BLASTN 2.2.6 [Apr-09-2003] BLASTN 2.2.6 [Apr-09-2003] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= 3922840.2.1 (683 letters) Database: mais_NCBI.fasta 836,351 sequences; 669,372,029 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|78179138|gb|DV549511.1|DV549511 1000067-E02.GAD10-F UGI-Reseq... 942 0.0 gi|7262320|gb|AW585263.1|AW585263 707093F05.x3 707 - Mixed adult... 930 0.0 gi|12058259|gb|BF728805.2|BF728805 1000067E02.x2 1000 - Unigene ... 914 0.0 gi|71764705|gb|DR962642.1|DR962642 ZM_BFb0081D24.r ZM_BFb Zea ma... 825 0.0 gi|89759674|gb|DY688419.1|DY688419 ZM_BFb0282J19.r ZM_BFb Zea ma... 825 0.0 gi|21210054|gb|AY106976.1| Zea mays PCO125554 mRNA sequence 825 0.0 gi|21210054|gb|AY106976.1| Zea mays PCO125554 mRNA sequence 825 0.0 gi|21439755|emb|AX406847.1| Sequence 8 from Patent WO0222821 825 0.0 gi|71764704|gb|DR962641.1|DR962641 ZM_BFb0081D24.f ZM_BFb Zea ma... 815 0.0 gi|7227526|gb|AW566167.1|AW566167 660062H08.y1 660 - Mixed stage... 735 0.0 gi|7135510|gb|AW498122.1|AW498122 660042A02.x3 660 - Mixed stage... 591 e-167 gi|7135136|gb|AW497934.1|AW497934 660042A02.y1 660 - Mixed stage... 583 e-164 gi|8930097|gb|BE224935.1|BE224935 946016D10.x1 946 - tassel prim... 424 e-117 gi|76589478|gb|DQ207707.1| Zea mays cultivar inbred line Mo17 ID... 285 4e-75 gi|76589477|gb|DQ207706.1| Zea mays cultivar B73 IDP449 marker 276 3e-72 gi|12970314|gb|BG266921.1|BG266921 1000108G06.x2 1000 - Unigene ... 80 4e-13 gi|31358832|gb|CD443189.1|CD443189 EL01N0423B05.b Endosperm_4 Ze... 80 4e-13 gi|67010674|gb|CO439423.1|CO439423 MZCCL10006E06.g Maize Endospe... 80 4e-13 gi|67019177|gb|CO447926.1|CO447926 MZCCL10117C05.g Maize Endospe... 80 4e-13 gi|67025695|gb|CO454444.1|CO454444 MZCCL10204B03.g Maize Endospe... 80 4e-13 gi|67039592|gb|CO465847.1|CO465847 MZCCL20039C02.g Maize Endospe... 80 4e-13 gi|54652328|gb|BT017547.1| Zea mays clone EL01N0423B05.c mRNA se... 80 4e-13 gi|54652328|gb|BT017547.1| Zea mays clone EL01N0423B05.c mRNA se... 80 4e-13 gi|58082299|gb|AC155437.2| Zea mays strain B73 clone ZMMBBb0265G... 80 4e-13 gi|24766455|gb|CA401609.1|CA401609 EL01N0423B05.g Endosperm_4 Ze... 66 6e-09 gi|5525234|gb|AI861232.1|AI861232 603011F05.x1 603 - stressed ro... 48 0.001 gi|5761820|gb|AI966973.1|AI966973 496016B09.x1 496 - stressed sh... 48 0.001 gi|6195010|gb|AW147114.1|AW147114 707013D08.x1 707 - Mixed adult... 48 0.001 gi|6195043|gb|AW147147.1|AW147147 707013D08.y6 707 - Mixed adult... 48 0.001 gi|6827800|gb|AW331443.1|AW331443 707013D08.y4 707 - Mixed adult... 48 0.001 gi|9953529|gb|BE640112.1|BE640112 946046E12.y1 946 - tassel prim... 48 0.001 gi|14244374|gb|BG842418.2|BG842418 MEST30-F07.T3 ISUM4-TN Zea ma... 48 0.001 gi|28986926|gb|CB351377.1|CB351377 3529_1_22_1_B10.x_4 3529 - 2 ... 48 0.001 gi|29129744|gb|CB380448.1|CB380448 3529_1_22_1_B10.y_2 3529 - 2 ... 48 0.001 gi|50335001|gb|CO530127.1|CO530127 3530_1_199_1_E02.x_1 3530 - F... 48 0.001 gi|50335002|gb|CO530128.1|CO530128 3530_1_199_1_E02.y_1 3530 - F... 48 0.001 gi|60350418|gb|DN217391.1|DN217391 MEST1050_E07.T7-1 UGA-ZmSAM-X... 48 0.001 gi|71447667|gb|DR828717.1|DR828717 ZM_BFb0073P07.r ZM_BFb Zea ma... 48 0.001 gi|78114096|gb|DV532485.1|DV532485 ZM_BFb0223D02.f ZM_BFb Zea ma... 48 0.001 gi|78114097|gb|DV532486.1|DV532486 ZM_BFb0223D02.r ZM_BFb Zea ma... 48 0.001 gi|85152517|gb|DW587761.1|DW587761 E3484 Zea mays egg cell cDNA ... 48 0.001 gi|89251552|gb|DY623338.1|DY623338 ZM_BFb0294D10.f ZM_BFb Zea ma... 48 0.001 gi|21210817|gb|AY107739.1| Zea mays PCO089350 mRNA sequence 48 0.001 gi|21210817|gb|AY107739.1| Zea mays PCO089350 mRNA sequence 48 0.001 gi|21439757|emb|AX406848.1| Sequence 9 from Patent WO0222821 48 0.001 gi|18173504|gb|BM348892.1|BM348892 MEST303-C12.T3 ISUM5-RN Zea m... 40 0.36 gi|28931035|gb|CB334396.1|CB334396 3529_1_22_1_B10.x_2 3529 - 2 ... 40 0.36 gi|78022838|gb|DV491225.1|DV491225 1000125-H09.T7-1 UGI-Reseq Ze... 40 0.36 gi|984426|gb|G10793.1|G10793 php20075 F maize DGrant5 Zea mays S... 40 0.36 gi|66803566|gb|DQ059321.1| Zea mays RFLP core bin marker probe p... 40 0.36 gi|21439753|emb|AX406846.1| Sequence 7 from Patent WO0222821 40 0.36 gi|92899646|gb|AC185417.1| Zea mays chromosome UNK clone CH201-5... 40 0.36 gi|85861444|gb|AC177934.1| Zea mays chromosome UNK clone CH201-1... 40 0.36 gi|58082274|gb|AC155412.2| Zea mays strain B73 clone ZMMBBb0191E... 40 0.36 gi|7145272|gb|AW506753.1|AW506753 660059F11.x1 660 - Mixed stage... 38 1.4 gi|14585582|gb|BI135334.1|BI135334 949036C01.x2 949 - Juvenile l... 38 1.4 gi|30160690|gb|CB924419.1|CB924419 EST1512 Zea mays sperm cell c... 38 1.4 gi|60348311|gb|DN215284.1|DN215284 MEST913_C11.T7-1 UGA-ZmSAM-XZ... 38 1.4 gi|71316970|gb|DR795168.1|DR795168 ZM_BFb0016D06.f ZM_BFb Zea ma... 38 1.4 gi|76016769|gb|DT943939.1|DT943939 ZM_BFb0130C24.f ZM_BFb Zea ma... 38 1.4 gi|21210822|gb|AY107744.1| Zea mays PCO069826 mRNA sequence 38 1.4 gi|45665157|gb|BV125634.1| PZA00102 Zea mays ssp. parviglumis Be... 38 1.4 gi|45665152|gb|BV125629.1| PZA00102 Zea mays ssp. parviglumis CI... 38 1.4 gi|45665148|gb|BV125625.1| PZA00102 Zea mays ssp. parviglumis JS... 38 1.4 gi|45665145|gb|BV125622.1| PZA00102 Zea mays ssp. parviglumis JS... 38 1.4 gi|45665142|gb|BV125619.1| PZA00102 Zea mays ssp. mays CML69 Zea... 38 1.4 gi|45665140|gb|BV125617.1| PZA00102 Zea mays ssp. mays CML333 Ze... 38 1.4 gi|45665139|gb|BV125616.1| PZA00102 Zea mays ssp. mays Kul11 Zea... 38 1.4 gi|21210822|gb|AY107744.1| Zea mays PCO069826 mRNA sequence 38 1.4 gi|6691057|gb|AF205795.1| Zea mays subsp. mays cultivar Cacahuac... 38 1.4 gi|89274329|gb|AC182413.3| Zea mays chromosome UNK clone ZMMBBb-... 38 1.4 gi|4152178|gb|AI372312.1|AI372312 au05d08.x1 maize ear glume lib... 36 5.6 gi|5740144|gb|AI947834.1|AI947834 603029D02.x1 603 - stressed ro... 36 5.6 gi|6964698|gb|AW433391.1|AW433391 707068A11.x1 707 - Mixed adult... 36 5.6 gi|21809918|gb|BQ668236.1|BQ668236 946104C06.y1 946 - tassel pri... 36 5.6 gi|26557851|gb|CA830086.1|CA830086 1117002B02.y1 1117 - Unigene ... 36 5.6 gi|32919405|gb|CF024217.1|CF024217 QBS2e10.xg QBS Zea mays cDNA ... 36 5.6 gi|71300453|gb|DR786286.1|DR786286 ZM_BFb0003C12.r ZM_BFb Zea ma... 36 5.6 gi|71773683|gb|DR971580.1|DR971580 ZM_BFb0094F13.r ZM_BFb Zea ma... 36 5.6 gi|88757014|gb|DY541155.1|DY541155 ZM_BFb0358P15.r ZM_BFb Zea ma... 36 5.6 gi|22606061|dbj|BD060455.1| Secreted expressed sequence tags (sE... 36 5.6 gi|40794996|gb|AY506529.1| Zea mays strain NB mitochondrion, com... 36 5.6 gi|91982805|gb|AC185261.1| Zea mays chromosome UNK clone CH201-3... 36 5.6 gi|58082364|gb|AC155504.2| Zea mays strain B73 clone ZMMBBc0036K... 36 5.6 >gi|78179138|gb|DV549511.1|DV549511 1000067-E02.GAD10-F UGI-Reseq Zea mays cDNA, mRNA sequence Length = 590 Score = 942 bits (475), Expect = 0.0 Identities = 475/475 (100%) Strand = Plus / Plus Query: 199 aagctaggtagtactcctatatatgtaggtgtcatgtctttttggcaaagctgctgatgc 258 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 116 aagctaggtagtactcctatatatgtaggtgtcatgtctttttggcaaagctgctgatgc 175 Query: 259 tgggaaccacggtggatggatcacgggcacttgtgctggccgtcgtgggtcttcatgttg 318 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 176 tgggaaccacggtggatggatcacgggcacttgtgctggccgtcgtgggtcttcatgttg 235 Query: 319 gcgtagcaggggcagacgtcctcgttgccggaggtgcccggcgggacgcagccgcagcgc 378 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 236 gcgtagcaggggcagacgtcctcgttgccggaggtgcccggcgggacgcagccgcagcgc 295 Query: 379 tggcagcaggtgccgcacgccctcaggcacatcttgggccgccccgacttgctgcaccgg 438 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 296 tggcagcaggtgccgcacgccctcaggcacatcttgggccgccccgacttgctgcaccgg 355 Query: 439 tacgagcagctcgcgccgcagtcgatggcttcagcctgtccatggggagaagtagtggtc 498 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 356 tacgagcagctcgcgccgcagtcgatggcttcagcctgtccatggggagaagtagtggtc 