BLASTN 2.2.6 [Apr-09-2003] BLASTN 2.2.6 [Apr-09-2003] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= 3670899.2.1 (555 letters) Database: mais_NCBI.fasta 836,351 sequences; 669,372,029 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|6681805|gb|AW287792.1|AW287792 829008G09.x1 829 - Silk infect... 1092 0.0 gi|71434123|gb|DR815173.1|DR815173 ZM_BFb0045D05.f ZM_BFb Zea ma... 1082 0.0 gi|90265907|gb|AC183914.1| Zea mays chromosome UNK clone CH201-2... 1082 0.0 gi|71445030|gb|DR826080.1|DR826080 ZM_BFb0068L06.f ZM_BFb Zea ma... 1067 0.0 gi|37374868|gb|CF623831.1|CF623831 zmrws05_0A10-012-h07.s2 zmrws... 785 0.0 gi|32797325|gb|CD949561.1|CD949561 SAL_61 GeneTag2 Zea mays cDNA... 597 e-169 gi|18450776|gb|BM429054.1|BM429054 952027D08.y1 952 - BMS tissue... 48 0.001 gi|18450783|gb|BM429061.1|BM429061 952027D12.y1 952 - BMS tissue... 48 0.001 gi|89106370|gb|DY576587.1|DY576587 III-952-4B-B09.M13-R UGIII-Re... 48 0.001 gi|89106384|gb|DY576601.1|DY576601 III-952-4C-E07.M13-R UGIII-Re... 48 0.001 gi|22489838|gb|BU049761.1|BU049761 1111014B09.y1 1111 - Unigene ... 40 0.29 gi|31250273|gb|CD219297.1|CD219297 EST0194 Zea mays embryo sac c... 40 0.29 gi|58082449|gb|AC155590.2| Zea mays strain B73 clone ZMMBBc0203A... 40 0.29 gi|5455927|gb|AI833617.1|AI833617 605092H11.x1 605 - Endosperm c... 38 1.1 gi|32791196|gb|CD943432.1|CD943432 RCQ_41 GeneTag1 Zea mays cDNA... 38 1.1 gi|32824553|gb|CD964275.1|CD964275 SEB_14 GeneTag2 Zea mays cDNA... 38 1.1 gi|71305265|gb|DR788766.1|DR788766 ZM_BFb0006O22.f ZM_BFb Zea ma... 38 1.1 gi|76013701|gb|DT940871.1|DT940871 ZM_BFb0123O05.f ZM_BFb Zea ma... 38 1.1 gi|78027110|gb|DV495497.1|DV495497 1000121-F01.T7-1 UGI-Reseq Ze... 38 1.1 gi|78122756|gb|DV541140.1|DV541140 ZM_BFb0235M15.f ZM_BFb Zea ma... 38 1.1 gi|8367900|gb|BE050845.1|BE050845 za70b06.b50 Maize Glume cDNAs ... 36 4.5 gi|15590079|gb|BI674695.1|BI674695 949066C03.y2 949 - Juvenile l... 36 4.5 gi|50328106|gb|CO523232.1|CO523232 3530_1_153_1_F01.y_1 3530 - F... 36 4.5 gi|71298151|gb|DR785052.1|DR785052 ZM_BFb0001G22.r ZM_BFb Zea ma... 36 4.5 gi|71423554|gb|DR806076.1|DR806076 ZM_BFb0031N10.f ZM_BFb Zea ma... 36 4.5 gi|71440982|gb|DR822032.1|DR822032 ZM_BFb0062B12.r ZM_BFb Zea ma... 36 4.5 gi|78089448|gb|DV517822.1|DV517822 ZM_BFb0201I08.r ZM_BFb Zea ma... 36 4.5 gi|78111367|gb|DV529764.1|DV529764 ZM_BFb0218M15.r ZM_BFb Zea ma... 36 4.5 gi|91048835|gb|EB159253.1|EB159253 ZM_BFb0294E22.r ZM_BFb Zea ma... 36 4.5 gi|91874730|gb|EB404687.1|EB404687 ZM_BFb0314B22.f ZM_BFb Zea ma... 36 4.5 gi|92110165|gb|AC185302.1| Zea mays chromosome UNK clone CH201-4... 36 4.5 gi|90186364|gb|AC183890.1| Zea mays chromosome UNK clone CH201-5... 36 4.5 gi|88687863|gb|AC182830.1| Zea mays chromosome UNK clone CH201-1... 36 4.5 gi|92087082|gb|AC165175.2| Zea mays clone ZMMBBb-136N21, complet... 