BLASTX 2.2.6 [Apr-09-2003]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= QAF18e02.yg.3.1
(702 letters)
Database: swall
1,381,838 sequences; 439,479,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sptr|Q7XC99|Q7XC99 Putative transcription regulatory protein. 274 7e-73
sptr|Q94LQ9|Q94LQ9 Putative transcription regulatory protein. 274 7e-73
sptr|Q84WS9|Q84WS9 Hypothetical protein (Fragment). 180 1e-44
sptr|Q86IS0|Q86IS0 Similar to Dictyostelium discoideum (Slime mo... 79 5e-14
sptr|Q9Y2L0|Q9Y2L0 Hypothetical protein KIAA1007 (Fragment). 74 1e-12
sptr|Q9UFR8|Q9UFR8 Hypothetical protein (Fragment). 74 1e-12
sptr|Q8TB53|Q8TB53 Similar to KIAA1007 protein (Fragment). 74 1e-12
sptr|Q8K3D8|Q8K3D8 Hypothetical protein. 74 2e-12
sptrnew|BAC98068|BAC98068 MKIAA1007 protein (Fragment). 74 2e-12
sptr|Q7Z3K2|Q7Z3K2 Hypothetical protein DKFZp686K24111. 73 3e-12
sptrnew|CAA42248|CAA42248 Nuclear protein. 65 9e-10
sw|P25655|NOT1_YEAST General negative regulator of transcription... 65 9e-10
sptrnew|AAH00779|AAH00779 KIAA1007 protein (Fragment). 63 4e-09
sptr|Q20937|Q20937 Hypothetical protein. 62 1e-08
sptr|P87112|P87112 Putative CCR4-Not complex. 54 2e-06
sptr|Q8BXB2|Q8BXB2 Adrenal gland protein AD-005 homolog. 54 3e-06
sptr|Q7PW82|Q7PW82 ENSANGP00000016536 (Fragment). 52 6e-06
sptr|Q8ILS4|Q8ILS4 Hypothetical protein. 49 7e-05
sptr|Q7YYI7|Q7YYI7 Putative transcription regulatory protein, po... 48 1e-04
sptr|Q7RPM6|Q7RPM6 Hypothetical protein (Fragment). 48 1e-04
sptr|Q8IH39|Q8IH39 GH26494p (Fragment). 44 0.002
sptr|Q9V591|Q9V591 CG1884 protein. 44 0.002
sptr|Q8MKU3|Q8MKU3 CG1884-PA. 44 0.003
sptr|Q95TG6|Q95TG6 SD07194p. 44 0.003
sptr|Q7RK48|Q7RK48 Similar to KIAA1007 protein-related (Fragment). 41 0.018
sptr|Q8IIW4|Q8IIW4 Hypothetical protein, conserved. 41 0.018
sptr|O18363|O18363 Knockout. 34 2.2
sptr|Q7N5J2|Q7N5J2 FliZ protein. 34 2.2
sptr|Q9VP79|Q9VP79 KO gene product. 34 2.2
sptr|Q7RE57|Q7RE57 Hypothetical protein. 33 2.9
>sptr|Q7XC99|Q7XC99 Putative transcription regulatory protein.
Length = 2363
Score = 274 bits (701), Expect = 7e-73
Identities = 147/274 (53%), Positives = 184/274 (67%), Gaps = 42/274 (15%)
Frame = +3
Query: 6 YNVHLTKLIDGGRNKVATEFAMSLVQTLITQDPVSISELHNVVDAISK------------ 149
YNVHL K+IDGGRNK ATEFA+SLVQTLITQ+ +SI+E++NVVDA+SK
Sbjct: 1717 YNVHLAKIIDGGRNKAATEFAISLVQTLITQESISIAEVYNVVDALSKLAIRPSSPESLQ 1776
Query: 150 ------------------------VLAAQ--VNKEESIANETTLIDP----NQVAVLFSE 239
VL+ + VNKEE+ AN+ D +VAV FSE
Sbjct: 1777 QLIEIARSFASVKDENIRQSRDKKVLSGRPLVNKEENNANDVAFTDAVGFQEKVAVSFSE 1836
Query: 240 WCQICSHVNASDAIYSRFVTQLEQDSLLNGDDISERFFHILTELAVTHSLVSEQIVAXXX 419
WC IC H D+ Y+ ++ +L+QD LL GDD+++RF+HILTELAV HS+VSEQ+VA
Sbjct: 1837 WCNICDHPTMGDSAYTHYIVKLQQDGLLKGDDLTDRFYHILTELAVAHSVVSEQVVAPGG 1896
Query: 420 XXXXXXXXXHISYFSIDSYAKLVVMVLKYSSVEITPNKGSILSKIISVTVRTIQKDAEEK 599
ISYFSIDSY+KLV +V+KYSSV+I P+KGS+ +KI+SV VR IQ+DAEEK
Sbjct: 1897 ISQQPTQQLQISYFSIDSYSKLVALVVKYSSVDIGPSKGSLFNKILSVIVRIIQRDAEEK 1956
Query: 600 KASFNPRPYFRLXINWLYDLTTTDGHHDGSNFQV 701
K SFNPRPYFRL IN L +LTT+D HHD +NFQV
Sbjct: 1957 KVSFNPRPYFRLFINLLSELTTSDLHHDSANFQV 1990
>sptr|Q94LQ9|Q94LQ9 Putative transcription regulatory protein.
