BLASTN 2.2.6 [Apr-09-2003] BLASTN 2.2.6 [Apr-09-2003] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= 3148257.2.1 (675 letters) Database: mais_NCBI.fasta 836,351 sequences; 669,372,029 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|6056448|gb|AW090958.1|AW090958 614067C11.y1 614 - root cDNA l... 1338 0.0 gi|21215540|gb|AY110950.1| Zea mays CL40034_1 mRNA sequence 1330 0.0 gi|21215540|gb|AY110950.1| Zea mays CL40034_1 mRNA sequence 1330 0.0 gi|5871659|gb|AW018130.1|AW018130 614067C11.x1 614 - root cDNA l... 1102 0.0 gi|12968766|gb|BG265712.1|BG265712 1000034H07.x1 1000 - Unigene ... 862 0.0 gi|78023220|gb|DV491607.1|DV491607 1000034-H07.T7-1 UGI-Reseq Ze... 547 e-154 gi|89763915|gb|DY690909.1|DY690909 ZM_BFb0290G18.f ZM_BFb Zea ma... 212 4e-53 gi|57790143|gb|AC149822.2| Zea mays clone ZMMBBb0581M09, *** SEQ... 135 8e-30 gi|92901197|gb|AC185483.1| Zea mays chromosome UNK clone CH201-1... 127 2e-27 gi|57790150|gb|AC149828.2| Zea mays clone ZMMBBc0127E02, *** SEQ... 127 2e-27 gi|91982794|gb|AC185250.1| Zea mays chromosome UNK clone CH201-5... 121 1e-25 gi|9731505|gb|BE510257.1|BE510257 946051B04.y1 946 - tassel prim... 42 0.090 gi|9732768|gb|BE511520.1|BE511520 946061D06.y1 946 - tassel prim... 42 0.090 gi|27575927|gb|CA998621.1|CA998621 3529_1_12_1_C11.y_1 3529 - 2 ... 42 0.090 gi|6031393|gb|AW076295.1|AW076295 614065B11.y1 614 - root cDNA l... 40 0.35 gi|6637032|gb|AW261304.1|AW261304 687076G06.y1 687 - Early embry... 40 0.35 gi|31998534|gb|CD662123.1|CD662123 3529_1_140_1_D10.y_1 3529 - 2... 40 0.35 gi|6564119|gb|AW231741.1|AW231741 687023F10.y2 687 - Early embry... 38 1.4 gi|9732002|gb|BE510754.1|BE510754 946055C02.x1 946 - tassel prim... 38 1.4 gi|9732175|gb|BE510927.1|BE510927 946056E05.y1 946 - tassel prim... 38 1.4 gi|29130808|gb|CB381512.1|CB381512 3529_1_47_1_G08.y_1 3529 - 2 ... 38 1.4 gi|21216630|gb|AY112040.1| Zea mays CL19964_1 mRNA sequence 38 1.4 gi|21216630|gb|AY112040.1| Zea mays CL19964_1 mRNA sequence 38 1.4 gi|5740564|gb|AI948254.1|AI948254 603039C04.x1 603 - stressed ro... 36 5.5 gi|5895560|gb|AW036806.1|AW036806 614019A10.y2 614 - root cDNA l... 36 5.5 gi|6021360|gb|AW066288.1|AW066288 687009B03.y1 687 - Early embry... 36 5.5 gi|6021435|gb|AW066363.1|AW066363 687001D01.y1 687 - Early embry... 36 5.5 gi|6536542|gb|AW224855.1|AW224855 687044D05.y1 687 - Early embry... 36 5.5 gi|6536582|gb|AW224895.1|AW224895 687047B06.y1 687 - Early embry... 36 5.5 gi|6564090|gb|AW231712.1|AW231712 687023B11.y2 687 - Early embry... 36 5.5 gi|6626394|gb|AW257926.1|AW257926 687064C06.y1 687 - Early embry... 36 5.5 gi|6626579|gb|AW258111.1|AW258111 687068F02.y1 687 - Early embry... 36 5.5 gi|8516636|gb|BE123361.1|BE123361 946001A12.X3 946 - tassel prim... 36 5.5 gi|8665796|gb|BE186612.1|BE186612 946009C08.X1 946 - tassel prim... 36 5.5 gi|9028762|gb|BE238802.1|BE238802 946009C08.y1 946 - tassel prim... 36 5.5 gi|9254684|gb|BE345152.1|BE345152 946032E08.y1 946 - tassel prim... 36 5.5 gi|9254824|gb|BE345292.1|BE345292 946032H06.x1 946 - tassel prim... 36 5.5 gi|9461869|gb|BE453945.1|BE453945 946048D08.x1 946 - tassel prim... 36 5.5 gi|9566263|gb|BE475772.1|BE475772 946048D08.x2 946 - tassel prim... 36 5.5 gi|9566296|gb|BE475805.1|BE475805 946048F06.x2 946 - tassel prim... 36 5.5 gi|9732003|gb|BE510755.1|BE510755 946055C02.y1 946 - tassel prim... 36 5.5 gi|9742701|gb|BE518849.1|BE518849 946076H12.x1 946 - tassel prim... 36 5.5 gi|9794667|gb|BE552975.1|BE552975 946088A09.y1 946 - tassel prim... 36 5.5 gi|9825057|gb|BE575259.1|BE575259 946093B12.y1 946 - tassel prim... 36 5.5 gi|9952895|gb|BE639478.1|BE639478 946033D08.x2 946 - tassel prim... 36 5.5 gi|9953106|gb|BE639689.1|BE639689 946037C10.y1 946 - tassel prim... 36 5.5 gi|9953301|gb|BE639884.1|BE639884 946043C08.x1 946 - tassel prim... 36 5.5 gi|18177596|gb|BM378806.1|BM378806 MEST569-F02.univ ISUM7 Zea ma... 36 5.5 gi|24763200|gb|CA398381.1|CA398381 EL01N0302H09.g Endosperm_3 Ze... 36 5.5 gi|26557306|gb|CA829541.1|CA829541 3529_1_6_1_D11.y_1 3529 - 2 m... 36 5.5 gi|27575928|gb|CA998622.1|CA998622 3529_1_12_1_C12.y_1 3529 - 2 ... 36 5.5 gi|27575943|gb|CA998637.1|CA998637 3529_1_12_1_E06.y_1 3529 - 2 ... 36 5.5 gi|28909519|gb|CB330970.1|CB330970 3529_1_25_1_E06.y_1 3529 - 2 ... 36 5.5 gi|28930805|gb|CB334166.1|CB334166 3529_1_21_1_B03.y_2 3529 - 2 ... 36 5.5 gi|29130865|gb|CB381569.1|CB381569 3529_1_51_1_D04.y_1 3529 - 2 ... 36 5.5 gi|31350278|gb|CD434635.1|CD434635 EL01N0326D02.b Endosperm_3 Ze... 36 5.5 gi|31350537|gb|CD434894.1|CD434894 EL01N0330A03.b Endosperm_3 Ze... 36 5.5 gi|31363400|gb|CD447757.1|CD447757 EL01N0203G08.g Endosperm_2 Ze... 36 5.5 gi|31363794|gb|CD448149.1|CD448149 EK07D2303C11.g Endosperm_6 Ze... 36 5.5 gi|31363810|gb|CD448165.1|CD448165 EK07D2303E05.g Endosperm_6 Ze... 36 5.5 gi|31364414|gb|CD448769.1|CD448769 EK07D2309C10.b Endosperm_6 Ze... 36 5.5 gi|31558327|gb|CD527539.1|CD527539 3529_1_121_1_B05.y_1 3529 - 2... 36 5.5 gi|31909259|gb|CD650829.1|CD650829 3529_1_132_1_B05.y_2 3529 - 2... 36 5.5 gi|31910495|gb|CD651452.1|CD651452 3529_1_133_1_C02.y_1 3529 - 2... 36 5.5 gi|32165083|gb|CD670401.1|CD670401 3529_1_137_1_D10.x_1 3529 - 2... 