36 4.5 gi|58082406|gb|AC155547.2| Zea mays strain B73 clone ZMMBBc0156P... 36 4.5 gi|58082268|gb|AC155406.2| Zea mays strain B73 clone ZMMBBb0184O... 36 4.5 gi|51315592|gb|AC147603.5| Zea mays clone ZMMBBc0307D13, *** SEQ... 36 4.5 >gi|6681805|gb|AW287792.1|AW287792 829008G09.x1 829 - Silk infected with Fusarium Zea mays cDNA, mRNA sequence Length = 555 Score = 1092 bits (551), Expect = 0.0 Identities = 554/555 (99%) Strand = Plus / Plus Query: 1 ttgcacctgtacacgactacaaggtaccgcttaaacgaatacaacgaatctcgaaatgcc 60 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 1 ttgcacctgtacacgactacaaggtaccgcttaaacgaatacaaggaatctcgaaatgcc 60 Query: 61 taactccacagaccacaggccagacacgcagttcagaaaagagttggatcgtcgagctgt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 taactccacagaccacaggccagacacgcagttcagaaaagagttggatcgtcgagctgt 120 Query: 121 acgtccactgagagagttagctatcgaacaacttgaggccgaagccgacgtcctcgcagt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 acgtccactgagagagttagctatcgaacaacttgaggccgaagccgacgtcctcgcagt 180 Query: 181 gccggacgtacggcttgacagcggcgacgtcgacgtccgtcttggccctgcacccgagga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 gccggacgtacggcttgacagcggcgacgtcgacgtccgtcttggccctgcacccgagga 240 Query: 241 tcggcggcgagtgcaggcacggctccacggacgtggaccggacgcacgcgacgtcggagg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 tcggcggcgagtgcaggcacggctccacggacgtggaccggacgcacgcgacgtcggagg 300 Query: 301 tctccctgttccagtccggccggatcaggatccacggcttcacgccggcgaagctgtacg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 tctccctgttccagtccggccggatcaggatccacggcttcacgccggcgaagctgtacg 360 Query: 361 cgacgtagccgaaggtggaccaggcgctcatcgtgatcttgtcgcagtagctgagcaggt 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 cgacgtagccgaaggtggaccaggcgctcatcgtgatcttgtcgcagtagctgagcaggt 420 Query: 421 agatctcggccagcgccttctggttgtggtcgttggacgtgtactgctgctgctcctcgt 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 421 agatctcggccagcgccttctggttgtggtcgttggacgtgtactgctgctgctcctcgt 480 Query: 481 ggctgggctggaacaccgccacgatctccccactcttggtggggctctcgtagtacatgc 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 481 ggctgggctggaacaccgccacgatctccccactcttggtggggctctcgtagtacatgc 540 Query: 541 cgggatcttctcgta 555 ||||||||||||||| Sbjct: 541 cgggatcttctcgta 555 >gi|71434123|gb|DR815173.1|DR815173 ZM_BFb0045D05.f ZM_BFb Zea mays cDNA 3', mRNA sequence Length = 739 Score = 1082 bits (546), Expect = 0.0 Identities = 553/554 (99%), Gaps = 1/554 (0%) Strand = Plus / Plus Query: 3 gcacctgtacacgactacaaggtaccgcttaaacgaatacaacgaatctcgaaatgccta 62 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46 gcacctgtacacgactacaaggtaccgcttaaacgaatacaacgaatctcgaaatgccta 105 Query: 63 actccacagaccacaggccagacacgcagttcagaaaagagttggatcgtcgagctgtac 122 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106 actccacagaccacaggccagacacgcagttcagaaaagagttggatcgtcgagctgtac 165 Query: 123 gtccactgagagagttagctatcgaacaacttgaggccgaagccgacgtcctcgcagtgc 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 166 gtccactgagagagttagctatcgaacaacttgaggccgaagccgacgtcctcgcagtgc 225 Query: 183 cggacgtacggcttgacagcggcgacgtcgacgtccgtcttggccctgcacccgaggatc 242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 226 cggacgtacggcttgacagcggcgacgtcgacgtccgtcttggccctgcacccgaggatc 285 Query: 243 ggcggcgagtgcaggcacggctccacggacgtggaccggacgcacgcgacgtcggaggtc 302 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 286 ggcggcgagtgcaggcacggctccacggacgtggaccggacgcacgcgacgtcggaggtc 345 Query: 303 