BLASTN 2.2.6 [Apr-09-2003] BLASTN 2.2.6 [Apr-09-2003] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= 2921788.2.1 (606 letters) Database: mais_NCBI.fasta 836,351 sequences; 669,372,029 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|78026487|gb|DV494874.1|DV494874 1000200-C09.T7-1 UGI-Reseq Ze... 1126 0.0 gi|5607873|gb|AI901540.1|AI901540 618006G06.x1 618 - Inbred Tass... 1116 0.0 gi|87155488|gb|DY400277.1|DY400277 V-946-6B-H01.Gal4-R UGV-Reseq... 1112 0.0 gi|5455815|gb|AI833505.1|AI833505 605091C07.x2 605 - Endosperm c... 1100 0.0 gi|22546588|gb|BU098899.1|BU098899 946159H03.y1 946 - tassel pri... 1072 0.0 gi|26559476|gb|CA831711.1|CA831711 1117022H01.y1 1117 - Unigene ... 1029 0.0 gi|21331232|gb|BQ486613.1|BQ486613 1091046B01.x1 1091 - Immature... 973 0.0 gi|22546587|gb|BU098898.1|BU098898 946159H03.x1 946 - tassel pri... 864 0.0 gi|12973375|gb|BG268449.1|BG268449 1000200C09.x2 1000 - Unigene ... 757 0.0 gi|22543103|gb|BU093541.1|BU093541 1091046B01.y1 1091 - Immature... 652 0.0 gi|28910469|gb|CB331454.1|CB331454 3529_1_26_1_F01.y_1 3529 - 2 ... 367 1e-99 gi|29544090|gb|CB604470.1|CB604470 3529_1_63_1_G09.x_1 3529 - 2 ... 367 1e-99 gi|31405664|gb|CD484396.1|CD484396 3529_1_113_1_H06.y_1 3529 - 2... 367 1e-99 gi|31405663|gb|CD484395.1|CD484395 3529_1_113_1_H06.x_1 3529 - 2... 355 4e-96 gi|29544573|gb|CB604953.1|CB604953 3529_1_63_1_G09.y_1 3529 - 2 ... 129 4e-28 gi|28910467|gb|CB331453.1|CB331453 3529_1_26_1_F01.x_1 3529 - 2 ... 94 2e-17 gi|4804342|gb|AI666208.1|AI666208 606006C06.x1 606 - Ear tissue ... 88 2e-15 gi|22473430|gb|BU037910.1|BU037910 946143B05.y1 946 - tassel pri... 88 2e-15 gi|29130573|gb|CB381277.1|CB381277 3529_1_45_1_C12.y_1 3529 - 2 ... 88 2e-15 gi|29946221|gb|CB816040.1|CB816040 3529_1_79_1_A08.x_1 3529 - 2 ... 88 2e-15 gi|29946970|gb|CB816417.1|CB816417 3529_1_79_1_A08.y_1 3529 - 2 ... 88 2e-15 gi|50326115|gb|CO521241.1|CO521241 3530_1_140_1_D03.x_1 3530 - F... 88 2e-15 gi|50326116|gb|CO521242.1|CO521242 3530_1_140_1_D03.y_1 3530 - F... 88 2e-15 gi|60342927|gb|DN209900.1|DN209900 MEST891_E03.T7-1 UGA-ZmSAM-XZ... 88 2e-15 gi|60354145|gb|DN221118.1|DN221118 MEST1107_D10.T7-1 UGA-ZmSAM-X... 88 2e-15 gi|71321537|gb|DR797464.1|DR797464 ZM_BFb0019J07.f ZM_BFb Zea ma... 88 2e-15 gi|71321541|gb|DR797465.1|DR797465 ZM_BFb0019J07.r ZM_BFb Zea ma... 88 2e-15 gi|71445071|gb|DR826121.1|DR826121 ZM_BFb0068M04.f ZM_BFb Zea ma... 88 2e-15 gi|71445072|gb|DR826122.1|DR826122 ZM_BFb0068M04.r ZM_BFb Zea ma... 88 2e-15 gi|76285305|gb|DV024873.1|DV024873 ZM_BFb0145D18.f ZM_BFb Zea ma... 88 2e-15 gi|76285306|gb|DV024874.1|DV024874 ZM_BFb0145D18.r ZM_BFb Zea ma... 88 2e-15 gi|78024734|gb|DV493121.1|DV493121 1000081-A12.T7-1 UGI-Reseq Ze... 88 2e-15 gi|86474196|gb|DY240566.1|DY240566 ZM_BFb0260C12.f ZM_BFb Zea ma... 88 2e-15 gi|87155268|gb|DY400057.1|DY400057 V-946-4D-A09.Gal4-R UGV-Reseq... 88 2e-15 gi|16919825|gb|BM074373.1|BM074373 MEST85-C11.T3 ISUM4-TN Zea ma... 70 4e-10 gi|28986203|gb|CB351020.1|CB351020 MEST259-B08.univ ISUM5-RN Zea... 70 4e-10 gi|5816327|gb|AI987243.1|AI987243 660002F02.x1 660 - Mixed stage... 50 3e-04 gi|5928690|gb|AW055907.1|AW055907 660002F02.y1 660 - Mixed stage... 50 3e-04 gi|21329891|gb|BQ485272.1|BQ485272 3524_1_12_1_D12.y_1 3524 - Ma... 50 3e-04 gi|21329974|gb|BQ485355.1|BQ485355 3524_1_13_1_E10.y_1 3524 - Ma... 50 3e-04 gi|21330088|gb|BQ485469.1|BQ485469 3524_1_14_1_H12.y_1 3524 - Ma... 50 3e-04 gi|21390804|gb|BQ528853.1|BQ528853 3524_1_42_1_C01.y_1 3524 - Ma... 50 3e-04 gi|21390913|gb|BQ528962.1|BQ528962 3524_1_43_1_E07.y_1 3524 - Ma... 50 3e-04 gi|21480892|gb|BQ577575.1|BQ577575 3524_1_38_1_G08.y_1 3524 - Ma... 50 3e-04 gi|21481175|gb|BQ577858.1|BQ577858 3524_1_47_1_B03.y_1 3524 - Ma... 50 3e-04 gi|21481350|gb|BQ578033.1|BQ578033 3524_1_52_1_C04.y_1 3524 - Ma... 50 3e-04 gi|22545202|gb|BU097561.1|BU097561 3524_1_51_1_D05.y_1 3524 - Ma... 50 3e-04 gi|22545259|gb|BU097618.1|BU097618 3524_1_19_1_A11.y_1 3524 - Ma... 50 3e-04 gi|26455139|gb|CA826722.1|CA826722 1114004A11.y1 1114 - Unigene ... 50 3e-04 gi|26455290|gb|CA826873.1|CA826873 1114006C01.y1 1114 - Unigene ... 50 3e-04 gi|26455498|gb|CA827081.1|CA827081 1114009F02.y1 1114 - Unigene ... 50 3e-04 gi|32869992|gb|CF009674.1|CF009674 QBJ21f09.xg QBJ Zea mays cDNA... 50 3e-04 gi|87154596|gb|DY399385.1|DY399385 IV-3524-3A-F02.T3 UGIV-3524-R... 50 3e-04 gi|87154711|gb|DY399500.1|DY399500 IV-3524-1C-A11.T3 UGIV-3524-R... 50 3e-04 gi|87154778|gb|DY399567.1|DY399567 IV-3524-1C-A11.T7-1 UGIV-3524... 50 3e-04 gi|87155144|gb|DY399933.1|DY399933 IV-3524-3A-F02.T7-1 UGIV-3524... 50 3e-04 gi|21211228|gb|AY108150.1| Zea mays PCO117613 mRNA sequence 50 3e-04 gi|21211228|gb|AY108150.1| Zea mays PCO117613 mRNA sequence 50 3e-04 gi|87154337|gb|DY399126.1|DY399126 IV-3524-2B-C01.T3 UGIV-3524-R... 44 0.020 gi|32869482|gb|CF009164.1|CF009164 QBJ18d08.xg QBJ Zea mays cDNA... 40 0.32 gi|71433972|gb|DR815022.1|DR815022 ZM_BFb0044P10.r ZM_BFb Zea ma... 40 0.32 gi|76285125|gb|DV024693.1|DV024693 ZM_BFb0144P19.f ZM_BFb Zea ma... 40 0.32 gi|76285126|gb|DV024694.1|DV024694 ZM_BFb0144P19.r ZM_BFb Zea ma... 40 0.32 gi|78077861|gb|DV506288.1|DV506288 ZM_BFb0183P06.r ZM_BFb Zea ma... 40 0.32 gi|78081992|gb|DV510404.1|DV510404 ZM_BFb0190A06.r ZM_BFb Zea ma... 40 0.32 gi|78090243|gb|DV518617.1|DV518617 ZM_BFb0202L05.r ZM_BFb Zea ma... 40 0.32 gi|78125473|gb|DV543857.1|DV543857 ZM_BFb0240D01.r ZM_BFb Zea ma... 38 1.3 gi|58082296|gb|AC155434.2| Zea mays strain B73 clone ZMMBBb0259M... 38 1.3 gi|8273187|gb|BE012277.1|BE012277 945016G03.Y2 945 - Mixed adult... 36 4.9 gi|18176760|gb|BM351693.1|BM351693 MEST344-H10.T3 ISUM5-RN Zea m... 36 4.9 gi|31360663|gb|CD445020.1|CD445020 EL01N0446G01.b Endosperm_4 Ze... 36 4.9 gi|37424527|gb|CF649996.1|CF649996 3530_1_80_1_F06.x_1 3530 - Fu... 36 4.9 gi|67028026|gb|CO456775.1|CO456775 MZCCS20007F10.g Maize Endospe... 36 4.9 gi|76280829|gb|DV020397.1|DV020397 ZM_BFb0138L08.r ZM_BFb Zea ma... 36 4.9 gi|78090103|gb|DV518477.1|DV518477 ZM_BFb0202I01.r ZM_BFb Zea ma... 36 4.9 gi|78093088|gb|DV521462.1|DV521462 ZM_BFb0206M12.r ZM_BFb Zea ma... 36 4.9 gi|78112295|gb|DV530689.1|DV530689 ZM_BFb0220I24.r ZM_BFb Zea ma... 36 4.9 gi|86471477|gb|DY237847.1|DY237847 ZM_BFb0255E10.r ZM_BFb Zea ma... 36 4.9 gi|91982820|gb|AC185276.1| Zea mays chromosome UNK clone CH201-3... 36 4.9 gi|58082345|gb|AC155485.2| Zea mays strain B73 clone ZMMBBc0011I... 36 4.9 >gi|78026487|gb|DV494874.1|DV494874 1000200-C09.T7-1 UGI-Reseq Zea mays cDNA, mRNA sequence Length = 660 Score = 1126 bits (568), Expect = 0.0 Identities = 577/580 (99%) Strand = Plus / Minus Query: 1 tacgaccgcgcgcaccgcccctacgcggctcccgcccccgccggtgagtacgaccgcccc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 623 tacgaccgcgcgcaccgcccctacgcggctcccgcccccgccggtgagtacgaccgcccc 564 Query: 61 taccgcaacgaggtcgtgccctacggtgaccgccgcatcgacatcatcgtcaagccgccc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 563 taccgcaacgaggtcgtgccctacggtgaccgccgcatcgacatcatcgtcaagccgccc 504 Query: 121 gcgaggtcgcccccgccggtatccaccaggggcggcgggggaggggtggggtcggcgtgg 180 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 503 gcgaggtcgccgccgccggtatccaccaggggcggcgggggaggggtggggtcggcgtgg 444 Query: 181 tgcttcagcgatccggagatgaaaaggcggcggcgggtggccagctacaaggcttactcg 240 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 443 tgcttcagcgatccggagatgaagaggcggcggcgggtggccagctacaaggcttactcg 384 Query: 241 gcggagggcaaagtcaaggcatcgttccccaggggattccgctggatcaaggccaagtgc 300 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 383 gcggagggcaaagtcaaggcatcgttccgcaggggattccgctggatcaaggccaagtgc 324 Query: 301 tccgagctcatccatggctgaacccggcatctcggtgaaattctattgtattggcatggt 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 323 tccgagctcatccatggctgaacccggcatctcggtgaaattctattgtattggcatggt 264 Query: 361 gcaagatgcggctacaaagcgcgagagatggtttgtctgttgttatttcgctaattcgct 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 263 gcaagatgcggctacaaagcgcgagagatggtttgtctgttgttatttcgctaattcgct 204 Query: 421 