36 5.5 gi|60291797|gb|DN190036.1|DN190036 MEST700-G08.T7-1 UGA-ZmSAM-XZ... 36 5.5 gi|74245363|gb|DT653277.1|DT653277 ZM_BFb0124H13.r ZM_BFb Zea ma... 36 5.5 gi|76019734|gb|DT946904.1|DT946904 ZM_BFb0134M21.r ZM_BFb Zea ma... 36 5.5 gi|78082408|gb|DV510820.1|DV510820 ZM_BFb0190K17.r ZM_BFb Zea ma... 36 5.5 gi|78120087|gb|DV538471.1|DV538471 ZM_BFb0231O14.r ZM_BFb Zea ma... 36 5.5 gi|21209503|gb|AY106425.1| Zea mays PCO122672 mRNA sequence 36 5.5 gi|21214061|gb|AY110007.1| Zea mays CL4742_1 mRNA sequence 36 5.5 gi|21216379|gb|AY111789.1| Zea mays CL3071_3 mRNA sequence 36 5.5 gi|21216379|gb|AY111789.1| Zea mays CL3071_3 mRNA sequence 36 5.5 gi|21214061|gb|AY110007.1| Zea mays CL4742_1 mRNA sequence 36 5.5 gi|21209503|gb|AY106425.1| Zea mays PCO122672 mRNA sequence 36 5.5 gi|58082444|gb|AC155585.2| Zea mays strain B73 clone ZMMBBc0197G... 36 5.5 >gi|6056448|gb|AW090958.1|AW090958 614067C11.y1 614 - root cDNA library from Walbot Lab Zea mays cDNA, mRNA sequence Length = 675 Score = 1338 bits (675), Expect = 0.0 Identities = 675/675 (100%) Strand = Plus / Plus Query: 1 gaattcggcacgaggctcgagacaagtatgccgcaaagcagcacctttactaccgggttg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 gaattcggcacgaggctcgagacaagtatgccgcaaagcagcacctttactaccgggttg 60 Query: 61 ttcaaactgctgtcatcactcttgtagtgctagtgctggttttgtttctgaagttcacgg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 ttcaaactgctgtcatcactcttgtagtgctagtgctggttttgtttctgaagttcacgg 120 Query: 121 aatttcaaatcattgacatcttcactagtcttttggcatttattcctactggttggggct 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 aatttcaaatcattgacatcttcactagtcttttggcatttattcctactggttggggct 180 Query: 181 tgatttcgatcgctcaagtaattcggccattcatcgaatccactgtggtctgggacagta 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 tgatttcgatcgctcaagtaattcggccattcatcgaatccactgtggtctgggacagta 240 Query: 241 ttatttctgtggctcgtttgtatgagatactgcttggagtgttcattatggcaccagttg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 ttatttctgtggctcgtttgtatgagatactgcttggagtgttcattatggcaccagttg 300 Query: 301 cattgctgtcctggttgccgggatttcaagaaatgcagacaagggtacttttcaatgaag 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 cattgctgtcctggttgccgggatttcaagaaatgcagacaagggtacttttcaatgaag 360 Query: 361 gttttagcaggggcctccagatatcccgtattcttactgggaaaagaacaaatacagttt 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 gttttagcaggggcctccagatatcccgtattcttactgggaaaagaacaaatacagttt 420 Query: 421 gaggttctgacccagattgtcgcggcggtgaagcagcggtgctctatctcctatgtacag 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 421 gaggttctgacccagattgtcgcggcggtgaagcagcggtgctctatctcctatgtacag 480 Query: 481 cttagcaattcagtgtggaagggctttgtgcttactgatatagcttagatccatattgaa 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 481 cttagcaattcagtgtggaagggctttgtgcttactgatatagcttagatccatattgaa 540 Query: 541 ctcttccagtagcttttatagctatctagtttaggagtccagatttgtgattttggcaat 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 541 ctcttccagtagcttttatagctatctagtttaggagtccagatttgtgattttggcaat 600 Query: 601 ttaggtattcagttcttttgtacattggttgagctagttgtgtgtagctgattctattgc 660 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 601 ttaggtattcagttcttttgtacattggttgagctagttgtgtgtagctgattctattgc 660 Query: 661 agcaccaccggtgag 675 ||||||||||||||| Sbjct: 661 agcaccaccggtgag 675 >gi|21215540|gb|AY110950.1| Zea mays CL40034_1 mRNA sequence Length = 691 Score = 1330 bits (671), Expect = 0.0 Identities = 674/675 (99%) Strand = Plus / Minus Query: 1 gaattcggcacgaggctcgagacaagtatgccgcaaagcagcacctttactaccgggttg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 675 gaattcggcacgaggctcgagacaagtatgccgcaaagcagcacctttactaccgggttg 616 Query: 61 ttcaaactgctgtcatcactcttgtagtgctagtgctggttttgtttctgaagttcacgg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 615 ttcaaactgctgtcatcactcttgtagtgctagtgctggttttgtttctgaagttcacgg 556 Query: 121 aatttcaaatcattgacatcttcactagtcttttggcatttattcctactggttggggct 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 555 aatttcaaatcattgacatcttcactagtcttttggcatttattcctactggttggggct 496 Query: 181 tgatttcgatcgctcaagtaattcggccattcatcgaatccactgtggtctgggacagta 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 495 tgatttcgatcgctcaagtaattcggccattcatcgaatccactgtggtctgggacagta 436 Query: 241 ttatttctgtggctcgtttgtatgagatactgcttggagtgttcattatggcaccagttg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 435 ttatttctgtggctcgtttgtatgagatactgcttggagtgttcattatggccccagttg 376 Query: 301 cattgctgtcctggttgccgggatttcaagaaatgcagacaagggtacttttcaatgaag 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 375 cattgctgtcctggttgccgggatttcaagaaatgcagacaagggtacttttcaatgaag 316 Query: 361 gttttagcaggggcctccagatatcccgtattcttactgggaaaagaacaaatacagttt 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 315 gttttagcaggggcctccagatatcccgtattcttactgggaaaagaacaaatacagttt 256 Query: 421 gaggttctgacccagattgtcgcggcggtgaagcagcggtgctctatctcctatgtacag 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 255 gaggttctgacccagattgtcgcggcggtgaagcagcggtgctctatctcctatgtacag 196 Query: 481 cttagcaattcagtgtggaagggctttgtgcttactgatatagcttagatccatattgaa 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 195 cttagcaattcagtgtggaagggctttgtgcttactgatatagcttagatccatattgaa 136 Query: 541 ctcttccagtagcttttatagctatctagtttaggagtccagatttgtgattttggcaat 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135 ctcttccagtagcttttatagctatctagtttaggagtccagatttgtgattttggcaat 76 Query: 601 ttaggtattcagttcttttgtacattggttgagctagttgtgtgtagctgattctattgc 660 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75 ttaggtattcagttcttttgtacattggttgagctagttgtgtgtagctgattctattgc 16 Query: 661 