tccctgttccagtccggccggatcaggatccacggcttcacgccggcgaagctgtacgcg 362 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 346 tccctgttccagtccggccggatcaggatccacggcttcacgccggcgaagctgtacgcg 405 Query: 363 acgtagccgaaggtggaccaggcgctcatcgtgatcttgtcgcagtagctgagcaggtag 422 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 406 acgtagccgaaggtggaccaggcgctcatcgtgatcttgtcgcagtagctgagcaggtag 465 Query: 423 atctcggccagcgccttctggttgtggtcgttggacgtgtactgctgctgctcctcgtgg 482 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 466 atctcggccagcgccttctggttgtggtcgttggacgtgtactgctgctgctcctcgtgg 525 Query: 483 ctgggctggaacaccgccacgatctccccactcttggtggggctctcgtagtacatgccg 542 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 526 ctgggctggaacaccgccacgatctccccactcttggtggggctctcgtagtacatgccg 585 Query: 543 -ggatcttctcgta 555 ||||||||||||| Sbjct: 586 cggatcttctcgta 599 >gi|90265907|gb|AC183914.1| Zea mays chromosome UNK clone CH201-251O11; ZMMBBc0251O11, *** SEQUENCING IN PROGRESS ***, 26 unordered pieces Length = 143748 Score = 1082 bits (546), Expect = 0.0 Identities = 553/554 (99%), Gaps = 1/554 (0%) Strand = Plus / Plus Query: 3 gcacctgtacacgactacaaggtaccgcttaaacgaatacaacgaatctcgaaatgccta 62 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 101238 gcacctgtacacgactacaaggtaccgcttaaacgaatacaacgaatctcgaaatgccta 101297 Query: 63 actccacagaccacaggccagacacgcagttcagaaaagagttggatcgtcgagctgtac 122 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 101298 actccacagaccacaggccagacacgcagttcagaaaagagttggatcgtcgagctgtac 101357 Query: 123 gtccactgagagagttagctatcgaacaacttgaggccgaagccgacgtcctcgcagtgc 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 101358 gtccactgagagagttagctatcgaacaacttgaggccgaagccgacgtcctcgcagtgc 101417 Query: 183 cggacgtacggcttgacagcggcgacgtcgacgtccgtcttggccctgcacccgaggatc 242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 101418 cggacgtacggcttgacagcggcgacgtcgacgtccgtcttggccctgcacccgaggatc 101477 Query: 243 ggcggcgagtgcaggcacggctccacggacgtggaccggacgcacgcgacgtcggaggtc 302 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 101478 ggcggcgagtgcaggcacggctccacggacgtggaccggacgcacgcgacgtcggaggtc 101537 Query: 303 tccctgttccagtccggccggatcaggatccacggcttcacgccggcgaagctgtacgcg 362 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 101538 tccctgttccagtccggccggatcaggatccacggcttcacgccggcgaagctgtacgcg 101597 Query: 363 acgtagccgaaggtggaccaggcgctcatcgtgatcttgtcgcagtagctgagcaggtag 422 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 101598 acgtagccgaaggtggaccaggcgctcatcgtgatcttgtcgcagtagctgagcaggtag 101657 Query: 423 atctcggccagcgccttctggttgtggtcgttggacgtgtactgctgctgctcctcgtgg 482 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 101658 atctcggccagcgccttctggttgtggtcgttggacgtgtactgctgctgctcctcgtgg 101717 Query: 483 ctgggctggaacaccgccacgatctccccactcttggtggggctctcgtagtacatgccg 542 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 101718 ctgggctggaacaccgccacgatctccccactcttggtggggctctcgtagtacatgccg 101777 Query: 543 -ggatcttctcgta 555 ||||||||||||| Sbjct: 101778 cggatcttctcgta 101791 Score = 54.0 bits (27), Expect = 2e-05 Identities = 30/31 (96%) Strand = Plus / Plus Query: 461 