ctcaaaatgtggaagagaatttgttctgagattgtgtagagaactttgttgcccccctgg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 203 ctcaaaatgtggaagagaatttgttctgagattgtgtagagaactttgttgcccccctgg 144 Query: 481 ttataggaaaagaactcgatggagatctgctgagattacttgtcgctacctgccaattgc 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 143 ttataggaaaagaactcgatggagatctgctgagattacttgtcgctacctgccaattgc 84 Query: 541 ccctaattctgttcaaaaaatgtttgaagaagacttgaat 580 |||||||||||||||||||||||||||||||||||||||| Sbjct: 83 ccctaattctgttcaaaaaatgtttgaagaagacttgaat 44 >gi|5607873|gb|AI901540.1|AI901540 618006G06.x1 618 - Inbred Tassel cDNA Library Zea mays cDNA, mRNA sequence Length = 599 Score = 1116 bits (563), Expect = 0.0 Identities = 568/570 (99%) Strand = Plus / Minus Query: 19 ccctacgcggctcccgcccccgccggtgagtacgaccgcccctaccgcaacgaggtcgtg 78 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 588 ccctacgcggctcccgcccccgccggtgagtacgaccgcccctaccgcaacgaggtcgtg 529 Query: 79 ccctacggtgaccgccgcatcgacatcatcgtcaagccgcccgcgaggtcgcccccgccg 138 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 528 ccntacggtgaccgccgcatcgacatcatcgtcaagccgcccgcgaggtcgcccccgccg 469 Query: 139 gtatccaccaggggcggcgggggaggggtggggtcggcgtggtgcttcagcgatccggag 198 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 468 gtatcccccaggggcggcgggggaggggtggggtcggcgtggtgcttcagcgatccggag 409 Query: 199 atgaaaaggcggcggcgggtggccagctacaaggcttactcggcggagggcaaagtcaag 258 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 408 atgaaaaggcggcggcgggtggccagctacaaggcttactcggcggagggcaaagtcaag 349 Query: 259 gcatcgttccccaggggattccgctggatcaaggccaagtgctccgagctcatccatggc 318 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 348 gcatcgttccccaggggattccgctggatcaaggccaagtgctccgagctcatccatggc 289 Query: 319 tgaacccggcatctcggtgaaattctattgtattggcatggtgcaagatgcggctacaaa 378 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 288 tgaacccggcatctcggtgaaattctattgtattggcatggtgcaagatgcggctacaaa 229 Query: 379 gcgcgagagatggtttgtctgttgttatttcgctaattcgctctcaaaatgtggaagaga 438 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 228 gcgcgagagatggtttgtctgttgttatttcgctaattcgctctcaaaatgtggaagaga 169 Query: 439 atttgttctgagattgtgtagagaactttgttgcccccctggttataggaaaagaactcg 498 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 168 atttgttctgagattgtgtagagaactttgttgcccccctggttataggaaaagaactcg 109 Query: 499 atggagatctgctgagattacttgtcgctacctgccaattgcccctaattctgttcaaaa 558 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 108 atggagatctgctgagattacttgtcgctacctgccaattgcccctaattctgttcaaaa 49 Query: 559 aatgtttgaagaagacttgaatgctcggag 588 |||||||||||||||||||||||||||||| Sbjct: 48 aatgtttgaagaagacttgaatgctcggag 19 >gi|87155488|gb|DY400277.1|DY400277 V-946-6B-H01.Gal4-R UGV-Reseq Zea mays cDNA, mRNA sequence Length = 659 Score = 1112 bits (561), Expect = 0.0 Identities = 577/581 (99%), Gaps = 1/581 (0%) Strand = Plus / Plus Query: 1 tacgaccgcgcgcaccgcccctacgcggctcccgcccccgccggtgagtacgaccgcccc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 76 tacgaccgcgcgcaccgcccctacgcggctcccgcccccgccggtgagtacgaccgcccc 135 Query: 61 taccgcaacgaggtcgtgccctacggtgaccgccgcatcgacatcatcgtcaagccgccc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136 taccgcaacgaggtcgtgccctacggtgaccgccgcatcgacatcatcgtcaagccgccc 195 Query: 121 gcgaggtcgcccccgccggtatccaccaggggcggcgggggaggggtggggtcggcgtgg 180 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 196 gcgaggtcgccgccgccggtatccaccaggggcggcgggggaggggtggggtcggcgtgg 255 Query: 181 tgcttcagcgatccggagatgaaaaggcggcggcgggtggccagctacaaggcttactcg 240 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 256 tgcttcagcgatccggagatgaagaggcggcggcgggtggccagctacaaggcttactcg 315 Query: 241 gcggagggcaaagtcaaggcatcgttccccaggggattccgctggatcaaggccaagtgc 300 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 316 gcggagggcaaagtcaaggcatcgttccgcaggggattccgctggatcaaggccaagtgc 375 Query: 301 tccgagctcatccatggctgaacccggcatctcggtgaaattctattgtattggcatggt 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 376 tccgagctcatccatggctgaacccggcatctcggtgaaattctattgtattggcatggt 435 Query: 361 gcaagatgcggctacaaagcgcgagagatggtttgtctgttgttatttcgctaattcgct 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 436 gcaagatgcggctacaaagcgcgagagatggtttgtctgttgttatttcgctaattcgct 495 Query: 421 ctcaaaatgtggaagagaatttgttctgagattgtgtagagaactttgttgcccccctgg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 496 ctcaaaatgtggaagagaatttgttctgagattgtgtagagaactttgttgcccccctgg 555 Query: 481 ttataggaaaagaactcgatggagatctgctgagattacttgtcgctacctgccaattgc 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 556 ttataggaaaagaactcgatggagatctgctgagattacttgtcgctacctgccaattgc 615 Query: 541 ccctaattctgttcaaaaaat-gtttgaagaagacttgaat 580 ||||||||||||||||||||| ||||||||||||||||||| Sbjct: 616 ccctaattctgttcaaaaaatggtttgaagaagacttgaat 656 >gi|5455815|gb|AI833505.1|AI833505 605091C07.x2 605 - Endosperm cDNA library from Schmidt lab Zea mays cDNA, mRNA sequence Length = 567 Score = 1100 bits (555), Expect = 0.0 Identities = 564/567 (99%) Strand = Plus / Minus Query: 1 tacgaccgcgcgcaccgcccctacgcggctcccgcccccgccggtgagtacgaccgcccc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 567 tacgaccgcgcgcaccgcccctacgcggctcccgcccccgccggtgagtacgaccgcccc 508 Query: 61 taccgcaacgaggtcgtgccctacggtgaccgccgcatcgacatcatcgtcaagccgccc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 507 taccgcaacgaggtcgtgccctacggtgaccgccgcatcgacatcatcgtcaagccgccc 448 Query: 121 gcgaggtcgcccccgccggtatccaccaggggcggcgggggaggggtggggtcggcgtgg 180 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 447 gcgaggtcgccgccgccggtatccaccaggggcggcgggggaggggtggggtcggcgtgg 388 Query: 181 tgcttcagcgatccggagatgaaaaggcggcggcgggtggccagctacaaggcttactcg 240 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 387 tgcttcagcgatccggagatgaagaggcggcggcgggtggccagctacaaggcttactcg 328 Query: 241 gcggagggcaaagtcaaggcatcgttccccaggggattccgctggatcaaggccaagtgc 300 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 327 gcggagggcaaagtcaaggcatcgttccgcaggggattccgctggatcaaggccaagtgc 268 Query: 301 tccgagctcatccatggctgaacccggcatctcggtgaaattctattgtattggcatggt 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 267 tccgagctcatccatggctgaacccggcatctcggtgaaattctattgtattggcatggt 208 Query: 361 gcaagatgcggctacaaagcgcgagagatggtttgtctgttgttatttcgctaattcgct 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 207 gcaagatgcggctacaaagcgcgagagatggtttgtctgttgttatttcgctaattcgct 148 Query: 421 ctcaaaatgtggaagagaatttgttctgagattgtgtagagaactttgttgcccccctgg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 147 ctcaaaatgtggaagagaatttgttctgagattgtgtagagaactttgttgcccccctgg 88 Query: 481 ttataggaaaagaactcgatggagatctgctgagattacttgtcgctacctgccaattgc 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 87 ttataggaaaagaactcgatggagatctgctgagattacttgtcgctacctgccaattgc 28 Query: 541 ccctaattctgttcaaaaaatgtttga 567 ||||||||||||||||||||||||||| Sbjct: 27 ccctaattctgttcaaaaaatgtttga 1 >gi|22546588|gb|BU098899.1|BU098899 946159H03.y1 946 - tassel primordium prepared by Schmidt lab Zea mays cDNA, mRNA sequence Length = 625 Score = 1072 bits (541), Expect = 0.0 Identities = 550/553 (99%) Strand = Plus / Plus Query: 1 tacgaccgcgcgcaccgcccctacgcggctcccgcccccgccggtgagtacgaccgcccc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 73 tacgaccgcgcgcaccgcccctacgcggctcccgcccccgccggtgagtacgaccgcccc 132 Query: 61 taccgcaacgaggtcgtgccctacggtgaccgccgcatcgacatcatcgtcaagccgccc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133 taccgcaacgaggtcgtgccctacggtgaccgccgcatcgacatcatcgtcaagccgccc 192 Query: 121 gcgaggtcgcccccgccggtatccaccaggggcggcgggggaggggtggggtcggcgtgg 180 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 193 gcgaggtcgccgccgccggtatccaccaggggcggcgggggaggggtggggtcggcgtgg 252 Query: 181 tgcttcagcgatccggagatgaaaaggcggcggcgggtggccagctacaaggcttactcg 240 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 253 tgcttcagcgatccggagatgaagaggcggcggcgggtggccagctacaaggcttactcg 312 Query: 241 gcggagggcaaagtcaaggcatcgttccccaggggattccgctggatcaaggccaagtgc 300 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 