac 546 |||| ||||||||||||||||||||||||||||||||||||| |||||| |||||||||| Sbjct: 4 gattgatatgtgttttcagctcttgatctgaacaacacaaactacacaagacctcaatac 63 Query: 547 cgacatgttgtgctcgagtggtctgtgaacggcagcagctgtgaagaggcgaaactgtcc 606 |||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||| Sbjct: 64 cgacatgttgtgctcgagtggtctataaacggcagcagctgtgaagaggcgaaactgtcc 123 Query: 607 ggatcatacgcctgcgcagagaatgcctactgctacaactcatcaaacggaatcggttac 666 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 124 ggatcatacgcctgcgcagagaatgcctactgctacaactcatcaaacggaatcggttac 183 Query: 667 cgctgcaattgctccagtggattcgaggggaacccatacctgcaagggccaaatggatgc 726 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184 cgctgcaattgctccagtggattcgaggggaacccatacctgcaagggccaaatggatgc 243 Query: 727 acag 730 |||| Sbjct: 244 acag 247 Score = 121 bits (61), Expect = 2e-25 Identities = 61/61 (100%) Strand = Plus / Plus Query: 729 agatattaatgaatgcatcaccagaaatccgtgcaccaataggtgctcaaacacaatagg 788 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 agatattaatgaatgcatcaccagaaatccgtgcaccaataggtgctcaaacacaatagg 420 Query: 789 t 789 | Sbjct: 421 t 421 >gi|47081726|gb|BV145623.1| PZA02539-77699-W22_R-scm2 Zea mays W22_R-scm2 Zea mays STS genomic, sequence tagged site Length = 402 Score = 434 bits (219), Expect = e-120 Identities = 231/235 (98%) Strand = Plus / Plus Query: 496 gtgttttcagctcttgatctgaacaacacaaacgacacaaaacctcaataccgacatgtt 555 ||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||| Sbjct: 1 gtgttttcagctcttgatctgaacaacacaaactacacaagacctcaataccgacatgtt 60 Query: 556 gtgctcgagtggtctgtgaacggcagcagctgtgaagaggcgaaactgtccggatcatac 615 ||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 gtgctcgagtggtctataaacggcagcagctgtgaagaggcgaaactgtccggatcatac 120 Query: 616 gcctgcgcagagaatgcctactgctacaactcatcaaacggaatcggttaccgctgcaat 675 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 gcctgcgcagagaatgcctactgctacaactcatcaaacggaatcggttaccgctgcaat 180 Query: 676 tgctccagtggattcgaggggaacccatacctgcaagggccaaatggatgcacag 730 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 tgctccagtggattcgaggggaacccatacctgcaagggccaaatggatgcacag 235 Score = 99.6 bits (50), Expect = 6e-19 Identities = 50/50 (100%) Strand = Plus / Plus Query: 729 agatattaatgaatgcatcaccagaaatccgtgcaccaataggtgctcaa 778 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 349 agatattaatgaatgcatcaccagaaatccgtgcaccaataggtgctcaa 398 >gi|47081717|gb|BV145614.1| PZA02539-77688-B73 Zea mays B73 Zea mays STS genomic, sequence tagged site Length = 444 Score = 434 bits (219), Expect = e-120 Identities = 246/255 (96%) Strand = Plus / Plus Query: 476 tcgtggagcaggattcatatgtgttttcagctcttgatctgaacaacacaaacgacacaa 535 ||||||||||| ||||||||||||||||| || |||||||||| ||||| ||||||| Sbjct: 7 tcgtggagcagaattcatatgtgttttcacttcctgatctgaactacacagttgacacaa 66 Query: 536 aacctcaataccgacatgttgtgctcgagtggtctgtgaacggcagcagctgtgaagagg 595 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 67 aacctcaataccgacatgttgtgctagagtggtctgtgaacggcagcagctgtgaagagg 126 Query: 596 cgaaactgtccggatcatacgcctgcgcagagaatgcctactgctacaactcatcaaacg 655 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127 cgaaactgtccggatcatacgcctgcgcagagaatgcctactgctacaactcatcaaacg 186 Query: 656 gaatcggttaccgctgcaattgctccagtggattcgaggggaacccatacctgcaagggc 715 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 187 gaatcggttaccgctgcaattgctccagtggattcgaggggaacccatacctgcaagggc 246 Query: 716 caaatggatgcacag 730 ||||||||||||||| Sbjct: 247 caaatggatgcacag 261 Score = 119 bits (60), Expect = 7e-25 Identities = 66/68 (97%) Strand = Plus / Plus Query: 729 agatattaatgaatgcatcaccagaaatccgtgcaccaataggtgctcaaacacaatagg 788 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 376 agatattaatgaatgcatcaccaaaaatccgtgcaccaataggtgctcaaacacaatagg 435 Query: 789 tggtttcc 796 || ||||| Sbjct: 436 tgttttcc 443 >gi|47081721|gb|BV145618.1| PZA02539-77700-Mo17 Zea mays Mo17 Zea mays STS genomic, sequence tagged site Length = 416 Score = 430 bits (217), Expect = e-118 Identities = 245/253 (96%), Gaps = 1/253 (0%) Strand = Plus / Plus Query: 478 gtggagcaggattcatatgtgttttcagctcttgatctgaacaacacaaacgacacaaaa 537 ||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||| | Sbjct: 9 gtggagcagaattcatatgtgttttcagctcttgatctgaacaacacaaactacacaaga 68 Query: 538 cctcaataccgacatgttgtgctcgagtggtctgtgaacggcagcagctgtgaagaggcg 597 |||| |||||||||||||||||| ||||| ||| | |||||||||||||||||||||||| Sbjct: 69 cctccataccgacatgttgtgctagagtg-tctataaacggcagcagctgtgaagaggcg 127 Query: 598 aaactgtccggatcatacgcctgcgcagagaatgcctactgctacaactcatcaaacgga 657 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 128 aaactgtccggatcatacgcctgcgcagagaatgcctactgctacaactcatcaaacgga 187 Query: 658 atcggttaccgctgcaattgctccagtggattcgaggggaacccatacctgcaagggcca 717 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 188 atcggttaccgctgcaattgctccagtggattcgaggggaacccatacctgcaagggcca 247 Query: 718 aatggatgcacag 730 ||||||||||||| Sbjct: 248 aatggatgcacag 260 Score = 46.1 bits (23), Expect = 0.008 Identities = 30/31 (96%), Gaps = 1/31 (3%) Strand = Plus / Plus Query: 729 agatattaatgaatgcatca-ccagaaatcc 758 |||||||||||||||||||| |||||||||| Sbjct: 375 agatattaatgaatgcatcacccagaaatcc 405 >gi|47081718|gb|BV145615.1| PZA02539-77685-CO159 Zea mays CO159 Zea mays STS genomic, sequence tagged site Length = 421 Score = 422 bits (213), Expect = e-116 Identities = 240/249 (96%) Strand = Plus / Plus Query: 482 agcaggattcatatgtgttttcagctcttgatctgaacaacacaaacgacacaaaacctc 541 ||||| ||| ||||||||||||| || |||||||||| ||||| ||||||||||||| Sbjct: 1 agcagaattgatatgtgttttcacttcctgatctgaactacacagttgacacaaaacctc 60 Query: 542 aataccgacatgttgtgctcgagtggtctgtgaacggcagcagctgtgaagaggcgaaac 601 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 aataccgacatgttgtgctcgagtggtctgtgaacggcagcagctgtgaagaggcgaaac 120 Query: 602 tgtccggatcatacgcctgcgcagagaatgcctactgctacaactcatcaaacggaatcg 661 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 tgtccggatcatacgcctgcgcagagaatgcctactgctacaactcatcaaacggaatcg 180 Query: 662 gttaccgctgcaattgctccagtggattcgaggggaacccatacctgcaagggccaaatg 721 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 gttaccgctgcaattgctccagtggattcgaggggaacccatacctgcaagggccaaatg 240 Query: 722 gatgcacag 730 ||||||||| Sbjct: 241 gatgcacag 249 Score = 115 bits (58), Expect = 1e-23 Identities = 58/58 (100%) Strand = Plus / Plus Query: 729 agatattaatgaatgcatcaccagaaatccgtgcaccaataggtgctcaaacacaata 786 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 364 agatattaatgaatgcatcaccagaaatccgtgcaccaataggtgctcaaacacaata 421 >gi|47081724|gb|BV145621.1| PZA02539-77697-Tx303 Zea mays Tx303 Zea mays STS genomic, sequence tagged site Length = 432 Score = 414 bits (209), Expect = e-114 Identities = 239/249 (95%) Strand = Plus / Plus Query: 482 agcaggattcatatgtgttttcagctcttgatctgaacaacacaaacgacacaaaacctc 541 ||||| ||| ||||||||||||| || |||||||||| ||||| ||||||||||||| Sbjct: 1 agcagaattgatatgtgttttcacttcctgatctgaactacacagttgacacaaaacctc 60 Query: 542 aataccgacatgttgtgctcgagtggtctgtgaacggcagcagctgtgaagaggcgaaac 601 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 61 aataccgacatgttgtgctagagtggtctgtgaacggcagcagctgtgaagaggcgaaac 120 Query: 602 tgtccggatcatacgcctgcgcagagaatgcctactgctacaactcatcaaacggaatcg 661 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 tgtccggatcatacgcctgcgcagagaatgcctactgctacaactcatcaaacggaatcg 180 Query: 662 gttaccgctgcaattgctccagtggattcgaggggaacccatacctgcaagggccaaatg 721 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 gttaccgctgcaattgctccagtggattcgaggggaacccatacctgcaagggccaaatg 240 Query: 722 gatgcacag 730 ||||||||| Sbjct: 241 gatgcacag 249 Score = 117 bits (59), Expect = 3e-24 Identities = 65/67 (97%) Strand = Plus / Plus Query: 730 gatattaatgaatgcatcaccagaaatccgtgcaccaataggtgctcaaacacaataggt 789 ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 365 gatattaatgaatgcatcaccagaaatccgtgcaccaataggtgctcaagcacaataggg 424 Query: 790 ggtttcc 796 ||||||| Sbjct: 425 ggtttcc 431 >gi|47081716|gb|BV145613.1| PZA02539-77683-B73 Zea mays B73 Zea mays STS genomic, sequence tagged site Length = 432 Score = 414 bits (209), Expect = e-114 Identities = 239/249 (95%) Strand = Plus / Plus Query: 482 agcaggattcatatgtgttttcagctcttgatctgaacaacacaaacgacacaaaacctc 541 ||||| ||| ||||||||||||| || |||||||||| ||||| ||||||||||||| Sbjct: 1 agcagaattgatatgtgttttcacttcctgatctgaactacacagttgacacaaaacctc 60 Query: 542 aataccgacatgttgtgctcgagtggtctgtgaacggcagcagctgtgaagaggcgaaac 601 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 61 aataccgacatgttgtgctcgagtggtctgtgaacggcaccagctgtgaagaggcgaaac 120 Query: 602 tgtccggatcatacgcctgcgcagagaatgcctactgctacaactcatcaaacggaatcg 661 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 tgtccggatcatacgcctgcgcagagaatgcctactgctacaactcatcaaacggaatcg 180 Query: 662 gttaccgctgcaattgctccagtggattcgaggggaacccatacctgcaagggccaaatg 721 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 gttaccgctgcaattgctccagtggattcgaggggaacccatacctgcaagggccaaatg 240 Query: 722 gatgcacag 730 ||||||||| Sbjct: 241 gatgcacag 249 Score = 117 bits (59), Expect = 3e-24 Identities = 62/63 (98%) Strand = Plus / Plus Query: 730 gatattaatgaatgcatcaccagaaatccgtgcaccaataggtgctcaaacacaataggt 789 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 365 gatattaatgaatgcatcaccaaaaatccgtgcaccaataggtgctcaaacacaataggt 424 Query: 790 ggt 792 ||| Sbjct: 425 ggt 427 >gi|47081722|gb|BV145619.1| PZA02539-77686-Mp708 Zea mays Mp708 Zea mays STS genomic, sequence tagged site Length = 422 Score = 404 bits (204), Expect = e-111 Identities = 239/251 (95%), Gaps = 6/251 (2%) Strand = Plus / Plus Query: 480 ggagcaggattcatatgtgttttcagctcttgatctgaacaacacaaacgacacaaaacc 539 ||||||| |||||||||||||||||||||||||| | ||||||| ||||| ||| Sbjct: 11 ggagcagaattcatatgtgttttcagctcttgattt------cacaaacaacacaggacc 64 Query: 540 tcaataccgacatgttgtgctcgagtggtctgtgaacggcagcagctgtgaagaggcgaa 599 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 65 tcaataccgacatgttgtgctcgagtggtctatgaacggcagcagctgtgaagaggcgaa 124 Query: 600 actgtccggatcatacgcctgcgcagagaatgcctactgctacaactcatcaaacggaat 659 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 125 actgtccggatcatacgcctgcgcagagaatgcctactgctacaactcatcaaacggaat 184 Query: 660 cggttaccgctgcaattgctccagtggattcgaggggaacccatacctgcaagggccaaa 719 