BLASTN 2.2.6 [Apr-09-2003] BLASTN 2.2.6 [Apr-09-2003] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= 3642920.2.1 (570 letters) Database: mais_NCBI.fasta 836,351 sequences; 669,372,029 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|6637057|gb|AW261329.1|AW261329 687077C06.y1 687 - Early embry... 1130 0.0 gi|78076056|gb|DV504490.1|DV504490 ZM_BFb0181G08.r ZM_BFb Zea ma... 860 0.0 gi|14191162|gb|BG833392.1|BG833392 951007E09.x2 951 - BMS tissue... 775 0.0 gi|21208469|gb|AY105391.1| Zea mays PCO078108 mRNA sequence 769 0.0 gi|21208469|gb|AY105391.1| Zea mays PCO078108 mRNA sequence 769 0.0 gi|29129742|gb|CB380446.1|CB380446 3529_1_22_1_B08.y_2 3529 - 2 ... 163 3e-38 gi|76010442|gb|DT937612.1|DT937612 ZM_BFb0117C05.f ZM_BFb Zea ma... 92 9e-17 gi|7216542|gb|AW562664.1|AW562664 660068G04.y1 660 - Mixed stage... 54 2e-05 gi|18170741|gb|BM340581.1|BM340581 MEST324-F10.T3 ISUM5-RN Zea m... 54 2e-05 gi|26456626|gb|CA828209.1|CA828209 1114025C08.y4 1114 - Unigene ... 54 2e-05 gi|76286569|gb|DV026137.1|DV026137 ZM_BFb0147A16.r ZM_BFb Zea ma... 54 2e-05 gi|78074285|gb|DV502719.1|DV502719 ZM_BFb0174K17.r ZM_BFb Zea ma... 54 2e-05 gi|21209366|gb|AY106288.1| Zea mays PCO089569 mRNA sequence 54 2e-05 gi|21209366|gb|AY106288.1| Zea mays PCO089569 mRNA sequence 54 2e-05 gi|61119538|gb|DN560499.1|DN560499 ME19-B07-T3-96-R1 E7PCR Zea m... 52 8e-05 gi|60356225|gb|DN223198.1|DN223198 MEST1139_F04.T7-1 UGA-ZmSAM-X... 44 0.019 gi|60356870|gb|DN223843.1|DN223843 MEST1148_G10.T7-1 UGA-ZmSAM-X... 44 0.019 gi|62550399|gb|DN830819.1|DN830819 EST7032 Zea mays embryo sac c... 44 0.019 gi|89760316|gb|DY688779.1|DY688779 ZM_BFb0284C12.r ZM_BFb Zea ma... 44 0.019 gi|89257786|gb|AC177908.2| Zea mays chromosome UNK clone CH201-1... 40 0.30 gi|13515967|gb|BG518243.1|BG518243 947069C05.y2 947 - 2 week sho... 38 1.2 gi|45567905|gb|CK985805.1|CK985805 zmrsub1_0B10-010-b12.s0 zmrsu... 38 1.2 gi|71436445|gb|DR817495.1|DR817495 ZM_BFb0050O12.r ZM_BFb Zea ma... 36 4.6 gi|74237572|gb|DT645486.1|DT645486 ZM_BFb0105I13.r ZM_BFb Zea ma... 36 4.6 gi|76018202|gb|DT945372.1|DT945372 ZM_BFb0132I23.f ZM_BFb Zea ma... 36 4.6 gi|76018203|gb|DT945373.1|DT945373 ZM_BFb0132I23.r ZM_BFb Zea ma... 36 4.6 gi|83279379|gb|DV943387.1|DV943387 1000142-A07.T7-1 UGI-Reseq Ze... 36 4.6 gi|89251796|gb|DY623582.1|DY623582 ZM_BFb0294P09.f ZM_BFb Zea ma... 36 4.6 gi|89756003|gb|DY686207.1|DY686207 ZM_BFb0274F05.r ZM_BFb Zea ma... 36 4.6 gi|58014115|gb|AY739304.1| Zea mays adenosine 5'-phosphosulfate ... 36 4.6 gi|58014115|gb|AY739304.1| Zea mays adenosine 5'-phosphosulfate ... 36 4.6 gi|90568136|gb|AC183924.1| Zea mays chromosome UNK clone ZMMBBb-... 36 4.6 gi|58082295|gb|AC155433.2| Zea mays strain B73 clone ZMMBBb0250I... 36 4.6 gi|58082219|gb|AC155356.2| Zea mays strain B73 clone ZMMBBb0007N... 36 4.6 gi|55975244|gb|AC152915.1| Zea mays chromosome 4 clone Zea mays ... 