Length = 2363
Score = 274 bits (701), Expect = 7e-73
Identities = 147/274 (53%), Positives = 184/274 (67%), Gaps = 42/274 (15%)
Frame = +3
Query: 6 YNVHLTKLIDGGRNKVATEFAMSLVQTLITQDPVSISELHNVVDAISK------------ 149
YNVHL K+IDGGRNK ATEFA+SLVQTLITQ+ +SI+E++NVVDA+SK
Sbjct: 1717 YNVHLAKIIDGGRNKAATEFAISLVQTLITQESISIAEVYNVVDALSKLAIRPSSPESLQ 1776
Query: 150 ------------------------VLAAQ--VNKEESIANETTLIDP----NQVAVLFSE 239
VL+ + VNKEE+ AN+ D +VAV FSE
Sbjct: 1777 QLIEIARSFASVKDENIRQSRDKKVLSGRPLVNKEENNANDVAFTDAVGFQEKVAVSFSE 1836
Query: 240 WCQICSHVNASDAIYSRFVTQLEQDSLLNGDDISERFFHILTELAVTHSLVSEQIVAXXX 419
WC IC H D+ Y+ ++ +L+QD LL GDD+++RF+HILTELAV HS+VSEQ+VA
Sbjct: 1837 WCNICDHPTMGDSAYTHYIVKLQQDGLLKGDDLTDRFYHILTELAVAHSVVSEQVVAPGG 1896
Query: 420 XXXXXXXXXHISYFSIDSYAKLVVMVLKYSSVEITPNKGSILSKIISVTVRTIQKDAEEK 599
ISYFSIDSY+KLV +V+KYSSV+I P+KGS+ +KI+SV VR IQ+DAEEK
Sbjct: 1897 ISQQPTQQLQISYFSIDSYSKLVALVVKYSSVDIGPSKGSLFNKILSVIVRIIQRDAEEK 1956
Query: 600 KASFNPRPYFRLXINWLYDLTTTDGHHDGSNFQV 701
K SFNPRPYFRL IN L +LTT+D HHD +NFQV
Sbjct: 1957 KVSFNPRPYFRLFINLLSELTTSDLHHDSANFQV 1990
>sptr|Q84WS9|Q84WS9 Hypothetical protein (Fragment).
Length = 682
Score = 180 bits (457), Expect = 1e-44
Identities = 110/281 (39%), Positives = 151/281 (53%), Gaps = 49/281 (17%)
Frame = +3
Query: 6 YNVHLTKLIDGGRNKVATEFAMSLVQTLITQDPVSISELHNVVDAISKVLAAQ------- 164
YNVH+ K +DGGRNK AT+FA+SL+Q+L+T++ ISELH++VDA++K+ +
Sbjct: 38 YNVHMAKHLDGGRNKTATDFAISLLQSLVTEESSVISELHSLVDALAKLASKSGSSESLQ 97
Query: 165 --------------------------------------VNKEESIANETTLIDP----NQ 218
N EES + + DP N+
Sbjct: 98 QLIDIIRNPVTNTAGLSDSSTGNDNNDRQKDEKVACNTTNTEESTSLDYVESDPAGFQNR 157
Query: 219 VAVLFSEWCQICSHVNASDAIYSRFVTQLEQDSLLNGDDISERFFHILTELAVTHSLVSE 398
V+ LF W QIC A++ S++V L Q LL GDD +E FF IL EL+V H + SE
Sbjct: 158 VSTLFKNWYQICELPGANETACSQYVLHLHQTGLLKGDDTTESFFRILLELSVAHCISSE 217
Query: 399 QIVAXXXXXXXXXXXXHISYFSIDSYAKLVVMVLKYSSVEITPNKGSILSKIISVTVRTI 578
I + S+ ID YAKLV +LKY + + ++ +LS+I++ TVR I
Sbjct: 218 DINSGAVQSPQQPQSP--SFLIIDMYAKLVFSILKYFPEQESSSRLFLLSEIMADTVRFI 275
Query: 579 QKDAEEKKASFNPRPYFRLXINWLYDLTTTDGHHDGSNFQV 701
QKDAE+KK S N +PYFRL INWL DL + D DG+NFQV
Sbjct: 276 QKDAEDKKTSLNSKPYFRLFINWLLDLCSLDPGTDGANFQV 316
>sptr|Q86IS0|Q86IS0 Similar to Dictyostelium discoideum (Slime mold).