415 Query: 499 tccacgaggagcagcaggacgacgagcgagagcgagaagagcagcctgctgctcgccttg 558 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 416 tccacgaggagcagcaggacgacgagcgagagcgagaagagcagcctgctgctcgccttg 475 Query: 559 gccatggtggaaggttggcttcttgcctgcttaattccttgcacgagagaggccagagat 618 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 476 gccatggtggaaggttggcttcttgcctgcttaattccttgcacgagagaggccagagat 535 Query: 619 cgacacgggccggtggtatggttggttactctactctgccttgcgcgagagagag 673 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 536 cgacacgggccggtggtatggttggttactctactctgccttgcgcgagagagag 590 Score = 143 bits (72), Expect = 3e-32 Identities = 72/72 (100%) Strand = Plus / Plus Query: 110 actattatataatatgttcatttatttattcatgcatgcacgcgcacaatataatgaacc 169 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27 actattatataatatgttcatttatttattcatgcatgcacgcgcacaatataatgaacc 86 Query: 170 aacaggtagtag 181 |||||||||||| Sbjct: 87 aacaggtagtag 98 >gi|7262320|gb|AW585263.1|AW585263 707093F05.x3 707 - Mixed adult tissues from Walbot lab (SK) Zea mays cDNA, mRNA sequence Length = 538 Score = 930 bits (469), Expect = 0.0 Identities = 481/485 (99%) Strand = Plus / Plus Query: 199 aagctaggtagtactcctatatatgtaggtgtcatgtctttttggcaaagctgctgatgc 258 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 54 aagctaggtagtactcctatatatgtaggtgtcatgtctttttggcaaagctgctgatgc 113 Query: 259 tgggaaccacggtggatggatcacgggcacttgtgctggccgtcgtgggtcttcatgttg 318 |||||||||||||||||||||||||||| | | |||||||||||||||||||||||||| Sbjct: 114 tgggaaccacggtggatggatcacgggcgcgggggctggccgtcgtgggtcttcatgttg 173 Query: 319 gcgtagcaggggcagacgtcctcgttgccggaggtgcccggcgggacgcagccgcagcgc 378 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 174 gcgtagcaggggcagacgtcctcgttgccggaggtgcccggcgggacgcagccgcagcgc 233 Query: 379 tggcagcaggtgccgcacgccctcaggcacatcttgggccgccccgacttgctgcaccgg 438 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 234 tggcagcaggtgccgcacgccctcaggcacatcttgggccgccccgacttgctgcaccgg 293 Query: 439 tacgagcagctcgcgccgcagtcgatggcttcagcctgtccatggggagaagtagtggtc 498 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 294 tacgagcagctcgcgccgcagtcgatggcttcagcctgtccatggggagaagtagtggtc 353 Query: 499 tccacgaggagcagcaggacgacgagcgagagcgagaagagcagcctgctgctcgccttg 558 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 354 tccacgaggagcagcaggacgacgagcgagagcgagaagagcagcctgctgctcgccttg 413 Query: 559 gccatggtggaaggttggcttcttgcctgcttaattccttgcacgagagaggccagagat 618 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 414 gccatggtggaaggttggcttcttgcctgcttaattccttgcacgagagaggccagagat 473 Query: 619 cgacacgggccggtggtatggttggttactctactctgccttgcgcgagagagaggtcga 678 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 474 cgacacgggccggtggtatggttggttactctactctgccttgcgcgagagagaggtcga 533 Query: 679 cgcgg 683 ||||| Sbjct: 534 cgcgg 538 Score = 71.9 bits (36), Expect = 1e-10 Identities = 36/36 (100%) Strand = Plus / Plus Query: 146 tgcacgcgcacaatataatgaaccaacaggtagtag 181 |||||||||||||||||||||||||||||||||||| Sbjct: 1 tgcacgcgcacaatataatgaaccaacaggtagtag 36 >gi|12058259|gb|BF728805.2|BF728805 1000067E02.x2 1000 - Unigene I from Maize Genome Project Zea mays cDNA, mRNA sequence Length = 554 Score = 914 bits (461), Expect = 0.0 Identities = 470/473 (99%) Strand = Plus / Plus Query: 199 aagctaggtagtactcctatatatgtaggtgtcatgtctttttggcaaagctgctgatgc 258 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 82 aagctaggtagtactcctatatatgtaggtgtcatgtctttttggcaaagctgctgatgc 141 Query: 259 tgggaaccacggtggatggatcacgggcacttgtgctggccgtcgtgggtcttcatgttg 318 |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 142 tgggaaccacggtggatggatcacgggcacttgttttggccgtcgtgggtcttcatgttg 201 Query: 319 gcgtagcaggggcagacgtcctcgttgccggaggtgcccggcgggacgcagccgcagcgc 378 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 202 gcgtagcaggggcagacgtcctcgttgccggaggtgcccggcgggacgcagccgcagcgc 261 Query: 379 tggcagcaggtgccgcacgccctcaggcacatcttgggccgccccgacttgctgcaccgg 438 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 262 tggcagcaggtgccgcacgccctcaggcacatcttgggccgccccgacttgctgcaccgg 321 Query: 439 tacgagcagctcgcgccgcagtcgatggcttcagcctgtccatggggagaagtagtggtc 498 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 322 tacgagcagctcgcgccgcagtcgatggcttcagcctgtccatggggagaagtaggggtc 381 Query: 499 tccacgaggagcagcaggacgacgagcgagagcgagaagagcagcctgctgctcgccttg 558 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 382 tccacgaggagcagcaggacgacgagcgagagcgagaagagcagcctgctgctcgccttg 441 Query: 559 gccatggtggaaggttggcttcttgcctgcttaattccttgcacgagagaggccagagat 618 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 442 gccatggtggaaggttggcttcttgcctgcttaattccttgcacgagagaggccagagat 501 Query: 619 cgacacgggccggtggtatggttggttactctactctgccttgcgcgagagag 671 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 502 cgacacgggccggtggtatggttggttactctactctgccttgcgcgagagag 554 Score = 127 bits (64), Expect = 2e-27 Identities = 64/64 (100%) Strand = Plus / Plus Query: 118 ataatatgttcatttatttattcatgcatgcacgcgcacaatataatgaaccaacaggta 177 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 ataatatgttcatttatttattcatgcatgcacgcgcacaatataatgaaccaacaggta 60 Query: 178 gtag 181 |||| Sbjct: 61 gtag 64 >gi|71764705|gb|DR962642.1|DR962642 ZM_BFb0081D24.r ZM_BFb Zea mays cDNA 5', mRNA sequence Length = 701 Score = 825 bits (416), Expect = 0.0 Identities = 451/462 (97%), Gaps = 3/462 (0%) Strand = Plus / Minus Query: 216 tatatatgtaggtgtcatgtctttttggcaaagctgctgatgctgggaaccacggtggat 275 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 464 tatatatgtaggtatcatgtctttttggcaaagctgctgatgctgggaaccacggtggat 405 Query: 276 ggatcacgggcacttgtgctggccgtcgtgggtcttcatgttggcgtagcaggggcagac 335 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 404 ggatcacgggcacttgtgctggccgtcgtgggtcttcatgttggcgtagcaggggcagac 345 Query: 336 gtcctcgttgccggaggtgcccggcgggacgcagccgcagcgctggcagcaggtgccgca 395 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 344 gtcctcgttgccggaggtgcccggcgggacgcagccgcagcgctggcagcaggtgccgca 285 Query: 396 cgccctcaggcacatcttgggccgccccgacttgctgcaccggtacgagcagctcgcgcc 455 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 284 cgccctcaggcacatcttgggccgtcccgacttgctgcaccggtacgagcagctcgcgcc 225 Query: 456 gcagtcgatggcttcagcctgtccatggggagaagtagtggtctccacgaggagcagcag 515 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 224 gcagtcgatggcgtcagcctgtccatggggagaagtagtggtctccacgaggagcagcag 165 Query: 516 gacgacgagcgagagcgagaagagcagcctgctgctcgccttggccatggtg---gaagg 572 ||||||||||||||||||||||||||||||||||||||||||||||||| || ||||| Sbjct: 164 gacgacgagcgagagcgagaagagcagcctgctgctcgccttggccatgctggaagaagg 105 Query: 573 ttggcttcttgcctgcttaattccttgcacgagagaggccagagatcgacacgggccggt 632 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104 ttggcctcttgcctgcttaattccttgcacgagagaggccagagatcgacacgggccggt 45 Query: 633 ggtatggttggttactctactctgccttgcgcgagagagagg 674 ||||||||||||| ||||||| || ||||||||||||||||| Sbjct: 44 ggtatggttggttgctctactgtggcttgcgcgagagagagg 3 Score = 111 bits (56), Expect = 1e-22 Identities = 63/64 (98%), Gaps = 1/64 (1%) Strand = Plus / Minus Query: 119 taatatgttcatttatttattcatgcatgcacgcgcacaatataatgaaccaac-aggta 177 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 552 taatatgttcatttatttattcatgcatgcacgcgcacaatataatgaaccaacaaggta 493 Query: 178 gtag 181 |||| Sbjct: 492 gtag 489 >gi|89759674|gb|DY688419.1|DY688419 ZM_BFb0282J19.r ZM_BFb Zea mays cDNA 5', mRNA sequence Length = 775 Score = 825 bits (416), Expect = 0.0 Identities = 451/462 (97%), Gaps = 3/462 (0%) Strand = Plus / Plus Query: 216 tatatatgtaggtgtcatgtctttttggcaaagctgctgatgctgggaaccacggtggat 275 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 246 tatatatgtaggtatcatgtctttttggcaaagctgctgatgctgggaaccacggtggat 305 Query: 276 