36 4.6 >gi|6637057|gb|AW261329.1|AW261329 687077C06.y1 687 - Early embryo from Delaware Zea mays cDNA, mRNA sequence Length = 570 Score = 1130 bits (570), Expect = 0.0 Identities = 570/570 (100%) Strand = Plus / Plus Query: 1 gaggccattttgtgttagcatcagataacatccttgcagcctcagttgtggtcagatcaa 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 gaggccattttgtgttagcatcagataacatccttgcagcctcagttgtggtcagatcaa 60 Query: 61 caattagatcatcactgaagcctgagaggattgttttccatgttattactgataaaaaga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 caattagatcatcactgaagcctgagaggattgttttccatgttattactgataaaaaga 120 Query: 121 cctatcctgccatgcattcatggtttgctttaaattctctcagtcctgctattgttgagg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 cctatcctgccatgcattcatggtttgctttaaattctctcagtcctgctattgttgagg 180 Query: 181 tgaaaggtgttcatcaatttgattggttaacacaagaaaatgttcctgtacttgaatcaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 tgaaaggtgttcatcaatttgattggttaacacaagaaaatgttcctgtacttgaatcaa 240 Query: 241 tagaaactcagcgcgctgccagagatcgttaccatggaagtcgccgcccaataaccagtg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 tagaaactcagcgcgctgccagagatcgttaccatggaagtcgccgcccaataaccagtg 300 Query: 301 ctaatgatagcccaagggtttttgctgccaagcttcaggcaggaagtccaacatatacta 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 ctaatgatagcccaagggtttttgctgccaagcttcaggcaggaagtccaacatatacta 360 Query: 361 atgtgctcaatcatattcgaatatacatgcctgagttgttcccaagcctcaacaaagtcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 atgtgctcaatcatattcgaatatacatgcctgagttgttcccaagcctcaacaaagtcg 420 Query: 421 tatttcttgatgatgatgttgttgtccagcatgacctatcaccactttgggatattgatc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 421 tatttcttgatgatgatgttgttgtccagcatgacctatcaccactttgggatattgatc 480 Query: 481 tatctgggaaggttaatggcgctgttgagacttgcagaggtggagatagttgggtgatgt 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 481 tatctgggaaggttaatggcgctgttgagacttgcagaggtggagatagttgggtgatgt 540 Query: 541 ctaagaggttcaggaattatttaaactttt 570 |||||||||||||||||||||||||||||| Sbjct: 541 ctaagaggttcaggaattatttaaactttt 570 >gi|78076056|gb|DV504490.1|DV504490 ZM_BFb0181G08.r ZM_BFb Zea mays cDNA 5', mRNA sequence Length = 816 Score = 860 bits (434), Expect = 0.0 Identities = 533/566 (94%) Strand = Plus / Plus Query: 5 ccattttgtgttagcatcagataacatccttgcagcctcagttgtggtcagatcaacaat 64 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 164 ccattttgttttagcatcagataacatccttgcagcctcagttgtggtcagatcaacagt 223 Query: 65 tagatcatcactgaagcctgagaggattgttttccatgttattactgataaaaagaccta 124 ||||||||||||||| |||||||| || |||||||||||||||||||| ||||||||||| Sbjct: 224 tagatcatcactgaaacctgagagaatagttttccatgttattactgacaaaaagaccta 283 Query: 125 tcctgccatgcattcatggtttgctttaaattctctcagtcctgctattgttgaggtgaa 184 |||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 284 tcctgccatgcactcatggtttgctttgaattctctcagtcctgctattgttgaggtgaa 343 Query: 185 aggtgttcatcaatttgattggttaacacaagaaaatgttcctgtacttgaatcaataga 244 ||||||||| |||||||||||||| ||| ||||||||||||||||||||||| | ||||| Sbjct: 344 aggtgttcaccaatttgattggttcacaaaagaaaatgttcctgtacttgaagctataga 403 Query: 245 aactcagcgcgctgccagagatcgttaccatggaagtcgccgcccaataaccagtgctaa 304 |||||||||| |||| |||||||||||||||||||||| ||| |||| ||||||||||| Sbjct: 404 aactcagcgcactgctagagatcgttaccatggaagtcaccgtccaagaaccagtgctag 463 Query: 305 tgatagcccaagggtttttgctgccaagcttcaggcaggaagtccaacatatactaatgt 364 ||||||||||||||||||||| |||||||| |||||||||||||||||||| || ||||| Sbjct: 464 tgatagcccaagggtttttgcggccaagctgcaggcaggaagtccaacatacaccaatgt 523 Query: 365 gctcaatcatattcgaatatacatgcctgagttgttcccaagcctcaacaaagtcgtatt 