agcaccaccggtgag 675 ||||||||||||||| Sbjct: 15 agcaccaccggtgag 1 >gi|21215540|gb|AY110950.1| Zea mays CL40034_1 mRNA sequence Length = 691 Score = 1330 bits (671), Expect = 0.0 Identities = 674/675 (99%) Strand = Plus / Minus Query: 1 gaattcggcacgaggctcgagacaagtatgccgcaaagcagcacctttactaccgggttg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 675 gaattcggcacgaggctcgagacaagtatgccgcaaagcagcacctttactaccgggttg 616 Query: 61 ttcaaactgctgtcatcactcttgtagtgctagtgctggttttgtttctgaagttcacgg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 615 ttcaaactgctgtcatcactcttgtagtgctagtgctggttttgtttctgaagttcacgg 556 Query: 121 aatttcaaatcattgacatcttcactagtcttttggcatttattcctactggttggggct 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 555 aatttcaaatcattgacatcttcactagtcttttggcatttattcctactggttggggct 496 Query: 181 tgatttcgatcgctcaagtaattcggccattcatcgaatccactgtggtctgggacagta 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 495 tgatttcgatcgctcaagtaattcggccattcatcgaatccactgtggtctgggacagta 436 Query: 241 ttatttctgtggctcgtttgtatgagatactgcttggagtgttcattatggcaccagttg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 435 ttatttctgtggctcgtttgtatgagatactgcttggagtgttcattatggccccagttg 376 Query: 301 cattgctgtcctggttgccgggatttcaagaaatgcagacaagggtacttttcaatgaag 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 375 cattgctgtcctggttgccgggatttcaagaaatgcagacaagggtacttttcaatgaag 316 Query: 361 gttttagcaggggcctccagatatcccgtattcttactgggaaaagaacaaatacagttt 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 315 gttttagcaggggcctccagatatcccgtattcttactgggaaaagaacaaatacagttt 256 Query: 421 gaggttctgacccagattgtcgcggcggtgaagcagcggtgctctatctcctatgtacag 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 255 gaggttctgacccagattgtcgcggcggtgaagcagcggtgctctatctcctatgtacag 196 Query: 481 cttagcaattcagtgtggaagggctttgtgcttactgatatagcttagatccatattgaa 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 195 cttagcaattcagtgtggaagggctttgtgcttactgatatagcttagatccatattgaa 136 Query: 541 ctcttccagtagcttttatagctatctagtttaggagtccagatttgtgattttggcaat 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135 ctcttccagtagcttttatagctatctagtttaggagtccagatttgtgattttggcaat 76 Query: 601 ttaggtattcagttcttttgtacattggttgagctagttgtgtgtagctgattctattgc 660 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75 ttaggtattcagttcttttgtacattggttgagctagttgtgtgtagctgattctattgc 16 Query: 661 agcaccaccggtgag 675 ||||||||||||||| Sbjct: 15 agcaccaccggtgag 1 >gi|5871659|gb|AW018130.1|AW018130 614067C11.x1 614 - root cDNA library from Walbot Lab Zea mays cDNA, mRNA sequence Length = 576 Score = 1102 bits (556), Expect = 0.0 Identities = 565/568 (99%) Strand = Plus / Minus Query: 53 ccgggttgttcaaactgctgtcatcactcttgtagtgctagtgctggttttgtttctgaa 112 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 568 ccgggttgttcaaactgctgtcatcactcttgtagtgctagtgctggttttgtttctgaa 509 Query: 113 gttcacggaatttcaaatcattgacatcttcactagtcttttggcatttattcctactgg 172 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 508 gttcacggaatttcaaatcattgacatcttcactagtcttttggcatttattcctactgg 449 Query: 173 ttggggcttgatttcgatcgctcaagtaattcggccattcatcgaatccactgtggtctg 232 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 448 ttggggcttgatttcgatcgctcaagtaattcggccattcatcgaatccactgtggtctg 389 Query: 233 ggacagtattatttctgtggctcgtttgtatgagatactgcttggagtgttcattatggc 292 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 388 ggacagtattatttctgtggctcgtttgtatgagatactgcttggagtgttcattatggc 329 Query: 293 accagttgcattgctgtcctggttgccgggatttcaagaaatgcagacaagggtactttt 352 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 328 cccagttgcattgctgtcctggttgccgggatttcaagaaatgcagacaagggtactttt 269 Query: 353 caatgaaggttttagcaggggcctccagatatcccgtattcttactgggaaaagaacaaa 412 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 268 caatgaaggttttagcaggggcctccagatatcccgtattcttactgggaaaagaacaaa 209 Query: 413 tacagtttgaggttctgacccagattgtcgcggcggtgaagcagcggtgctctatctcct 472 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 208 tacagtttgaggttctgacccagattgtcgcggcggtgaagcagcggtgctctatctcct 149 Query: 473 atgtacagcttagcaattcagtgtggaagggctttgtgcttactgatatagcttagatcc 532 ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 148 atgtacagcaaagcaattcagtgtggaagggctttgtgcttactgatatagcttagatcc 89 Query: 533 atattgaactcttccagtagcttttatagctatctagtttaggagtccagatttgtgatt 592 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 88 atattgaactcttccagtagcttttatagctatctagtttaggagtccagatttgtgatt 29 Query: 593 ttggcaatttaggtattcagttcttttg 620 |||||||||||||||||||||||||||| Sbjct: 28 ttggcaatttaggtattcagttcttttg 1 >gi|12968766|gb|BG265712.1|BG265712 1000034H07.x1 1000 - Unigene I from Maize Genome Project Zea mays cDNA, mRNA sequence Length = 475 Score = 862 bits (435), Expect = 0.0 Identities = 467/475 (98%), Gaps = 2/475 (0%) Strand = Plus / Minus Query: 171 ggttggggcttgatttcgatcgctcaagtaattcggccattcatcgaatccactgtggtc 230 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 475 ggttggggcttgatttcgatcgctcaagtaattcggccattcatcgaatccactgtggtc 416 Query: 231 tgggacagtattatttctgtggctcgtttgtatgagatactgcttggagtgttcattatg 290 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 415 tgggacagtattatttctgtggctcgtttgtatgagatactgcttggagtgttcattatg 356 Query: 291 gcaccagttgcattgctgtcctggttgccgggatttcaagaaatgcagacaagggtactt 350 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||| Sbjct: 355 