ggatcacgggcacttgtgctggccgtcgtgggtcttcatgttggcgtagcaggggcagac 335 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 306 ggatcacgggcacttgtgctggccgtcgtgggtcttcatgttggcgtagcaggggcagac 365 Query: 336 gtcctcgttgccggaggtgcccggcgggacgcagccgcagcgctggcagcaggtgccgca 395 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 366 gtcctcgttgccggaggtgcccggcgggacgcagccgcagcgctggcagcaggtgccgca 425 Query: 396 cgccctcaggcacatcttgggccgccccgacttgctgcaccggtacgagcagctcgcgcc 455 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 426 cgccctcaggcacatcttgggccgtcccgacttgctgcaccggtacgagcagctcgcgcc 485 Query: 456 gcagtcgatggcttcagcctgtccatggggagaagtagtggtctccacgaggagcagcag 515 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 486 gcagtcgatggcgtcagcctgtccatggggagaagtagtggtctccacgaggagcagcag 545 Query: 516 gacgacgagcgagagcgagaagagcagcctgctgctcgccttggccatggtg---gaagg 572 ||||||||||||||||||||||||||||||||||||||||||||||||| || ||||| Sbjct: 546 gacgacgagcgagagcgagaagagcagcctgctgctcgccttggccatgctggaagaagg 605 Query: 573 ttggcttcttgcctgcttaattccttgcacgagagaggccagagatcgacacgggccggt 632 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 606 ttggcctcttgcctgcttaattccttgcacgagagaggccagagatcgacacgggccggt 665 Query: 633 ggtatggttggttactctactctgccttgcgcgagagagagg 674 ||||||||||||| ||||||| || ||||||||||||||||| Sbjct: 666 ggtatggttggttgctctactgtggcttgcgcgagagagagg 707 Score = 111 bits (56), Expect = 1e-22 Identities = 63/64 (98%), Gaps = 1/64 (1%) Strand = Plus / Plus Query: 119 taatatgttcatttatttattcatgcatgcacgcgcacaatataatgaaccaac-aggta 177 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 158 taatatgttcatttatttattcatgcatgcacgcgcacaatataatgaaccaacaaggta 217 Query: 178 gtag 181 |||| Sbjct: 218 gtag 221 >gi|21210054|gb|AY106976.1| Zea mays PCO125554 mRNA sequence Length = 752 Score = 825 bits (416), Expect = 0.0 Identities = 451/462 (97%), Gaps = 3/462 (0%) Strand = Plus / Minus Query: 216 tatatatgtaggtgtcatgtctttttggcaaagctgctgatgctgggaaccacggtggat 275 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 466 tatatatgtaggtatcatgtctttttggcaaagctgctgatgctgggaaccacggtggat 407 Query: 276 ggatcacgggcacttgtgctggccgtcgtgggtcttcatgttggcgtagcaggggcagac 335 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 406 ggatcacgggcacttgtgctggccgtcgtgggtcttcatgttggcgtagcaggggcagac 347 Query: 336 gtcctcgttgccggaggtgcccggcgggacgcagccgcagcgctggcagcaggtgccgca 395 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 346 gtcctcgttgccggaggtgcccggcgggacgcagccgcagcgctggcagcaggtgccgca 287 Query: 396 cgccctcaggcacatcttgggccgccccgacttgctgcaccggtacgagcagctcgcgcc 455 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 286 cgccctcaggcacatcttgggccgtcccgacttgctgcaccggtacgagcagctcgcgcc 227 Query: 456 gcagtcgatggcttcagcctgtccatggggagaagtagtggtctccacgaggagcagcag 515 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 226 gcagtcgatggcgtcagcctgtccatggggagaagtagtggtctccacgaggagcagcag 167 Query: 516 gacgacgagcgagagcgagaagagcagcctgctgctcgccttggccatggtg---gaagg 572 ||||||||||||||||||||||||||||||||||||||||||||||||| || ||||| Sbjct: 166 gacgacgagcgagagcgagaagagcagcctgctgctcgccttggccatgctggaagaagg 107 Query: 573 ttggcttcttgcctgcttaattccttgcacgagagaggccagagatcgacacgggccggt 632 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106 ttggcctcttgcctgcttaattccttgcacgagagaggccagagatcgacacgggccggt 47 Query: 633 ggtatggttggttactctactctgccttgcgcgagagagagg 674 ||||||||||||| ||||||| || ||||||||||||||||| Sbjct: 46 ggtatggttggttgctctactgtggcttgcgcgagagagagg 5 Score = 111 bits (56), Expect = 1e-22 Identities = 63/64 (98%), Gaps = 1/64 (1%) Strand = Plus / Minus Query: 119 taatatgttcatttatttattcatgcatgcacgcgcacaatataatgaaccaac-aggta 177 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 554 taatatgttcatttatttattcatgcatgcacgcgcacaatataatgaaccaacaaggta 495 Query: 178 gtag 181 |||| Sbjct: 494 gtag 491 >gi|21210054|gb|AY106976.1| Zea mays PCO125554 mRNA sequence Length = 752 Score = 825 bits (416), Expect = 0.0 Identities = 451/462 (97%), Gaps = 3/462 (0%) Strand = Plus / Minus Query: 216 tatatatgtaggtgtcatgtctttttggcaaagctgctgatgctgggaaccacggtggat 275 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 466 tatatatgtaggtatcatgtctttttggcaaagctgctgatgctgggaaccacggtggat 407 Query: 276 ggatcacgggcacttgtgctggccgtcgtgggtcttcatgttggcgtagcaggggcagac 335 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 406 ggatcacgggcacttgtgctggccgtcgtgggtcttcatgttggcgtagcaggggcagac 347 Query: 336 gtcctcgttgccggaggtgcccggcgggacgcagccgcagcgctggcagcaggtgccgca 395 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 346 gtcctcgttgccggaggtgcccggcgggacgcagccgcagcgctggcagcaggtgccgca 287 Query: 396 cgccctcaggcacatcttgggccgccccgacttgctgcaccggtacgagcagctcgcgcc 455 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 286 cgccctcaggcacatcttgggccgtcccgacttgctgcaccggtacgagcagctcgcgcc 227 Query: 456 gcagtcgatggcttcagcctgtccatggggagaagtagtggtctccacgaggagcagcag 515 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 226 gcagtcgatggcgtcagcctgtccatggggagaagtagtggtctccacgaggagcagcag 167 Query: 516 gacgacgagcgagagcgagaagagcagcctgctgctcgccttggccatggtg---gaagg 572 ||||||||||||||||||||||||||||||||||||||||||||||||| || ||||| Sbjct: 166 gacgacgagcgagagcgagaagagcagcctgctgctcgccttggccatgctggaagaagg 107 Query: 573 ttggcttcttgcctgcttaattccttgcacgagagaggccagagatcgacacgggccggt 632 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106 ttggcctcttgcctgcttaattccttgcacgagagaggccagagatcgacacgggccggt 47 Query: 633 ggtatggttggttactctactctgccttgcgcgagagagagg 674 ||||||||||||| ||||||| || ||||||||||||||||| Sbjct: 46 ggtatggttggttgctctactgtggcttgcgcgagagagagg 5 Score = 111 bits (56), Expect = 1e-22 Identities = 63/64 (98%), Gaps = 1/64 (1%) Strand = Plus / Minus Query: 119 taatatgttcatttatttattcatgcatgcacgcgcacaatataatgaaccaac-aggta 177 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 554 taatatgttcatttatttattcatgcatgcacgcgcacaatataatgaaccaacaaggta 495 Query: 178 gtag 181 |||| Sbjct: 494 gtag 491 >gi|21439755|emb|AX406847.1| Sequence 8 from Patent WO0222821 Length = 720 Score = 825 bits (416), Expect = 0.0 Identities = 451/462 (97%), Gaps = 3/462 (0%) Strand = Plus / Minus Query: 216 tatatatgtaggtgtcatgtctttttggcaaagctgctgatgctgggaaccacggtggat 275 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 466 tatatatgtaggtatcatgtctttttggcaaagctgctgatgctgggaaccacggtggat 407 Query: 276 ggatcacgggcacttgtgctggccgtcgtgggtcttcatgttggcgtagcaggggcagac 335 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 406 ggatcacgggcacttgtgctggccgtcgtgggtcttcatgttggcgtagcaggggcagac 347 Query: 336 gtcctcgttgccggaggtgcccggcgggacgcagccgcagcgctggcagcaggtgccgca 395 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 346 gtcctcgttgccggaggtgcccggcgggacgcagccgcagcgctggcagcaggtgccgca 287 Query: 396 cgccctcaggcacatcttgggccgccccgacttgctgcaccggtacgagcagctcgcgcc 455 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 286 cgccctcaggcacatcttgggccgtcccgacttgctgcaccggtacgagcagctcgcgcc 227 Query: 456 gcagtcgatggcttcagcctgtccatggggagaagtagtggtctccacgaggagcagcag 515 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 226 gcagtcgatggcgtcagcctgtccatggggagaagtagtggtctccacgaggagcagcag 167 Query: 516 gacgacgagcgagagcgagaagagcagcctgctgctcgccttggccatggtg---gaagg 572 ||||||||||||||||||||||||||||||||||||||||||||||||| || ||||| Sbjct: 166 gacgacgagcgagagcgagaagagcagcctgctgctcgccttggccatgctggaagaagg 107 Query: 573 ttggcttcttgcctgcttaattccttgcacgagagaggccagagatcgacacgggccggt 632 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106 ttggcctcttgcctgcttaattccttgcacgagagaggccagagatcgacacgggccggt 47 Query: 633 ggtatggttggttactctactctgccttgcgcgagagagagg 674 ||||||||||||| ||||||| || ||||||||||||||||| Sbjct: 46 ggtatggttggttgctctactgtggcttgcgcgagagagagg 5 Score = 111 bits (56), Expect = 1e-22 Identities = 63/64 (98%), Gaps = 1/64 (1%) Strand = Plus / Minus Query: 119 