313 gcggagggcaaagtcaaggcatcgttccgcaggggattccgctggatcaaggccaagtgc 372 Query: 301 tccgagctcatccatggctgaacccggcatctcggtgaaattctattgtattggcatggt 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 373 tccgagctcatccatggctgaacccggcatctcggtgaaattctattgtattggcatggt 432 Query: 361 gcaagatgcggctacaaagcgcgagagatggtttgtctgttgttatttcgctaattcgct 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 433 gcaagatgcggctacaaagcgcgagagatggtttgtctgttgttatttcgctaattcgct 492 Query: 421 ctcaaaatgtggaagagaatttgttctgagattgtgtagagaactttgttgcccccctgg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 493 ctcaaaatgtggaagagaatttgttctgagattgtgtagagaactttgttgcccccctgg 552 Query: 481 ttataggaaaagaactcgatggagatctgctgagattacttgtcgctacctgccaattgc 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 553 ttataggaaaagaactcgatggagatctgctgagattacttgtcgctacctgccaattgc 612 Query: 541 ccctaattctgtt 553 ||||||||||||| Sbjct: 613 ccctaattctgtt 625 >gi|26559476|gb|CA831711.1|CA831711 1117022H01.y1 1117 - Unigene V from Maize Genome Project Zea mays cDNA, mRNA sequence Length = 573 Score = 1029 bits (519), Expect = 0.0 Identities = 528/531 (99%) Strand = Plus / Plus Query: 1 tacgaccgcgcgcaccgcccctacgcggctcccgcccccgccggtgagtacgaccgcccc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 43 tacgaccgcgcgcaccgcccctacgcggctcccgcccccgccggtgagtacgaccgcccc 102 Query: 61 taccgcaacgaggtcgtgccctacggtgaccgccgcatcgacatcatcgtcaagccgccc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103 taccgcaacgaggtcgtgccctacggtgaccgccgcatcgacatcatcgtcaagccgccc 162 Query: 121 gcgaggtcgcccccgccggtatccaccaggggcggcgggggaggggtggggtcggcgtgg 180 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 163 gcgaggtcgccgccgccggtatccaccaggggcggcgggggaggggtggggtcggcgtgg 222 Query: 181 tgcttcagcgatccggagatgaaaaggcggcggcgggtggccagctacaaggcttactcg 240 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 223 tgcttcagcgatccggagatgaagaggcggcggcgggtggccagctacaaggcttactcg 282 Query: 241 gcggagggcaaagtcaaggcatcgttccccaggggattccgctggatcaaggccaagtgc 300 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 283 gcggagggcaaagtcaaggcatcgttccgcaggggattccgctggatcaaggccaagtgc 342 Query: 301 tccgagctcatccatggctgaacccggcatctcggtgaaattctattgtattggcatggt 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 343 tccgagctcatccatggctgaacccggcatctcggtgaaattctattgtattggcatggt 402 Query: 361 gcaagatgcggctacaaagcgcgagagatggtttgtctgttgttatttcgctaattcgct 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 403 gcaagatgcggctacaaagcgcgagagatggtttgtctgttgttatttcgctaattcgct 462 Query: 421 ctcaaaatgtggaagagaatttgttctgagattgtgtagagaactttgttgcccccctgg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 463 ctcaaaatgtggaagagaatttgttctgagattgtgtagagaactttgttgcccccctgg 522 Query: 481 ttataggaaaagaactcgatggagatctgctgagattacttgtcgctacct 531 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 523 ttataggaaaagaactcgatggagatctgctgagattacttgtcgctacct 573 >gi|21331232|gb|BQ486613.1|BQ486613 1091046B01.x1 1091 - Immature ear with common ESTs screened by Schmidt lab Zea mays cDNA, mRNA sequence Length = 518 Score = 973 bits (491), Expect = 0.0 Identities = 513/519 (98%), Gaps = 1/519 (0%) Strand = Plus / Minus Query: 26 cggctcccgcccccgccggtgagtacgaccgcccctaccgcaacgaggtcgtgccctacg 85 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 518 cggctcccgcccccgccggtgagtacgaccgcccctaccgcaacgaggtcgtgccctacg 459 Query: 86 gtgaccgccgcatcgacatcatcgtcaagccgcccgcgaggtcgcccccgccggtatcca 145 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 458 gtgaccgccgcatcgacatcatcgtcaagccgcccgcgaggtcgccgccgccggtatcca 399 Query: 146 ccaggggcggcgggggaggggtggggtcggcgtggtgcttcagcgatccggagatgaaaa 205 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 398 ccaggggcggcgggggaggggtggggtcggcgtggtgcttcagcgatccggagatgaaga 339 Query: 206 ggcggcggcgggtggccagctacaaggcttactcggcggagggcaaagtcaaggcatcgt 265 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 338 ggcggcggcgggtggccagcttcaaggcttactcggcggagggcaaagtcaaggcatcgt 279 Query: 266 tccccaggggattccgctggatcaaggccaagtgctccgagctcatccatggctgaaccc 325 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 278 tccgcaggggattccgctggatcaaggccaagtgctccgagctcatccatggctgaaccc 219 Query: 326 ggcatctcggtgaaattctattgtattggcatggtgcaagatgcggctacaaagcgcgag 385 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 218 ggcatctcggtgaaattctattgtattggcatggtgcaagatgcggctacaaagcgcgag 159 Query: 386 agatggtttgtctgttgttatttcgctaattcgctctcaaaatgtggaagagaatttgtt 445 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 158 agatggtttgtctgttgttatttcgctaattcgctctcaaaatgtggaagagaatttgtt 99 Query: 446 ctgagattgtgtagagaactttgttgcccccctggttataggaaaagaactcgatggaga 505 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 98 ctgagattgtgtagagaactttgttgcccccctggttataggaaaagaactcgatggaga 39 Query: 506 tctgctgagattacttgtcgctacctgccaattgcccct 544 |||||||||||| |||||||||||||||| ||||||||| Sbjct: 38 tctgctgagattgcttgtcgctacctgcc-attgcccct 1 >gi|22546587|gb|BU098898.1|BU098898 946159H03.x1 946 - tassel primordium prepared by Schmidt lab Zea mays cDNA, mRNA sequence Length = 480 Score = 864 bits (436), Expect = 0.0 Identities = 466/476 (97%) Strand = Plus / Minus Query: 103 atcatcgtcaagccgcccgcgaggtcgcccccgccggtatccaccaggggcggcggggga 162 ||||||||||||||||||||||||||||| |||||||||||| || |||||||||||||| Sbjct: 480 atcatcgtcaagccgcccgcgaggtcgccgccgccggtatccccccggggcggcggggga 421 Query: 163 ggggtggggtcggcgtggtgcttcagcgatccggagatgaaaaggcggcggcgggtggcc 222 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 420 ggggtggggtcggcgtggtgcttcagcgatccggagatgaagaggcggcggcgggtggcc 361 Query: 223 agctacaaggcttactcggcggagggcaaagtcaaggcatcgttccccaggggattccgc 282 |||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 360 cgctacaaggctttctcggcggagggcaaagtcaaggcatcgttccgcaggggattccgc 301 Query: 283 tggatcaaggccaagtgctccgagctcatccatggctgaacccggcatctcggtgaaatt 342 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 300 tggatcaaggccaagtgctccgagctcatccctggctgaacccggcatctcggtgaaatt 241 Query: 343 ctattgtattggcatggtgcaagatgcggctacaaagcgcgagagatggtttgtctgttg 402 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 240 ttattgtattggcatggtgcaagatgcggctacaaagcgcgagagatggtttgtctgttg 181 Query: 403 ttatttcgctaattcgctctcaaaatgtggaagagaatttgttctgagattgtgtagaga 462 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 180 ttatttcgctaattcgctctcaaaatgtggaagagaatttgttctgagattgtgtagaga 121 Query: 463 actttgttgcccccctggttataggaaaagaactcgatggagatctgctgagattacttg 522 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 120 actttgttgcccccctggttataggaaaagaactcgatggagatctgctgagattacttg 61 Query: 523 tcgctacctgccaattgcccctaattctgttcaaaaaatgtttgaagaagacttga 578 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 60 tcgctacctgccaattgcccctaattctgttcaaaaaatgtttgaagaaggcttga 5 >gi|12973375|gb|BG268449.1|BG268449 1000200C09.x2 1000 - Unigene I from Maize Genome Project Zea mays cDNA, mRNA sequence Length = 551 Score = 757 bits (382), Expect = 0.0 Identities = 391/394 (99%) Strand = Plus / Minus Query: 1 tacgaccgcgcgcaccgcccctacgcggctcccgcccccgccggtgagtacgaccgcccc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 520 tacgaccgcgcgcaccgcccctacgcggctcccgcccccgccggtgagtacgaccgcccc 461 Query: 61 taccgcaacgaggtcgtgccctacggtgaccgccgcatcgacatcatcgtcaagccgccc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 460 taccgcaacgaggtcgtgccctacggtgaccgccgcatcgacatcatcgtcaagccgccc 401 Query: 121 gcgaggtcgcccccgccggtatccaccaggggcggcgggggaggggtggggtcggcgtgg 180 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 400 gcgaggtcgccgccgccggtatccaccaggggcggcgggggaggggtggggtcggcgtgg 341 Query: 181 tgcttcagcgatccggagatgaaaaggcggcggcgggtggccagctacaaggcttactcg 240 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 340 tgcttcagcgatccggagatgaagaggcggcggcgggtggccagctacaaggcttactcg 281 Query: 241 gcggagggcaaagtcaaggcatcgttccccaggggattccgctggatcaaggccaagtgc 300 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 280 gcggagggcaaagtcaaggcatcgttccgcaggggattccgctggatcaaggccaagtgc 221 Query: 301 tccgagctcatccatggctgaacccggcatctcggtgaaattctattgtattggcatggt 