gcaccagttgcattgctgtcctggttgccgggatttcaaggaatgcagacaagggtgctt 296 Query: 351 ttcaatgaaggttttagcaggggcctccagatatcccgtattcttactgggaaaagaaca 410 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 295 ttcaatgaaggttttagcaggggcctccagatatcccgtattcttactgggaaaagaaca 236 Query: 411 aatacagtttgaggttctgacccagattgtcgcggcggtgaagcagcggtgctctatct- 469 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 235 aatacagtttgaggttctgacccagattgtcgcggcggtgaagcagcggtgctctatata 176 Query: 470 cctatgtacagcttagcaattcagtgtggaagggctttgtgcttactgatatagcttaga 529 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 175 aataagtacagcttagcaattcagtgtggaagggctttgtgcttactgatatagcttaga 116 Query: 530 tcca-tattgaactcttccagtagcttttatagctatctagtttaggagtccagatttgt 588 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 115 tccagtattgaactcttccagtagcttttatagctatctagtttaggagtccagatttgt 56 Query: 589 gattttggcaatttaggtattcagttcttttgtacattggttgagctagttgtgt 643 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 55 gattttggcaatttaggtattcagttcttttgtacattggttgagctagttgtgt 1 >gi|78023220|gb|DV491607.1|DV491607 1000034-H07.T7-1 UGI-Reseq Zea mays cDNA, mRNA sequence Length = 288 Score = 547 bits (276), Expect = e-154 Identities = 285/288 (98%) Strand = Plus / Minus Query: 293 accagttgcattgctgtcctggttgccgggatttcaagaaatgcagacaagggtactttt 352 ||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||| Sbjct: 288 accagttgcattgctgttctggttgccgggatttcaggaaatgcagacaagggtactttt 229 Query: 353 caatgaaggttttagcaggggcctccagatatcccgtattcttactgggaaaagaacaaa 412 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 228 caatgaaggttttagcaggggcctccagatatcccgtatttttactgggaaaagaacaaa 169 Query: 413 tacagtttgaggttctgacccagattgtcgcggcggtgaagcagcggtgctctatctcct 472 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 168 tacagtttgaggttctgacccagattgtcgcggcggtgaagcagcggtgctctatctcct 109 Query: 473 atgtacagcttagcaattcagtgtggaagggctttgtgcttactgatatagcttagatcc 532 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 108 atgtacagcttagcaattcagtgtggaagggctttgtgcttactgatatagcttagatcc 49 Query: 533 atattgaactcttccagtagcttttatagctatctagtttaggagtcc 580 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 48 atattgaactcttccagtagcttttatagctatctagtttaggagtcc 1 >gi|89763915|gb|DY690909.1|DY690909 ZM_BFb0290G18.f ZM_BFb Zea mays cDNA 3', mRNA sequence Length = 668 Score = 212 bits (107), Expect = 4e-53 Identities = 107/107 (100%) Strand = Plus / Minus Query: 15 gctcgagacaagtatgccgcaaagcagcacctttactaccgggttgttcaaactgctgtc 74 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 282 gctcgagacaagtatgccgcaaagcagcacctttactaccgggttgttcaaactgctgtc 223 Query: 75 atcactcttgtagtgctagtgctggttttgtttctgaagttcacgga 121 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 222 atcactcttgtagtgctagtgctggttttgtttctgaagttcacgga 176 Score = 196 bits (99), Expect = 3e-48 Identities = 99/99 (100%) Strand = Plus / Minus Query: 15 gctcgagacaagtatgccgcaaagcagcacctttactaccgggttgttcaaactgctgtc 74 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131 gctcgagacaagtatgccgcaaagcagcacctttactaccgggttgttcaaactgctgtc 72 Query: 75 atcactcttgtagtgctagtgctggttttgtttctgaag 113 ||||||||||||||||||||||||||||||||||||||| Sbjct: 71 atcactcttgtagtgctagtgctggttttgtttctgaag 33 Score = 73.8 bits (37), Expect = 3e-11 Identities = 37/37 (100%) Strand = Plus / Plus Query: 108 ctgaagttcacggaatttcaaatcattgacatcttca 144 ||||||||||||||||||||||||||||||||||||| Sbjct: 1 ctgaagttcacggaatttcaaatcattgacatcttca 37 >gi|57790143|gb|AC149822.2| Zea mays clone ZMMBBb0581M09, *** SEQUENCING IN PROGRESS ***, 3 ordered pieces Length = 114154 Score = 135 bits (68), Expect = 8e-30 Identities = 129/150 (86%), Gaps = 7/150 (4%) Strand = Plus / Plus Query: 283 tcattatggcaccagttgcattgctgtcctggttgccgggatttcaagaaatgcagacaa 342 |||||||||||||| |||||||||| ||||||||||||| ||||||||||| |||||||| Sbjct: 79190 tcattatggcaccaattgcattgctatcctggttgccggtatttcaagaaacgcagacaa 79249 Query: 343 gggtacttttcaatgaaggttttagcaggggcc-------tccagatatcccgtattctt 395 || |||||||||||||| ||| || ||||||| |||||||||| | ||||||| Sbjct: 79250 ggacacttttcaatgaagatttcagaaggggcctcctaagtccagatatctcatattctt 79309 Query: 396 actgggaaaagaacaaatacagtttgaggt 425 ||||||||||||| |||| |||||||||| Sbjct: 79310 actgggaaaagaatgaatatagtttgaggt 79339 >gi|92901197|gb|AC185483.1| Zea mays chromosome UNK clone CH201-191K20; ZMMBBc0191K20, *** SEQUENCING IN PROGRESS ***, 21 unordered pieces Length = 174363 Score = 127 bits (64), Expect = 2e-27 Identities = 119/136 (87%), Gaps = 1/136 (0%) Strand = Plus / Minus Query: 280 tgttcattatggcaccagttgcattgctgtcctggttgccgggatttcaagaaatgcaga 339 ||||||||||||||||| ||||| | ||||||| ||| ||||||||||||||||| ||| Sbjct: 33672 tgttcattatggcaccaattgcaattttgtcctg-ttgtcgggatttcaagaaatgtaga 33614 Query: 340 caagggtacttttcaatgaaggttttagcaggggcctccagatatcccgtattcttactg 399 ||| |||| |||||||||||||||| | ||||||||| ||||||| ||||||||||| Sbjct: 33613 caatggtagttttcaatgaaggtttcaataggggcctctagatatcatgtattcttactt 33554 Query: 400 ggaaaagaacaaatac 415 | |||||||||||||| Sbjct: 33553 gaaaaagaacaaatac 33538 >gi|57790150|gb|AC149828.2| Zea mays clone ZMMBBc0127E02, *** SEQUENCING IN PROGRESS ***, 10 unordered pieces Length = 189099 Score = 127 bits (64), Expect = 2e-27 Identities = 128/150 (85%), Gaps = 7/150 (4%) Strand = Plus / Minus Query: 283 tcattatggcaccagttgcattgctgtcctggttgccgggatttcaagaaatgcagacaa 342 |||||||||||||| |||||||||| ||||||||||||| ||||||||||| | |||||| Sbjct: 