gtactgctgctgctcctcgtggctgggctgg 491 ||||||||||||| ||||||||||||||||| Sbjct: 56431 gtactgctgctgcccctcgtggctgggctgg 56461 >gi|71445030|gb|DR826080.1|DR826080 ZM_BFb0068L06.f ZM_BFb Zea mays cDNA 3', mRNA sequence Length = 728 Score = 1067 bits (538), Expect = 0.0 Identities = 551/554 (99%), Gaps = 1/554 (0%) Strand = Plus / Plus Query: 3 gcacctgtacacgactacaaggtaccgcttaaacgaatacaacgaatctcgaaatgccta 62 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 18 gcacctgtacacgactacaaggtaccgcttaaacgaatacaacgaatctcgaaatgccta 77 Query: 63 actccacagaccacaggccagacacgcagttcagaaaagagttggatcgtcgagctgtac 122 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 78 actccacagaccacaggccagacacgcagttcaaaaaagagttggatcgtcgagctgtac 137 Query: 123 gtccactgagagagttagctatcgaacaacttgaggccgaagccgacgtcctcgcagtgc 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138 gtccactgagagagttagctatcgaacaacttgaggccgaagccgacgtcctcgcagtgc 197 Query: 183 cggacgtacggcttgacagcggcgacgtcgacgtccgtcttggccctgcacccgaggatc 242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 198 cggacgtacggcttgacagcggcgacgtcgacgtccgtcttggccctgcacccgaggatc 257 Query: 243 ggcggcgagtgcaggcacggctccacggacgtggaccggacgcacgcgacgtcggaggtc 302 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 258 ggcggcgagtgcaggcacggctccacggacgtggaccggacgcacgcgacgtcggaggtc 317 Query: 303 tccctgttccagtccggccggatcaggatccacggcttcacgccggcgaagctgtacgcg 362 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 318 tccctgttccagtccggccggatcaggatccacggcttcacgccggcgaagctgtacgcg 377 Query: 363 acgtagccgaaggtggaccaggcgctcatcgtgatcttgtcgcagtagctgagcaggtag 422 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 378 acgtaaccgaaggtggaccaggcgctcatcgtgatcttgtcgcagtagctgagcaggtag 437 Query: 423 atctcggccagcgccttctggttgtggtcgttggacgtgtactgctgctgctcctcgtgg 482 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 438 atctcggccagcgccttctggttgtggtcgttggacgtgtactgctgctgctcctcgtgg 497 Query: 483 ctgggctggaacaccgccacgatctccccactcttggtggggctctcgtagtacatgccg 542 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 498 ctgggctggaacaccgccacgatctccccactcttggtggggctctcgtagtacatgccg 557 Query: 543 -ggatcttctcgta 555 ||||||||||||| Sbjct: 558 cggatcttctcgta 571 >gi|37374868|gb|CF623831.1|CF623831 zmrws05_0A10-012-h07.s2 zmrws05 Zea mays cDNA 3', mRNA sequence Length = 447 Score = 785 bits (396), Expect = 0.0 Identities = 396/396 (100%) Strand = Plus / Plus Query: 3 gcacctgtacacgactacaaggtaccgcttaaacgaatacaacgaatctcgaaatgccta 62 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 41 gcacctgtacacgactacaaggtaccgcttaaacgaatacaacgaatctcgaaatgccta 100 Query: 63 actccacagaccacaggccagacacgcagttcagaaaagagttggatcgtcgagctgtac 122 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 101 actccacagaccacaggccagacacgcagttcagaaaagagttggatcgtcgagctgtac 160 Query: 123 gtccactgagagagttagctatcgaacaacttgaggccgaagccgacgtcctcgcagtgc 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 161 gtccactgagagagttagctatcgaacaacttgaggccgaagccgacgtcctcgcagtgc 220 Query: 183 cggacgtacggcttgacagcggcgacgtcgacgtccgtcttggccctgcacccgaggatc 242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 221 cggacgtacggcttgacagcggcgacgtcgacgtccgtcttggccctgcacccgaggatc 