taatatgttcatttatttattcatgcatgcacgcgcacaatataatgaaccaac-aggta 177 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 554 taatatgttcatttatttattcatgcatgcacgcgcacaatataatgaaccaacaaggta 495 Query: 178 gtag 181 |||| Sbjct: 494 gtag 491 >gi|71764704|gb|DR962641.1|DR962641 ZM_BFb0081D24.f ZM_BFb Zea mays cDNA 3', mRNA sequence Length = 694 Score = 815 bits (411), Expect = 0.0 Identities = 446/457 (97%), Gaps = 3/457 (0%) Strand = Plus / Plus Query: 216 tatatatgtaggtgtcatgtctttttggcaaagctgctgatgctgggaaccacggtggat 275 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 238 tatatatgtaggtatcatgtctttttggcaaagctgctgatgctgggaaccacggtggat 297 Query: 276 ggatcacgggcacttgtgctggccgtcgtgggtcttcatgttggcgtagcaggggcagac 335 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 298 ggatcacgggcacttgtgctggccgtcgtgggtcttcatgttggcgtagcaggggcagac 357 Query: 336 gtcctcgttgccggaggtgcccggcgggacgcagccgcagcgctggcagcaggtgccgca 395 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 358 gtcctcgttgccggaggtgcccggcgggacgcagccgcagcgctggcagcaggtgccgca 417 Query: 396 cgccctcaggcacatcttgggccgccccgacttgctgcaccggtacgagcagctcgcgcc 455 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 418 cgccctcaggcacatcttgggccgtcccgacttgctgcaccggtacgagcagctcgcgcc 477 Query: 456 gcagtcgatggcttcagcctgtccatggggagaagtagtggtctccacgaggagcagcag 515 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 478 gcagtcgatggcgtcagcctgtccatggggagaagtagtggtctccacgaggagcagcag 537 Query: 516 gacgacgagcgagagcgagaagagcagcctgctgctcgccttggccatggtg---gaagg 572 ||||||||||||||||||||||||||||||||||||||||||||||||| || ||||| Sbjct: 538 gacgacgagcgagagcgagaagagcagcctgctgctcgccttggccatgctggaagaagg 597 Query: 573 ttggcttcttgcctgcttaattccttgcacgagagaggccagagatcgacacgggccggt 632 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 598 ttggcctcttgcctgcttaattccttgcacgagagaggccagagatcgacacgggccggt 657 Query: 633 ggtatggttggttactctactctgccttgcgcgagag 669 ||||||||||||| ||||||| || |||||||||||| Sbjct: 658 ggtatggttggttgctctactgtggcttgcgcgagag 694 Score = 111 bits (56), Expect = 1e-22 Identities = 63/64 (98%), Gaps = 1/64 (1%) Strand = Plus / Plus Query: 119 taatatgttcatttatttattcatgcatgcacgcgcacaatataatgaaccaac-aggta 177 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 150 taatatgttcatttatttattcatgcatgcacgcgcacaatataatgaaccaacaaggta 209 Query: 178 gtag 181 |||| Sbjct: 210 gtag 213 >gi|7227526|gb|AW566167.1|AW566167 660062H08.y1 660 - Mixed stages of anther and pollen Zea mays cDNA, mRNA sequence Length = 448 Score = 735 bits (371), Expect = 0.0 Identities = 371/371 (100%) Strand = Plus / Minus Query: 199 aagctaggtagtactcctatatatgtaggtgtcatgtctttttggcaaagctgctgatgc 258 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 380 aagctaggtagtactcctatatatgtaggtgtcatgtctttttggcaaagctgctgatgc 321 Query: 259 tgggaaccacggtggatggatcacgggcacttgtgctggccgtcgtgggtcttcatgttg 318 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 320 tgggaaccacggtggatggatcacgggcacttgtgctggccgtcgtgggtcttcatgttg 261 Query: 319 gcgtagcaggggcagacgtcctcgttgccggaggtgcccggcgggacgcagccgcagcgc 378 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 260 gcgtagcaggggcagacgtcctcgttgccggaggtgcccggcgggacgcagccgcagcgc 201 Query: 379 tggcagcaggtgccgcacgccctcaggcacatcttgggccgccccgacttgctgcaccgg 438 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 200 tggcagcaggtgccgcacgccctcaggcacatcttgggccgccccgacttgctgcaccgg 141 Query: 439 tacgagcagctcgcgccgcagtcgatggcttcagcctgtccatggggagaagtagtggtc 498 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 140 tacgagcagctcgcgccgcagtcgatggcttcagcctgtccatggggagaagtagtggtc 81 Query: 499 tccacgaggagcagcaggacgacgagcgagagcgagaagagcagcctgctgctcgccttg 558 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 80 tccacgaggagcagcaggacgacgagcgagagcgagaagagcagcctgctgctcgccttg 21 Query: 559 gccatggtgga 569 ||||||||||| Sbjct: 20 gccatggtgga 10 Score = 101 bits (51), Expect = 1e-19 Identities = 51/51 (100%) Strand = Plus / Minus Query: 131 ttatttattcatgcatgcacgcgcacaatataatgaaccaacaggtagtag 181 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 448 ttatttattcatgcatgcacgcgcacaatataatgaaccaacaggtagtag 398 >gi|7135510|gb|AW498122.1|AW498122 660042A02.x3 660 - Mixed stages of anther and pollen Zea mays cDNA, mRNA sequence Length = 457 Score = 591 bits (298), Expect = e-167 Identities = 300/301 (99%) Strand = Plus / Plus Query: 199 aagctaggtagtactcctatatatgtaggtgtcatgtctttttggcaaagctgctgatgc 258 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 36 aagctaggtagtactcctatatatgtaggtgtcatgtctttttggcaaagctgctgatgc 95 Query: 259 tgggaaccacggtggatggatcacgggcacttgtgctggccgtcgtgggtcttcatgttg 318 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96 tgggaaccacggnggatggatcacgggcacttgtgctggccgtcgtgggtcttcatgttg 155 Query: 319 gcgtagcaggggcagacgtcctcgttgccggaggtgcccggcgggacgcagccgcagcgc 378 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 156 gcgtagcaggggcagacgtcctcgttgccggaggtgcccggcgggacgcagccgcagcgc 215 Query: 379 tggcagcaggtgccgcacgccctcaggcacatcttgggccgccccgacttgctgcaccgg 438 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 216 tggcagcaggtgccgcacgccctcaggcacatcttgggccgccccgacttgctgcaccgg 275 Query: 439 tacgagcagctcgcgccgcagtcgatggcttcagcctgtccatggggagaagtagtggtc 498 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 276 tacgagcagctcgcgccgcagtcgatggcttcagcctgtccatggggagaagtagtggtc 335 Query: 499 t 499 | Sbjct: 336 t 336 Score = 202 bits (102), Expect = 4e-50 Identities = 107/109 (98%) Strand = Plus / Plus Query: 501 cacgaggagcagcaggacgacgagcgagagcgagaagagcagcctgctgctcgccttggc 560 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 349 cacgaggagcagcaggacgacgagcgagagcgagaagagcagcctgctgctcgccttggc 408 Query: 561 catggtggaaggttggcttcttgcctgcttaattccttgcacgagagag 609 ||||| |||||| |||||||||||||||||||||||||||||||||||| Sbjct: 409 catgggggaaggntggcttcttgcctgcttaattccttgcacgagagag 457 >gi|7135136|gb|AW497934.1|AW497934 660042A02.y1 660 - Mixed stages of anther and pollen Zea mays cDNA, mRNA sequence Length = 550 Score = 583 bits (294), Expect = e-164 Identities = 296/297 (99%) Strand = Plus / Minus Query: 203 taggtagtactcctatatatgtaggtgtcatgtctttttggcaaagctgctgatgctggg 262 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 446 taggtagtnctcctatatatgtaggtgtcatgtctttttggcaaagctgctgatgctggg 387 Query: 263 aaccacggtggatggatcacgggcacttgtgctggccgtcgtgggtcttcatgttggcgt 322 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 386 aaccacggtggatggatcacgggcacttgtgctggccgtcgtgggtcttcatgttggcgt 327 Query: 323 agcaggggcagacgtcctcgttgccggaggtgcccggcgggacgcagccgcagcgctggc 382 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 326 agcaggggcagacgtcctcgttgccggaggtgcccggcgggacgcagccgcagcgctggc 267 Query: 383 agcaggtgccgcacgccctcaggcacatcttgggccgccccgacttgctgcaccggtacg 442 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 266 agcaggtgccgcacgccctcaggcacatcttgggccgccccgacttgctgcaccggtacg 207 Query: 443 agcagctcgcgccgcagtcgatggcttcagcctgtccatggggagaagtagtggtct 499 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 206 agcagctcgcgccgcagtcgatggcttcagcctgtccatggggagaagtagtggtct 150 Score = 272 bits (137), Expect = 5e-71 Identities = 137/137 (100%) Strand = Plus / Minus Query: 501 cacgaggagcagcaggacgacgagcgagagcgagaagagcagcctgctgctcgccttggc 560 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 137 cacgaggagcagcaggacgacgagcgagagcgagaagagcagcctgctgctcgccttggc 78 Query: 561 catggtggaaggttggcttcttgcctgcttaattccttgcacgagagaggccagagatcg 620 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 77 catggtggaaggttggcttcttgcctgcttaattccttgcacgagagaggccagagatcg 18 Query: 621 acacgggccggtggtat 637 ||||||||||||||||| Sbjct: 17 acacgggccggtggtat 1 Score = 103 bits (52), Expect = 3e-20 Identities = 64/68 (94%) Strand = Plus / Minus Query: 114 ttatataatatgttcatttatttattcatgcatgcacgcgcacaatataatgaaccaaca 173 ||||||||||||||| || |||||||||||||||||||||| ||||||||||||||| || Sbjct: 