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 185 cggttaccgctgcaattgctccagtggattcgaggggaacccatacctgcaagggccaaa 244 Query: 720 tggatgcacag 730 ||||||||||| Sbjct: 245 tggatgcacag 255 Score = 105 bits (53), Expect = 1e-20 Identities = 53/53 (100%) Strand = Plus / Plus Query: 729 agatattaatgaatgcatcaccagaaatccgtgcaccaataggtgctcaaaca 781 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 370 agatattaatgaatgcatcaccagaaatccgtgcaccaataggtgctcaaaca 422 >gi|47081719|gb|BV145616.1| PZA02539-77684-GT119 Zea mays GT119 Zea mays STS genomic, sequence tagged site Length = 396 Score = 383 bits (193), Expect = e-104 Identities = 205/209 (98%) Strand = Plus / Plus Query: 522 cacaaacgacacaaaacctcaataccgacatgttgtgctcgagtggtctgtgaacggcag 581 ||||||| ||||| |||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 19 cacaaacaacacaggacctcaataccgacatgttgtgctcgagtggtctatgaacggcag 78 Query: 582 cagctgtgaagaggcgaaactgtccggatcatacgcctgcgcagagaatgcctactgcta 641 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 79 cagctgtgaagaggcgaaactgtccggatcatacgcctgcgcagagaatgcctactgcta 138 Query: 642 caactcatcaaacggaatcggttaccgctgcaattgctccagtggattcgaggggaaccc 701 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139 caactcatcaaacggaatcggttaccgctgcaattgctccagtggattcgaggggaaccc 198 Query: 702 atacctgcaagggccaaatggatgcacag 730 ||||||||||||||||||||||||||||| Sbjct: 199 atacctgcaagggccaaatggatgcacag 227 Score = 109 bits (55), Expect = 7e-22 Identities = 55/55 (100%) Strand = Plus / Plus Query: 729 agatattaatgaatgcatcaccagaaatccgtgcaccaataggtgctcaaacaca 783 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 342 agatattaatgaatgcatcaccagaaatccgtgcaccaataggtgctcaaacaca 396 >gi|13198603|gb|BG354405.1|BG354405 947036G03.y1 947 - 2 week shoot from Barkan lab Zea mays cDNA, mRNA sequence Length = 525 Score = 38.2 bits (19), Expect = 2.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 573 gaacggcagcagctgtgaa 591 ||||||||||||||||||| Sbjct: 139 gaacggcagcagctgtgaa 157 >gi|50324350|gb|CO519476.1|CO519476 3530_1_128_1_A10.y_1 3530 - Full length cDNA library created by Invitrogen from multiple tissues Zea mays cDNA, mRNA sequence Length = 769 Score = 38.2 bits (19), Expect = 2.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 410 tcagtaatattaatataac 428 ||||||||||||||||||| Sbjct: 249 tcagtaatattaatataac 267 >gi|50328025|gb|CO523151.1|CO523151 3530_1_153_1_B02.y_1 3530 - Full length cDNA library created by Invitrogen from multiple tissues Zea mays cDNA, mRNA sequence Length = 677 Score = 38.2 bits (19), Expect = 2.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 410 tcagtaatattaatataac 428 ||||||||||||||||||| Sbjct: 277 tcagtaatattaatataac 295 >gi|76287101|gb|DV026669.1|DV026669 ZM_BFb0147M18.r ZM_BFb Zea mays cDNA 5', mRNA sequence Length = 738 Score = 38.2 bits (19), Expect = 2.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 573 gaacggcagcagctgtgaa 591 ||||||||||||||||||| Sbjct: 555 gaacggcagcagctgtgaa 573 >gi|76288014|gb|DV027582.1|DV027582 ZM_BFb0149C01.r ZM_BFb Zea mays cDNA 5', mRNA sequence Length = 737 Score = 38.2 bits (19), Expect = 2.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 573 gaacggcagcagctgtgaa 591 ||||||||||||||||||| Sbjct: 606 gaacggcagcagctgtgaa 624 >gi|76910634|gb|DV163957.1|DV163957 ZM_BFb0160D07.r ZM_BFb Zea mays cDNA 5', mRNA sequence Length = 824 Score = 38.2 bits (19), Expect = 2.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 573 gaacggcagcagctgtgaa 591 ||||||||||||||||||| Sbjct: 550 gaacggcagcagctgtgaa 568 >gi|78081073|gb|DV509485.1|DV509485 ZM_BFb0188J19.r ZM_BFb Zea mays cDNA 5', mRNA sequence Length = 802 Score = 38.2 bits (19), Expect = 2.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 573 gaacggcagcagctgtgaa 591 ||||||||||||||||||| Sbjct: 547 gaacggcagcagctgtgaa 565 >gi|91053180|gb|EB163598.1|EB163598 ZM_BFb0311I22.r ZM_BFb Zea mays cDNA 5', mRNA sequence Length = 769 Score = 38.2 bits (19), Expect = 2.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 573 gaacggcagcagctgtgaa 591 ||||||||||||||||||| Sbjct: 533 gaacggcagcagctgtgaa 551 >gi|3420232|gb|AF058763.1|AF058763 Zea mays uroporphyrinogen decarboxylase (les22) mRNA, complete cds Length = 1663 Score = 38.2 bits (19), Expect = 2.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 573 gaacggcagcagctgtgaa 591 ||||||||||||||||||| Sbjct: 584 gaacggcagcagctgtgaa 602 >gi|21215717|gb|AY111127.1| Zea mays CL1743_1 mRNA sequence Length = 1602 Score = 38.2 bits (19), Expect = 2.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 573 gaacggcagcagctgtgaa 591 ||||||||||||||||||| Sbjct: 584 gaacggcagcagctgtgaa 602 >gi|21215717|gb|AY111127.1| Zea mays CL1743_1 mRNA sequence Length = 1602 Score = 38.2 bits (19), Expect = 2.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 573 gaacggcagcagctgtgaa 591 ||||||||||||||||||| Sbjct: 584 gaacggcagcagctgtgaa 602 >gi|3420232|gb|AF058763.1|AF058763 Zea mays uroporphyrinogen decarboxylase (les22) mRNA, complete cds Length = 1663 Score = 38.2 bits (19), Expect = 2.