280 Query: 243 ggcggcgagtgcaggcacggctccacggacgtggaccggacgcacgcgacgtcggaggtc 302 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 281 ggcggcgagtgcaggcacggctccacggacgtggaccggacgcacgcgacgtcggaggtc 340 Query: 303 tccctgttccagtccggccggatcaggatccacggcttcacgccggcgaagctgtacgcg 362 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 341 tccctgttccagtccggccggatcaggatccacggcttcacgccggcgaagctgtacgcg 400 Query: 363 acgtagccgaaggtggaccaggcgctcatcgtgatc 398 |||||||||||||||||||||||||||||||||||| Sbjct: 401 acgtagccgaaggtggaccaggcgctcatcgtgatc 436 >gi|32797325|gb|CD949561.1|CD949561 SAL_61 GeneTag2 Zea mays cDNA, mRNA sequence Length = 301 Score = 597 bits (301), Expect = e-169 Identities = 301/301 (100%) Strand = Plus / Minus Query: 32 taaacgaatacaacgaatctcgaaatgcctaactccacagaccacaggccagacacgcag 91 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 taaacgaatacaacgaatctcgaaatgcctaactccacagaccacaggccagacacgcag 242 Query: 92 ttcagaaaagagttggatcgtcgagctgtacgtccactgagagagttagctatcgaacaa 151 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 ttcagaaaagagttggatcgtcgagctgtacgtccactgagagagttagctatcgaacaa 182 Query: 152 cttgaggccgaagccgacgtcctcgcagtgccggacgtacggcttgacagcggcgacgtc 211 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 cttgaggccgaagccgacgtcctcgcagtgccggacgtacggcttgacagcggcgacgtc 122 Query: 212 gacgtccgtcttggccctgcacccgaggatcggcggcgagtgcaggcacggctccacgga 271 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 gacgtccgtcttggccctgcacccgaggatcggcggcgagtgcaggcacggctccacgga 62 Query: 272 cgtggaccggacgcacgcgacgtcggaggtctccctgttccagtccggccggatcaggat 331 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 cgtggaccggacgcacgcgacgtcggaggtctccctgttccagtccggccggatcaggat 2 Query: 332 c 332 | Sbjct: 1 c 1 >gi|18450776|gb|BM429054.1|BM429054 952027D08.y1 952 - BMS tissue from Walbot Lab (reduced rRNA) Zea mays cDNA, mRNA sequence Length = 557 Score = 48.1 bits (24), Expect = 0.001 Identities = 36/40 (90%) Strand = Plus / Plus Query: 409 agctgagcaggtagatctcggccagcgccttctggttgtg 448 ||||||||||||||||||| || ||||| |||||||||| Sbjct: 71 agctgagcaggtagatctccgcgagcgctctctggttgtg 110 >gi|18450783|gb|BM429061.1|BM429061 952027D12.y1 952 - BMS tissue from Walbot Lab (reduced rRNA) Zea mays cDNA, mRNA sequence Length = 357 Score = 48.1 bits (24), Expect = 0.001 Identities = 36/40 (90%) Strand = Plus / Plus Query: 409 agctgagcaggtagatctcggccagcgccttctggttgtg 448 ||||||||||||||||||| || ||||| |||||||||| Sbjct: 108 agctgagcaggtagatctccgcgagcgctctctggttgtg 147 >gi|89106370|gb|DY576587.1|DY576587 III-952-4B-B09.M13-R UGIII-Reseq Zea mays cDNA, mRNA sequence Length = 594 Score = 48.1 bits (24), Expect = 0.001 Identities = 36/40 (90%) Strand = Plus / Plus Query: 409 agctgagcaggtagatctcggccagcgccttctggttgtg 448 ||||||||||||||||||| || ||||| |||||||||| Sbjct: 99 agctgagcaggtagatctccgcgagcgctctctggttgtg 138 >gi|89106384|gb|DY576601.1|DY576601 III-952-4C-E07.M13-R UGIII-Reseq Zea mays cDNA, mRNA sequence Length = 632 Score = 48.1 bits (24), Expect = 0.001 Identities = 36/40 (90%) Strand = Plus / Plus Query: 409 agctgagcaggtagatctcggccagcgccttctggttgtg 448 ||||||||||||||||||| || ||||| |||||||||| Sbjct: 