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 220 tccgagctcatccatggctgaacccggcatctcggtgaaattctattgtattggcatggt 161 Query: 361 gcaagatgcggctacaaagcgcgagagatggttt 394 |||||||||||||||||||||||||||||||||| Sbjct: 160 gcaagatgcggctacaaagcgcgagagatggttt 127 Score = 210 bits (106), Expect = 2e-52 Identities = 113/114 (99%), Gaps = 1/114 (0%) Strand = Plus / Minus Query: 408 tcgctaattcgctctcaaaatgtggaagagaatttgttctgagattgtgtagagaacttt 467 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 113 tcgctaattcgctctcaaa-tgtggaagagaatttgttctgagattgtgtagagaacttt 55 Query: 468 gttgcccccctggttataggaaaagaactcgatggagatctgctgagattactt 521 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 54 gttgcccccctggttataggaaaagaactcgatggagatctgctgagattactt 1 >gi|22543103|gb|BU093541.1|BU093541 1091046B01.y1 1091 - Immature ear with common ESTs screened by Schmidt lab Zea mays cDNA, mRNA sequence Length = 349 Score = 652 bits (329), Expect = 0.0 Identities = 344/349 (98%) Strand = Plus / Plus Query: 94 cgcatcgacatcatcgtcaagccgcccgcgaggtcgcccccgccggtatccaccaggggc 153 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 1 cgcatcgacatcatcgtcaagccgcccgcgaggtcgccgccgccggtatccaccaggggc 60 Query: 154 ggcgggggaggggtggggtcggcgtggtgcttcagcgatccggagatgaaaaggcggcgg 213 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 61 ggcgggggaggggtggggtcggcgtggtgcttcagcgatccggagatgaagaggcggcgg 120 Query: 214 cgggtggccagctacaaggcttactcggcggagggcaaagtcaaggcatcgttccccagg 273 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 121 cgggtggccagctacaaggcttactcggcggagggcaaagtcaaggcatcgttccgcagg 180 Query: 274 ggattccgctggatcaaggccaagtgctccgagctcatccatggctgaacccggcatctc 333 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 ggattccgctggatcaaggccaagtgctccgagctcatccatggctgaacccggcatctc 240 Query: 334 ggtgaaattctattgtattggcatggtgcaagatgcggctacaaagcgcgagagatggtt 393 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 241 ggtgaaattctattgtattggcatggtgcaagatgcggctacaaagcgcgagagatgggt 300 Query: 394 tgtctgttgttatttcgctaattcgctctcaaaatgtggaagagaattt 442 |||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 tgtctggtgttatttcgctaattcgctctcaaaatgtggaagagaattt 349 >gi|28910469|gb|CB331454.1|CB331454 3529_1_26_1_F01.y_1 3529 - 2 mm ear tissue from Schmidt and Hake labs Zea mays cDNA, mRNA sequence Length = 558 Score = 367 bits (185), Expect = 1e-99 Identities = 310/353 (87%), Gaps = 9/353 (2%) Strand = Plus / Plus Query: 1 tacgaccgcgcgcaccgcccctacgcggctcccgcccccgccggtgagtacgaccgcccc 60 |||| ||||||| ||| |||||||||||| ||||||||||||| |||||||| |||||| Sbjct: 64 tacggccgcgcgtacctcccctacgcggccgccgcccccgccggcgagtacgatcgcccc 123 Query: 61 taccgcaacgaggtcgtgccctacggtgaccgccgcatcgacatcatcgtcaagccgccc 120 | |||||||||||||||||||||||| || |||||| |||||| | ||||||||||||| Sbjct: 124 tgccgcaacgaggtcgtgccctacggcgatcgccgcctcgacaccgtcgtcaagccgcca 183 Query: 121 gcgaggtcgcccccgcc---------ggtatccaccaggggcggcgggggaggggtgggg 171 || ||||||| |||| ||||||||||||| |||||||| ||||||||||| Sbjct: 184 gccgggtcgccggcgccgccgctgccggtatccaccaggagcggcgggagaggggtgggg 243 Query: 172 tcggcgtggtgcttcagcgatccggagatgaaaaggcggcggcgggtggccagctacaag 231 || |||||||| |||||||| |||||||||| ||||||||||||||||| ||||||||| Sbjct: 244 tcagcgtggtgtttcagcgacccggagatgaggaggcggcggcgggtggcgagctacaag 303 Query: 232 gcttactcggcggagggcaaagtcaaggcatcgttccccaggggattccgctggatcaag 291 || ||||||| ||||||||| |||||||||||||||| |||||| ||||||||||||||| Sbjct: 304 gcctactcggtggagggcaaggtcaaggcatcgttccgcagggggttccgctggatcaag 363 Query: 292 gccaagtgctccgagctcatccatggctgaacccggcatctcggtgaaattct 344 ||||||||||||||||||||||||||||||||| || || ||||||||||||| Sbjct: 364 gccaagtgctccgagctcatccatggctgaacctgggatatcggtgaaattct 416 Score = 67.9 bits (34), Expect = 1e-09 Identities = 37/38 (97%) Strand = Plus / Plus Query: 474 cccctggttataggaaaagaactcgatggagatctgct 511 ||||||||||||||||||||||||||||||| |||||| Sbjct: 518 cccctggttataggaaaagaactcgatggagctctgct 555 Score = 44.1 bits (22), Expect = 0.020 Identities = 28/30 (93%) Strand = Plus / Plus Query: 415 ttcgctctcaaaatgtggaagagaatttgt 444 ||||||| ||||||||||||||||| |||| Sbjct: 477 ttcgctcccaaaatgtggaagagaaattgt 506 >gi|29544090|gb|CB604470.1|CB604470 3529_1_63_1_G09.x_1 3529 - 2 mm ear tissue from Schmidt and Hake labs Zea mays cDNA, mRNA sequence Length = 533 Score = 367 bits (185), Expect = 1e-99 Identities = 310/353 (87%), Gaps = 9/353 (2%) Strand = Plus / Minus Query: 1 tacgaccgcgcgcaccgcccctacgcggctcccgcccccgccggtgagtacgaccgcccc 60 |||| ||||||| ||| |||||||||||| ||||||||||||| |||||||| |||||| Sbjct: 479 tacggccgcgcgtacctcccctacgcggccgccgcccccgccggcgagtacgatcgcccc 420 Query: 61 taccgcaacgaggtcgtgccctacggtgaccgccgcatcgacatcatcgtcaagccgccc 120 | |||||||||||||||||||||||| || |||||| |||||| | ||||||||||||| Sbjct: 419 tgccgcaacgaggtcgtgccctacggcgatcgccgcctcgacaccgtcgtcaagccgcca 360 Query: 121 gcgaggtcgcccccgcc---------ggtatccaccaggggcggcgggggaggggtgggg 171 || ||||||| |||| ||||||||||||| |||||||| ||||||||||| Sbjct: 359 gccgggtcgccggcgccgccgctgccggtatccaccaggagcggcgggagaggggtgggg 300 Query: 172 tcggcgtggtgcttcagcgatccggagatgaaaaggcggcggcgggtggccagctacaag 231 || |||||||| |||||||| |||||||||| ||||||||||||||||| ||||||||| Sbjct: 299 tcagcgtggtgtttcagcgacccggagatgaggaggcggcggcgggtggcgagctacaag 240 Query: 232 gcttactcggcggagggcaaagtcaaggcatcgttccccaggggattccgctggatcaag 291 || ||||||| ||||||||| |||||||||||||||| |||||| ||||||||||||||| Sbjct: 239 gcctactcggtggagggcaaggtcaaggcatcgttccgcagggggttccgctggatcaag 180 Query: 292 gccaagtgctccgagctcatccatggctgaacccggcatctcggtgaaattct 344 ||||||||||||||||||||||||||||||||| || || ||||||||||||| Sbjct: 179 gccaagtgctccgagctcatccatggctgaacctgggatatcggtgaaattct 127 Score = 50.1 bits (25), Expect = 3e-04 Identities = 25/25 (100%) Strand = Plus / Minus Query: 474 cccctggttataggaaaagaactcg 498 ||||||||||||||||||||||||| Sbjct: 25 cccctggttataggaaaagaactcg 1 Score = 44.1 bits (22), Expect = 0.020 Identities = 28/30 (93%) Strand = Plus / Minus Query: 415 ttcgctctcaaaatgtggaagagaatttgt 444 ||||||| ||||||||||||||||| |||| Sbjct: 66 ttcgctcccaaaatgtggaagagaaattgt 37 >gi|31405664|gb|CD484396.1|CD484396 3529_1_113_1_H06.y_1 3529 - 2 mm ear tissue from Schmidt and Hake labs Zea mays cDNA, mRNA sequence Length = 633 Score = 367 bits (185), Expect = 1e-99 Identities = 310/353 (87%), Gaps = 9/353 (2%) Strand = Plus / Plus Query: 1 tacgaccgcgcgcaccgcccctacgcggctcccgcccccgccggtgagtacgaccgcccc 60 |||| ||||||| ||| |||||||||||| ||||||||||||| |||||||| |||||| Sbjct: 62 tacggccgcgcgtacctcccctacgcggccgccgcccccgccggcgagtacgatcgcccc 121 Query: 61 taccgcaacgaggtcgtgccctacggtgaccgccgcatcgacatcatcgtcaagccgccc 120 | |||||||||||||||||||||||| || |||||| |||||| | ||||||||||||| Sbjct: 122 tgccgcaacgaggtcgtgccctacggcgatcgccgcctcgacaccgtcgtcaagccgcca 181 Query: 121 gcgaggtcgcccccgcc---------ggtatccaccaggggcggcgggggaggggtgggg 171 || ||||||| |||| ||||||||||||| |||||||| ||||||||||| Sbjct: 182 gccgggtcgccggcgccgccgctgccggtatccaccaggagcggcgggagaggggtgggg 241 Query: 172 tcggcgtggtgcttcagcgatccggagatgaaaaggcggcggcgggtggccagctacaag 231 || |||||||| |||||||| |||||||||| ||||||||||||||||| ||||||||| Sbjct: 242 tcagcgtggtgtttcagcgacccggagatgaggaggcggcggcgggtggcgagctacaag 301 Query: 232 gcttactcggcggagggcaaagtcaaggcatcgttccccaggggattccgctggatcaag 291 || ||||||| ||||||||| |||||||||||||||| |||||| ||||||||||||||| Sbjct: 302 gcctactcggtggagggcaaggtcaaggcatcgttccgcagggggttccgctggatcaag 361 Query: 292 gccaagtgctccgagctcatccatggctgaacccggcatctcggtgaaattct 344 ||||||||||||||||||||||||||||||||| || || ||||||||||||| Sbjct: 362 gccaagtgctccgagctcatccatggctgaacctgggatatcggtgaaattct 414 Score = 79.8 bits (40), Expect = 4e-13 Identities = 55/60 (91%) Strand = Plus / Plus Query: 474 cccctggttataggaaaagaactcgatggagatctgctgagattacttgtcgctacctgc 533 ||||||||||||||||||||||||||||||| |||||| || | |||||||||| ||||| Sbjct: 516 cccctggttataggaaaagaactcgatggagctctgctcaggtcacttgtcgctgcctgc 575 Score = 44.1 bits (22), Expect = 0.020 Identities = 28/30 (93%) Strand = Plus / Plus Query: 415 ttcgctctcaaaatgtggaagagaatttgt 444 ||||||| ||||||||||||||||| |||| Sbjct: 475 