424 ||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||| Sbjct: 524 actcaatcatattcgaatatacttgcctgagttgttcccaagcctcaacaaggtcgtatt 583 Query: 425 tcttgatgatgatgttgttgtccagcatgacctatcaccactttgggatattgatctatc 484 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | Sbjct: 584 tcttgatgatgatgttgttgtccagcatgacctatcaccactttgggatatcgatctagc 643 Query: 485 tgggaaggttaatggcgctgttgagacttgcagaggtggagatagttgggtgatgtctaa 544 ||||||||||||||| |||||||||||||||| ||||||||| ||| ||||||||||||| Sbjct: 644 tgggaaggttaatggtgctgttgagacttgcataggtggagacagtcgggtgatgtctaa 703 Query: 545 gaggttcaggaattatttaaactttt 570 |||||||||||||||||| ||||||| Sbjct: 704 gaggttcaggaattatttcaactttt 729 >gi|14191162|gb|BG833392.1|BG833392 951007E09.x2 951 - BMS tissue from Walbot Lab (GR) Zea mays cDNA, mRNA sequence Length = 529 Score = 775 bits (391), Expect = 0.0 Identities = 469/495 (94%) Strand = Plus / Minus Query: 5 ccattttgtgttagcatcagataacatccttgcagcctcagttgtggtcagatcaacaat 64 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 495 ccattttgttttagcatcagataacatccttgcagcctcagttgtggtcagatcaacagt 436 Query: 65 tagatcatcactgaagcctgagaggattgttttccatgttattactgataaaaagaccta 124 ||||||||||||||| |||||||| || |||||||||||||||||||| ||||||||||| Sbjct: 435 tagatcatcactgaaacctgagagaatagttttccatgttattactgacaaaaagaccta 376 Query: 125 tcctgccatgcattcatggtttgctttaaattctctcagtcctgctattgttgaggtgaa 184 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 375 tcctgccatgcactcatggtttgctttaaattctctcagtcctgctattgttgaggtgaa 316 Query: 185 aggtgttcatcaatttgattggttaacacaagaaaatgttcctgtacttgaatcaataga 244 ||||||||| |||||||||||||| ||| ||||||||||||||||||||||| | ||||| Sbjct: 315 aggtgttcaccaatttgattggttcacaaaagaaaatgttcctgtacttgaagctataga 256 Query: 245 aactcagcgcgctgccagagatcgttaccatggaagtcgccgcccaataaccagtgctaa 304 |||||||||| |||| |||||||||||||||||||||| ||| |||| ||||||||||| Sbjct: 255 aactcagcgcactgctagagatcgttaccatggaagtcaccgtccaagaaccagtgctag 196 Query: 305 tgatagcccaagggtttttgctgccaagcttcaggcaggaagtccaacatatactaatgt 364 ||||||||||||||||||||| |||||||| |||||||||||||||||||| |||||||| Sbjct: 195 tgatagcccaagggtttttgcggccaagctgcaggcaggaagtccaacatacactaatgt 136 Query: 365 gctcaatcatattcgaatatacatgcctgagttgttcccaagcctcaacaaagtcgtatt 424 ||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||| Sbjct: 135 actcaatcatattcgaatatacttgcctgagttgttcccaagcctcaacaaggtcgtatt 76 Query: 425 tcttgatgatgatgttgttgtccagcatgacctatcaccactttgggatattgatctatc 484 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | Sbjct: 75 tcttgatgatgatgttgttgtccagcatgacctatcaccactttgggatatcgatctagc 16 Query: 485 tgggaaggttaatgg 499 ||||||||||||||| Sbjct: 15 tgggaaggttaatgg 1 >gi|21208469|gb|AY105391.1| Zea mays PCO078108 mRNA sequence Length = 789 Score = 769 bits (388), Expect = 0.0 Identities = 388/388 (100%) Strand = Plus / Plus Query: 5 ccattttgtgttagcatcagataacatccttgcagcctcagttgtggtcagatcaacaat 64 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 402 ccattttgtgttagcatcagataacatccttgcagcctcagttgtggtcagatcaacaat 461 Query: 65 tagatcatcactgaagcctgagaggattgttttccatgttattactgataaaaagaccta 124 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 462 tagatcatcactgaagcctgagaggattgttttccatgttattactgataaaaagaccta 521 Query: 125 