86386 tcattatggcaccaattgcattgctatcctggttgccggtatttcaagaaacgtagacaa 86327 Query: 343 gggtacttttcaatgaaggttttagcaggggcc-------tccagatatcccgtattctt 395 || |||||||||||||| ||| || ||||||| |||||||||| ||||||||| Sbjct: 86326 ggacacttttcaatgaagatttcagtaggggcctcctgagtccagatatctcgtattctt 86267 Query: 396 actgggaaaagaacaaatacagtttgaggt 425 ||||||||||||| |||| ||||||||| Sbjct: 86266 actgggaaaagaatgaatattgtttgaggt 86237 >gi|91982794|gb|AC185250.1| Zea mays chromosome UNK clone CH201-546C6; ZMMBBc0546C06, *** SEQUENCING IN PROGRESS ***, 20 unordered pieces Length = 182372 Score = 121 bits (61), Expect = 1e-25 Identities = 114/132 (86%), Gaps = 6/132 (4%) Strand = Plus / Plus Query: 283 tcattatggcaccagttgcattgctgtcctggttgccgggatttcaagaaatgcagacaa 342 |||||||||||||||||||||| |||||||||||||||| ||||||| ||| ||||| || Sbjct: 16669 tcattatggcaccagttgcattactgtcctggttgccggtatttcaacaaacgcagataa 16728 Query: 343 gggtacttttcaatgaaggttttagcaggg------gcctccagatatcccgtattctta 396 ||| |||||| ||||||||||| ||| ||| | |||||||||| |||||||||| Sbjct: 16729 gggcacttttgaatgaaggtttgagctgggcctcccgagtccagatatctcgtattctta 16788 Query: 397 ctgggaaaagaa 408 |||||||||||| Sbjct: 16789 ctgggaaaagaa 16800 >gi|9731505|gb|BE510257.1|BE510257 946051B04.y1 946 - tassel primordium prepared by Schmidt lab Zea mays cDNA, mRNA sequence Length = 590 Score = 42.1 bits (21), Expect = 0.090 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1 gaattcggcacgaggctcgag 21 ||||||||||||||||||||| Sbjct: 555 gaattcggcacgaggctcgag 535 >gi|9732768|gb|BE511520.1|BE511520 946061D06.y1 946 - tassel primordium prepared by Schmidt lab Zea mays cDNA, mRNA sequence Length = 592 Score = 42.1 bits (21), Expect = 0.090 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1 gaattcggcacgaggctcgag 21 ||||||||||||||||||||| Sbjct: 320 gaattcggcacgaggctcgag 300 >gi|27575927|gb|CA998621.1|CA998621 3529_1_12_1_C11.y_1 3529 - 2 mm ear tissue from Schmidt and Hake labs Zea mays cDNA, mRNA sequence Length = 588 Score = 42.1 bits (21), Expect = 0.090 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1 gaattcggcacgaggctcgag 21 ||||||||||||||||||||| Sbjct: 6 gaattcggcacgaggctcgag 26 >gi|6031393|gb|AW076295.1|AW076295 614065B11.y1 614 - root cDNA library from Walbot Lab Zea mays cDNA, mRNA sequence Length = 450 Score = 40.1 bits (20), Expect = 0.35 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 gaattcggcacgaggctcga 20 |||||||||||||||||||| Sbjct: 9 gaattcggcacgaggctcga 28 >gi|6637032|gb|AW261304.1|AW261304 687076G06.y1 687 - Early embryo from Delaware Zea mays cDNA, mRNA sequence Length = 315 Score = 40.1 bits (20), Expect = 0.35 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 gaattcggcacgaggctcga 20 |||||||||||||||||||| Sbjct: 1 gaattcggcacgaggctcga 20 >gi|31998534|gb|CD662123.1|CD662123 3529_1_140_1_D10.y_1 3529 - 2 mm ear tissue from Schmidt and Hake labs Zea mays cDNA, mRNA sequence Length = 624 Score = 40.1 bits (20), Expect = 0.35 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 gaattcggcacgaggctcga 20 |||||||||||||||||||| Sbjct: 3 gaattcggcacgaggctcga 22 >gi|6564119|gb|AW231741.1|AW231741 687023F10.y2 687 - Early embryo from Delaware Zea mays cDNA, mRNA sequence Length = 595 Score = 38.2 bits (19), Expect = 1.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 3 attcggcacgaggctcgag 21 ||||||||||||||||||| Sbjct: 1 attcggcacgaggctcgag 19 >gi|9732002|gb|BE510754.1|BE510754 946055C02.x1 946 - tassel primordium prepared by Schmidt lab Zea mays cDNA, mRNA sequence Length = 417 Score = 38.2 bits (19), Expect = 1.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 1 gaattcggcacgaggctcg 19 ||||||||||||||||||| Sbjct: 397 gaattcggcacgaggctcg 379 >gi|9732175|gb|BE510927.1|BE510927 946056E05.y1 946 - tassel primordium prepared by Schmidt lab Zea mays cDNA, mRNA sequence Length = 515 Score = 38.2 bits (19), Expect = 1.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 1 gaattcggcacgaggctcg 19 ||||||||||||||||||| Sbjct: 369 gaattcggcacgaggctcg 387 >gi|29130808|gb|CB381512.1|CB381512 3529_1_47_1_G08.y_1 3529 - 2 mm ear tissue from Schmidt and Hake labs Zea mays cDNA, mRNA sequence Length = 652 Score = 38.2 bits (19), Expect = 1.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 1 gaattcggcacgaggctcg 19 ||||||||||||||||||| Sbjct: 12 gaattcggcacgaggctcg 30 >gi|21216630|gb|AY112040.1| Zea mays CL19964_1 mRNA sequence Length = 634 Score = 38.2 bits (19), Expect = 1.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 1 gaattcggcacgaggctcg 19 ||||||||||||||||||| Sbjct: 618 gaattcggcacgaggctcg 600 >gi|21216630|gb|AY112040.1| Zea mays CL19964_1 mRNA sequence Length = 634 Score = 38.2 bits (19), Expect = 1.