ttcgctcccaaaatgtggaagagaaattgt 504 >gi|31405663|gb|CD484395.1|CD484395 3529_1_113_1_H06.x_1 3529 - 2 mm ear tissue from Schmidt and Hake labs Zea mays cDNA, mRNA sequence Length = 447 Score = 355 bits (179), Expect = 4e-96 Identities = 304/347 (87%), Gaps = 9/347 (2%) Strand = Plus / Minus Query: 7 cgcgcgcaccgcccctacgcggctcccgcccccgccggtgagtacgaccgcccctaccgc 66 |||||| ||| ||| |||||||| ||||||||||||| |||||||| ||||||| |||| Sbjct: 406 cgcgcgtacctcccatacgcggccgccgcccccgccggcgagtacgatcgcccctgccgc 347 Query: 67 aacgaggtcgtgccctacggtgaccgccgcatcgacatcatcgtcaagccgcccgcgagg 126 |||||||||||||||||||| || |||||| |||||| | ||||||||||||| || || Sbjct: 346 aacgaggtcgtgccctacggcgatcgccgcctcgacaccgtcgtcaagccgccagccggg 287 Query: 127 tcgcccccgcc---------ggtatccaccaggggcggcgggggaggggtggggtcggcg 177 ||||| |||| ||||||||||||| |||||||| ||||||||||||| ||| Sbjct: 286 tcgccggcgccgccgctgccggtatccaccaggagcggcgggagaggggtggggtcagcg 227 Query: 178 tggtgcttcagcgatccggagatgaaaaggcggcggcgggtggccagctacaaggcttac 237 ||||| |||||||| |||||||||| ||||||||||||||||| ||||||||||| ||| Sbjct: 226 tggtgtttcagcgacccggagatgaggaggcggcggcgggtggcgagctacaaggcctac 167 Query: 238 tcggcggagggcaaagtcaaggcatcgttccccaggggattccgctggatcaaggccaag 297 |||| ||||||||| |||||||||||||||| |||||| ||||||||||||||||||||| Sbjct: 166 tcggtggagggcaaggtcaaggcatcgttccgcagggggttccgctggatcaaggccaag 107 Query: 298 tgctccgagctcatccatggctgaacccggcatctcggtgaaattct 344 ||||||||||||||||||||||||||| || || ||||||||||||| Sbjct: 106 tgctccgagctcatccatggctgaacctgggatatcggtgaaattct 60 >gi|29544573|gb|CB604953.1|CB604953 3529_1_63_1_G09.y_1 3529 - 2 mm ear tissue from Schmidt and Hake labs Zea mays cDNA, mRNA sequence Length = 265 Score = 129 bits (65), Expect = 4e-28 Identities = 100/109 (91%), Gaps = 2/109 (1%) Strand = Plus / Plus Query: 238 tcggcggagggcaaagtcaaggcatcg-ttccccaggggattcc-gctggatcaaggcca 295 |||| ||||||||| |||||||||||| |||| |||||| |||| ||||||||||||||| Sbjct: 1 tcggtggagggcaaggtcaaggcatcgnttccgcagggggttcccgctggatcaaggcca 60 Query: 296 agtgctccgagctcatccatggctgaacccggcatctcggtgaaattct 344 ||||||||||||||||||||||||||||| || || ||||||||||||| Sbjct: 61 agtgctccgagctcatccatggctgaacctgggatatcggtgaaattct 109 Score = 75.8 bits (38), Expect = 6e-12 Identities = 50/54 (92%) Strand = Plus / Plus Query: 474 cccctggttataggaaaagaactcgatggagatctgctgagattacttgtcgct 527 ||||||||||||||||||||||||||||||| |||||| || | |||||||||| Sbjct: 211 cccctggttataggaaaagaactcgatggagctctgctcaggtcacttgtcgct 264 Score = 44.1 bits (22), Expect = 0.020 Identities = 28/30 (93%) Strand = Plus / Plus Query: 415 ttcgctctcaaaatgtggaagagaatttgt 444 ||||||| ||||||||||||||||| |||| Sbjct: 170 ttcgctcccaaaatgtggaagagaaattgt 199 >gi|28910467|gb|CB331453.1|CB331453 3529_1_26_1_F01.x_1 3529 - 2 mm ear tissue from Schmidt and Hake labs Zea mays cDNA, mRNA sequence Length = 144 Score = 93.7 bits (47), Expect = 2e-17 Identities = 111/130 (85%), Gaps = 3/130 (2%) Strand = Plus / Minus Query: 135 gccggtatccaccaggggcggcgggggaggggtggggtcg-gcgtggtgcttc--agcga 191 |||||| ||| || || |||||||| ||||||||||||| |||||||| || |||| Sbjct: 130 gccggtttccccccggagcggcgggagaggggtggggtctagcgtggtgttttctagcgc 71 Query: 192 tccggagatgaaaaggcggcggcgggtggccagctacaaggcttactcggcggagggcaa 251 |||||||||| ||||||||||||||||| ||||||||||| ||||||| ||||||||| Sbjct: 70 cccggagatgaggaggcggcggcgggtggcgagctacaaggcctactcggtggagggcaa 11 Query: 252 agtcaaggca 261 ||||||||| Sbjct: 10 ggtcaaggca 1 >gi|4804342|gb|AI666208.1|AI666208 606006C06.x1 606 - Ear tissue cDNA library from Schmidt lab Zea mays cDNA, mRNA sequence Length = 560 Score = 87.7 bits (44), Expect = 2e-15 Identities = 74/84 (88%) Strand = Plus / Minus Query: 177 gtggtgcttcagcgatccggagatgaaaaggcggcggcgggtggccagctacaaggctta 236 ||||||| ||||||||||||||||||| ||||||| ||||||| ||||||||||| || Sbjct: 504 gtggtgcctcagcgatccggagatgaagcggcggcgaagggtggcgagctacaaggccta 445 Query: 237 ctcggcggagggcaaagtcaaggc 260 ||||| ||||||||| || ||||| Sbjct: 444 ctcggtggagggcaaggtgaaggc 421 >gi|22473430|gb|BU037910.1|BU037910 946143B05.y1 946 - tassel primordium prepared by Schmidt lab Zea mays cDNA, mRNA sequence Length = 673 Score = 87.7 bits (44), Expect = 2e-15 Identities = 74/84 (88%) Strand = Plus / Plus Query: 177 gtggtgcttcagcgatccggagatgaaaaggcggcggcgggtggccagctacaaggctta 236 ||||||| ||||||||||||||||||| ||||||| ||||||| ||||||||||| || Sbjct: 395 gtggtgcctcagcgatccggagatgaagcggcggcgaagggtggcgagctacaaggccta 454 Query: 237 ctcggcggagggcaaagtcaaggc 260 ||||| ||||||||| || ||||| Sbjct: 455 ctcggtggagggcaaggtgaaggc 478 >gi|29130573|gb|CB381277.1|CB381277 3529_1_45_1_C12.y_1 3529 - 2 mm ear tissue from Schmidt and Hake labs Zea mays cDNA, mRNA sequence Length = 587 Score = 87.7 bits (44), Expect = 2e-15 Identities = 74/84 (88%) Strand = Plus / Plus Query: 177 gtggtgcttcagcgatccggagatgaaaaggcggcggcgggtggccagctacaaggctta 236 ||||||| ||||||||||||||||||| ||||||| ||||||| ||||||||||| || Sbjct: 345 gtggtgcctcagcgatccggagatgaagcggcggcgaagggtggcgagctacaaggccta 404 Query: 237 ctcggcggagggcaaagtcaaggc 260 ||||| ||||||||| || ||||| Sbjct: 405 ctcggtggagggcaaggtgaaggc 428 >gi|29946221|gb|CB816040.1|CB816040 3529_1_79_1_A08.x_1 3529 - 2 mm ear tissue from Schmidt and Hake labs Zea mays cDNA, mRNA sequence Length = 617 Score = 87.7 bits (44), Expect = 2e-15 Identities = 74/84 (88%) Strand = Plus / Minus Query: 177 gtggtgcttcagcgatccggagatgaaaaggcggcggcgggtggccagctacaaggctta 236 ||||||| ||||||||||||||||||| ||||||| ||||||| ||||||||||| || Sbjct: 335 gtggtgcctcagcgatccggagatgaagcggcggcgaagggtggcgagctacaaggccta 276 Query: 237 ctcggcggagggcaaagtcaaggc 260 ||||| ||||||||| || ||||| Sbjct: 275 ctcggtggagggcaaggtgaaggc 252 >gi|29946970|gb|CB816417.1|CB816417 3529_1_79_1_A08.y_1 3529 - 2 mm ear tissue from Schmidt and Hake labs Zea mays cDNA, mRNA sequence Length = 630 Score = 87.7 bits (44), Expect = 2e-15 Identities = 74/84 (88%) Strand = Plus / Plus Query: 177 gtggtgcttcagcgatccggagatgaaaaggcggcggcgggtggccagctacaaggctta 236 ||||||| ||||||||||||||||||| ||||||| ||||||| ||||||||||| || Sbjct: 356 gtggtgcctcagcgatccggagatgaagcggcggcgaagggtggcgagctacaaggccta 415 Query: 237 ctcggcggagggcaaagtcaaggc 260 ||||| ||||||||| || ||||| Sbjct: 416 ctcggtggagggcaaggtgaaggc 439 >gi|50326115|gb|CO521241.1|CO521241 3530_1_140_1_D03.x_1 3530 - Full length cDNA library created by Invitrogen from multiple tissues Zea mays cDNA, mRNA sequence Length = 692 Score = 87.7 bits (44), Expect = 2e-15 Identities = 74/84 (88%) Strand = Plus / Minus Query: 177 gtggtgcttcagcgatccggagatgaaaaggcggcggcgggtggccagctacaaggctta 236 ||||||| ||||||||||||||||||| ||||||| ||||||| ||||||||||| || Sbjct: 357 gtggtgcctcagcgatccggagatgaagcggcggcgaagggtggcgagctacaaggccta 298 Query: 237 ctcggcggagggcaaagtcaaggc 260 ||||| ||||||||| || ||||| Sbjct: 297 ctcggtggagggcaaggtgaaggc 274 >gi|50326116|gb|CO521242.1|CO521242 3530_1_140_1_D03.y_1 3530 - Full length cDNA library created by Invitrogen from multiple tissues Zea mays cDNA, mRNA sequence Length = 734 Score = 87.7 bits (44), Expect = 2e-15 Identities = 74/84 (88%) Strand = Plus / Plus Query: 177 gtggtgcttcagcgatccggagatgaaaaggcggcggcgggtggccagctacaaggctta 236 ||||||| ||||||||||||||||||| ||||||| ||||||| ||||||||||| || Sbjct: 412 gtggtgcctcagcgatccggagatgaagcggcggcgaagggtggcgagctacaaggccta 471 Query: 237 ctcggcggagggcaaagtcaaggc 260 ||||| ||||||||| || ||||| Sbjct: 472 ctcggtggagggcaaggtgaaggc 495 >gi|60342927|gb|DN209900.1|DN209900 MEST891_E03.T7-1 UGA-ZmSAM-XZ2 Zea mays cDNA, mRNA sequence Length = 663 Score = 87.7 bits (44), Expect = 2e-15 Identities = 74/84 (88%) Strand = Plus / Minus Query: 177 gtggtgcttcagcgatccggagatgaaaaggcggcggcgggtggccagctacaaggctta 236 ||||||| ||||||||||||||||||| ||||||| ||||||| ||||||||||| || Sbjct: 587 gtggtgcctcagcgatccggagatgaagcggcggcgaagggtggcgagctacaaggccta 528 Query: 237 ctcggcggagggcaaagtcaaggc 260 ||||| ||||||||| || ||||| Sbjct: 527 ctcggtggagggcaaggtgaaggc 504 >gi|60354145|gb|DN221118.1|DN221118 MEST1107_D10.T7-1 UGA-ZmSAM-XZ2 Zea mays cDNA, mRNA sequence Length = 474 Score = 87.7 bits (44), Expect = 2e-15 Identities = 74/84 (88%) Strand = Plus / Minus