tcctgccatgcattcatggtttgctttaaattctctcagtcctgctattgttgaggtgaa 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 522 tcctgccatgcattcatggtttgctttaaattctctcagtcctgctattgttgaggtgaa 581 Query: 185 aggtgttcatcaatttgattggttaacacaagaaaatgttcctgtacttgaatcaataga 244 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 582 aggtgttcatcaatttgattggttaacacaagaaaatgttcctgtacttgaatcaataga 641 Query: 245 aactcagcgcgctgccagagatcgttaccatggaagtcgccgcccaataaccagtgctaa 304 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 642 aactcagcgcgctgccagagatcgttaccatggaagtcgccgcccaataaccagtgctaa 701 Query: 305 tgatagcccaagggtttttgctgccaagcttcaggcaggaagtccaacatatactaatgt 364 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 702 tgatagcccaagggtttttgctgccaagcttcaggcaggaagtccaacatatactaatgt 761 Query: 365 gctcaatcatattcgaatatacatgcct 392 |||||||||||||||||||||||||||| Sbjct: 762 gctcaatcatattcgaatatacatgcct 789 >gi|21208469|gb|AY105391.1| Zea mays PCO078108 mRNA sequence Length = 789 Score = 769 bits (388), Expect = 0.0 Identities = 388/388 (100%) Strand = Plus / Plus Query: 5 ccattttgtgttagcatcagataacatccttgcagcctcagttgtggtcagatcaacaat 64 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 402 ccattttgtgttagcatcagataacatccttgcagcctcagttgtggtcagatcaacaat 461 Query: 65 tagatcatcactgaagcctgagaggattgttttccatgttattactgataaaaagaccta 124 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 462 tagatcatcactgaagcctgagaggattgttttccatgttattactgataaaaagaccta 521 Query: 125 tcctgccatgcattcatggtttgctttaaattctctcagtcctgctattgttgaggtgaa 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 522 tcctgccatgcattcatggtttgctttaaattctctcagtcctgctattgttgaggtgaa 581 Query: 185 aggtgttcatcaatttgattggttaacacaagaaaatgttcctgtacttgaatcaataga 244 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 582 aggtgttcatcaatttgattggttaacacaagaaaatgttcctgtacttgaatcaataga 641 Query: 245 aactcagcgcgctgccagagatcgttaccatggaagtcgccgcccaataaccagtgctaa 304 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 642 aactcagcgcgctgccagagatcgttaccatggaagtcgccgcccaataaccagtgctaa 701 Query: 305 tgatagcccaagggtttttgctgccaagcttcaggcaggaagtccaacatatactaatgt 364 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 702 tgatagcccaagggtttttgctgccaagcttcaggcaggaagtccaacatatactaatgt 761 Query: 365 gctcaatcatattcgaatatacatgcct 392 |||||||||||||||||||||||||||| Sbjct: 762 gctcaatcatattcgaatatacatgcct 789 >gi|29129742|gb|CB380446.1|CB380446 3529_1_22_1_B08.y_2 3529 - 2 mm ear tissue from Schmidt and Hake labs Zea mays cDNA, mRNA sequence Length = 295 Score = 163 bits (82), Expect = 3e-38 Identities = 85/86 (98%) Strand = Plus / Plus Query: 5 ccattttgtgttagcatcagataacatccttgcagcctcagttgtggtcagatcaacaat 64 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 210 ccattttgcgttagcatcagataacatccttgcagcctcagttgtggtcagatcaacaat 269 Query: 65 tagatcatcactgaagcctgagagga 90 |||||||||||||||||||||||||| Sbjct: 270 tagatcatcactgaagcctgagagga 295 >gi|76010442|gb|DT937612.1|DT937612 ZM_BFb0117C05.f ZM_BFb Zea mays cDNA 3', mRNA sequence Length = 820 Score = 91.7 bits (46), Expect = 9e-17 Identities = 46/46 (100%) Strand = Plus / Minus Query: 525 gatagttgggtgatgtctaagaggttcaggaattatttaaactttt 570 |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 820 