ORF DG1040.
Length = 2526
Score = 79.3 bits (194), Expect = 5e-14
Identities = 63/247 (25%), Positives = 115/247 (46%), Gaps = 25/247 (10%)
Frame = +3
Query: 6 YNVHLTKLIDGGRNKVATEFAMSLVQ-TLITQDPVSISELHNVVDAISKVLAAQVN---- 170
Y++ L+K++ R+ +FA+SL++ L+ + ++SE + D + K+ + +
Sbjct: 1934 YDLALSKMMIDSRSAPPIDFAISLLRFCLVENNYANLSEFPSTFDLLQKISSRSPSEMLA 1993
Query: 171 ----------KEES------IANETTLIDP----NQVAVLFSEWCQICSHVNASDAIYSR 290
KEE I E ++DP V L +W + S N I +
Sbjct: 1994 KTLEEIKNSPKEEKKRRISRIRQEDMIVDPPGLREAVIALLQDWL-LFSSTNTDQKILIQ 2052
Query: 291 FVTQLEQDSLLNGDDISERFFHILTELAVTHSLVSEQIVAXXXXXXXXXXXXHISYFSID 470
++ Q+ Q S + + +FF + E A+ + +I + Y ID
Sbjct: 2053 YLGQVLQISFMKNELYFIKFFRLGLEYALERYAANVEIQSP-------------QYLEID 2099
Query: 471 SYAKLVVMVLKYSSVEITPNKGSILSKIISVTVRTIQKDAEEKKASFNPRPYFRLXINWL 650
S+ + VVM++K++ P K ++L+K++SV ++ + KD E + FN RPY R+ N L
Sbjct: 2100 SWCRFVVMMVKHAD----PTKLNMLTKVLSVLIKILTKDYENNPSRFNQRPYLRIFENLL 2155
Query: 651 YDLTTTD 671
DLT+ D
Sbjct: 2156 VDLTSPD 2162
>sptr|Q9Y2L0|Q9Y2L0 Hypothetical protein KIAA1007 (Fragment).
Length = 1835
Score = 74.3 bits (181), Expect = 1e-12
Identities = 64/275 (23%), Positives = 122/275 (44%), Gaps = 43/275 (15%)
Frame = +3
Query: 3 RYNVHLTKLIDGGRNKVATEFAMSLVQTLITQDP----VSISELHNVVDAISKVLA-AQV 167
+Y++HL + ++ G N +A FAM LV+ L+ + V+ ++L + ++ + ++ A ++
Sbjct: 1200 QYDLHLAQSMENGLNYMAVAFAMQLVKILLVDERSVAHVTEADLFHTIETLMRINAHSRG 1259
Query: 168 NKEESI--------ANETTLID-----PN---------------------QVAVLFSEWC 245
N E + +N +ID PN + L EW
Sbjct: 1260 NAPEGLPQLMEVVRSNYEAMIDRAHGGPNFMMHSGISQASEYDDPPGLREKAEYLLREWV 1319
Query: 246 QICSHVNA---SDAIYSRFVTQLEQDSLLNGDDISERFFHILTELAVTHSLVSEQIVAXX 416
+ A S +S FV Q+ Q +L DD+ RFF + TE+ V S Q
Sbjct: 1320 NLYHSAAAGRDSTKAFSAFVGQMHQQGILKTDDLITRFFRLCTEMCVEIS-YRAQAEQQH 1378
Query: 417 XXXXXXXXXXHISYFSIDSYAKLVVMVLKYS-SVEITPNKGSILSKIISVTVRTIQKDAE 593
Y ++D++ +L+ +++K+S T K ++L+K++ + V + +D +
Sbjct: 1379 NPAANPTMIRAKCYHNLDAFVRLIALLVKHSGEATNTVTKINLLNKVLGIVVGVLLQDHD 1438
Query: 594 EKKASFNPRPYFRLXINWLYDLTTTDGHHDGSNFQ 698
+++ F PY R+ I L +L + + NFQ
Sbjct: 1439 VRQSEFQQLPYHRIFIMLLLELNAPEHVLETINFQ 1473
>sptr|Q9UFR8|Q9UFR8 Hypothetical protein (Fragment).