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 573 gaacggcagcagctgtgaa 591 ||||||||||||||||||| Sbjct: 584 gaacggcagcagctgtgaa 602 >gi|92110165|gb|AC185302.1| Zea mays chromosome UNK clone CH201-422E5; ZMMBBc0422E05, *** SEQUENCING IN PROGRESS ***, 23 unordered pieces Length = 177170 Score = 38.2 bits (19), Expect = 2.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 213 attctcagacacaaggaac 231 ||||||||||||||||||| Sbjct: 37278 attctcagacacaaggaac 37296 >gi|48762559|gb|AC145224.7| Zea mays clone ZMMBBc0062A01, *** SEQUENCING IN PROGRESS ***, 2 ordered pieces Length = 175294 Score = 38.2 bits (19), Expect = 2.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 837 ggaaggaagtggttgcaat 855 ||||||||||||||||||| Sbjct: 157466 ggaaggaagtggttgcaat 157448 >gi|5018420|gb|AI714613.1|AI714613 605068C05.x1 605 - Endosperm cDNA library from Schmidt lab Zea mays cDNA, mRNA sequence Length = 583 Score = 36.2 bits (18), Expect = 8.1 Identities = 18/18 (100%) Strand = Plus / Minus Query: 14 agagcccctccctgtccc 31 |||||||||||||||||| Sbjct: 237 agagcccctccctgtccc 220 >gi|5757159|gb|AI964446.1|AI964446 496010F03.x1 496 - stressed shoot cDNA library from Wang/Bohnert lab Zea mays cDNA, mRNA sequence Length = 536 Score = 36.2 bits (18), Expect = 8.1 Identities = 18/18 (100%) Strand = Plus / Minus Query: 14 agagcccctccctgtccc 31 |||||||||||||||||| Sbjct: 174 agagcccctccctgtccc 157 >gi|6403374|gb|AW171849.1|AW171849 618051E02.x1 618 - Inbred Tassel cDNA Library Zea mays cDNA, mRNA sequence Length = 620 Score = 36.2 bits (18), Expect = 8.1 Identities = 18/18 (100%) Strand = Plus / Minus Query: 14 agagcccctccctgtccc 31 |||||||||||||||||| Sbjct: 250 agagcccctccctgtccc 233 >gi|9732749|gb|BE511501.1|BE511501 946061C07.y1 946 - tassel primordium prepared by Schmidt lab Zea mays cDNA, mRNA sequence Length = 591 Score = 36.2 bits (18), Expect = 8.1 Identities = 18/18 (100%) Strand = Plus / Plus Query: 14 agagcccctccctgtccc 31 |||||||||||||||||| Sbjct: 468 agagcccctccctgtccc 485 >gi|9794387|gb|BE552695.1|BE552695 946083H10.y1 946 - tassel primordium prepared by Schmidt lab Zea mays cDNA, mRNA sequence Length = 338 Score = 36.2 bits (18), Expect = 8.1 Identities = 18/18 (100%) Strand = Plus / Plus Query: 14 agagcccctccctgtccc 31 |||||||||||||||||| Sbjct: 278 agagcccctccctgtccc 295 >gi|9794606|gb|BE552914.1|BE552914 946087C11.y1 946 - tassel primordium prepared by Schmidt lab Zea mays cDNA, mRNA sequence Length = 509 Score = 36.2 bits (18), Expect = 8.1 Identities = 18/18 (100%) Strand = Plus / Plus Query: 14 agagcccctccctgtccc 31 |||||||||||||||||| Sbjct: 241 agagcccctccctgtccc 258 >gi|9953450|gb|BE640033.1|BE640033 946044H08.x1 946 - tassel primordium prepared by Schmidt lab Zea mays cDNA, mRNA sequence Length = 446 Score = 36.2 bits (18), Expect = 8.1 Identities = 18/18 (100%) Strand = Plus / Minus Query: 14 agagcccctccctgtccc 31 |||||||||||||||||| Sbjct: 210 agagcccctccctgtccc 193 >gi|9961409|gb|BE644392.1|BE644392 946061F06.x2 946 - tassel primordium prepared by Schmidt lab Zea mays cDNA, mRNA sequence Length = 452 Score = 36.2 bits (18), Expect = 8.1 Identities = 18/18 (100%) Strand = Plus / Minus Query: 14 agagcccctccctgtccc 31 |||||||||||||||||| Sbjct: 220 agagcccctccctgtccc 203 >gi|14646169|gb|BI180373.1|BI180373 949029D03.x4 949 - Juvenile leaf and shoot cDNA from Steve Moose Zea mays cDNA, mRNA sequence Length = 453 Score = 36.2 bits (18), Expect = 8.1 Identities = 18/18 (100%) Strand = Plus / Minus Query: 958 cttgcaaagacaaggcaa 975 |||||||||||||||||| Sbjct: 383 cttgcaaagacaaggcaa 366 >gi|15082805|gb|BI389489.1|BI389489 949060H08.x1 949 - Juvenile leaf and shoot cDNA from Steve Moose Zea mays cDNA, mRNA sequence Length = 310 Score = 36.2 bits (18), Expect = 8.1 Identities = 18/18 (100%) Strand = Plus / Minus Query: 14 agagcccctccctgtccc 31 |||||||||||||||||| Sbjct: 193 agagcccctccctgtccc 176 >gi|15208896|gb|BI430780.1|BI430780 949060H08.y1 949 - Juvenile leaf and shoot cDNA from Steve Moose Zea mays cDNA, mRNA sequence Length = 356 Score = 36.2 bits (18), Expect = 8.1 Identities = 18/18 (100%) Strand = Plus / Plus Query: 14 agagcccctccctgtccc 31 |||||||||||||||||| Sbjct: 71 agagcccctccctgtccc 88 >gi|18174316|gb|BM349704.1|BM349704 MEST254-E03.T3 ISUM5-RN Zea mays cDNA clone MEST254-E03 3', mRNA sequence Length = 568 Score = 36.2 bits (18), Expect = 8.1 Identities = 18/18 (100%) Strand = Plus / Minus Query: 14 agagcccctccctgtccc 31 |||||||||||||||||| Sbjct: 288 agagcccctccctgtccc 271 >gi|21891694|gb|BQ744907.1|BQ744907 946112B08.y1 946 - tassel primordium prepared by Schmidt lab Zea mays cDNA, mRNA sequence Length = 552 Score = 36.2 bits (18), Expect = 8.1 Identities = 18/18 (100%) Strand = Plus / Plus Query: 14 agagcccctccctgtccc 31 |||||||||||||||||| Sbjct: 397 agagcccctccctgtccc 414 >gi|24766727|gb|CA401874.1|CA401874 EL01N0427G10.g Endosperm_4 Zea mays cDNA, mRNA sequence Length = 666 Score = 36.2 bits (18), Expect = 8.1 Identities = 18/18 (100%) Strand = Plus / Minus Query: 14 agagcccctccctgtccc 31 |||||||||||||||||| Sbjct: 295 agagcccctccctgtccc 278 >gi|26557941|gb|CA830176.1|CA830176 1117003D10.y1 1117 - Unigene V from Maize Genome Project Zea mays cDNA, mRNA sequence Length = 614 Score = 36.2 bits (18), Expect = 8.1 Identities = 18/18 (100%) Strand = Plus / Plus Query: 14 agagcccctccctgtccc 31 |||||||||||||||||| Sbjct: 483 agagcccctccctgtccc 500 >gi|28873495|gb|CB329477.1|CB329477 3529_1_30_1_E07.y_1 3529 - 2 mm ear tissue from Schmidt and Hake labs Zea mays cDNA, mRNA sequence Length = 587 Score = 36.2 bits (18), Expect = 8.1 Identities = 18/18 (100%) Strand = Plus / Plus Query: 14 agagcccctccctgtccc 31 |||||||||||||||||| Sbjct: 422 agagcccctccctgtccc 439 >gi|28983986|gb|BQ538888.2|BQ538888 MEST607-D07.T3 ISUM4-TN Zea mays cDNA clone MEST607-D07 3', mRNA sequence Length = 509 Score = 36.2 bits (18), Expect = 8.1 Identities = 18/18 (100%) Strand = Plus / Minus Query: 14 agagcccctccctgtccc 31 |||||||||||||||||| Sbjct: 232 agagcccctccctgtccc 215 >gi|28985532|gb|CB350688.1|CB350688 MEST254-E03.univ ISUM5-RN Zea mays cDNA clone MEST254-E03 3', mRNA sequence Length = 375 Score = 36.2 bits (18), Expect = 8.1 Identities = 18/18 (100%) Strand = Plus / Minus Query: 14 agagcccctccctgtccc 31 |||||||||||||||||| Sbjct: 285 agagcccctccctgtccc 268 >gi|31353367|gb|CD437724.1|CD437724 EL01N0504D02.b Endosperm_5 Zea mays cDNA, mRNA sequence Length = 848 Score = 36.2 bits (18), Expect = 8.1 Identities = 18/18 (100%) Strand = Plus / Plus Query: 958 cttgcaaagacaaggcaa 975 |||||||||||||||||| Sbjct: 798 cttgcaaagacaaggcaa 815 >gi|31359181|gb|CD443538.1|CD443538 EL01N0427G10.b Endosperm_4 Zea mays cDNA, mRNA sequence Length = 729 Score = 36.2 bits (18), Expect = 8.1 Identities = 18/18 (100%) Strand = Plus / Plus Query: 14 agagcccctccctgtccc 31 |||||||||||||||||| Sbjct: 492 agagcccctccctgtccc 509 >gi|32805592|gb|CD957826.1|CD957826 SCM_162 GeneTag2 Zea mays cDNA, mRNA sequence Length = 211 Score = 36.2 bits (18), Expect = 8.1 Identities = 18/18 (100%) Strand = Plus / Plus Query: 944 gtaagaagaggaaacttg 961 |||||||||||||||||| Sbjct: 51 gtaagaagaggaaacttg 68 >gi|32856652|gb|CD996333.1|CD996333 QBC2e07.xg QBC Zea mays cDNA clone QBC2e07, mRNA sequence Length = 330 Score = 36.2 bits (18), Expect = 8.1 Identities = 18/18 (100%) Strand = Plus / Plus Query: 14 agagcccctccctgtccc 31 |||||||||||||||||| Sbjct: 90 agagcccctccctgtccc 107 >gi|32857511|gb|CD997192.1|CD997192 QBD4e10.xg QBD Zea mays cDNA clone QBD4e10, mRNA sequence Length = 353 Score = 36.2 bits (18), Expect = 8.1 Identities = 18/18 (100%) Strand = Plus / Plus Query: 14 agagcccctccctgtccc 31 |||||||||||||||||| Sbjct: 92 agagcccctccctgtccc 109 >gi|32907075|gb|CF011888.1|CF011888 QBK13f06.pg QBK Zea mays cDNA clone QBK13f06, mRNA sequence Length = 499 Score = 36.2 bits (18), Expect = 8.1 Identities = 18/18 (100%) Strand = Plus / Minus Query: 958 cttgcaaagacaaggcaa 975 |||||||||||||||||| Sbjct: 484 cttgcaaagacaaggcaa 467 >gi|32912686|gb|CF017498.1|CF017498 QBM24h11.xg QBM Zea mays cDNA clone QBM24h11, mRNA sequence Length = 515 Score = 36.2 bits (18), Expect = 8.1 Identities = 18/18 (100%) Strand = Plus / Plus Query: 14 agagcccctccctgtccc 31 |||||||||||||||||| Sbjct: 285 agagcccctccctgtccc 302 >gi|32945474|gb|CF050293.1|CF050293 QCM10d01.yg QCM Zea mays cDNA clone QCM10d01, mRNA sequence Length = 488 Score = 36.2 bits (18), Expect = 8.1 Identities = 18/18 (100%) Strand = Plus / Plus Query: 14 agagcccctccctgtccc 31 |||||||||||||||||| Sbjct: 305 agagcccctccctgtccc 322 >gi|37382880|gb|CF628410.1|CF628410 zmrws48_0A10-005-e10.s1 zmrws48 Zea mays cDNA 3', mRNA sequence Length = 545 Score = 36.2 bits (18), Expect = 8.1 Identities = 18/18 (100%) Strand = Plus / Minus Query: 14 agagcccctccctgtccc 31 |||||||||||||||||| Sbjct: 222 agagcccctccctgtccc 205 >gi|37385240|gb|CF629750.1|CF629750 zmrws48_0A20-005-a03.s1 zmrws48 Zea mays cDNA 3', mRNA sequence Length = 571 Score = 36.2 bits (18), Expect = 8.1 Identities = 18/18 (100%) Strand = Plus / Minus Query: 14 agagcccctccctgtccc 31 |||||||||||||||||| Sbjct: 241 agagcccctccctgtccc 224 >gi|37391821|gb|CF633155.1|CF633155 zmrws48_0B20-012-c07.s4 zmrws48 Zea mays cDNA 3', mRNA sequence Length = 465 Score = 36.2 bits (18), Expect = 8.1 Identities = 18/18 (100%) Strand = Plus / Minus Query: 14 agagcccctccctgtccc 31 |||||||||||||||||| Sbjct: 257 agagcccctccctgtccc 240 >gi|37392928|gb|CF633717.1|CF633717 zmrww00_0A10-003-c09.s1 zmrww00 Zea mays cDNA 3', mRNA sequence Length = 723 Score = 36.2 bits (18), Expect = 8.1 Identities = 18/18 (100%) Strand = Plus / Minus Query: 14 agagcccctccctgtccc 31 |||||||||||||||||| Sbjct: 257 agagcccctccctgtccc 240 >gi|60339245|gb|DN206218.1|DN206218 MEST830_E11.T7-1 UGA-ZmSAM-XZ2 Zea mays cDNA, mRNA sequence Length = 654 Score = 36.2 bits (18), Expect = 8.1 Identities = 18/18 (100%) Strand = Plus / Minus Query: 14 agagcccctccctgtccc 31 |||||||||||||||||| Sbjct: 272 agagcccctccctgtccc 255 >gi|60340432|gb|DN207405.1|DN207405 MEST848_B05.T7-1 UGA-ZmSAM-XZ2 Zea mays cDNA, mRNA sequence Length = 728 Score = 36.2 bits (18), Expect = 8.1 Identities = 18/18 (100%) Strand = Plus / Minus Query: 958 cttgcaaagacaaggcaa 975 |||||||||||||||||| Sbjct: 139 cttgcaaagacaaggcaa 122 >gi|60344555|gb|DN211528.1|DN211528 MEST925_F12.T7-1 UGA-ZmSAM-XZ2 Zea mays cDNA, mRNA sequence Length = 555 Score = 36.2 bits (18), Expect = 8.1 