gatagttgggtgatgtctaagaggttcaggaattatttaaactttt 775 >gi|7216542|gb|AW562664.1|AW562664 660068G04.y1 660 - Mixed stages of anther and pollen Zea mays cDNA, mRNA sequence Length = 455 Score = 54.0 bits (27), Expect = 2e-05 Identities = 69/83 (83%) Strand = Plus / Plus Query: 486 gggaaggttaatggcgctgttgagacttgcagaggtggagatagttgggtgatgtctaag 545 |||||||| ||||| ||||| || || |||||||| | ||| || ||||||||||||||| Sbjct: 294 gggaaggtaaatggagctgtcgaaacatgcagaggggaagacagctgggtgatgtctaag 353 Query: 546 aggttcaggaattatttaaactt 568 | ||||||| ||||| ||||| Sbjct: 354 cgtttcaggacatatttcaactt 376 >gi|18170741|gb|BM340581.1|BM340581 MEST324-F10.T3 ISUM5-RN Zea mays cDNA clone MEST324-F10 3', mRNA sequence Length = 674 Score = 54.0 bits (27), Expect = 2e-05 Identities = 69/83 (83%) Strand = Plus / Minus Query: 486 gggaaggttaatggcgctgttgagacttgcagaggtggagatagttgggtgatgtctaag 545 |||||||| ||||| ||||| || || |||||||| | ||| || ||||||||||||||| Sbjct: 323 gggaaggtgaatggagctgtggaaacatgcagaggggaagacagctgggtgatgtctaag 264 Query: 546 aggttcaggaattatttaaactt 568 | ||||||| ||||| ||||| Sbjct: 263 cgtttcaggacatatttcaactt 241 Score = 42.1 bits (21), Expect = 0.075 Identities = 57/69 (82%) Strand = Plus / Minus Query: 164 tcctgctattgttgaggtgaaaggtgttcatcaatttgattggttaacacaagaaaatgt 223 |||||| || ||||| || ||||||||||| || |||| |||| | ||| ||||||||| Sbjct: 645 tcctgcaatagttgaagtaaaaggtgttcaccagtttgcttggctgacaagagaaaatgt 586 Query: 224 tcctgtact 232 ||| ||||| Sbjct: 585 tccggtact 577 >gi|26456626|gb|CA828209.1|CA828209 1114025C08.y4 1114 - Unigene IV from Maize Genome Project Zea mays cDNA, mRNA sequence Length = 638 Score = 54.0 bits (27), Expect = 2e-05 Identities = 69/83 (83%) Strand = Plus / Plus Query: 486 gggaaggttaatggcgctgttgagacttgcagaggtggagatagttgggtgatgtctaag 545 |||||||| ||||| ||||| || || |||||||| | ||| || ||||||||||||||| Sbjct: 83 gggaaggtgaatggagctgtggaaacatgcagaggggaagacagctgggtgatgtctaag 142 Query: 546 aggttcaggaattatttaaactt 568 | ||||||| ||||| ||||| Sbjct: 143 cgtttcaggacatatttcaactt 165 >gi|76286569|gb|DV026137.1|DV026137 ZM_BFb0147A16.r ZM_BFb Zea mays cDNA 5', mRNA sequence Length = 765 Score = 54.0 bits (27), Expect = 2e-05 Identities = 69/83 (83%) Strand = Plus / Plus Query: 486 gggaaggttaatggcgctgttgagacttgcagaggtggagatagttgggtgatgtctaag 545 |||||||| ||||| ||||| || || |||||||| | ||| || ||||||||||||||| Sbjct: 350 gggaaggtaaatggagctgtggaaacatgcagaggggaagacagctgggtgatgtctaag 409 Query: 546 aggttcaggaattatttaaactt 568 | ||||||| ||||| ||||| Sbjct: 410 cgtttcaggacatatttcaactt 432 Score = 50.1 bits (25), Expect = 3e-04 Identities = 58/69 (84%) Strand = Plus / Plus Query: 164 tcctgctattgttgaggtgaaaggtgttcatcaatttgattggttaacacaagaaaatgt 223 |||||| || ||||| || ||||||||||| |||||||| ||| | ||| ||||||||| Sbjct: 28 tcctgcaatagttgaagtaaaaggtgttcaccaatttgactggctgacaagagaaaatgt 87 Query: 224 tcctgtact 232 ||| ||||| Sbjct: 88 tccagtact 96 >gi|78074285|gb|DV502719.1|DV502719 ZM_BFb0174K17.r ZM_BFb Zea mays cDNA 5', mRNA sequence Length = 893 Score = 54.0 bits (27), Expect = 2e-05 Identities = 69/83 (83%) Strand = Plus / Plus Query: 486 gggaaggttaatggcgctgttgagacttgcagaggtggagatagttgggtgatgtctaag 545 |||||||| ||||| ||||| || || |||||||| | ||| || ||||||||||||||| Sbjct: 358 gggaaggtgaatggagctgtggaaacatgcagaggggaagacagctgggtgatgtctaag 