Query: 177 gtggtgcttcagcgatccggagatgaaaaggcggcggcgggtggccagctacaaggctta 236 ||||||| ||||||||||||||||||| ||||||| ||||||| ||||||||||| || Sbjct: 350 gtggtgcctcagcgatccggagatgaagcggcggcgaagggtggcgagctacaaggccta 291 Query: 237 ctcggcggagggcaaagtcaaggc 260 ||||| ||||||||| || ||||| Sbjct: 290 ctcggtggagggcaaggtgaaggc 267 >gi|71321537|gb|DR797464.1|DR797464 ZM_BFb0019J07.f ZM_BFb Zea mays cDNA 3', mRNA sequence Length = 657 Score = 87.7 bits (44), Expect = 2e-15 Identities = 74/84 (88%) Strand = Plus / Minus Query: 177 gtggtgcttcagcgatccggagatgaaaaggcggcggcgggtggccagctacaaggctta 236 ||||||| ||||||||||||||||||| ||||||| ||||||| ||||||||||| || Sbjct: 369 gtggtgcctcagcgatccggagatgaagcggcggcgaagggtggcgagctacaaggccta 310 Query: 237 ctcggcggagggcaaagtcaaggc 260 ||||| ||||||||| || ||||| Sbjct: 309 ctcggtggagggcaaggtgaaggc 286 >gi|71321541|gb|DR797465.1|DR797465 ZM_BFb0019J07.r ZM_BFb Zea mays cDNA 5', mRNA sequence Length = 734 Score = 87.7 bits (44), Expect = 2e-15 Identities = 74/84 (88%) Strand = Plus / Plus Query: 177 gtggtgcttcagcgatccggagatgaaaaggcggcggcgggtggccagctacaaggctta 236 ||||||| ||||||||||||||||||| ||||||| ||||||| ||||||||||| || Sbjct: 487 gtggtgcctcagcgatccggagatgaagcggcggcgaagggtggcgagctacaaggccta 546 Query: 237 ctcggcggagggcaaagtcaaggc 260 ||||| ||||||||| || ||||| Sbjct: 547 ctcggaggagggcaaggtgaaggc 570 >gi|71445071|gb|DR826121.1|DR826121 ZM_BFb0068M04.f ZM_BFb Zea mays cDNA 3', mRNA sequence Length = 656 Score = 87.7 bits (44), Expect = 2e-15 Identities = 74/84 (88%) Strand = Plus / Minus Query: 177 gtggtgcttcagcgatccggagatgaaaaggcggcggcgggtggccagctacaaggctta 236 ||||||| ||||||||||||||||||| ||||||| ||||||| ||||||||||| || Sbjct: 515 gtggtgcctcagcgatccggagatgaagcggcggcgaagggtggcgagctacaaggccta 456 Query: 237 ctcggcggagggcaaagtcaaggc 260 ||||| ||||||||| || ||||| Sbjct: 455 ctcggtggagggcaaggtgaaggc 432 >gi|71445072|gb|DR826122.1|DR826122 ZM_BFb0068M04.r ZM_BFb Zea mays cDNA 5', mRNA sequence Length = 920 Score = 87.7 bits (44), Expect = 2e-15 Identities = 74/84 (88%) Strand = Plus / Plus Query: 177 gtggtgcttcagcgatccggagatgaaaaggcggcggcgggtggccagctacaaggctta 236 ||||||| ||||||||||||||||||| ||||||| ||||||| ||||||||||| || Sbjct: 406 gtggtgcctcagcgatccggagatgaagcggcggcgaagggtggcgagctacaaggccta 465 Query: 237 ctcggcggagggcaaagtcaaggc 260 ||||| ||||||||| || ||||| Sbjct: 466 ctcggtggagggcaaggtgaaggc 489 >gi|76285305|gb|DV024873.1|DV024873 ZM_BFb0145D18.f ZM_BFb Zea mays cDNA 3', mRNA sequence Length = 702 Score = 87.7 bits (44), Expect = 2e-15 Identities = 74/84 (88%) Strand = Plus / Minus Query: 177 gtggtgcttcagcgatccggagatgaaaaggcggcggcgggtggccagctacaaggctta 236 ||||||| ||||||||||||||||||| ||||||| ||||||| ||||||||||| || Sbjct: 564 gtggtgcctcagcgatccggagatgaagcggcggcgaagggtggcgagctacaaggccta 505 Query: 237 ctcggcggagggcaaagtcaaggc 260 ||||| ||||||||| || ||||| Sbjct: 504 ctcggtggagggcaaggtgaaggc 481 >gi|76285306|gb|DV024874.1|DV024874 ZM_BFb0145D18.r ZM_BFb Zea mays cDNA 5', mRNA sequence Length = 722 Score = 87.7 bits (44), Expect = 2e-15 Identities = 74/84 (88%) Strand = Plus / Plus Query: 177 gtggtgcttcagcgatccggagatgaaaaggcggcggcgggtggccagctacaaggctta 236 ||||||| ||||||||||||||||||| ||||||| ||||||| ||||||||||| || Sbjct: 247 gtggtgcctcagcgatccggagatgaagcggcggcgaagggtggcgagctacaaggccta 306 Query: 237 ctcggcggagggcaaagtcaaggc 260 ||||| ||||||||| || ||||| Sbjct: 307 ctcggtggagggcaaggtgaaggc 330 >gi|78024734|gb|DV493121.1|DV493121 1000081-A12.T7-1 UGI-Reseq Zea mays cDNA, mRNA sequence Length = 680 Score = 87.7 bits (44), Expect = 2e-15 Identities = 74/84 (88%) Strand = Plus / Minus Query: 177 gtggtgcttcagcgatccggagatgaaaaggcggcggcgggtggccagctacaaggctta 236 ||||||| ||||||||||||||||||| ||||||| ||||||| ||||||||||| || Sbjct: 504 gtggtgcctcagcgatccggagatgaagcggcggcgaagggtggcgagctacaaggccta 445 Query: 237 ctcggcggagggcaaagtcaaggc 260 ||||| ||||||||| || ||||| Sbjct: 444 ctcggtggagggcaaggtgaaggc 421 >gi|86474196|gb|DY240566.1|DY240566 ZM_BFb0260C12.f ZM_BFb Zea mays cDNA 3', mRNA sequence Length = 719 Score = 87.7 bits (44), Expect = 2e-15 Identities = 74/84 (88%) Strand = Plus / Minus Query: 177 gtggtgcttcagcgatccggagatgaaaaggcggcggcgggtggccagctacaaggctta 236 ||||||| ||||||||||||||||||| ||||||| ||||||| ||||||||||| || Sbjct: 587 gtggtgcctcagcgatccggagatgaagcggcggcgaagggtggcgagctacaaggccta 528 Query: 237 ctcggcggagggcaaagtcaaggc 260 ||||| ||||||||| || ||||| Sbjct: 527 ctcggtggagggcaaggtgaaggc 504 >gi|87155268|gb|DY400057.1|DY400057 V-946-4D-A09.Gal4-R UGV-Reseq Zea mays cDNA, mRNA sequence Length = 602 Score = 87.7 bits (44), Expect = 2e-15 Identities = 74/84 (88%) Strand = Plus / Plus Query: 177 gtggtgcttcagcgatccggagatgaaaaggcggcggcgggtggccagctacaaggctta 236 ||||||| ||||||||||||||||||| ||||||| ||||||| ||||||||||| || Sbjct: 436 gtggtgcctcagcgatccggagatgaagcggcggcgaagggtggcgagctacaaggccta 495 Query: 237 ctcggcggagggcaaagtcaaggc 260 ||||| ||||||||| || ||||| Sbjct: 496 ctcggtggagggcaaggtgaaggc 519 >gi|16919825|gb|BM074373.1|BM074373 MEST85-C11.T3 ISUM4-TN Zea mays cDNA clone MEST85-C11 3', mRNA sequence Length = 503 Score = 69.9 bits (35), Expect = 4e-10 Identities = 89/107 (83%) Strand = Plus / Minus Query: 194 cggagatgaaaaggcggcggcgggtggccagctacaaggcttactcggcggagggcaaag 253 |||||||||| ||||| |||||||||||||||||||||| ||| ||| ||| ||||| | Sbjct: 336 cggagatgaagcggcggaggcgggtggccagctacaaggcgtacgcggtggaaggcaagg 277 Query: 254 tcaaggcatcgttccccaggggattccgctggatcaaggccaagtgc 300 | ||||| || ||| | |||| |||| ||| |||||||||||||| Sbjct: 276 tgaaggcgtccatccgccggggcatccgatgggtcaaggccaagtgc 230 >gi|28986203|gb|CB351020.1|CB351020 MEST259-B08.univ ISUM5-RN Zea mays cDNA clone MEST259-B08 3', mRNA sequence Length = 553 Score = 69.9 bits (35), Expect = 4e-10 Identities = 89/107 (83%) Strand = Plus / Minus Query: 194 cggagatgaaaaggcggcggcgggtggccagctacaaggcttactcggcggagggcaaag 253 |||||||||| ||||| |||||||||||||||||||||| ||| ||| ||| ||||| | Sbjct: 360 cggagatgaagcggcggaggcgggtggccagctacaaggcgtacgcggtggaaggcaagg 301 Query: 254 tcaaggcatcgttccccaggggattccgctggatcaaggccaagtgc 300 | ||||| || ||| | |||| |||| ||| |||||||||||||| Sbjct: 300 tgaaggcgtccatccgccggggcatccgatgggtcaaggccaagtgc 254 >gi|5816327|gb|AI987243.1|AI987243 660002F02.x1 660 - Mixed stages of anther and pollen Zea mays cDNA, mRNA sequence Length = 441 Score = 50.1 bits (25), Expect = 3e-04 Identities = 55/65 (84%) Strand = Plus / Minus Query: 196 gagatgaaaaggcggcggcgggtggccagctacaaggcttactcggcggagggcaaagtc 255 |||||||| |||||||||||||||| |||||||||| ||| ||| || |||||| || Sbjct: 386 gagatgaagcggcggcggcgggtggcgggctacaaggcgtacgcggtggggggcaaggtg 327 Query: 256 aaggc 260 ||||| Sbjct: 326 aaggc 322 >gi|5928690|gb|AW055907.1|AW055907 660002F02.y1 660 - Mixed stages of anther and pollen Zea mays cDNA, mRNA sequence Length = 615 Score = 50.1 bits (25), Expect = 3e-04 Identities = 55/65 (84%) Strand = Plus / Plus Query: 196 gagatgaaaaggcggcggcgggtggccagctacaaggcttactcggcggagggcaaagtc 255 |||||||| |||||||||||||||| |||||||||| ||| ||| || |||||| || Sbjct: 152 gagatgaagcggcggcggcgggtggcgggctacaaggcgtacgcggtggggggcaaggtg 211 Query: 256 aaggc 260 ||||| Sbjct: 212 aaggc 216 >gi|21329891|gb|BQ485272.1|BQ485272 3524_1_12_1_D12.y_1 3524 - Mature pollen from Sheila McCormick's lab Zea mays cDNA, mRNA sequence Length = 468 Score = 50.1 bits (25), Expect = 3e-04 Identities = 55/65 (84%) Strand = Plus / Plus Query: 196 gagatgaaaaggcggcggcgggtggccagctacaaggcttactcggcggagggcaaagtc 255 |||||||| |||||||||||||||| |||||||||| ||| ||| || |||||| || Sbjct: 133 gagatgaagcggcggcggcgggtggcgggctacaaggcgtacgcggtggggggcaaggtg 192 Query: 256 aaggc 260 ||||| Sbjct: 193 aaggc 197 >gi|21329974|gb|BQ485355.1|BQ485355 3524_1_13_1_E10.y_1 3524 - Mature pollen from Sheila McCormick's lab Zea mays cDNA, mRNA sequence Length = 452 Score = 50.1 bits (25), Expect = 3e-04 Identities = 55/65 (84%) Strand = Plus / Plus Query: 196 gagatgaaaaggcggcggcgggtggccagctacaaggcttactcggcggagggcaaagtc 255 |||||||| |||||||||||||||| |||||||||| ||| ||| || |||||| || Sbjct: 151 gagatgaagcggcggcggcgggtggcgggctacaaggcgtacgcggtggggggcaaggtg 210 Query: 256 aaggc 260 ||||| Sbjct: 211 aaggc 215 >gi|21330088|gb|BQ485469.1|BQ485469 3524_1_14_1_H12.y_1 3524 - Mature pollen from Sheila McCormick's lab Zea mays cDNA, mRNA sequence Length = 513 Score = 50.1 bits (25), Expect = 3e-04 Identities = 55/65 (84%) Strand = Plus / Plus Query: 196 gagatgaaaaggcggcggcgggtggccagctacaaggcttactcggcggagggcaaagtc 255 |||||||| |||||||||||||||| |||||||||| ||| ||| || |||||| || Sbjct: 133 gagatgaagcggcggcggcgggtggcgggctacaaggcgtacgcggtggggggcaaggtg 192 Query: 256 aaggc 260 ||||| Sbjct: 193 aaggc 197 >gi|21390804|gb|BQ528853.1|BQ528853 3524_1_42_1_C01.y_1 3524 - Mature pollen from Sheila McCormick's lab Zea mays cDNA, mRNA sequence Length = 416 Score = 50.1 bits (25), Expect = 3e-04 Identities = 55/65 (84%) Strand = Plus / Plus Query: 196 gagatgaaaaggcggcggcgggtggccagctacaaggcttactcggcggagggcaaagtc 255 |||||||| |||||||||||||||| |||||||||| ||| ||| || |||||| || Sbjct: 152 gagatgaagcggcggcggcgggtggcgggctacaaggcgtacgcggtggggggcaaggtg 211 Query: 256 aaggc 260 ||||| Sbjct: 212 aaggc 216 >gi|21390913|gb|BQ528962.1|BQ528962 3524_1_43_1_E07.y_1 3524 - Mature pollen from Sheila McCormick's lab Zea mays cDNA, mRNA sequence Length = 514 Score = 50.1 bits (25), Expect = 3e-04 Identities = 55/65 (84%) Strand = Plus / Plus Query: 196 gagatgaaaaggcggcggcgggtggccagctacaaggcttactcggcggagggcaaagtc 255 |||||||| |||||||||||||||| |||||||||| ||| ||| || |||||| || Sbjct: 132 gagatgaagcggcggcggcgggtggcgggctacaaggcgtacgcggtggggggcaaggtg 191 Query: 256 aaggc 260 ||||| Sbjct: 192 aaggc 196 >gi|21480892|gb|BQ577575.1|BQ577575 3524_1_38_1_G08.y_1 3524 - Mature pollen from Sheila McCormick's lab Zea mays cDNA, mRNA sequence Length = 457 Score = 50.1 bits (25), Expect = 3e-04 Identities = 55/65 (84%) Strand = Plus / Plus Query: 196 gagatgaaaaggcggcggcgggtggccagctacaaggcttactcggcggagggcaaagtc 255 |||||||| |||||||||||||||| |||||||||| ||| ||| || |||||| || Sbjct: 151 gagatgaagcggcggcggcgggtggcgggctacaaggcgtacgcggtggggggcaaggtg 210 Query: 256 aaggc 260 ||||| Sbjct: 211 aaggc 215 >gi|21481175|gb|BQ577858.1|BQ577858 3524_1_47_1_B03.y_1 3524 - Mature pollen from Sheila McCormick's lab Zea mays cDNA, mRNA sequence Length = 448 Score = 50.1 bits (25), Expect = 3e-04 Identities = 55/65 (84%) Strand = Plus / Plus Query: 196 gagatgaaaaggcggcggcgggtggccagctacaaggcttactcggcggagggcaaagtc 255 |||||||| |||||||||||||||| |||||||||| ||| ||| || |||||| || Sbjct: 135 gagatgaagcggcggcggcgggtggcgggctacaaggcgtacgcggtggggggcaaggtg 194 Query: 256 aaggc 260 ||||| Sbjct: 195 aaggc 199 >gi|21481350|gb|BQ578033.1|BQ578033 3524_1_52_1_C04.y_1 3524 - Mature pollen from Sheila McCormick's lab Zea mays cDNA, mRNA sequence Length = 496 Score = 50.1 bits (25), Expect = 3e-04 Identities = 55/65 (84%) Strand = Plus / Plus Query: 196 gagatgaaaaggcggcggcgggtggccagctacaaggcttactcggcggagggcaaagtc 255 |||||||| |||||||||||||||| |||||||||| ||| ||| || |||||| || Sbjct: 132 gagatgaagcggcggcggcgggtggcgggctacaaggcgtacgcggtggggggcaaggtg 191 Query: 256 aaggc 260 ||||| Sbjct: 192 aaggc 196 >gi|22545202|gb|BU097561.1|BU097561 3524_1_51_1_D05.y_1 3524 - Mature pollen from Sheila McCormick's lab Zea mays cDNA, mRNA sequence Length = 457 Score = 50.1 bits (25), Expect = 3e-04 Identities = 55/65 (84%) Strand = Plus / Plus Query: 196 gagatgaaaaggcggcggcgggtggccagctacaaggcttactcggcggagggcaaagtc 255 |||||||| |||||||||||||||| |||||||||| ||| ||| || |||||| || Sbjct: 108 gagatgaagcggcggcggcgggtggcgggctacaaggcgtacgcggtggggggcaaggtg 167 Query: 256 aaggc 260 ||||| Sbjct: 168 aaggc 172 >gi|22545259|gb|BU097618.1|BU097618 3524_1_19_1_A11.y_1 3524 - Mature pollen from Sheila McCormick's lab Zea mays cDNA, mRNA sequence Length = 378 Score = 50.1 bits (25), Expect = 3e-04 Identities = 55/65 (84%) Strand = Plus / Plus Query: 196 gagatgaaaaggcggcggcgggtggccagctacaaggcttactcggcggagggcaaagtc 255 |||||||| |||||||||||||||| |||||||||| ||| ||| || |||||| || Sbjct: 133 gagatgaagcggcggcggcgggtggcgggctacaaggcgtacgcggtggggggcaaggtg 192 Query: 256 aaggc 260 ||||| Sbjct: 193 aaggc 197 >gi|26455139|gb|CA826722.1|CA826722 1114004A11.y1 1114 - Unigene IV from Maize Genome Project Zea mays cDNA, mRNA sequence Length = 515 Score = 50.1 bits (25), Expect = 3e-04 Identities = 55/65 (84%) Strand = Plus / Plus Query: 196 gagatgaaaaggcggcggcgggtggccagctacaaggcttactcggcggagggcaaagtc 255 |||||||| |||||||||||||||| |||||||||| ||| ||| || |||||| || Sbjct: 133 gagatgaagcggcggcggcgggtggcgggctacaaggcgtacgcggtggggggcaaggtg 192 Query: 256 aaggc 260 ||||| Sbjct: 193 aaggc 197 >gi|26455290|gb|CA826873.1|CA826873 1114006C01.y1 1114 - Unigene IV from Maize Genome Project Zea mays cDNA, mRNA sequence Length = 549 Score = 50.1 bits (25), Expect = 3e-04 Identities = 55/65 (84%) Strand = Plus / Plus Query: 196 gagatgaaaaggcggcggcgggtggccagctacaaggcttactcggcggagggcaaagtc 255 |||||||| |||||||||||||||| |||||||||| ||| ||| || |||||| || Sbjct: 173 gagatgaagcggcggcggcgggtggcgggctacaaggcgtacgcggtggggggcaaggtg 232 Query: 256 aaggc 260 ||||| Sbjct: 233 aaggc 237 >gi|26455498|gb|CA827081.1|CA827081 1114009F02.y1 1114 - Unigene IV from Maize Genome Project Zea mays cDNA, mRNA sequence Length = 513 Score = 50.1 bits (25), Expect = 3e-04 Identities = 55/65 (84%) Strand = Plus / Plus Query: 196 gagatgaaaaggcggcggcgggtggccagctacaaggcttactcggcggagggcaaagtc 255 |||||||| |||||||||||||||| |||||||||| ||| ||| || |||||| || Sbjct: 133 gagatgaagcggcggcggcgggtggcgggctacaaggcgtacgcggtggggggcaaggtg 192 Query: 256 aaggc 260 ||||| Sbjct: 193 aaggc 197 >gi|32869992|gb|CF009674.1|CF009674 QBJ21f09.xg QBJ Zea mays cDNA clone QBJ21f09, mRNA sequence Length = 533 Score = 50.1 bits (25), Expect = 3e-04 Identities = 55/65 (84%) Strand = Plus / Plus Query: 196 gagatgaaaaggcggcggcgggtggccagctacaaggcttactcggcggagggcaaagtc 255 |||||||| |||||||||||||||| |||||||||| ||| ||| || |||||| || Sbjct: 185 gagatgaagcggcggcggcgggtggcgggctacaaggcgtacgcggtggggggcaaggtg 244 Query: 256 aaggc 260 ||||| Sbjct: 245 aaggc 249 >gi|87154596|gb|DY399385.1|DY399385 IV-3524-3A-F02.T3 UGIV-3524-Reseq Zea mays cDNA, mRNA sequence Length = 516 Score = 50.1 bits (25), Expect = 3e-04 Identities = 55/65 (84%) Strand = Plus / Plus Query: 196 gagatgaaaaggcggcggcgggtggccagctacaaggcttactcggcggagggcaaagtc 255 |||||||| |||||||||||||||| |||||||||| ||| ||| || |||||| || Sbjct: 134 gagatgaagcggcggcggcgggtggcgggctacaaggcgtacgcggtggggggcaaggtg 193 Query: 256 aaggc 260 ||||| Sbjct: 194 aaggc 198 >gi|87154711|gb|DY399500.1|DY399500 IV-3524-1C-A11.T3 UGIV-3524-Reseq Zea mays cDNA, mRNA sequence Length = 516 Score = 50.1 bits (25), Expect = 3e-04 Identities = 55/65 (84%) Strand = Plus / Plus Query: 196 gagatgaaaaggcggcggcgggtggccagctacaaggcttactcggcggagggcaaagtc 255 |||||||| |||||||||||||||| |||||||||| ||| ||| || |||||| || Sbjct: 134 gagatgaagcggcggcggcgggtggcgggctacaaggcgtacgcggtggggggcaaggtg 193 Query: 256 aaggc 260 ||||| Sbjct: 194 aaggc 198 >gi|87154778|gb|DY399567.1|DY399567 IV-3524-1C-A11.T7-1 UGIV-3524-Reseq Zea mays cDNA, mRNA sequence Length = 512 Score = 50.1 bits (25), Expect = 3e-04 Identities = 55/65 (84%) Strand = Plus / Minus Query: 196 gagatgaaaaggcggcggcgggtggccagctacaaggcttactcggcggagggcaaagtc 255 |||||||| |||||||||||||||| |||||||||| ||| ||| || |||||| || Sbjct: 379 gagatgaagcggcggcggcgggtggcgggctacaaggcgtacgcggtggggggcaaggtg 320 Query: 256 aaggc 260 ||||| Sbjct: 319 aaggc 315 >gi|87155144|gb|DY399933.1|DY399933 IV-3524-3A-F02.T7-1 UGIV-3524-Reseq Zea mays cDNA, mRNA sequence Length = 512 Score = 50.1 bits (25), Expect = 3e-04 Identities = 55/65 (84%) Strand = Plus / Minus Query: 196 gagatgaaaaggcggcggcgggtggccagctacaaggcttactcggcggagggcaaagtc 255 |||||||| |||||||||||||||| |||||||||| ||| ||| || |||||| || Sbjct: 379 gagatgaagcggcggcggcgggtggcgggctacaaggcgtacgcggtggggggcaaggtg 320 Query: 256 aaggc 260 ||||| Sbjct: 319 aaggc 315 >gi|21211228|gb|AY108150.1| Zea mays PCO117613 mRNA sequence Length = 720 Score = 50.1 bits (25), Expect = 3e-04 Identities = 55/65 (84%) Strand = Plus / Plus Query: 196 gagatgaaaaggcggcggcgggtggccagctacaaggcttactcggcggagggcaaagtc 255 |||||||| |||||||||||||||| |||||||||| ||| ||| || |||||| || Sbjct: 