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 1 gaattcggcacgaggctcg 19 ||||||||||||||||||| Sbjct: 618 gaattcggcacgaggctcg 600 >gi|5740564|gb|AI948254.1|AI948254 603039C04.x1 603 - stressed root cDNA library from Wang/Bohnert lab Zea mays cDNA, mRNA sequence Length = 253 Score = 36.2 bits (18), Expect = 5.5 Identities = 18/18 (100%) Strand = Plus / Minus Query: 1 gaattcggcacgaggctc 18 |||||||||||||||||| Sbjct: 245 gaattcggcacgaggctc 228 >gi|5895560|gb|AW036806.1|AW036806 614019A10.y2 614 - root cDNA library from Walbot Lab Zea mays cDNA, mRNA sequence Length = 599 Score = 36.2 bits (18), Expect = 5.5 Identities = 18/18 (100%) Strand = Plus / Plus Query: 1 gaattcggcacgaggctc 18 |||||||||||||||||| Sbjct: 7 gaattcggcacgaggctc 24 >gi|6021360|gb|AW066288.1|AW066288 687009B03.y1 687 - Early embryo from Delaware Zea mays cDNA, mRNA sequence Length = 640 Score = 36.2 bits (18), Expect = 5.5 Identities = 18/18 (100%) Strand = Plus / Plus Query: 2 aattcggcacgaggctcg 19 |||||||||||||||||| Sbjct: 1 aattcggcacgaggctcg 18 >gi|6021435|gb|AW066363.1|AW066363 687001D01.y1 687 - Early embryo from Delaware Zea mays cDNA, mRNA sequence Length = 564 Score = 36.2 bits (18), Expect = 5.5 Identities = 18/18 (100%) Strand = Plus / Plus Query: 1 gaattcggcacgaggctc 18 |||||||||||||||||| Sbjct: 1 gaattcggcacgaggctc 18 >gi|6536542|gb|AW224855.1|AW224855 687044D05.y1 687 - Early embryo from Delaware Zea mays cDNA, mRNA sequence Length = 629 Score = 36.2 bits (18), Expect = 5.5 Identities = 18/18 (100%) Strand = Plus / Plus Query: 1 gaattcggcacgaggctc 18 |||||||||||||||||| Sbjct: 3 gaattcggcacgaggctc 20 >gi|6536582|gb|AW224895.1|AW224895 687047B06.y1 687 - Early embryo from Delaware Zea mays cDNA, mRNA sequence Length = 595 Score = 36.2 bits (18), Expect = 5.5 Identities = 18/18 (100%) Strand = Plus / Plus Query: 1 gaattcggcacgaggctc 18 |||||||||||||||||| Sbjct: 3 gaattcggcacgaggctc 20 >gi|6564090|gb|AW231712.1|AW231712 687023B11.y2 687 - Early embryo from Delaware Zea mays cDNA, mRNA sequence Length = 496 Score = 36.2 bits (18), Expect = 5.5 Identities = 18/18 (100%) Strand = Plus / Plus Query: 1 gaattcggcacgaggctc 18 |||||||||||||||||| Sbjct: 1 gaattcggcacgaggctc 18 >gi|6626394|gb|AW257926.1|AW257926 687064C06.y1 687 - Early embryo from Delaware Zea mays cDNA, mRNA sequence Length = 557 Score = 36.2 bits (18), Expect = 5.5 Identities = 18/18 (100%) Strand = Plus / Plus Query: 1 gaattcggcacgaggctc 18 |||||||||||||||||| Sbjct: 1 gaattcggcacgaggctc 18 >gi|6626579|gb|AW258111.1|AW258111 687068F02.y1 687 - Early embryo from Delaware Zea mays cDNA, mRNA sequence Length = 439 Score = 36.2 bits (18), Expect = 5.5 Identities = 18/18 (100%) Strand = Plus / Plus Query: 1 gaattcggcacgaggctc 18 |||||||||||||||||| Sbjct: 3 gaattcggcacgaggctc 20 >gi|8516636|gb|BE123361.1|BE123361 946001A12.X3 946 - tassel primordium prepared by Schmidt lab Zea mays cDNA, mRNA sequence Length = 544 Score = 36.2 bits (18), Expect = 5.5 Identities = 18/18 (100%) Strand = Plus / Plus Query: 1 gaattcggcacgaggctc 18 |||||||||||||||||| Sbjct: 477 gaattcggcacgaggctc 494 Score = 36.2 bits (18), Expect = 5.5 Identities = 18/18 (100%) Strand = Plus / Minus Query: 1 gaattcggcacgaggctc 18 |||||||||||||||||| Sbjct: 482 gaattcggcacgaggctc 465 >gi|8665796|gb|BE186612.1|BE186612 946009C08.X1 946 - tassel primordium prepared by Schmidt lab Zea mays cDNA, mRNA sequence Length = 374 Score = 36.2 bits (18), Expect = 5.5 Identities = 18/18 (100%) Strand = Plus / Minus Query: 1 gaattcggcacgaggctc 18 |||||||||||||||||| Sbjct: 273 gaattcggcacgaggctc 256 >gi|9028762|gb|BE238802.1|BE238802 946009C08.y1 946 - tassel primordium prepared by Schmidt lab Zea mays cDNA, mRNA sequence Length = 570 Score = 36.2 bits (18), Expect = 5.5 Identities = 18/18 (100%) Strand = Plus / Plus Query: 1 gaattcggcacgaggctc 18 |||||||||||||||||| Sbjct: 483 gaattcggcacgaggctc 500 >gi|9254684|gb|BE345152.1|BE345152 946032E08.y1 946 - tassel primordium prepared by Schmidt lab Zea mays cDNA, mRNA sequence Length = 460 Score = 36.2 bits (18), Expect = 5.5 Identities = 18/18 (100%) Strand = Plus / Minus Query: 1 gaattcggcacgaggctc 18 |||||||||||||||||| Sbjct: 60 gaattcggcacgaggctc 43 >gi|9254824|gb|BE345292.1|BE345292 946032H06.x1 946 - tassel primordium prepared by Schmidt lab Zea mays cDNA, mRNA sequence Length = 429 Score = 36.2 bits (18), Expect = 5.5 Identities = 18/18 (100%) Strand = Plus / Plus Query: 1 gaattcggcacgaggctc 18 |||||||||||||||||| Sbjct: 351 gaattcggcacgaggctc 368 >gi|9461869|gb|BE453945.1|BE453945 946048D08.x1 946 - tassel primordium prepared by Schmidt lab Zea mays cDNA, mRNA sequence Length = 541 Score = 36.2 bits (18), Expect = 5.5 Identities = 18/18 (100%) Strand = Plus / Plus Query: 1 gaattcggcacgaggctc 18 |||||||||||||||||| Sbjct: 498 gaattcggcacgaggctc 515 >gi|9566263|gb|BE475772.1|BE475772 946048D08.x2 946 - tassel primordium prepared by Schmidt lab Zea mays cDNA, mRNA sequence Length = 170 Score = 36.2 bits (18), Expect = 5.5 Identities = 18/18 (100%) Strand = Plus / Plus Query: 1 gaattcggcacgaggctc 18 |||||||||||||||||| Sbjct: 135 gaattcggcacgaggctc 152 >gi|9566296|gb|BE475805.1|BE475805 946048F06.x2 946 - tassel primordium prepared by Schmidt lab Zea mays cDNA, mRNA sequence Length = 494 Score = 36.2 bits (18), Expect = 5.5 Identities = 18/18 (100%) Strand = Plus / Plus Query: 1 gaattcggcacgaggctc 18 |||||||||||||||||| Sbjct: 431 gaattcggcacgaggctc 448 >gi|9732003|gb|BE510755.1|BE510755 946055C02.y1 946 - tassel primordium prepared by Schmidt lab Zea mays cDNA, mRNA sequence Length = 469 Score = 36.2 bits (18), Expect = 5.5 Identities = 18/18 (100%) Strand = Plus / Plus Query: 2 aattcggcacgaggctcg 19 |||||||||||||||||| Sbjct: 1 aattcggcacgaggctcg 18 >gi|9742701|gb|BE518849.1|BE518849 946076H12.x1 946 - tassel primordium prepared by Schmidt lab Zea mays cDNA, mRNA sequence Length = 410 Score = 36.2 bits (18), Expect = 5.5 Identities = 18/18 (100%) Strand = Plus / Plus Query: 1 gaattcggcacgaggctc 18 |||||||||||||||||| Sbjct: 361 gaattcggcacgaggctc 378 >gi|9794667|gb|BE552975.1|BE552975 946088A09.y1 946 - tassel primordium prepared by Schmidt lab Zea