417 Query: 546 aggttcaggaattatttaaactt 568 | ||||||| ||||| ||||| Sbjct: 418 cgtttcaggacatatttcaactt 440 Score = 42.1 bits (21), Expect = 0.075 Identities = 81/101 (80%) Strand = Plus / Plus Query: 132 atgcattcatggtttgctttaaattctctcagtcctgctattgttgaggtgaaaggtgtt 191 |||||||||||||||||| | ||||| | |||||| || ||||| || ||||||||| Sbjct: 4 atgcattcatggtttgctcttaattccatagctcctgcaatagttgaagtaaaaggtgtt 63 Query: 192 catcaatttgattggttaacacaagaaaatgttcctgtact 232 || || ||||| ||| | ||| ||||||||| || ||||| Sbjct: 64 caccagtttgactggctgacaagagaaaatgtcccggtact 104 >gi|21209366|gb|AY106288.1| Zea mays PCO089569 mRNA sequence Length = 1052 Score = 54.0 bits (27), Expect = 2e-05 Identities = 69/83 (83%) Strand = Plus / Plus Query: 486 gggaaggttaatggcgctgttgagacttgcagaggtggagatagttgggtgatgtctaag 545 |||||||| ||||| ||||| || || |||||||| | ||| || ||||||||||||||| Sbjct: 49 gggaaggtgaatggagctgtggaaacatgcagaggggaagacagctgggtgatgtctaag 108 Query: 546 aggttcaggaattatttaaactt 568 | ||||||| ||||| ||||| Sbjct: 109 cgtttcaggacatatttcaactt 131 >gi|21209366|gb|AY106288.1| Zea mays PCO089569 mRNA sequence Length = 1052 Score = 54.0 bits (27), Expect = 2e-05 Identities = 69/83 (83%) Strand = Plus / Plus Query: 486 gggaaggttaatggcgctgttgagacttgcagaggtggagatagttgggtgatgtctaag 545 |||||||| ||||| ||||| || || |||||||| | ||| || ||||||||||||||| Sbjct: 49 gggaaggtgaatggagctgtggaaacatgcagaggggaagacagctgggtgatgtctaag 108 Query: 546 aggttcaggaattatttaaactt 568 | ||||||| ||||| ||||| Sbjct: 109 cgtttcaggacatatttcaactt 131 >gi|61119538|gb|DN560499.1|DN560499 ME19-B07-T3-96-R1 E7PCR Zea mays cDNA clone E7PCRME1907B, mRNA sequence Length = 753 Score = 52.0 bits (26), Expect = 8e-05 Identities = 107/134 (79%) Strand = Plus / Plus Query: 99 catgttattactgataaaaagacctatcctgccatgcattcatggtttgctttaaattct 158 ||||||||||| ||||| || || ||||||| |||||||| ||||||||| | ||||| Sbjct: 44 catgttattaccgataagaaaacatatcctgggatgcattcgtggtttgctcttaattcc 103 Query: 159 ctcagtcctgctattgttgaggtgaaaggtgttcatcaatttgattggttaacacaagaa 218 | |||||| || ||||| || ||||||||||| || |||| |||| | ||| | || Sbjct: 104 atagctcctgcaatagttgaagtaaaaggtgttcaccattttgcttggctgacaagaaaa 163 Query: 219 aatgttcctgtact 232 |||||||| ||||| Sbjct: 164 aatgttccggtact 177 Score = 46.1 bits (23), Expect = 0.005 Identities = 68/83 (81%) Strand = Plus / Plus Query: 486 gggaaggttaatggcgctgttgagacttgcagaggtggagatagttgggtgatgtctaag 545 |||||||| ||||| ||||| || || |||| ||| | ||| || ||||||||||||||| Sbjct: 431 gggaaggtgaatggagctgtggaaacatgcaaaggggaagacagctgggtgatgtctaag 490 Query: 546 aggttcaggaattatttaaactt 568 | ||||||| ||||| ||||| Sbjct: 491 cgtttcaggacatatttcaactt 513 >gi|60356225|gb|DN223198.1|DN223198 MEST1139_F04.T7-1 UGA-ZmSAM-XZ2 Zea mays cDNA, mRNA sequence Length = 754 Score = 44.1 bits (22), Expect = 0.019 Identities = 37/42 (88%) Strand = Plus / Plus Query: 420 gtatttcttgatgatgatgttgttgtccagcatgacctatca 461 |||||||||||||||||| | ||||| ||| | ||||||||| Sbjct: 697 gtatttcttgatgatgatatcgttgttcagaaggacctatca 738 >gi|60356870|gb|DN223843.1|DN223843 MEST1148_G10.T7-1 UGA-ZmSAM-XZ2 Zea mays cDNA, mRNA sequence Length = 720 Score = 44.1 bits (22), Expect = 0.019 Identities = 25/26 (96%) Strand = Plus / Plus Query: 420 gtatttcttgatgatgatgttgttgt 445 |||||||||||||||||| ||||||| Sbjct: 299 gtatttcttgatgatgatattgttgt 324 >gi|62550399|gb|DN830819.1|DN830819 EST7032 Zea mays embryo sac cDNA library Zea mays cDNA clone ES15225 5' similar to glycosyltransferase protein, mRNA sequence Length = 760 Score = 44.1 bits (22), Expect = 0.019 Identities = 37/42 (88%) Strand = Plus / Plus Query: 420 gtatttcttgatgatgatgttgttgtccagcatgacctatca 461 |||||||||||||||||| | ||||| ||| | ||||||||| Sbjct: 200 gtatttcttgatgatgatatcgttgttcagaaggacctatca 241 >gi|89760316|gb|DY688779.1|DY688779 ZM_BFb0284C12.r ZM_BFb Zea mays cDNA 5', mRNA sequence Length = 802 Score = 44.1 bits (22), Expect = 0.019 Identities = 37/42 (88%) Strand = Plus / Plus Query: 420 gtatttcttgatgatgatgttgttgtccagcatgacctatca 461 |||||||||||||||||| | ||||| ||| | ||||||||| Sbjct: 362 gtatttcttgatgatgatatcgttgttcagaaggacctatca 403 >gi|89257786|gb|AC177908.2| Zea mays chromosome UNK clone CH201-155K9; ZMMBBc0155K09, *** SEQUENCING IN PROGRESS ***, 13 unordered pieces Length = 181837 Score = 40.1 bits (20), Expect = 0.30 Identities = 20/20 (100%) Strand = Plus / Minus Query: 423 tttcttgatgatgatgttgt 442 |||||||||||||||||||| Sbjct: 146525 tttcttgatgatgatgttgt 146506 >gi|13515967|gb|BG518243.1|BG518243 947069C05.y2 947 - 2 week shoot from Barkan lab Zea mays cDNA, mRNA sequence Length = 447 Score = 38.2 bits (19), Expect = 1.2 Identities = 43/51 (84%) Strand = Plus / Plus Query: 99 catgttattactgataaaaagacctatcctgccatgcattcatggtttgct 149 ||||||||||| ||||| || || ||||||| |||||||| |||||||| Sbjct: 373 catgttattaccgataagaaaacatatcctgggatgcattcgcggtttgct 423 >gi|45567905|gb|CK985805.1|CK985805 zmrsub1_0B10-010-b12.s0 zmrsub1 Zea mays cDNA 3', mRNA sequence Length = 477 Score = 38.2 bits (19), Expect = 1.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 427 ttgatgatgatgttgttgt 445 ||||||||||||||||||| Sbjct: 285 ttgatgatgatgttgttgt 303 >gi|71436445|gb|DR817495.1|DR817495 ZM_BFb0050O12.r ZM_BFb Zea mays cDNA 5', mRNA sequence Length = 700 Score = 36.2 bits (18), Expect = 4.6 Identities = 18/18 (100%) Strand = Plus / Plus Query: 434 tgatgttgttgtccagca 451 |||||||||||||||||| Sbjct: 616 tgatgttgttgtccagca 633 >gi|74237572|gb|DT645486.1|DT645486 ZM_BFb0105I13.r ZM_BFb Zea mays cDNA 5', mRNA sequence Length = 810 Score = 36.2 bits (18), Expect = 4.6 Identities = 18/18 (100%) Strand = Plus / Plus Query: 434 tgatgttgttgtccagca 451 |||||||||||||||||| Sbjct: 589 tgatgttgttgtccagca 606 >gi|76018202|gb|DT945372.1|DT945372 ZM_BFb0132I23.f ZM_BFb Zea mays cDNA 3', mRNA sequence Length = 651 Score = 36.2 bits (18), Expect = 4.6 Identities = 18/18 (100%) Strand = Plus / Minus Query: 434 tgatgttgttgtccagca 451 |||||||||||||||||| Sbjct: 608 tgatgttgttgtccagca 591 >gi|76018203|gb|DT945373.1|DT945373 ZM_BFb0132I23.r ZM_BFb Zea mays cDNA 5', mRNA sequence Length = 786 Score = 36.2 bits (18), Expect = 4.6 Identities = 18/18 (100%) Strand = Plus / Plus Query: 434 tgatgttgttgtccagca 451 |||||||||||||||||| Sbjct: 700 tgatgttgttgtccagca 717 >gi|83279379|gb|DV943387.1|DV943387 1000142-A07.T7-1 UGI-Reseq Zea mays cDNA, mRNA sequence Length = 216 Score = 36.2 bits (18), Expect = 4.6 Identities = 18/18 (100%) Strand = Plus / Plus Query: 420 gtatttcttgatgatgat 437 |||||||||||||||||| Sbjct: 4 gtatttcttgatgatgat 