535 ttatataatatgttctttaatttattcatgcatgcacgcgcccaatataatgaaccacca 476 Query: 174 ggtagtag 181 |||||||| Sbjct: 475 ggtagtag 468 >gi|8930097|gb|BE224935.1|BE224935 946016D10.x1 946 - tassel primordium prepared by Schmidt lab Zea mays cDNA, mRNA sequence Length = 404 Score = 424 bits (214), Expect = e-117 Identities = 214/214 (100%) Strand = Plus / Plus Query: 334 acgtcctcgttgccggaggtgcccggcgggacgcagccgcagcgctggcagcaggtgccg 393 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 182 acgtcctcgttgccggaggtgcccggcgggacgcagccgcagcgctggcagcaggtgccg 241 Query: 394 cacgccctcaggcacatcttgggccgccccgacttgctgcaccggtacgagcagctcgcg 453 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 242 cacgccctcaggcacatcttgggccgccccgacttgctgcaccggtacgagcagctcgcg 301 Query: 454 ccgcagtcgatggcttcagcctgtccatggggagaagtagtggtctccacgaggagcagc 513 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 302 ccgcagtcgatggcttcagcctgtccatggggagaagtagtggtctccacgaggagcagc 361 Query: 514 aggacgacgagcgagagcgagaagagcagcctgc 547 |||||||||||||||||||||||||||||||||| Sbjct: 362 aggacgacgagcgagagcgagaagagcagcctgc 395 Score = 246 bits (124), Expect = 3e-63 Identities = 124/124 (100%) Strand = Plus / Plus Query: 199 aagctaggtagtactcctatatatgtaggtgtcatgtctttttggcaaagctgctgatgc 258 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47 aagctaggtagtactcctatatatgtaggtgtcatgtctttttggcaaagctgctgatgc 106 Query: 259 tgggaaccacggtggatggatcacgggcacttgtgctggccgtcgtgggtcttcatgttg 318 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107 tgggaaccacggtggatggatcacgggcacttgtgctggccgtcgtgggtcttcatgttg 166 Query: 319 gcgt 322 |||| Sbjct: 167 gcgt 170 Score = 58.0 bits (29), Expect = 2e-06 Identities = 29/29 (100%) Strand = Plus / Plus Query: 153 gcacaatataatgaaccaacaggtagtag 181 ||||||||||||||||||||||||||||| Sbjct: 1 gcacaatataatgaaccaacaggtagtag 29 >gi|76589478|gb|DQ207707.1| Zea mays cultivar inbred line Mo17 IDP449 marker Length = 508 Score = 285 bits (144), Expect = 4e-75 Identities = 144/144 (100%) Strand = Plus / Plus Query: 318 ggcgtagcaggggcagacgtcctcgttgccggaggtgcccggcgggacgcagccgcagcg 377 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 ggcgtagcaggggcagacgtcctcgttgccggaggtgcccggcgggacgcagccgcagcg 60 Query: 378 ctggcagcaggtgccgcacgccctcaggcacatcttgggccgccccgacttgctgcaccg 437 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 ctggcagcaggtgccgcacgccctcaggcacatcttgggccgccccgacttgctgcaccg 120 Query: 438 gtacgagcagctcgcgccgcagtc 461 |||||||||||||||||||||||| Sbjct: 121 gtacgagcagctcgcgccgcagtc 144 Score = 182 bits (92), Expect = 4e-44 Identities = 92/92 (100%) Strand = Plus / Plus Query: 498 ctccacgaggagcagcaggacgacgagcgagagcgagaagagcagcctgctgctcgcctt 557 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 417 ctccacgaggagcagcaggacgacgagcgagagcgagaagagcagcctgctgctcgcctt 476 Query: 558 ggccatggtggaaggttggcttcttgcctgct 589 |||||||||||||||||||||||||||||||| Sbjct: 477 ggccatggtggaaggttggcttcttgcctgct 508 Score = 77.8 bits (39), Expect = 2e-12 Identities = 39/39 (100%) Strand = Plus / Plus Query: 461 cgatggcttcagcctgtccatggggagaagtagtggtct 499 ||||||||||||||||||||||||||||||||||||||| Sbjct: 216 cgatggcttcagcctgtccatggggagaagtagtggtct 254 >gi|76589477|gb|DQ207706.1| Zea mays cultivar B73 IDP449 marker Length = 569 Score = 276 bits (139), Expect = 3e-72 Identities = 142/143 (99%) Strand = Plus / Minus Query: 319 gcgtagcaggggcagacgtcctcgttgccggaggtgcccggcgggacgcagccgcagcgc 378 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 567 gcgtagcaggggcagacgtcctcgttgccggaggtgcccggcgggacgcagccgcagcgc 508 Query: 379 tggcagcaggtgccgcacgccctcaggcacatcttgggccgccccgacttgctgcaccgg 438 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 507 tggcagcaggtgccgcacgccctcaggcacatcttgggccgtcccgacttgctgcaccgg 448 Query: 439 tacgagcagctcgcgccgcagtc 461 ||||||||||||||||||||||| Sbjct: 447 tacgagcagctcgcgccgcagtc 425 Score = 149 bits (75), Expect = 5e-34 Identities = 92/97 (94%), Gaps = 3/97 (3%) Strand = Plus / Minus Query: 498 ctccacgaggagcagcaggacgacgagcgagagcgagaagagcagcctgctgctcgcctt 557 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100 ctccacgaggagcagcaggacgacgagcgagagcgagaagagcagcctgctgctcgcctt 41 Query: 558 ggccatggtg---gaaggttggcttcttgcctgctta 591 ||||||| || |||||||||| ||||||||||||| Sbjct: 40 ggccatgctggaagaaggttggcctcttgcctgctta 4 Score = 69.9 bits (35), Expect = 4e-10 Identities = 38/39 (97%) Strand = Plus / Minus Query: 461 cgatggcttcagcctgtccatggggagaagtagtggtct 499 ||||||| ||||||||||||||||||||||||||||||| Sbjct: 318 cgatggcgtcagcctgtccatggggagaagtagtggtct 280 >gi|12970314|gb|BG266921.1|BG266921 1000108G06.x2 1000 - Unigene I from Maize Genome Project Zea mays cDNA, mRNA sequence Length = 320 Score = 79.8 bits (40), Expect = 4e-13 Identities = 79/92 (85%) Strand = Plus / Plus Query: 318 ggcgtagcaggggcagacgtcctcgttgccggaggtgcccggcgggacgcagccgcagcg 377 ||||||||||||||||||||| | ||| |||| |||||||||||| |||||| |||||| Sbjct: 30 ggcgtagcaggggcagacgtcgtggttcccggcggtgcccggcggcacgcagttgcagcg 89 Query: 378 ctggcagcaggtgccgcacgccctcaggcaca 409 |||||||| |||||||||||| |||||| Sbjct: 90 ggcgcagcaggacccgcacgccctcgggcaca 121 >gi|31358832|gb|CD443189.1|CD443189 EL01N0423B05.b Endosperm_4 Zea mays cDNA, mRNA sequence Length = 517 Score = 79.8 bits (40), Expect = 4e-13 Identities = 79/92 (85%) Strand = Plus / Minus Query: 318 ggcgtagcaggggcagacgtcctcgttgccggaggtgcccggcgggacgcagccgcagcg 377 ||||||||||||||||||||| | ||| |||| |||||||||||| |||||| |||||| Sbjct: 426 ggcgtagcaggggcagacgtcgtggttcccggcggtgcccggcggcacgcagttgcagcg 367 Query: 378 ctggcagcaggtgccgcacgccctcaggcaca 409 |||||||| |||||||||||| |||||| Sbjct: 366 ggcgcagcaggacccgcacgccctccggcaca 335 >gi|67010674|gb|CO439423.1|CO439423 MZCCL10006E06.g Maize Endosperm cDNA Library Zea mays cDNA, mRNA sequence Length = 614 Score = 79.8 bits (40), Expect = 4e-13 Identities = 79/92 (85%) Strand = Plus / Minus Query: 318 ggcgtagcaggggcagacgtcctcgttgccggaggtgcccggcgggacgcagccgcagcg 377 ||||||||||||||||||||| | ||| |||| |||||||||||| |||||| |||||| Sbjct: 409 ggcgtagcaggggcagacgtcgtggttcccggcggtgcccggcggcacgcagttgcagcg 350 Query: 378 ctggcagcaggtgccgcacgccctcaggcaca 409 |||||||| |||||||||||| |||||| Sbjct: 349 ggcgcagcaggacccgcacgccctccggcaca 318 >gi|67019177|gb|CO447926.1|CO447926 MZCCL10117C05.g Maize Endosperm cDNA Library Zea mays cDNA, mRNA sequence Length = 697 Score = 79.8 bits (40), Expect = 4e-13 Identities = 79/92 (85%) Strand = Plus / Minus Query: 318 ggcgtagcaggggcagacgtcctcgttgccggaggtgcccggcgggacgcagccgcagcg 377 ||||||||||||||||||||| | ||| |||| |||||||||||| |||||| |||||| Sbjct: 454 ggcgtagcaggggcagacgtcgtggttcccggcggtgcccggcggcacgcagttgcagcg 395 Query: 378 ctggcagcaggtgccgcacgccctcaggcaca 409 |||||||| |||||||||||| |||||| Sbjct: 394 ggcgcagcaggacccgcacgccctccggcaca 363 >gi|67025695|gb|CO454444.1|CO454444 MZCCL10204B03.g Maize Endosperm cDNA Library Zea mays cDNA, mRNA sequence Length = 711 Score = 79.8 bits (40), Expect = 4e-13 Identities = 79/92 (85%) Strand = Plus / Minus Query: 318 ggcgtagcaggggcagacgtcctcgttgccggaggtgcccggcgggacgcagccgcagcg 377 ||||||||||||||||||||| | ||| |||| |||||||||||| |||||| |||||| Sbjct: 378 ggcgtagcaggggcagacgtcgtggttcccggcggtgcccggcggcacgcagttgcagcg 319 Query: 378 ctggcagcaggtgccgcacgccctcaggcaca 409 |||||||| |||||||||||| |||||| Sbjct: 318 ggcgcagcaggacccgcacgccctccggcaca 287 >gi|67039592|gb|CO465847.1|CO465847 MZCCL20039C02.g Maize Endosperm cDNA Library Zea mays cDNA, mRNA sequence Length = 776 Score = 79.8 bits (40), Expect = 4e-13 Identities = 79/92 (85%) Strand = Plus / Minus Query: 318 ggcgtagcaggggcagacgtcctcgttgccggaggtgcccggcgggacgcagccgcagcg 377 ||||||||||||||||||||| | ||| |||| |||||||||||| |||||| |||||| Sbjct: 405 ggcgtagcaggggcagacgtcgtggttcccggcggtgcccggcggcacgcagttgcagcg 346 Query: 378 ctggcagcaggtgccgcacgccctcaggcaca 409 |||||||| |||||||||||| |||||| Sbjct: 