99 agctgagcaggtagatctccgcgagcgctctctggttgtg 138 >gi|22489838|gb|BU049761.1|BU049761 1111014B09.y1 1111 - Unigene III from Maize Genome Project Zea mays cDNA, mRNA sequence Length = 502 Score = 40.1 bits (20), Expect = 0.29 Identities = 26/28 (92%) Strand = Plus / Plus Query: 409 agctgagcaggtagatctcggccagcgc 436 ||||||||||||||||||| || ||||| Sbjct: 52 agctgagcaggtagatctccgcgagcgc 79 >gi|31250273|gb|CD219297.1|CD219297 EST0194 Zea mays embryo sac cDNA library Zea mays cDNA clone ES0557 5' similar to Galactoside 2-alpha-L-fucosyltransferase, mRNA sequence Length = 734 Score = 40.1 bits (20), Expect = 0.29 Identities = 23/24 (95%) Strand = Plus / Minus Query: 473 ctcctcgtggctgggctggaacac 496 |||||||||||| ||||||||||| Sbjct: 174 ctcctcgtggctcggctggaacac 151 Score = 38.2 bits (19), Expect = 1.1 Identities = 22/23 (95%) Strand = Plus / Minus Query: 329 gatccacggcttcacgccggcga 351 |||||||||||||| |||||||| Sbjct: 318 gatccacggcttcaggccggcga 296 >gi|58082449|gb|AC155590.2| Zea mays strain B73 clone ZMMBBc0203A06, *** SEQUENCING IN PROGRESS ***, 32 unordered pieces Length = 188872 Score = 40.1 bits (20), Expect = 0.29 Identities = 23/24 (95%) Strand = Plus / Minus Query: 473 ctcctcgtggctgggctggaacac 496 |||||||||||| ||||||||||| Sbjct: 87066 ctcctcgtggctcggctggaacac 87043 Score = 38.2 bits (19), Expect = 1.1 Identities = 22/23 (95%) Strand = Plus / Minus Query: 329 gatccacggcttcacgccggcga 351 |||||||||||||| |||||||| Sbjct: 87210 gatccacggcttcaggccggcga 87188 >gi|5455927|gb|AI833617.1|AI833617 605092H11.x1 605 - Endosperm cDNA library from Schmidt lab Zea mays cDNA, mRNA sequence Length = 633 Score = 38.2 bits (19), Expect = 1.1 Identities = 19/19 (100%) Strand = Plus / Plus Query: 460 tgtactgctgctgctcctc 478 ||||||||||||||||||| Sbjct: 231 tgtactgctgctgctcctc 249 >gi|32791196|gb|CD943432.1|CD943432 RCQ_41 GeneTag1 Zea mays cDNA, mRNA sequence Length = 104 Score = 38.2 bits (19), Expect = 1.1 Identities = 22/23 (95%) Strand = Plus / Minus Query: 329 gatccacggcttcacgccggcga 351 |||||||||||||| |||||||| Sbjct: 97 gatccacggcttcaggccggcga 75 >gi|32824553|gb|CD964275.1|CD964275 SEB_14 GeneTag2 Zea mays cDNA, mRNA sequence Length = 104 Score = 38.2 bits (19), Expect = 1.1 Identities = 22/23 (95%) Strand = Plus / Minus Query: 329 gatccacggcttcacgccggcga 351 |||||||||||||| |||||||| Sbjct: 97 gatccacggcttcaggccggcga 75 >gi|71305265|gb|DR788766.1|DR788766 ZM_BFb0006O22.f ZM_BFb Zea mays cDNA 3', mRNA sequence Length = 672 Score = 38.2 bits (19), Expect = 1.1 Identities = 28/31 (90%) Strand = Plus / Plus Query: 466 gctgctgctcctcgtggctgggctggaacac 496 |||| |||||||||||||| |||||| |||| Sbjct: 175 gctggtgctcctcgtggctcggctggtacac 205 >gi|76013701|gb|DT940871.1|DT940871 ZM_BFb0123O05.f ZM_BFb Zea mays cDNA 3', mRNA sequence Length = 808 Score = 38.2 bits (19), Expect = 1.1 Identities = 19/19 (100%) Strand = Plus / Plus Query: 473 ctcctcgtggctgggctgg 491 ||||||||||||||||||| Sbjct: 411 ctcctcgtggctgggctgg 429 >gi|78027110|gb|DV495497.1|DV495497 1000121-F01.T7-1 UGI-Reseq Zea mays cDNA, mRNA sequence Length = 643 Score = 38.2 bits (19), Expect = 1.1 Identities = 19/19 (100%) Strand = Plus / Plus