mays cDNA, mRNA sequence Length = 560 Score = 36.2 bits (18), Expect = 5.5 Identities = 18/18 (100%) Strand = Plus / Plus Query: 1 gaattcggcacgaggctc 18 |||||||||||||||||| Sbjct: 2 gaattcggcacgaggctc 19 >gi|9825057|gb|BE575259.1|BE575259 946093B12.y1 946 - tassel primordium prepared by Schmidt lab Zea mays cDNA, mRNA sequence Length = 584 Score = 36.2 bits (18), Expect = 5.5 Identities = 18/18 (100%) Strand = Plus / Plus Query: 1 gaattcggcacgaggctc 18 |||||||||||||||||| Sbjct: 2 gaattcggcacgaggctc 19 >gi|9952895|gb|BE639478.1|BE639478 946033D08.x2 946 - tassel primordium prepared by Schmidt lab Zea mays cDNA, mRNA sequence Length = 639 Score = 36.2 bits (18), Expect = 5.5 Identities = 18/18 (100%) Strand = Plus / Plus Query: 1 gaattcggcacgaggctc 18 |||||||||||||||||| Sbjct: 602 gaattcggcacgaggctc 619 >gi|9953106|gb|BE639689.1|BE639689 946037C10.y1 946 - tassel primordium prepared by Schmidt lab Zea mays cDNA, mRNA sequence Length = 411 Score = 36.2 bits (18), Expect = 5.5 Identities = 18/18 (100%) Strand = Plus / Minus Query: 1 gaattcggcacgaggctc 18 |||||||||||||||||| Sbjct: 45 gaattcggcacgaggctc 28 >gi|9953301|gb|BE639884.1|BE639884 946043C08.x1 946 - tassel primordium prepared by Schmidt lab Zea mays cDNA, mRNA sequence Length = 450 Score = 36.2 bits (18), Expect = 5.5 Identities = 18/18 (100%) Strand = Plus / Plus Query: 1 gaattcggcacgaggctc 18 |||||||||||||||||| Sbjct: 405 gaattcggcacgaggctc 422 >gi|18177596|gb|BM378806.1|BM378806 MEST569-F02.univ ISUM7 Zea mays cDNA clone MEST569-F02 3', mRNA sequence Length = 253 Score = 36.2 bits (18), Expect = 5.5 Identities = 18/18 (100%) Strand = Plus / Plus Query: 1 gaattcggcacgaggctc 18 |||||||||||||||||| Sbjct: 226 gaattcggcacgaggctc 243 >gi|24763200|gb|CA398381.1|CA398381 EL01N0302H09.g Endosperm_3 Zea mays cDNA, mRNA sequence Length = 728 Score = 36.2 bits (18), Expect = 5.5 Identities = 18/18 (100%) Strand = Plus / Minus Query: 1 gaattcggcacgaggctc 18 |||||||||||||||||| Sbjct: 728 gaattcggcacgaggctc 711 >gi|26557306|gb|CA829541.1|CA829541 3529_1_6_1_D11.y_1 3529 - 2 mm ear tissue from Schmidt and Hake labs Zea mays cDNA, mRNA sequence Length = 548 Score = 36.2 bits (18), Expect = 5.5 Identities = 18/18 (100%) Strand = Plus / Plus Query: 1 gaattcggcacgaggctc 18 |||||||||||||||||| Sbjct: 13 gaattcggcacgaggctc 30 >gi|27575928|gb|CA998622.1|CA998622 3529_1_12_1_C12.y_1 3529 - 2 mm ear tissue from Schmidt and Hake labs Zea mays cDNA, mRNA sequence Length = 632 Score = 36.2 bits (18), Expect = 5.5 Identities = 18/18 (100%) Strand = Plus / Plus Query: 1 gaattcggcacgaggctc 18 |||||||||||||||||| Sbjct: 2 gaattcggcacgaggctc 19 >gi|27575943|gb|CA998637.1|CA998637 3529_1_12_1_E06.y_1 3529 - 2 mm ear tissue from Schmidt and Hake labs Zea mays cDNA, mRNA sequence Length = 664 Score = 36.2 bits (18), Expect = 5.5 Identities = 18/18 (100%) Strand = Plus / Plus Query: 1 gaattcggcacgaggctc 18 |||||||||||||||||| Sbjct: 12 gaattcggcacgaggctc 29 >gi|28909519|gb|CB330970.1|CB330970 3529_1_25_1_E06.y_1 3529 - 2 mm ear tissue from Schmidt and Hake labs Zea mays cDNA, mRNA sequence Length = 364 Score = 36.2 bits (18), Expect = 5.5 Identities = 18/18 (100%) Strand = Plus / Plus Query: 1 gaattcggcacgaggctc 18 |||||||||||||||||| Sbjct: 13 gaattcggcacgaggctc 30 >gi|28930805|gb|CB334166.1|CB334166 3529_1_21_1_B03.y_2 3529 - 2 mm ear tissue from Schmidt and Hake labs Zea mays cDNA, mRNA sequence Length = 600 Score = 36.2 bits (18), Expect = 5.5 Identities = 18/18 (100%) Strand = Plus / Plus Query: 1 gaattcggcacgaggctc 18 |||||||||||||||||| Sbjct: 17 gaattcggcacgaggctc 34 >gi|29130865|gb|CB381569.1|CB381569 3529_1_51_1_D04.y_1 3529 - 2 mm ear tissue from Schmidt and Hake labs Zea mays cDNA, mRNA sequence Length = 619 Score = 36.2 bits (18), Expect = 5.5 Identities = 18/18 (100%) Strand = Plus / Plus Query: 1 gaattcggcacgaggctc 18 |||||||||||||||||| Sbjct: 13 gaattcggcacgaggctc 30 >gi|31350278|gb|CD434635.1|CD434635 EL01N0326D02.b Endosperm_3 Zea mays cDNA, mRNA sequence Length = 447 Score = 36.2 bits (18), Expect = 5.5 Identities = 18/18 (100%) Strand = Plus / Plus Query: 1 gaattcggcacgaggctc 18 |||||||||||||||||| Sbjct: 3 gaattcggcacgaggctc 20 >gi|31350537|gb|CD434894.1|CD434894 EL01N0330A03.b Endosperm_3 Zea mays cDNA, mRNA sequence Length = 863 Score = 36.2 bits (18), Expect = 5.5 Identities = 18/18 (100%) Strand = Plus / Minus Query: 1 gaattcggcacgaggctc 18 |||||||||||||||||| Sbjct: 652 gaattcggcacgaggctc 635 >gi|31363400|gb|CD447757.1|CD447757 EL01N0203G08.g Endosperm_2 Zea mays cDNA, mRNA sequence Length = 748 Score = 36.2 bits (18), Expect = 5.5 Identities = 18/18 (100%) Strand = Plus / Plus Query: 1 gaattcggcacgaggctc 18 |||||||||||||||||| Sbjct: 450 gaattcggcacgaggctc 467 >gi|31363794|gb|CD448149.1|CD448149 EK07D2303C11.g Endosperm_6 Zea mays cDNA, mRNA sequence Length = 431 Score = 36.2 bits (18), Expect = 5.5 Identities = 18/18 (100%) Strand = Plus / Plus Query: 1 gaattcggcacgaggctc 18 |||||||||||||||||| Sbjct: 9 gaattcggcacgaggctc 26 >gi|31363810|gb|CD448165.1|CD448165 EK07D2303E05.g Endosperm_6 Zea mays cDNA, mRNA sequence Length = 485 Score = 36.2 bits (18), Expect = 5.5 Identities = 18/18 (100%) Strand = Plus / Plus Query: 1 gaattcggcacgaggctc 18 |||||||||||||||||| Sbjct: 9 gaattcggcacgaggctc 26 >gi|31364414|gb|CD448769.1|CD448769 EK07D2309C10.b Endosperm_6 Zea mays cDNA, mRNA sequence Length = 674 Score = 36.2 bits (18), Expect = 5.5 Identities = 18/18 (100%) Strand = Plus / Plus Query: 1 gaattcggcacgaggctc 18 |||||||||||||||||| Sbjct: 20 gaattcggcacgaggctc 37 >gi|31558327|gb|CD527539.1|CD527539 3529_1_121_1_B05.y_1 3529 - 2 mm ear tissue from Schmidt and Hake labs Zea mays cDNA, mRNA sequence Length = 652 Score = 36.2 bits (18), Expect = 5.5 Identities = 18/18 (100%) Strand = Plus / Plus Query: 1 gaattcggcacgaggctc 18 |||||||||||||||||| Sbjct: 20 gaattcggcacgaggctc 37 >gi|31909259|gb|CD650829.1|CD650829 3529_1_132_1_B05.y_2 3529 - 2 mm ear tissue from Schmidt and Hake labs Zea mays cDNA, mRNA sequence Length = 657 Score = 36.2 bits (18), Expect = 5.5 Identities = 18/18 (100%) Strand = Plus / Plus Query: 1 gaattcggcacgaggctc 18 |||||||||||||||||| Sbjct: 4 gaattcggcacgaggctc 21 >gi|31910495|gb|CD651452.1|CD651452 3529_1_133_1_C02.y_1 3529 - 2 mm ear tissue from Schmidt and Hake labs Zea mays cDNA, mRNA sequence Length = 627 Score = 36.2 bits (18), Expect = 5.5 Identities = 18/18 (100%) Strand = Plus / Plus Query: 1 gaattcggcacgaggctc 18 |||||||||||||||||| Sbjct: 18 gaattcggcacgaggctc 35 >gi|32165083|gb|CD670401.1|CD670401 3529_1_137_1_D10.x_1 3529 - 2 mm ear tissue from Schmidt and Hake labs Zea mays cDNA, mRNA sequence Length = 641 Score = 36.2 bits (18), Expect = 5.5 Identities = 18/18 (100%) Strand = Plus / Minus Query: 1 gaattcggcacgaggctc 18 |||||||||||||||||| Sbjct: 600 gaattcggcacgaggctc 583 >gi|60291797|gb|DN190036.1|DN190036 MEST700-G08.T7-1 UGA-ZmSAM-XZ1 Zea mays cDNA, mRNA sequence Length = 689 Score = 36.2 bits (18), Expect = 5.5 Identities = 18/18 (100%) Strand = Plus / Minus Query: 1 gaattcggcacgaggctc 18 |||||||||||||||||| Sbjct: 284 gaattcggcacgaggctc 267 >gi|74245363|gb|DT653277.1|DT653277 ZM_BFb0124H13.r ZM_BFb Zea mays cDNA 5', mRNA sequence Length = 816 Score = 36.2 bits (18), Expect = 5.5 Identities = 18/18 (100%) Strand = Plus / Minus Query: 129 atcattgacatcttcact 146 |||||||||||||||||| Sbjct: 339 atcattgacatcttcact 322 >gi|76019734|gb|DT946904.1|DT946904 ZM_BFb0134M21.r ZM_BFb Zea mays cDNA 5', mRNA sequence Length = 688 Score = 36.2 bits (18), Expect = 5.5 Identities = 18/18 (100%) Strand = Plus / Minus Query: 129 atcattgacatcttcact 146 |||||||||||||||||| Sbjct: 417 atcattgacatcttcact 400 >gi|78082408|gb|DV510820.1|DV510820 ZM_BFb0190K17.r ZM_BFb Zea mays cDNA 5', mRNA sequence Length = 831 Score = 36.2 bits (18), Expect = 5.5 Identities = 18/18 (100%) Strand = Plus / Minus Query: 129 atcattgacatcttcact 146 |||||||||||||||||| Sbjct: 525 atcattgacatcttcact 508 >gi|78120087|gb|DV538471.1|DV538471 ZM_BFb0231O14.r ZM_BFb Zea mays cDNA 5', mRNA sequence Length = 554 Score = 36.2 bits (18), Expect = 5.5 Identities = 18/18 (100%) Strand = Plus / Minus Query: 129 atcattgacatcttcact 146 |||||||||||||||||| Sbjct: 522 atcattgacatcttcact 505 >gi|21209503|gb|AY106425.1| Zea mays PCO122672 mRNA sequence Length = 630 Score = 36.2 bits (18), Expect = 5.5 Identities = 18/18 (100%) Strand = Plus / Plus Query: 1 gaattcggcacgaggctc 18 |||||||||||||||||| Sbjct: 9 gaattcggcacgaggctc 26 >gi|21214061|gb|AY110007.1| Zea mays CL4742_1 mRNA sequence Length = 835 Score = 36.2 bits (18), Expect = 5.5 Identities = 18/18 (100%) Strand = Plus / Minus Query: 1 gaattcggcacgaggctc 18 |||||||||||||||||| Sbjct: 829 gaattcggcacgaggctc 812 >gi|21216379|gb|AY111789.1| Zea mays CL3071_3 mRNA sequence Length = 996 Score = 36.2 bits (18), Expect = 5.5 Identities = 18/18 (100%) Strand = Plus / Minus Query: 1 gaattcggcacgaggctc 18 |||||||||||||||||| Sbjct: 271 gaattcggcacgaggctc 254 >gi|21216379|gb|AY111789.1| Zea mays CL3071_3 mRNA sequence Length = 996 Score = 36.2 bits (18), Expect = 5.5 Identities = 18/18 (100%) Strand = Plus / Minus Query: 1 gaattcggcacgaggctc 18 |||||||||||||||||| Sbjct: 271 gaattcggcacgaggctc 254 >gi|21214061|gb|AY110007.1| Zea mays CL4742_1 mRNA sequence Length = 835 Score = 36.2 bits (18), Expect = 5.5 Identities = 18/18 (100%) Strand = Plus / Minus Query: 1 gaattcggcacgaggctc 18 |||||||||||||||||| Sbjct: 829 gaattcggcacgaggctc 812 >gi|21209503|gb|AY106425.1| Zea mays PCO122672 mRNA sequence Length = 630 Score = 36.2 bits (18), Expect = 5.5 Identities = 18/18 (100%) Strand = Plus / Plus Query: 1 gaattcggcacgaggctc 18 |||||||||||||||||| Sbjct: 9 gaattcggcacgaggctc 26 >gi|58082444|gb|AC155585.2| Zea mays strain B73 clone ZMMBBc0197G07, *** SEQUENCING IN PROGRESS ***, 21 unordered pieces Length = 157505 Score = 36.2 bits (18), Expect = 5.5 Identities = 18/18 (100%) Strand = Plus / Minus Query: 65 aactgctgtcatcactct 82 |||||||||||||||||| Sbjct: 14259 aactgctgtcatcactct 14242 Database: mais_NCBI.fasta Posted date: Apr 26, 2006 11:51 AM Number of letters in database: 669,372,029 Number of sequences in database: 836,351 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 206,948 Number of Sequences: 836351 Number of extensions: 206948 Number of successful extensions: 17884 Number of sequences better than 10.0: 77 Number of HSP's better than 10.0 without gapping: 77 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 17752 Number of HSP's gapped (non-prelim): 130 length of query: 675 length of database: 669,372,029 effective HSP length: 19 effective length of query: 656 effective length of database: 653,481,360 effective search space: 428683772160 effective search space used: 428683772160 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 18 (36.2 bits)