317 gagatgaagcggcggcggcgggtggcgggctacaaggcgtacgcggtggggggcaaggtg 376 Query: 256 aaggc 260 ||||| Sbjct: 377 aaggc 381 >gi|21211228|gb|AY108150.1| Zea mays PCO117613 mRNA sequence Length = 720 Score = 50.1 bits (25), Expect = 3e-04 Identities = 55/65 (84%) Strand = Plus / Plus Query: 196 gagatgaaaaggcggcggcgggtggccagctacaaggcttactcggcggagggcaaagtc 255 |||||||| |||||||||||||||| |||||||||| ||| ||| || |||||| || Sbjct: 317 gagatgaagcggcggcggcgggtggcgggctacaaggcgtacgcggtggggggcaaggtg 376 Query: 256 aaggc 260 ||||| Sbjct: 377 aaggc 381 >gi|87154337|gb|DY399126.1|DY399126 IV-3524-2B-C01.T3 UGIV-3524-Reseq Zea mays cDNA, mRNA sequence Length = 240 Score = 44.1 bits (22), Expect = 0.020 Identities = 34/38 (89%) Strand = Plus / Plus Query: 196 gagatgaaaaggcggcggcgggtggccagctacaaggc 233 |||||||| |||||||||||||||| |||||||||| Sbjct: 173 gagatgaagcggcggcggcgggtggcgggctacaaggc 210 >gi|32869482|gb|CF009164.1|CF009164 QBJ18d08.xg QBJ Zea mays cDNA clone QBJ18d08, mRNA sequence Length = 443 Score = 40.1 bits (20), Expect = 0.32 Identities = 44/52 (84%) Strand = Plus / Plus Query: 209 ggcggcgggtggccagctacaaggcttactcggcggagggcaaagtcaaggc 260 ||||||||||||| |||||||||| ||| ||| || |||||| || ||||| Sbjct: 162 ggcggcgggtggcgggctacaaggcgtacgcggtggggggcaaggtgaaggc 213 >gi|71433972|gb|DR815022.1|DR815022 ZM_BFb0044P10.r ZM_BFb Zea mays cDNA 5', mRNA sequence Length = 826 Score = 40.1 bits (20), Expect = 0.32 Identities = 23/24 (95%) Strand = Plus / Plus Query: 281 gctggatcaaggccaagtgctccg 304 |||||||||||| ||||||||||| Sbjct: 595 gctggatcaagggcaagtgctccg 618 >gi|76285125|gb|DV024693.1|DV024693 ZM_BFb0144P19.f ZM_BFb Zea mays cDNA 3', mRNA sequence Length = 510 Score = 40.1 bits (20), Expect = 0.32 Identities = 23/24 (95%) Strand = Plus / Minus Query: 281 gctggatcaaggccaagtgctccg 304 |||||||||||| ||||||||||| Sbjct: 418 gctggatcaagggcaagtgctccg 395 >gi|76285126|gb|DV024694.1|DV024694 ZM_BFb0144P19.r ZM_BFb Zea mays cDNA 5', mRNA sequence Length = 510 Score = 40.1 bits (20), Expect = 0.32 Identities = 23/24 (95%) Strand = Plus / Plus Query: 281 gctggatcaaggccaagtgctccg 304 |||||||||||| ||||||||||| Sbjct: 93 gctggatcaagggcaagtgctccg 116 >gi|78077861|gb|DV506288.1|DV506288 ZM_BFb0183P06.r ZM_BFb Zea mays cDNA 5', mRNA sequence Length = 742 Score = 40.1 bits (20), Expect = 0.32 Identities = 20/20 (100%) Strand = Plus / Minus Query: 147 caggggcggcgggggagggg 166 |||||||||||||||||||| Sbjct: 202 caggggcggcgggggagggg 183 >gi|78081992|gb|DV510404.1|DV510404 ZM_BFb0190A06.r ZM_BFb Zea mays cDNA 5', mRNA sequence Length = 428 Score = 40.1 bits (20), Expect = 0.32 Identities = 23/24 (95%) Strand = Plus / Plus Query: 281 gctggatcaaggccaagtgctccg 304 |||||||||||| ||||||||||| Sbjct: 11 gctggatcaagggcaagtgctccg 34 >gi|78090243|gb|DV518617.1|DV518617 ZM_BFb0202L05.r ZM_BFb Zea mays cDNA 5', mRNA sequence Length = 703 Score = 40.1 bits (20), Expect = 0.32 Identities = 23/24 (95%) Strand = Plus / Plus Query: 281 gctggatcaaggccaagtgctccg 304 |||||||||||| ||||||||||| Sbjct: 581 gctggatcaagggcaagtgctccg 604 >gi|78125473|gb|DV543857.1|DV543857 ZM_BFb0240D01.r ZM_BFb Zea mays cDNA 5', mRNA sequence Length = 652 Score = 38.2 bits (19), Expect = 1.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 153 cggcgggggaggggtgggg 171 ||||||||||||||||||| Sbjct: 222 cggcgggggaggggtgggg 240 >gi|58082296|gb|AC155434.2| Zea mays strain B73 clone ZMMBBb0259M03, *** SEQUENCING IN PROGRESS ***, 11 unordered pieces Length = 139520 Score = 38.2 bits (19), Expect = 1.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 554 caaaaaatgtttgaagaag 572 ||||||||||||||||||| Sbjct: 77874 caaaaaatgtttgaagaag 77892 >gi|8273187|gb|BE012277.1|BE012277 945016G03.Y2 945 - Mixed adult tissues from Walbot lab, same as 707 (SK) Zea mays cDNA, mRNA sequence Length = 293 Score = 36.2 bits (18), Expect = 4.9 Identities = 21/22 (95%) Strand = Plus / Plus Query: 282 ctggatcaaggccaagtgctcc 303 ||||||||||| |||||||||| Sbjct: 98 ctggatcaagggcaagtgctcc 119 >gi|18176760|gb|BM351693.1|BM351693 MEST344-H10.T3 ISUM5-RN Zea mays cDNA clone MEST344-H10 3', mRNA sequence Length = 671 Score = 36.2 bits (18), Expect = 4.9 Identities = 18/18 (100%) Strand = Plus / Minus Query: 288 caaggccaagtgctccga 305 |||||||||||||||||| Sbjct: 665 caaggccaagtgctccga 648 >gi|31360663|gb|CD445020.1|CD445020 EL01N0446G01.b Endosperm_4 Zea mays cDNA, mRNA sequence Length = 613 Score = 36.2 bits (18), Expect = 4.9 Identities = 21/22 (95%) Strand = Plus / Minus Query: 458 agagaactttgttgcccccctg 479 |||||||||||||| ||||||| Sbjct: 191 agagaactttgttgtccccctg 170 >gi|37424527|gb|CF649996.1|CF649996 3530_1_80_1_F06.x_1 3530 - Full length cDNA library created by Invitrogen from multiple tissues Zea mays cDNA, mRNA sequence Length = 362 Score = 36.2 bits (18), Expect = 4.9 Identities = 18/18 (100%) Strand = Plus / Minus Query: 301 tccgagctcatccatggc 318 |||||||||||||||||| Sbjct: 232 tccgagctcatccatggc 215 >gi|67028026|gb|CO456775.1|CO456775 MZCCS20007F10.g Maize Endosperm cDNA Library Zea mays cDNA, mRNA sequence Length = 840 Score = 36.2 bits (18), Expect = 4.9 Identities = 18/18 (100%) Strand = Plus / Minus Query: 197 agatgaaaaggcggcggc 214 |||||||||||||||||| Sbjct: 270 agatgaaaaggcggcggc 253 >gi|76280829|gb|DV020397.1|DV020397 ZM_BFb0138L08.r ZM_BFb Zea mays cDNA 5', mRNA sequence Length = 846 Score = 36.2 bits (18), Expect = 4.9 Identities = 18/18 (100%) Strand = Plus / Minus Query: 301 tccgagctcatccatggc 318 |||||||||||||||||| Sbjct: 308 tccgagctcatccatggc 291 >gi|78090103|gb|DV518477.1|DV518477 ZM_BFb0202I01.r ZM_BFb Zea mays cDNA 5', mRNA sequence Length = 778 Score = 36.2 bits (18), Expect = 4.9 Identities = 18/18 (100%) Strand = Plus / Minus Query: 301 tccgagctcatccatggc 318 |||||||||||||||||| Sbjct: 308 tccgagctcatccatggc 291 >gi|78093088|gb|DV521462.1|DV521462 ZM_BFb0206M12.r ZM_BFb Zea mays cDNA 5', mRNA sequence Length = 818 Score = 36.2 bits (18), Expect = 4.9 Identities = 18/18 (100%) Strand = Plus / Minus Query: 301 tccgagctcatccatggc 318 |||||||||||||||||| Sbjct: 308 tccgagctcatccatggc 291 >gi|78112295|gb|DV530689.1|DV530689 ZM_BFb0220I24.r ZM_BFb Zea mays cDNA 5', mRNA sequence Length = 657 Score = 36.2 bits (18), Expect = 4.9 Identities = 18/18 (100%) Strand = Plus / Minus Query: 301 tccgagctcatccatggc 318 |||||||||||||||||| Sbjct: 262 tccgagctcatccatggc 245 >gi|86471477|gb|DY237847.1|DY237847 ZM_BFb0255E10.r ZM_BFb Zea mays cDNA 5', mRNA sequence Length = 469 Score = 36.2 bits (18), Expect = 4.9 Identities = 18/18 (100%) Strand = Plus / Minus Query: 24 cgcggctcccgcccccgc 41 |||||||||||||||||| Sbjct: 120 cgcggctcccgcccccgc 103 >gi|91982820|gb|AC185276.1| Zea mays chromosome UNK clone CH201-322M15; ZMMBBc0322M15, *** SEQUENCING IN PROGRESS ***, 15 unordered pieces Length = 163620 Score = 36.2 bits (18), Expect = 4.9 Identities = 18/18 (100%) Strand = Plus / Plus Query: 556 aaaaatgtttgaagaaga 573 |||||||||||||||||| Sbjct: 85283 aaaaatgtttgaagaaga 85300 >gi|58082345|gb|AC155485.2| Zea mays strain B73 clone ZMMBBc0011I08, *** SEQUENCING IN PROGRESS ***, 13 unordered pieces Length = 118540 Score = 36.2 bits (18), Expect = 4.9 Identities = 18/18 (100%) Strand = Plus / Minus Query: 25 gcggctcccgcccccgcc 42 |||||||||||||||||| Sbjct: 63332 gcggctcccgcccccgcc 63315 Database: mais_NCBI.fasta Posted date: Apr 26, 2006 11:51 AM Number of letters in database: 669,372,029 Number of sequences in database: 836,351 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 331,679 Number of Sequences: 836351 Number of extensions: 331679 Number of successful extensions: 24035 Number of sequences better than 10.0: 81 Number of HSP's better than 10.0 without gapping: 81 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 23902 Number of HSP's gapped (non-prelim): 121 length of query: 606 length of database: 669,372,029 effective HSP length: 19 effective length of query: 587 effective length of database: 653,481,360 effective search space: 383593558320 effective search space used: 383593558320 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 18 (36.2 bits)