Query: 460 tgtactgctgctgctcctc 478 ||||||||||||||||||| Sbjct: 266 tgtactgctgctgctcctc 284 >gi|78122756|gb|DV541140.1|DV541140 ZM_BFb0235M15.f ZM_BFb Zea mays cDNA 3', mRNA sequence Length = 752 Score = 38.2 bits (19), Expect = 1.1 Identities = 28/31 (90%) Strand = Plus / Plus Query: 466 gctgctgctcctcgtggctgggctggaacac 496 |||| |||||||||||||| |||||| |||| Sbjct: 175 gctggtgctcctcgtggctcggctggtacac 205 >gi|8367900|gb|BE050845.1|BE050845 za70b06.b50 Maize Glume cDNAs Library Zea mays cDNA clone za70b06 5', mRNA sequence Length = 477 Score = 36.2 bits (18), Expect = 4.5 Identities = 18/18 (100%) Strand = Plus / Minus Query: 464 ctgctgctgctcctcgtg 481 |||||||||||||||||| Sbjct: 19 ctgctgctgctcctcgtg 2 >gi|15590079|gb|BI674695.1|BI674695 949066C03.y2 949 - Juvenile leaf and shoot cDNA from Steve Moose Zea mays cDNA, mRNA sequence Length = 551 Score = 36.2 bits (18), Expect = 4.5 Identities = 21/22 (95%) Strand = Plus / Minus Query: 482 gctgggctggaacaccgccacg 503 ||||||||||||| |||||||| Sbjct: 48 gctgggctggaacgccgccacg 27 >gi|50328106|gb|CO523232.1|CO523232 3530_1_153_1_F01.y_1 3530 - Full length cDNA library created by Invitrogen from multiple tissues Zea mays cDNA, mRNA sequence Length = 614 Score = 36.2 bits (18), Expect = 4.5 Identities = 18/18 (100%) Strand = Plus / Minus Query: 464 ctgctgctgctcctcgtg 481 |||||||||||||||||| Sbjct: 471 ctgctgctgctcctcgtg 454 >gi|71298151|gb|DR785052.1|DR785052 ZM_BFb0001G22.r ZM_BFb Zea mays cDNA 5', mRNA sequence Length = 842 Score = 36.2 bits (18), Expect = 4.5 Identities = 18/18 (100%) Strand = Plus / Minus Query: 464 ctgctgctgctcctcgtg 481 |||||||||||||||||| Sbjct: 556 ctgctgctgctcctcgtg 539 >gi|71423554|gb|DR806076.1|DR806076 ZM_BFb0031N10.f ZM_BFb Zea mays cDNA 3', mRNA sequence Length = 725 Score = 36.2 bits (18), Expect = 4.5 Identities = 18/18 (100%) Strand = Plus / Plus Query: 153 ttgaggccgaagccgacg 170 |||||||||||||||||| Sbjct: 655 ttgaggccgaagccgacg 672 >gi|71440982|gb|DR822032.1|DR822032 ZM_BFb0062B12.r ZM_BFb Zea mays cDNA 5', mRNA sequence Length = 789 Score = 36.2 bits (18), Expect = 4.5 Identities = 18/18 (100%) Strand = Plus / Minus Query: 464 ctgctgctgctcctcgtg 481 |||||||||||||||||| Sbjct: 511 ctgctgctgctcctcgtg 494 >gi|78089448|gb|DV517822.1|DV517822 ZM_BFb0201I08.r ZM_BFb Zea mays cDNA 5', mRNA sequence Length = 816 Score = 36.2 bits (18), Expect = 4.5 Identities = 18/18 (100%) Strand = Plus / Minus Query: 65 tccacagaccacaggcca 82 |||||||||||||||||| Sbjct: 314 tccacagaccacaggcca 297 >gi|78111367|gb|DV529764.1|DV529764 ZM_BFb0218M15.r ZM_BFb Zea mays cDNA 5', mRNA sequence Length = 837 Score = 36.2 bits (18), Expect = 4.5 Identities = 18/18 (100%) Strand = Plus / Minus Query: 464 ctgctgctgctcctcgtg 481 |||||||||||||||||| Sbjct: 277 ctgctgctgctcctcgtg 260 >gi|91048835|gb|EB159253.1|EB159253 ZM_BFb0294E22.r ZM_BFb Zea mays cDNA 5', mRNA sequence Length = 667 Score = 36.2 bits (18), Expect = 4.5 Identities = 18/18 (100%) Strand = Plus / Minus Query: 464 ctgctgctgctcctcgtg 481 |||||||||||||||||| Sbjct: 390 ctgctgctgctcctcgtg 373 >gi|91874730|gb|EB404687.1|EB404687 ZM_BFb0314B22.f ZM_BFb Zea mays cDNA 3', mRNA sequence Length = 438 Score = 36.2 bits (18), Expect = 4.5 Identities = 18/18 (100%) Strand = Plus / Minus Query: 102 agttggatcgtcgagctg 119 |||||||||||||||||| Sbjct: 232 agttggatcgtcgagctg 215 >gi|92110165|gb|AC185302.1| Zea mays chromosome UNK clone CH201-422E5; ZMMBBc0422E05, *** SEQUENCING IN PROGRESS ***, 23 unordered pieces Length = 177170 Score = 36.2 bits (18), Expect = 4.5 Identities = 18/18 (100%) Strand = Plus / Minus Query: 246 ggcgagtgcaggcacggc 263 |||||||||||||||||| Sbjct: 23996 ggcgagtgcaggcacggc 23979 >gi|90186364|gb|AC183890.1| Zea mays chromosome UNK clone CH201-541A21; ZMMBBc0541A21, *** SEQUENCING IN PROGRESS ***, 19 unordered pieces Length = 179834 Score = 36.2 bits (18), Expect = 4.5 Identities = 18/18 (100%) Strand = Plus / Minus Query: 96 gaaaagagttggatcgtc 113 |||||||||||||||||| Sbjct: 34565 gaaaagagttggatcgtc 34548 >gi|88687863|gb|AC182830.1| Zea mays chromosome UNK clone CH201-188D1, *** SEQUENCING IN PROGRESS ***, 22 unordered pieces Length = 179003 Score = 36.2 bits (18), Expect = 4.5 Identities = 18/18 (100%) Strand = Plus / Minus Query: 158 gccgaagccgacgtcctc 175 |||||||||||||||||| Sbjct: 81271 gccgaagccgacgtcctc 81254 >gi|92087082|gb|AC165175.2| Zea mays clone ZMMBBb-136N21, complete sequence Length = 129274 Score = 36.2 bits (18), Expect = 4.5 Identities = 18/18 (100%) Strand = Plus / Minus Query: 96 gaaaagagttggatcgtc 113 |||||||||||||||||| Sbjct: 19745 gaaaagagttggatcgtc 19728 >gi|58082406|gb|AC155547.2| Zea mays strain B73 clone ZMMBBc0156P09, *** SEQUENCING IN PROGRESS ***, 17 unordered pieces Length = 162034 Score = 36.2 bits (18), Expect = 4.5 Identities = 18/18 (100%) Strand = Plus / Minus Query: 464 ctgctgctgctcctcgtg 481 |||||||||||||||||| Sbjct: 120588 ctgctgctgctcctcgtg 120571 >gi|58082268|gb|AC155406.2| Zea mays strain B73 clone ZMMBBb0184O23, *** SEQUENCING IN PROGRESS ***, 10 unordered pieces Length = 119483 Score = 36.2 bits (18), Expect = 4.5 Identities = 18/18 (100%) Strand = Plus / Plus Query: 96 gaaaagagttggatcgtc 113 |||||||||||||||||| Sbjct: 98 gaaaagagttggatcgtc 115 >gi|51315592|gb|AC147603.5| Zea mays clone ZMMBBc0307D13, *** SEQUENCING IN PROGRESS ***, 2 ordered pieces Length = 78404 Score = 36.2 bits (18), Expect = 4.5 Identities = 18/18 (100%) Strand = Plus / Plus Query: 64 ctccacagaccacaggcc 81 |||||||||||||||||| Sbjct: 69689 ctccacagaccacaggcc 69706 Database: mais_NCBI.fasta Posted date: Apr 26, 2006 11:51 AM Number of letters in database: 669,372,029 Number of sequences in database: 836,351 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 249,169 Number of Sequences: 836351 Number of extensions: 249169 Number of successful extensions: 21429 Number of sequences better than 10.0: 38 Number of HSP's better than 10.0 without gapping: 38 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 21334 Number of HSP's gapped (non-prelim): 92 length of query: 555 length of database: 669,372,029 effective HSP length: 19 effective length of query: 536 effective length of database: 653,481,360 effective search space: 350266008960 effective search space used: 350266008960 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 18 (36.2 bits)