Identities = 18/18 (100%) Strand = Plus / Plus Query: 14 agagcccctccctgtccc 31 |||||||||||||||||| Sbjct: 424 agagcccctccctgtccc 441 >gi|60348115|gb|DN215088.1|DN215088 MEST907_G05.T7-1 UGA-ZmSAM-XZ2 Zea mays cDNA, mRNA sequence Length = 681 Score = 36.2 bits (18), Expect = 8.1 Identities = 18/18 (100%) Strand = Plus / Minus Query: 14 agagcccctccctgtccc 31 |||||||||||||||||| Sbjct: 242 agagcccctccctgtccc 225 >gi|60395979|gb|DN228849.1|DN228849 MEST1004_E10.T7-1 UGA-ZmSAM-XZ2 Zea mays cDNA, mRNA sequence Length = 586 Score = 36.2 bits (18), Expect = 8.1 Identities = 18/18 (100%) Strand = Plus / Minus Query: 14 agagcccctccctgtccc 31 |||||||||||||||||| Sbjct: 244 agagcccctccctgtccc 227 >gi|60399333|gb|DN232147.1|DN232147 MEST1201_A10.T7-1 UGA-ZmSAM-XZ2 Zea mays cDNA, mRNA sequence Length = 586 Score = 36.2 bits (18), Expect = 8.1 Identities = 18/18 (100%) Strand = Plus / Minus Query: 14 agagcccctccctgtccc 31 |||||||||||||||||| Sbjct: 244 agagcccctccctgtccc 227 >gi|67012046|gb|CO440795.1|CO440795 MZCCS10002H04.g Maize Endosperm cDNA Library Zea mays cDNA, mRNA sequence Length = 666 Score = 36.2 bits (18), Expect = 8.1 Identities = 18/18 (100%) Strand = Plus / Plus Query: 709 caagggccaaatggatgc 726 |||||||||||||||||| Sbjct: 378 caagggccaaatggatgc 395 >gi|67020240|gb|CO448989.1|CO448989 MZCCL10135A12.g Maize Endosperm cDNA Library Zea mays cDNA, mRNA sequence Length = 772 Score = 36.2 bits (18), Expect = 8.1 Identities = 18/18 (100%) Strand = Plus / Plus Query: 14 agagcccctccctgtccc 31 |||||||||||||||||| Sbjct: 511 agagcccctccctgtccc 528 >gi|67023659|gb|CO452408.1|CO452408 MZCCL10176B03.g Maize Endosperm cDNA Library Zea mays cDNA, mRNA sequence Length = 803 Score = 36.2 bits (18), Expect = 8.1 Identities = 18/18 (100%) Strand = Plus / Plus Query: 14 agagcccctccctgtccc 31 |||||||||||||||||| Sbjct: 560 agagcccctccctgtccc 577 >gi|67032131|gb|CO460880.1|CO460880 MZCCS15022E05.g Maize Endosperm cDNA Library Zea mays cDNA, mRNA sequence Length = 635 Score = 36.2 bits (18), Expect = 8.1 Identities = 18/18 (100%) Strand = Plus / Plus Query: 709 caagggccaaatggatgc 726 |||||||||||||||||| Sbjct: 383 caagggccaaatggatgc 400 >gi|71304394|gb|DR788310.1|DR788310 ZM_BFb0006E08.r ZM_BFb Zea mays cDNA 5', mRNA sequence Length = 808 Score = 36.2 bits (18), Expect = 8.1 Identities = 21/22 (95%) Strand = Plus / Minus Query: 914 tcatccttggcttctggactca 935 |||||||||||||||| ||||| Sbjct: 449 tcatccttggcttctgcactca 428 >gi|71433976|gb|DR815026.1|DR815026 ZM_BFb0044P13.f ZM_BFb Zea mays cDNA 3', mRNA sequence Length = 700 Score = 36.2 bits (18), Expect = 8.1 Identities = 18/18 (100%) Strand = Plus / Minus Query: 958 cttgcaaagacaaggcaa 975 |||||||||||||||||| Sbjct: 482 cttgcaaagacaaggcaa 465 >gi|71433977|gb|DR815027.1|DR815027 ZM_BFb0044P13.r ZM_BFb Zea mays cDNA 5', mRNA sequence Length = 875 Score = 36.2 bits (18), Expect = 8.1 Identities = 18/18 (100%) Strand = Plus / Plus Query: 958 cttgcaaagacaaggcaa 975 |||||||||||||||||| Sbjct: 777 cttgcaaagacaaggcaa 794 >gi|76011004|gb|DT938174.1|DT938174 ZM_BFb0117P19.f ZM_BFb Zea mays cDNA 3', mRNA sequence Length = 728 Score = 36.2 bits (18), Expect = 8.1 Identities = 18/18 (100%) Strand = Plus / Minus Query: 958 cttgcaaagacaaggcaa 975 |||||||||||||||||| Sbjct: 443 cttgcaaagacaaggcaa 426 >gi|76011005|gb|DT938175.1|DT938175 ZM_BFb0117P19.r ZM_BFb Zea mays cDNA 5', mRNA sequence Length = 804 Score = 36.2 bits (18), Expect = 8.1 Identities = 18/18 (100%) Strand = Plus / Plus Query: 958 cttgcaaagacaaggcaa 975 |||||||||||||||||| Sbjct: 776 cttgcaaagacaaggcaa 793 >gi|76924807|gb|DV170138.1|DV170138 ZM_BFb0169I12.f ZM_BFb Zea mays cDNA 3', mRNA sequence Length = 723 Score = 36.2 bits (18), Expect = 8.1 Identities = 18/18 (100%) Strand = Plus / Minus Query: 14 agagcccctccctgtccc 31 |||||||||||||||||| Sbjct: 234 agagcccctccctgtccc 217 >gi|76924808|gb|DV170139.1|DV170139 ZM_BFb0169I12.r ZM_BFb Zea mays cDNA 5', mRNA sequence Length = 723 Score = 36.2 bits (18), Expect = 8.1 Identities = 18/18 (100%) Strand = Plus / Plus Query: 14 agagcccctccctgtccc 31 |||||||||||||||||| Sbjct: 490 agagcccctccctgtccc 507 >gi|78025915|gb|DV494302.1|DV494302 1000207-B03.T7-1 UGI-Reseq Zea mays cDNA, mRNA sequence Length = 679 Score = 36.2 bits (18), Expect = 8.1 Identities = 18/18 (100%) Strand = Plus / Minus Query: 14 agagcccctccctgtccc 31 |||||||||||||||||| Sbjct: 274 agagcccctccctgtccc 257 >gi|78080885|gb|DV509297.1|DV509297 ZM_BFb0188F04.f ZM_BFb Zea mays cDNA 3', mRNA sequence Length = 668 Score = 36.2 bits (18), Expect = 8.1 Identities = 18/18 (100%) Strand = Plus / Minus Query: 958 cttgcaaagacaaggcaa 975 |||||||||||||||||| Sbjct: 345 cttgcaaagacaaggcaa 328 >gi|78080886|gb|DV509298.1|DV509298 ZM_BFb0188F04.r ZM_BFb Zea mays cDNA 5', mRNA sequence Length = 806 Score = 36.2 bits (18), Expect = 8.1 Identities = 18/18 (100%) Strand = Plus / Plus Query: 958 cttgcaaagacaaggcaa 975 |||||||||||||||||| Sbjct: 786 cttgcaaagacaaggcaa 803 >gi|78104452|gb|DV522870.1|DV522870 ZM_BFb0208N08.f ZM_BFb Zea mays cDNA 3', mRNA sequence Length = 747 Score = 36.2 bits (18), Expect = 8.1 Identities = 18/18 (100%) Strand = Plus / Minus Query: 958 cttgcaaagacaaggcaa 975 |||||||||||||||||| Sbjct: 368 cttgcaaagacaaggcaa 351 >gi|78545105|gb|DV622603.1|DV622603 IV-1091-404B-D01.T7-1 UGIV-1091-Reseq Zea mays cDNA, mRNA sequence Length = 697 Score = 36.2 bits (18), Expect = 8.1 Identities = 18/18 (100%) Strand = Plus / Minus Query: 958 cttgcaaagacaaggcaa 975 |||||||||||||||||| Sbjct: 449 cttgcaaagacaaggcaa 432 >gi|84976708|gb|DW475130.1|DW475130 0177 Zea mays central cell cDNA library Zea mays cDNA clone CC0177, mRNA sequence Length = 305 Score = 36.2 bits (18), Expect = 8.1 Identities = 18/18 (100%) Strand = Plus / Plus Query: 14 agagcccctccctgtccc 31 |||||||||||||||||| Sbjct: 144 agagcccctccctgtccc 161 >gi|84977219|gb|DW475641.1|DW475641 0714 Zea mays central cell cDNA library Zea mays cDNA clone CC0714, mRNA sequence Length = 424 Score = 36.2 bits (18), Expect = 8.1 Identities = 18/18 (100%) Strand = Plus / Plus Query: 14 agagcccctccctgtccc 31 |||||||||||||||||| Sbjct: 152 agagcccctccctgtccc 169 >gi|84977381|gb|DW475803.1|DW475803 0886 Zea mays central cell cDNA library Zea mays cDNA clone CC0886, mRNA sequence Length = 494 Score = 36.2 bits (18), Expect = 8.1 Identities = 18/18 (100%) Strand = Plus / Plus Query: 14 agagcccctccctgtccc 31 |||||||||||||||||| Sbjct: 222 agagcccctccctgtccc 239 >gi|87157156|gb|DY401945.1|DY401945 V-946-2D-B04.T7-1 UGV-Reseq Zea mays cDNA, mRNA sequence Length = 677 Score = 36.2 bits (18), Expect = 8.1 Identities = 18/18 (100%) Strand = Plus / Minus Query: 958 cttgcaaagacaaggcaa 975 |||||||||||||||||| Sbjct: 466 cttgcaaagacaaggcaa 449 >gi|91877359|gb|EB407316.1|EB407316 ZM_BFb0319H02.r ZM_BFb Zea mays cDNA 5', mRNA sequence Length = 740 Score = 36.2 bits (18), Expect = 8.1 Identities = 21/22 (95%) Strand = Plus / Minus Query: 144 tgctagttctcagcagtgcata 165 |||||| ||||||||||||||| Sbjct: 292 tgctagatctcagcagtgcata 271 >gi|54652357|gb|BT017576.1| Zea mays clone EL01N0427G10.c mRNA sequence Length = 729 Score = 36.2 bits (18), Expect = 8.1 Identities = 18/18 (100%) Strand = Plus / Plus Query: 14 agagcccctccctgtccc 31 |||||||||||||||||| Sbjct: 492 agagcccctccctgtccc 509 >gi|54653419|gb|BT018638.1| Zea mays clone EL01N0504D02.d mRNA sequence Length = 1286 Score = 36.2 bits (18), Expect = 8.1 Identities = 18/18 (100%) Strand = Plus / Plus Query: 958 cttgcaaagacaaggcaa 975 |||||||||||||||||| Sbjct: 798 cttgcaaagacaaggcaa 815 >gi|21207318|gb|AY104240.1| Zea mays PCO085368 mRNA sequence Length = 849 Score = 36.2 bits (18), Expect = 8.1 Identities = 18/18 (100%) Strand = Plus / Plus Query: 14 agagcccctccctgtccc 31 |||||||||||||||||| Sbjct: 564 agagcccctccctgtccc 581 >gi|21208162|gb|AY105084.1| Zea mays PCO124492 mRNA sequence Length = 2949 Score = 36.2 bits (18), Expect = 8.1 Identities = 21/22 (95%) Strand = Plus / Minus Query: 858 agtaagcacactagtgattgca 879 ||||||||||||| |||||||| Sbjct: 2355 agtaagcacactaatgattgca 2334 >gi|45589365|gb|BV119992.1| PZA01384 CML69 Zea mays CML69 Zea mays STS genomic, sequence tagged site Length = 309 Score = 36.2 bits (18), Expect = 8.1 Identities = 18/18 (100%) Strand = Plus / Plus Query: 14 agagcccctccctgtccc 31 |||||||||||||||||| Sbjct: 87 agagcccctccctgtccc 104 >gi|45589364|gb|BV119991.1| PZA01384 CML322 Zea mays CML322 Zea mays STS genomic, sequence tagged site Length = 334 Score = 36.2 bits (18), Expect = 8.1 Identities = 18/18 (100%) Strand = Plus / Plus Query: 14 agagcccctccctgtccc 31 |||||||||||||||||| Sbjct: 108 agagcccctccctgtccc 125 >gi|45589363|gb|BV119990.1| PZA01384 CML333 Zea mays CML333 Zea mays STS genomic, sequence tagged site Length = 315 Score = 36.2 bits (18), Expect = 8.1 Identities = 18/18 (100%) Strand = Plus / Plus Query: 14 agagcccctccctgtccc 31 |||||||||||||||||| Sbjct: 92 agagcccctccctgtccc 109 >gi|45589361|gb|BV119988.1| PZA01384 Kul3 Zea mays Kul3 Zea mays STS genomic, sequence tagged site Length = 318 Score = 36.2 bits (18), Expect = 8.1 Identities = 18/18 (100%) Strand = Plus / Plus Query: 14 agagcccctccctgtccc 31 |||||||||||||||||| Sbjct: 87 agagcccctccctgtccc 104 >gi|45589360|gb|BV119987.1| PZA01384 NC350 Zea mays NC350 Zea mays STS genomic, sequence tagged site Length = 301 Score = 36.2 bits (18), Expect = 8.1 Identities = 18/18 (100%) Strand = Plus / Plus Query: 14 agagcccctccctgtccc 31 |||||||||||||||||| Sbjct: 102 agagcccctccctgtccc 119 >gi|45589359|gb|BV119986.1| PZA01384 CML247 Zea mays CML247 Zea mays STS genomic, sequence tagged site Length = 338 Score = 36.2 bits (18), Expect = 8.1 Identities = 18/18 (100%) Strand = Plus / Plus Query: 14 agagcccctccctgtccc 31 |||||||||||||||||| Sbjct: 106 agagcccctccctgtccc 123 >gi|45589358|gb|BV119985.1| PZA01384 Hp301 Zea mays Hp301 Zea mays STS genomic, sequence tagged site Length = 337 Score = 36.2 bits (18), Expect = 8.1 Identities = 18/18 (100%) Strand = Plus / Plus Query: 14 agagcccctccctgtccc 31 |||||||||||||||||| Sbjct: 106 agagcccctccctgtccc 123 >gi|45589357|gb|BV119984.1| PZA01384 M37W Zea mays M37W Zea mays STS genomic, sequence tagged site Length = 338 Score = 36.2 bits (18), Expect = 8.1 Identities = 18/18 (100%) Strand = Plus / Plus Query: 14 agagcccctccctgtccc 31 |||||||||||||||||| Sbjct: 106 agagcccctccctgtccc 123 >gi|45589356|gb|BV119983.1| PZA01384 Ky21 Zea mays Ky21 Zea mays STS genomic, sequence tagged site Length = 340 Score = 36.2 bits (18), Expect = 8.1 Identities = 18/18 (100%) Strand = Plus / Plus Query: 14 agagcccctccctgtccc 31 |||||||||||||||||| Sbjct: 108 agagcccctccctgtccc 125 >gi|45589355|gb|BV119982.1| PZA01384 Mo17(2) Zea mays Mo17(2) Zea mays STS genomic, sequence tagged site Length = 310 Score = 36.2 bits (18), Expect = 8.1 Identities = 18/18 (100%) Strand = Plus / Plus Query: 14 agagcccctccctgtccc 31 |||||||||||||||||| Sbjct: 87 agagcccctccctgtccc 104 >gi|45589354|gb|BV119981.1| PZA01384 Mo17(1) Zea mays Mo17(1) Zea mays STS genomic, sequence tagged site Length = 332 Score = 36.2 bits (18), Expect = 8.1 Identities = 18/18 (100%) Strand = Plus / Plus Query: 14 agagcccctccctgtccc 31 |||||||||||||||||| Sbjct: 108 agagcccctccctgtccc 125 >gi|45589353|gb|BV119980.1| PZA01384 Il14H Zea mays Il14H Zea mays STS genomic, sequence tagged site Length = 336 Score = 36.2 bits (18), Expect = 8.1 Identities = 18/18 (100%) Strand = Plus / Plus Query: 14 agagcccctccctgtccc 31 |||||||||||||||||| Sbjct: 108 agagcccctccctgtccc 125 >gi|45589352|gb|BV119979.1| PZA01384 Oh43 Zea mays Oh43 Zea mays STS genomic, sequence tagged site Length = 341 Score = 36.2 bits (18), Expect = 8.1 Identities = 18/18 (100%) Strand = Plus / Plus Query: 14 agagcccctccctgtccc 31 |||||||||||||||||| Sbjct: 108 agagcccctccctgtccc 125 >gi|45589351|gb|BV119978.1| PZA01384 B73(2) Zea mays B73(2) Zea mays STS genomic, sequence tagged site Length = 316 Score = 36.2 bits (18), Expect = 8.1 Identities = 18/18 (100%) Strand = Plus / Plus Query: 14 agagcccctccctgtccc 31 |||||||||||||||||| Sbjct: 106 agagcccctccctgtccc 123 >gi|45589350|gb|BV119977.1| PZA01384 B73(1) Zea mays B73(1) Zea mays STS genomic, sequence tagged site Length = 339 Score = 36.2 bits (18), Expect = 8.1 Identities = 18/18 (100%) Strand = Plus / Plus Query: 14 agagcccctccctgtccc 31 |||||||||||||||||| Sbjct: 107 agagcccctccctgtccc 124 >gi|54653419|gb|BT018638.1| Zea mays clone EL01N0504D02.d mRNA sequence Length = 1286 Score = 36.2 bits (18), Expect = 8.1 Identities = 18/18 (100%) Strand = Plus / Plus Query: 958 cttgcaaagacaaggcaa 975 |||||||||||||||||| Sbjct: 798 cttgcaaagacaaggcaa 815 >gi|54652357|gb|BT017576.1| Zea mays clone EL01N0427G10.c mRNA sequence Length = 729 Score = 36.2 bits (18), Expect = 8.1 Identities = 18/18 (100%) Strand = Plus / Plus Query: 14 agagcccctccctgtccc 31 |||||||||||||||||| Sbjct: 492 agagcccctccctgtccc 509 >gi|38607381|gb|AY359582.1| Zea mays B73 Etr2-like ethylene receptor (ETR6) pseudogene, partial sequence Length = 8579 Score = 36.2 bits (18), Expect = 8.1 Identities = 21/22 (95%) Strand = Plus / Minus Query: 858 agtaagcacactagtgattgca 879 ||||||||||||| |||||||| Sbjct: 7925 agtaagcacactaatgattgca 7904 >gi|38607377|gb|AY359580.1| Zea mays B73 ethylene receptor (ETR9) gene, complete cds Length = 5707 Score = 36.2 bits (18), Expect = 8.1 Identities = 21/22 (95%) Strand = Plus / Minus Query: 858 agtaagcacactagtgattgca 879 ||||||||||||| |||||||| Sbjct: 4387 agtaagcacactaatgattgca 4366 >gi|21208162|gb|AY105084.1| Zea mays PCO124492 mRNA sequence Length = 2949 Score = 36.2 bits (18), Expect = 8.1 Identities = 21/22 (95%) Strand = Plus / Minus Query: 858 agtaagcacactagtgattgca 879 ||||||||||||| |||||||| Sbjct: 2355 agtaagcacactaatgattgca 2334 >gi|21207318|gb|AY104240.1| Zea mays PCO085368 mRNA sequence Length = 849 Score = 36.2 bits (18), Expect = 8.1 Identities = 18/18 (100%) Strand = Plus / Plus Query: 14 agagcccctccctgtccc 31 |||||||||||||||||| Sbjct: 564 agagcccctccctgtccc 581 >gi|90265901|gb|AC183908.1| Zea mays chromosome UNK clone ZMMBBb-490M5; ZMMBBb0490M05, *** SEQUENCING IN PROGRESS ***, 22 unordered pieces Length = 141383 Score = 36.2 bits (18), Expect = 8.1 Identities = 18/18 (100%) Strand = Plus / Minus Query: 893 tagctctgctagtgcttc 910 |||||||||||||||||| Sbjct: 72818 tagctctgctagtgcttc 72801 >gi|58082436|gb|AC155577.2| Zea mays strain B73 clone ZMMBBc0186N10, *** SEQUENCING IN PROGRESS ***, 26 unordered pieces Length = 179642 Score = 36.2 bits (18), Expect = 8.1 Identities = 21/22 (95%) Strand = Plus / Plus Query: 736 aatgaatgcatcaccagaaatc 757 |||||||||||| ||||||||| Sbjct: 123340 aatgaatgcatccccagaaatc 123361 Database: mais_NCBI.fasta Posted date: Apr 26, 2006 11:51 AM Number of letters in database: 669,372,029 Number of sequences in database: 836,351 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 361,033 Number of Sequences: 836351 Number of extensions: 361033 Number of successful extensions: 27979 Number of sequences better than 10.0: 114 Number of HSP's better than 10.0 without gapping: 114 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 27785 Number of HSP's gapped (non-prelim): 191 length of query: 980 length of database: 669,372,029 effective HSP length: 19 effective length of query: 961 effective length of database: 653,481,360 effective search space: 627995586960 effective search space used: 627995586960 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 18 (36.2 bits)