345 ggcgcagcaggacccgcacgccctccggcaca 314 >gi|54652328|gb|BT017547.1| Zea mays clone EL01N0423B05.c mRNA sequence Length = 680 Score = 79.8 bits (40), Expect = 4e-13 Identities = 79/92 (85%) Strand = Plus / Minus Query: 318 ggcgtagcaggggcagacgtcctcgttgccggaggtgcccggcgggacgcagccgcagcg 377 ||||||||||||||||||||| | ||| |||| |||||||||||| |||||| |||||| Sbjct: 426 ggcgtagcaggggcagacgtcgtggttcccggcggtgcccggcggcacgcagttgcagcg 367 Query: 378 ctggcagcaggtgccgcacgccctcaggcaca 409 |||||||| |||||||||||| |||||| Sbjct: 366 ggcgcagcaggacccgcacgccctccggcaca 335 >gi|54652328|gb|BT017547.1| Zea mays clone EL01N0423B05.c mRNA sequence Length = 680 Score = 79.8 bits (40), Expect = 4e-13 Identities = 79/92 (85%) Strand = Plus / Minus Query: 318 ggcgtagcaggggcagacgtcctcgttgccggaggtgcccggcgggacgcagccgcagcg 377 ||||||||||||||||||||| | ||| |||| |||||||||||| |||||| |||||| Sbjct: 426 ggcgtagcaggggcagacgtcgtggttcccggcggtgcccggcggcacgcagttgcagcg 367 Query: 378 ctggcagcaggtgccgcacgccctcaggcaca 409 |||||||| |||||||||||| |||||| Sbjct: 366 ggcgcagcaggacccgcacgccctccggcaca 335 >gi|58082299|gb|AC155437.2| Zea mays strain B73 clone ZMMBBb0265G21, *** SEQUENCING IN PROGRESS ***, 17 unordered pieces Length = 183427 Score = 79.8 bits (40), Expect = 4e-13 Identities = 79/92 (85%) Strand = Plus / Minus Query: 318 ggcgtagcaggggcagacgtcctcgttgccggaggtgcccggcgggacgcagccgcagcg 377 ||||||||||||||||||||| | ||| |||| |||||||||||| |||||| |||||| Sbjct: 33968 ggcgtagcaggggcagacgtcgtggttcccggcggtgcccggcggcacgcagttgcagcg 33909 Query: 378 ctggcagcaggtgccgcacgccctcaggcaca 409 |||||||| |||||||||||| |||||| Sbjct: 33908 ggcgcagcaggacccgcacgccctccggcaca 33877 >gi|24766455|gb|CA401609.1|CA401609 EL01N0423B05.g Endosperm_4 Zea mays cDNA, mRNA sequence Length = 523 Score = 65.9 bits (33), Expect = 6e-09 Identities = 72/85 (84%) Strand = Plus / Plus Query: 318 ggcgtagcaggggcagacgtcctcgttgccggaggtgcccggcgggacgcagccgcagcg 377 |||||| |||||||||||||| | ||| |||| |||||||||||| |||||| |||||| Sbjct: 255 ggcgtaacaggggcagacgtcgtggttcccggcggtgcccggcggcacgcagttgcagcg 314 Query: 378 ctggcagcaggtgccgcacgccctc 402 |||||||| |||||||||||| Sbjct: 315 ggcgcagcaggacccgcacgccctc 339 >gi|5525234|gb|AI861232.1|AI861232 603011F05.x1 603 - stressed root cDNA library from Wang/Bohnert lab Zea mays cDNA, mRNA sequence Length = 652 Score = 48.1 bits (24), Expect = 0.001 Identities = 42/48 (87%) Strand = Plus / Minus Query: 321 gtagcaggggcagacgtcctcgttgccggaggtgcccggcgggacgca 368 ||||||||||||| || || ||||||| ||||||||||||| ||||| Sbjct: 569 gtagcaggggcaggtgttcttgttgccgtaggtgcccggcggcacgca 522 >gi|5761820|gb|AI966973.1|AI966973 496016B09.x1 496 - stressed shoot cDNA library from Wang/Bohnert lab Zea mays cDNA, mRNA sequence Length = 547 Score = 48.1 bits (24), Expect = 0.001 Identities = 42/48 (87%) Strand = Plus / Plus Query: 321 gtagcaggggcagacgtcctcgttgccggaggtgcccggcgggacgca 368 ||||||||||||| || || ||||||| ||||||||||||| ||||| Sbjct: 127 gtagcaggggcaggtgttcttgttgccgtaggtgcccggcggcacgca 174 >gi|6195010|gb|AW147114.1|AW147114 707013D08.x1 707 - Mixed adult tissues from Walbot lab (SK) Zea mays cDNA, mRNA sequence Length = 182 Score = 48.1 bits (24), Expect = 0.001 Identities = 42/48 (87%) Strand = Plus / Minus Query: 321 gtagcaggggcagacgtcctcgttgccggaggtgcccggcgggacgca 368 ||||||||||||| || || ||||||| ||||||||||||| ||||| Sbjct: 62 gtagcaggggcaggtgttcttgttgccgtaggtgcccggcggcacgca 15 >gi|6195043|gb|AW147147.1|AW147147 707013D08.y6 707 - Mixed adult tissues from Walbot lab (SK) Zea mays cDNA, mRNA sequence Length = 450 Score = 48.1 bits (24), Expect = 0.001 Identities = 42/48 (87%) Strand = Plus / Plus Query: 321 gtagcaggggcagacgtcctcgttgccggaggtgcccggcgggacgca 368 ||||||||||||| || || ||||||| ||||||||||||| ||||| Sbjct: 172 gtagcaggggcaggtgttcttgttgccgtaggtgcccggcggcacgca 219 >gi|6827800|gb|AW331443.1|AW331443 707013D08.y4 707 - Mixed adult tissues from Walbot lab (SK) Zea mays cDNA, mRNA sequence Length = 326 Score = 48.1 bits (24), Expect = 0.001 Identities = 42/48 (87%) Strand = Plus / Plus Query: 321 gtagcaggggcagacgtcctcgttgccggaggtgcccggcgggacgca 368 ||||||||||||| ||| || ||||||| |||||||||| || ||||| Sbjct: 171 gtagcaggggcaggcgttcttgttgccgtaggtgcccggaggcacgca 218 >gi|9953529|gb|BE640112.1|BE640112 946046E12.y1 946 - tassel primordium prepared by Schmidt lab Zea mays cDNA, mRNA sequence Length = 618 Score = 48.1 bits (24), Expect = 0.001 Identities = 42/48 (87%) Strand = Plus / Minus Query: 321 gtagcaggggcagacgtcctcgttgccggaggtgcccggcgggacgca 368 ||||||||||||| || || ||||||| ||||||||||||| ||||| Sbjct: 478 gtagcaggggcaggtgttcttgttgccgtaggtgcccggcggcacgca 431 >gi|14244374|gb|BG842418.2|BG842418 MEST30-F07.T3 ISUM4-TN Zea mays cDNA clone MEST30-F07 3', mRNA sequence Length = 558 Score = 48.1 bits (24), Expect = 0.001 Identities = 42/48 (87%) Strand = Plus / Plus Query: 321 gtagcaggggcagacgtcctcgttgccggaggtgcccggcgggacgca 368 ||||||||||||| || || ||||||| ||||||||||||| ||||| Sbjct: 177 gtagcaggggcaggtgttcttgttgccgtaggtgcccggcggcacgca 224 >gi|28986926|gb|CB351377.1|CB351377 3529_1_22_1_B10.x_4 3529 - 2 mm ear tissue from Schmidt and Hake labs Zea mays cDNA, mRNA sequence Length = 592 Score = 48.1 bits (24), Expect = 0.001 Identities = 42/48 (87%) Strand = Plus / Plus Query: 321 gtagcaggggcagacgtcctcgttgccggaggtgcccggcgggacgca 368 ||||||||||||| || || ||||||| ||||||||||||| ||||| Sbjct: 121 gtagcaggggcaggtgttcttgttgccgtaggtgcccggcggcacgca 168 >gi|29129744|gb|CB380448.1|CB380448 3529_1_22_1_B10.y_2 3529 - 2 mm ear tissue from Schmidt and Hake labs Zea mays cDNA, mRNA sequence Length = 544 Score = 48.1 bits (24), Expect = 0.001 Identities = 42/48 (87%) Strand = Plus / Minus Query: 321 gtagcaggggcagacgtcctcgttgccggaggtgcccggcgggacgca 368 ||||||||||||| || || ||||||| ||||||||||||| ||||| Sbjct: 510 gtagcaggggcaggtgttcttgttgccgtaggtgcccggcggcacgca 463 >gi|50335001|gb|CO530127.1|CO530127 3530_1_199_1_E02.x_1 3530 - Full length cDNA library created by Invitrogen from multiple tissues Zea mays cDNA, mRNA sequence Length = 649 Score = 48.1 bits (24), Expect = 0.001 Identities = 42/48 (87%) Strand = Plus / Plus Query: 321 gtagcaggggcagacgtcctcgttgccggaggtgcccggcgggacgca 368 ||||||||||||| || || ||||||| ||||||||||||| ||||| Sbjct: 237 gtagcaggggcaggtgttcttgttgccgtaggtgcccggcggcacgca 284 >gi|50335002|gb|CO530128.1|CO530128 3530_1_199_1_E02.y_1 3530 - Full length cDNA library created by Invitrogen from multiple tissues Zea mays cDNA, mRNA sequence Length = 632 Score = 48.1 bits (24), Expect = 0.001 Identities = 42/48 (87%) Strand = Plus / Minus Query: 321 gtagcaggggcagacgtcctcgttgccggaggtgcccggcgggacgca 368 ||||||||||||| || || ||||||| ||||||||||||| ||||| Sbjct: 428 gtagcaggggcaggtgttcttgttgccgtaggtgcccggcggcacgca 381 >gi|60350418|gb|DN217391.1|DN217391 MEST1050_E07.T7-1 UGA-ZmSAM-XZ2 Zea mays cDNA, mRNA sequence Length = 612 Score = 48.1 bits (24), Expect = 0.001 Identities = 42/48 (87%) Strand = Plus / Plus Query: 321 gtagcaggggcagacgtcctcgttgccggaggtgcccggcgggacgca 368 ||||||||||||| || || ||||||| ||||||||||||| ||||| Sbjct: 264 gtagcaggggcaggtgttcttgttgccgtaggtgcccggcggcacgca 311 >gi|71447667|gb|DR828717.1|DR828717 ZM_BFb0073P07.r ZM_BFb Zea mays cDNA 5', mRNA sequence Length = 803 Score = 48.1 bits (24), Expect = 0.001 Identities = 42/48 (87%) Strand = Plus / Minus Query: 321 gtagcaggggcagacgtcctcgttgccggaggtgcccggcgggacgca 368 ||||||||||||| || || ||||||| ||||||||||||| ||||| Sbjct: 721 gtagcaggggcaggtgttcttgttgccgtaggtgcccggcggcacgca 674 >gi|78114096|gb|DV532485.1|DV532485 ZM_BFb0223D02.f ZM_BFb Zea mays cDNA 3', mRNA sequence Length = 648 Score = 48.1 bits (24), Expect = 0.001 Identities = 42/48 (87%) Strand = Plus / Plus Query: 321 gtagcaggggcagacgtcctcgttgccggaggtgcccggcgggacgca 368 ||||||||||||| || || ||||||| ||||||||||||| ||||| Sbjct: 208 gtagcaggggcaggtgttcttgttgccgtaggtgcccggcggcacgca 255 >gi|78114097|gb|DV532486.1|DV532486 ZM_BFb0223D02.r ZM_BFb Zea mays cDNA 5', mRNA sequence Length = 648 Score = 48.1 bits (24), Expect = 0.001 Identities = 42/48 (87%) Strand = Plus / Minus Query: 321 gtagcaggggcagacgtcctcgttgccggaggtgcccggcgggacgca 368 ||||||||||||| || || ||||||| ||||||||||||| ||||| Sbjct: 441 gtagcaggggcaggtgttcttgttgccgtaggtgcccggcggcacgca 394 >gi|85152517|gb|DW587761.1|DW587761 E3484 Zea mays egg cell cDNA library Zea mays cDNA clone 5706 5' similar to GASA-like protein, mRNA sequence Length = 568 Score = 48.1 bits (24), Expect = 0.001 Identities = 42/48 (87%) Strand = Plus / Minus Query: 321 gtagcaggggcagacgtcctcgttgccggaggtgcccggcgggacgca 368 ||||||||||||| |||| ||||||| ||||||||||||| ||||| Sbjct: 359 gtagcaggggcaggtctccttgttgccgtaggtgcccggcggcacgca 312 >gi|89251552|gb|DY623338.1|DY623338 ZM_BFb0294D10.f ZM_BFb Zea mays cDNA 3', mRNA sequence Length = 607 Score = 48.1 bits (24), Expect = 0.001 Identities = 42/48 (87%) Strand = Plus / Plus Query: 321 gtagcaggggcagacgtcctcgttgccggaggtgcccggcgggacgca 368 ||||||||||||| || || ||||||| ||||||||||||| ||||| Sbjct: 152 gtagcaggggcaggtgttcttgttgccgtaggtgcccggcggcacgca 199 >gi|21210817|gb|AY107739.1| Zea mays PCO089350 mRNA sequence Length = 645 Score = 48.1 bits (24), Expect = 0.001 Identities = 42/48 (87%) Strand = Plus / Minus Query: 321 gtagcaggggcagacgtcctcgttgccggaggtgcccggcgggacgca 368 ||||||||||||| || || ||||||| ||||||||||||| ||||| Sbjct: 442 gtagcaggggcaggtgttcttgttgccgtaggtgcccggcggcacgca 395 >gi|21210817|gb|AY107739.1| Zea mays PCO089350 mRNA sequence Length = 645 Score = 48.1 bits (24), Expect = 0.001 Identities = 42/48 (87%) Strand = Plus / Minus Query: 321 gtagcaggggcagacgtcctcgttgccggaggtgcccggcgggacgca 368 ||||||||||||| || || ||||||| ||||||||||||| ||||| Sbjct: 442 gtagcaggggcaggtgttcttgttgccgtaggtgcccggcggcacgca 395 >gi|21439757|emb|AX406848.1| Sequence 9 from Patent WO0222821 Length = 754 Score = 48.1 bits (24), Expect = 0.001 Identities = 42/48 (87%) Strand = Plus / Minus Query: 321 gtagcaggggcagacgtcctcgttgccggaggtgcccggcgggacgca 368 ||||||||||||| || || ||||||| ||||||||||||| ||||| Sbjct: 497 gtagcaggggcaggtgttcttgttgccgtaggtgcccggcggcacgca 450 >gi|18173504|gb|BM348892.1|BM348892 MEST303-C12.T3 ISUM5-RN Zea mays cDNA clone MEST303-C12 3', mRNA sequence Length = 672 Score = 40.1 bits (20), Expect = 0.36 Identities = 41/48 (85%) Strand = Plus / Plus Query: 321 gtagcaggggcagacgtcctcgttgccggaggtgcccggcgggacgca 368 ||||||||||||| || || ||||||| | ||||||||||| ||||| Sbjct: 167 gtagcaggggcaggtgttcttgttgccgtatgtgcccggcggcacgca 214 >gi|28931035|gb|CB334396.1|CB334396 3529_1_22_1_B10.x_2 3529 - 2 mm ear tissue from Schmidt and Hake labs Zea mays cDNA, mRNA sequence Length = 175 Score = 40.1 bits (20), Expect = 0.36 Identities = 41/48 (85%) Strand = Plus / Plus Query: 321 gtagcaggggcagacgtcctcgttgccggaggtgcccggcgggacgca 368 ||||||||||||| || || ||||||| |||||||||| || ||||| Sbjct: 111 gtagcaggggcaggtgttcttgttgccgtaggtgcccgggggcacgca 158 >gi|78022838|gb|DV491225.1|DV491225 1000125-H09.T7-1 UGI-Reseq Zea mays cDNA, mRNA sequence Length = 607 Score = 40.1 bits (20), Expect = 0.36 Identities = 41/48 (85%) Strand = Plus / Minus Query: 321 gtagcaggggcagacgtcctcgttgccggaggtgcccggcgggacgca 368 ||||||||||||| || || ||||| | ||||||||||||| ||||| Sbjct: 570 gtagcaggggcaggtgttcttgttgctgtaggtgcccggcggcacgca 523 >gi|984426|gb|G10793.1|G10793 php20075 F maize DGrant5 Zea mays STS genomic clone php20075, sequence tagged site Length = 304 Score = 40.1 bits (20), Expect = 0.36 Identities = 41/48 (85%) Strand = Plus / Minus Query: 321 gtagcaggggcagacgtcctcgttgccggaggtgcccggcgggacgca 368 ||||||||||||| |||| ||||||| ||||||| ||||| ||||| Sbjct: 146 gtagcaggggcaggtctccttgttgccgtaggtgccaggcggcacgca 99 >gi|66803566|gb|DQ059321.1| Zea mays RFLP core bin marker probe p-php20075 (CBM10.01), complete sequence Length = 1311 Score = 40.1 bits (20), Expect = 0.36 Identities = 41/48 (85%) Strand = Plus / Minus Query: 321 gtagcaggggcagacgtcctcgttgccggaggtgcccggcgggacgca 368 ||||||||||||| |||| ||||||| ||||||| ||||| ||||| Sbjct: 146 gtagcaggggcaggtctccttgttgccgtaggtgccaggcggcacgca 99 >gi|21439753|emb|AX406846.1| Sequence 7 from Patent WO0222821 Length = 806 Score = 40.1 bits (20), Expect = 0.36 Identities = 41/48 (85%) Strand = Plus / Minus Query: 321 gtagcaggggcagacgtcctcgttgccggaggtgcccggcgggacgca 368 ||||||||||||| |||| ||||||| ||||||| ||||| ||||| Sbjct: 483 gtagcaggggcaggtctccttgttgccgtaggtgccaggcggcacgca 436 >gi|92899646|gb|AC185417.1| Zea mays chromosome UNK clone CH201-530D19; ZMMBBc0530D19, *** SEQUENCING IN PROGRESS ***, 22 unordered pieces Length = 198209 Score = 40.1 bits (20), Expect = 0.36 Identities = 20/20 (100%) Strand = Plus / Minus Query: 387 ggtgccgcacgccctcaggc 406 |||||||||||||||||||| Sbjct: 171788 ggtgccgcacgccctcaggc 171769 >gi|85861444|gb|AC177934.1| Zea mays chromosome UNK clone CH201-116E17; ZMMBBc0116E17, *** SEQUENCING IN PROGRESS ***, 8 unordered pieces Length = 177641 Score = 40.1 bits (20), Expect = 0.36 Identities = 20/20 (100%) Strand = Plus / Minus Query: 120 aatatgttcatttatttatt 139 |||||||||||||||||||| Sbjct: 60366 aatatgttcatttatttatt 60347 >gi|58082274|gb|AC155412.2| Zea mays strain B73 clone ZMMBBb0191E02, *** SEQUENCING IN PROGRESS ***, 20 unordered pieces Length = 160813 Score = 40.1 bits (20), Expect = 0.36 Identities = 41/48 (85%) Strand = Plus / Minus Query: 321 gtagcaggggcagacgtcctcgttgccggaggtgcccggcgggacgca 368 ||||||||||||| |||| ||||||| ||||||| ||||| ||||| Sbjct: 84279 gtagcaggggcaggtctccttgttgccgtaggtgccaggcggcacgca 84232 >gi|7145272|gb|AW506753.1|AW506753 660059F11.x1 660 - Mixed stages of anther and pollen Zea mays cDNA, mRNA sequence Length = 529 Score = 38.2 bits (19), Expect = 1.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 102 acatatatactattatata 120 ||||||||||||||||||| Sbjct: 27 acatatatactattatata 45 >gi|14585582|gb|BI135334.1|BI135334 949036C01.x2 949 - Juvenile leaf and shoot cDNA from Steve Moose Zea mays cDNA, mRNA sequence Length = 514 Score = 38.2 bits (19), Expect = 1.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 31 gcttcaagttaccatgcat 49 ||||||||||||||||||| Sbjct: 35 gcttcaagttaccatgcat 53 >gi|30160690|gb|CB924419.1|CB924419 EST1512 Zea mays sperm cell cDNA library Zea mays cDNA clone Zmsp5364 5', mRNA sequence Length = 437 Score = 38.2 bits (19), Expect = 1.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 31 gcttcaagttaccatgcat 49 ||||||||||||||||||| Sbjct: 387 gcttcaagttaccatgcat 369 >gi|60348311|gb|DN215284.1|DN215284 MEST913_C11.T7-1 UGA-ZmSAM-XZ2 Zea mays cDNA, mRNA sequence Length = 710 Score = 38.2 bits (19), Expect = 1.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 108 atactattatataatatgt 126 ||||||||||||||||||| Sbjct: 33 atactattatataatatgt 51 >gi|71316970|gb|DR795168.1|DR795168 ZM_BFb0016D06.f ZM_BFb Zea mays cDNA 3', mRNA sequence Length = 605 Score = 38.2 bits (19), Expect = 1.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 31 gcttcaagttaccatgcat 49 ||||||||||||||||||| Sbjct: 48 gcttcaagttaccatgcat 66 >gi|76016769|gb|DT943939.1|DT943939 ZM_BFb0130C24.f ZM_BFb Zea mays cDNA 3', mRNA sequence Length = 690 Score = 38.2 bits (19), Expect = 1.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 31 gcttcaagttaccatgcat 49 ||||||||||||||||||| Sbjct: 21 gcttcaagttaccatgcat 39 >gi|21210822|gb|AY107744.1| Zea mays PCO069826 mRNA sequence Length = 706 Score = 38.2 bits (19), Expect = 1.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 31 gcttcaagttaccatgcat 49 ||||||||||||||||||| Sbjct: 586 gcttcaagttaccatgcat 568 >gi|45665157|gb|BV125634.1| PZA00102 Zea mays ssp. parviglumis Beadle & Kato site 4 Zea mays Beadle & Kato site 4 Zea mays subsp. parviglumis STS genomic, sequence tagged site Length = 470 Score = 38.2 bits (19), Expect = 1.