21 >gi|89251796|gb|DY623582.1|DY623582 ZM_BFb0294P09.f ZM_BFb Zea mays cDNA 3', mRNA sequence Length = 739 Score = 36.2 bits (18), Expect = 4.6 Identities = 18/18 (100%) Strand = Plus / Minus Query: 434 tgatgttgttgtccagca 451 |||||||||||||||||| Sbjct: 590 tgatgttgttgtccagca 573 >gi|89756003|gb|DY686207.1|DY686207 ZM_BFb0274F05.r ZM_BFb Zea mays cDNA 5', mRNA sequence Length = 709 Score = 36.2 bits (18), Expect = 4.6 Identities = 18/18 (100%) Strand = Plus / Plus Query: 434 tgatgttgttgtccagca 451 |||||||||||||||||| Sbjct: 616 tgatgttgttgtccagca 633 >gi|58014115|gb|AY739304.1| Zea mays adenosine 5'-phosphosulfate reductase 9 (APRL9) mRNA, complete cds Length = 1207 Score = 36.2 bits (18), Expect = 4.6 Identities = 18/18 (100%) Strand = Plus / Plus Query: 434 tgatgttgttgtccagca 451 |||||||||||||||||| Sbjct: 598 tgatgttgttgtccagca 615 >gi|58014115|gb|AY739304.1| Zea mays adenosine 5'-phosphosulfate reductase 9 (APRL9) mRNA, complete cds Length = 1207 Score = 36.2 bits (18), Expect = 4.6 Identities = 18/18 (100%) Strand = Plus / Plus Query: 434 tgatgttgttgtccagca 451 |||||||||||||||||| Sbjct: 598 tgatgttgttgtccagca 615 >gi|90568136|gb|AC183924.1| Zea mays chromosome UNK clone ZMMBBb-566G7; ZMMBBb0566G07, *** SEQUENCING IN PROGRESS ***, 20 unordered pieces Length = 104746 Score = 36.2 bits (18), Expect = 4.6 Identities = 18/18 (100%) Strand = Plus / Plus Query: 361 atgtgctcaatcatattc 378 |||||||||||||||||| Sbjct: 7549 atgtgctcaatcatattc 7566 >gi|58082295|gb|AC155433.2| Zea mays strain B73 clone ZMMBBb0250I08, *** SEQUENCING IN PROGRESS ***, 12 unordered pieces Length = 110753 Score = 36.2 bits (18), Expect = 4.6 Identities = 18/18 (100%) Strand = Plus / Plus Query: 434 tgatgttgttgtccagca 451 |||||||||||||||||| Sbjct: 16361 tgatgttgttgtccagca 16378 >gi|58082219|gb|AC155356.2| Zea mays strain B73 clone ZMMBBb0007N24, *** SEQUENCING IN PROGRESS ***, 31 unordered pieces Length = 158723 Score = 36.2 bits (18), Expect = 4.6 Identities = 18/18 (100%) Strand = Plus / Plus Query: 428 tgatgatgatgttgttgt 445 |||||||||||||||||| Sbjct: 25393 tgatgatgatgttgttgt 25410 >gi|55975244|gb|AC152915.1| Zea mays chromosome 4 clone Zea mays BAC clone Z347N19, *** SEQUENCING IN PROGRESS ***, 6 unordered pieces Length = 167152 Score = 36.2 bits (18), Expect = 4.6 Identities = 18/18 (100%) Strand = Plus / Plus Query: 428 tgatgatgatgttgttgt 445 |||||||||||||||||| Sbjct: 19518 tgatgatgatgttgttgt 19535 Database: mais_NCBI.fasta Posted date: Apr 26, 2006 11:51 AM Number of letters in database: 669,372,029 Number of sequences in database: 836,351 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 194,722 Number of Sequences: 836351 Number of extensions: 194722 Number of successful extensions: 15431 Number of sequences better than 10.0: 35 Number of HSP's better than 10.0 without gapping: 35 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 15369 Number of HSP's gapped (non-prelim): 60 length of query: 570 length of database: 669,372,029 effective HSP length: 19 effective length of query: 551 effective length of database: 653,481,360 effective search space: 360068229360 effective search space used: 360068229360 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 18 (36.2 bits)