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 134 tttattcatgcatgcacgc 152 ||||||||||||||||||| Sbjct: 323 tttattcatgcatgcacgc 341 >gi|45665152|gb|BV125629.1| PZA00102 Zea mays ssp. parviglumis CIMMYT 11355 Zea mays CIMMYT 11355 Zea mays subsp. parviglumis STS genomic, sequence tagged site Length = 471 Score = 38.2 bits (19), Expect = 1.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 134 tttattcatgcatgcacgc 152 ||||||||||||||||||| Sbjct: 324 tttattcatgcatgcacgc 342 >gi|45665148|gb|BV125625.1| PZA00102 Zea mays ssp. parviglumis JSGyLOS 109 Zea mays JSGyLOS 109 Zea mays subsp. parviglumis STS genomic, sequence tagged site Length = 471 Score = 38.2 bits (19), Expect = 1.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 134 tttattcatgcatgcacgc 152 ||||||||||||||||||| Sbjct: 324 tttattcatgcatgcacgc 342 >gi|45665145|gb|BV125622.1| PZA00102 Zea mays ssp. parviglumis JSGyMAS 401 Zea mays JSGyMAS 401 Zea mays subsp. parviglumis STS genomic, sequence tagged site Length = 449 Score = 38.2 bits (19), Expect = 1.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 134 tttattcatgcatgcacgc 152 ||||||||||||||||||| Sbjct: 324 tttattcatgcatgcacgc 342 >gi|45665142|gb|BV125619.1| PZA00102 Zea mays ssp. mays CML69 Zea mays CML69 Zea mays STS genomic, sequence tagged site Length = 467 Score = 38.2 bits (19), Expect = 1.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 134 tttattcatgcatgcacgc 152 ||||||||||||||||||| Sbjct: 322 tttattcatgcatgcacgc 340 >gi|45665140|gb|BV125617.1| PZA00102 Zea mays ssp. mays CML333 Zea mays CML333 Zea mays STS genomic, sequence tagged site Length = 449 Score = 38.2 bits (19), Expect = 1.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 134 tttattcatgcatgcacgc 152 ||||||||||||||||||| Sbjct: 302 tttattcatgcatgcacgc 320 >gi|45665139|gb|BV125616.1| PZA00102 Zea mays ssp. mays Kul11 Zea mays Kul11 Zea mays STS genomic, sequence tagged site Length = 430 Score = 38.2 bits (19), Expect = 1.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 134 tttattcatgcatgcacgc 152 ||||||||||||||||||| Sbjct: 306 tttattcatgcatgcacgc 324 >gi|21210822|gb|AY107744.1| Zea mays PCO069826 mRNA sequence Length = 706 Score = 38.2 bits (19), Expect = 1.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 31 gcttcaagttaccatgcat 49 ||||||||||||||||||| Sbjct: 586 gcttcaagttaccatgcat 568 >gi|6691057|gb|AF205795.1| Zea mays subsp. mays cultivar Cacahuacintle Mex7 b1 gene, B-Mex7b allele, partial sequence Length = 1609 Score = 38.2 bits (19), Expect = 1.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 108 atactattatataatatgt 126 ||||||||||||||||||| Sbjct: 508 atactattatataatatgt 490 >gi|89274329|gb|AC182413.3| Zea mays chromosome UNK clone ZMMBBb-91A12; ZMMBBb0091A12, *** SEQUENCING IN PROGRESS ***, 5 unordered pieces Length = 180424 Score = 38.2 bits (19), Expect = 1.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 102 acatatatactattatata 120 ||||||||||||||||||| Sbjct: 97006 acatatatactattatata 96988 >gi|4152178|gb|AI372312.1|AI372312 au05d08.x1 maize ear glume library Zea mays cDNA clone au05d08 5', mRNA sequence Length = 465 Score = 36.2 bits (18), Expect = 5.6 Identities = 18/18 (100%) Strand = Plus / Minus Query: 382 cagcaggtgccgcacgcc 399 |||||||||||||||||| Sbjct: 405 cagcaggtgccgcacgcc 388 >gi|5740144|gb|AI947834.1|AI947834 603029D02.x1 603 - stressed root cDNA library from Wang/Bohnert lab Zea mays cDNA, mRNA sequence Length = 530 Score = 36.2 bits (18), Expect = 5.6 Identities = 18/18 (100%) Strand = Plus / Minus Query: 207 tagtactcctatatatgt 224 |||||||||||||||||| Sbjct: 41 tagtactcctatatatgt 24 >gi|6964698|gb|AW433391.1|AW433391 707068A11.x1 707 - Mixed adult tissues from Walbot lab (SK) Zea mays cDNA, mRNA sequence Length = 646 Score = 36.2 bits (18), Expect = 5.6 Identities = 18/18 (100%) Strand = Plus / Minus Query: 666 agagagaggtcgacgcgg 683 |||||||||||||||||| Sbjct: 19 agagagaggtcgacgcgg 2 >gi|21809918|gb|BQ668236.1|BQ668236 946104C06.y1 946 - tassel primordium prepared by Schmidt lab Zea mays cDNA, mRNA sequence Length = 588 Score = 36.2 bits (18), Expect = 5.6 Identities = 18/18 (100%) Strand = Plus / Minus Query: 382 cagcaggtgccgcacgcc 399 |||||||||||||||||| Sbjct: 323 cagcaggtgccgcacgcc 306 >gi|26557851|gb|CA830086.1|CA830086 1117002B02.y1 1117 - Unigene V from Maize Genome Project Zea mays cDNA, mRNA sequence Length = 589 Score = 36.2 bits (18), Expect = 5.6 Identities = 18/18 (100%) Strand = Plus / Minus Query: 382 cagcaggtgccgcacgcc 399 |||||||||||||||||| Sbjct: 351 cagcaggtgccgcacgcc 334 >gi|32919405|gb|CF024217.1|CF024217 QBS2e10.xg QBS Zea mays cDNA clone QBS2e10, mRNA sequence Length = 376 Score = 36.2 bits (18), Expect = 5.6 Identities = 18/18 (100%) Strand = Plus / Plus Query: 207 tagtactcctatatatgt 224 |||||||||||||||||| Sbjct: 284 tagtactcctatatatgt 301 >gi|71300453|gb|DR786286.1|DR786286 ZM_BFb0003C12.r ZM_BFb Zea mays cDNA 5', mRNA sequence Length = 888 Score = 36.2 bits (18), Expect = 5.6 Identities = 18/18 (100%) Strand = Plus / Minus Query: 382 cagcaggtgccgcacgcc 399 |||||||||||||||||| Sbjct: 536 cagcaggtgccgcacgcc 519 >gi|71773683|gb|DR971580.1|DR971580 ZM_BFb0094F13.r ZM_BFb Zea mays cDNA 5', mRNA sequence Length = 760 Score = 36.2 bits (18), Expect = 5.6 Identities = 18/18 (100%) Strand = Plus / Minus Query: 382 cagcaggtgccgcacgcc 399 |||||||||||||||||| Sbjct: 436 cagcaggtgccgcacgcc 419 >gi|88757014|gb|DY541155.1|DY541155 ZM_BFb0358P15.r ZM_BFb Zea mays cDNA 5', mRNA sequence Length = 511 Score = 36.2 bits (18), Expect = 5.6 Identities = 18/18 (100%) Strand = Plus / Minus Query: 382 cagcaggtgccgcacgcc 399 |||||||||||||||||| Sbjct: 404 cagcaggtgccgcacgcc 387 >gi|22606061|dbj|BD060455.1| Secreted expressed sequence tags (sESTs) Length = 382 Score = 36.2 bits (18), Expect = 5.6 Identities = 18/18 (100%) Strand = Plus / Minus Query: 243 gcaaagctgctgatgctg 260 |||||||||||||||||| Sbjct: 106 gcaaagctgctgatgctg 89 >gi|40794996|gb|AY506529.1| Zea mays strain NB mitochondrion, complete genome Length = 569630 Score = 36.2 bits (18), Expect = 5.6 Identities = 24/26 (92%) Strand = Plus / Plus Query: 107 tatactattatataatatgttcattt 132 |||||||| |||||||||||||||| Sbjct: 132817 tatactatactataatatgttcattt 132842 >gi|91982805|gb|AC185261.1| Zea mays chromosome UNK clone CH201-376P6; ZMMBBc0376P06, *** SEQUENCING IN PROGRESS ***, 25 unordered pieces Length = 154814 Score = 36.2 bits (18), Expect = 5.6 Identities = 18/18 (100%) Strand = Plus / Plus Query: 522 gagcgagagcgagaagag 539 |||||||||||||||||| Sbjct: 70945 gagcgagagcgagaagag 70962 Score = 36.2 bits (18), Expect = 5.6 Identities = 18/18 (100%) Strand = Plus / Minus Query: 506 ggagcagcaggacgacga 523 |||||||||||||||||| Sbjct: 10857 ggagcagcaggacgacga 10840 >gi|58082364|gb|AC155504.2| Zea mays strain B73 clone ZMMBBc0036K21, *** SEQUENCING IN PROGRESS ***, 22 unordered pieces Length = 194885 Score = 36.2 bits (18), Expect = 5.6 Identities = 18/18 (100%) Strand = Plus / Minus Query: 519 gacgagcgagagcgagaa 536 |||||||||||||||||| Sbjct: 142662 gacgagcgagagcgagaa 142645 Database: mais_NCBI.fasta Posted date: Apr 26, 2006 11:51 AM Number of letters in database: 669,372,029 Number of sequences in database: 836,351 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 295,017 Number of Sequences: 836351 Number of extensions: 295017 Number of successful extensions: 24875 Number of sequences better than 10.0: 85 Number of HSP's better than 10.0 without gapping: 85 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 24698 Number of HSP's gapped (non-prelim): 170 length of query: 683 length of database: 669,372,029 effective HSP length: 19 effective length of query: 664 effective length of database: 653,481,360 effective search space: 433911623040 effective search space used: 433911623040 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 18 (36.2 bits)