Length = 1100
Score = 74.3 bits (181), Expect = 1e-12
Identities = 64/275 (23%), Positives = 122/275 (44%), Gaps = 43/275 (15%)
Frame = +3
Query: 3 RYNVHLTKLIDGGRNKVATEFAMSLVQTLITQDP----VSISELHNVVDAISKVLA-AQV 167
+Y++HL + ++ G N +A FAM LV+ L+ + V+ ++L + ++ + ++ A ++
Sbjct: 465 QYDLHLAQSMENGLNYMAVAFAMQLVKILLVDERSVAHVTEADLFHTIETLMRINAHSRG 524
Query: 168 NKEESI--------ANETTLID-----PN---------------------QVAVLFSEWC 245
N E + +N +ID PN + L EW
Sbjct: 525 NAPEGLPQLMEVVRSNYEAMIDRAHGGPNFMMHSGISQASEYDDPPGLREKAEYLLREWV 584
Query: 246 QICSHVNA---SDAIYSRFVTQLEQDSLLNGDDISERFFHILTELAVTHSLVSEQIVAXX 416
+ A S +S FV Q+ Q +L DD+ RFF + TE+ V S Q
Sbjct: 585 NLYHSAAAGRDSTKAFSAFVGQMHQQGILKTDDLITRFFRLCTEMCVEIS-YRAQAEQQH 643
Query: 417 XXXXXXXXXXHISYFSIDSYAKLVVMVLKYS-SVEITPNKGSILSKIISVTVRTIQKDAE 593
Y ++D++ +L+ +++K+S T K ++L+K++ + V + +D +
Sbjct: 644 NPAANPTMIRAKCYHNLDAFVRLIALLVKHSGEATNTVTKINLLNKVLGIVVGVLLQDHD 703
Query: 594 EKKASFNPRPYFRLXINWLYDLTTTDGHHDGSNFQ 698
+++ F PY R+ I L +L + + NFQ
Sbjct: 704 VRQSEFQQLPYHRIFIMLLLELNAPEHVLETINFQ 738
>sptr|Q8TB53|Q8TB53 Similar to KIAA1007 protein (Fragment).
Length = 1620
Score = 74.3 bits (181), Expect = 1e-12
Identities = 64/275 (23%), Positives = 122/275 (44%), Gaps = 43/275 (15%)
Frame = +3
Query: 3 RYNVHLTKLIDGGRNKVATEFAMSLVQTLITQDP----VSISELHNVVDAISKVLA-AQV 167
+Y++HL + ++ G N +A FAM LV+ L+ + V+ ++L + ++ + ++ A ++
Sbjct: 985 QYDLHLAQSMENGLNYMAVAFAMQLVKILLVDERSVAHVTEADLFHTIETLMRINAHSRG 1044
Query: 168 NKEESI--------ANETTLID-----PN---------------------QVAVLFSEWC 245
N E + +N +ID PN + L EW
Sbjct: 1045 NAPEGLPQLMEVVRSNYEAMIDRAHGGPNFMMHSGISQASEYDDPPGLREKAEYLLREWV 1104
Query: 246 QICSHVNA---SDAIYSRFVTQLEQDSLLNGDDISERFFHILTELAVTHSLVSEQIVAXX 416
+ A S +S FV Q+ Q +L DD+ RFF + TE+ V S Q
Sbjct: 1105 NLYHSAAAGRDSTKAFSAFVGQMHQQGILKTDDLITRFFRLCTEMCVEIS-YRAQAEQQH 1163
Query: 417 XXXXXXXXXXHISYFSIDSYAKLVVMVLKYS-SVEITPNKGSILSKIISVTVRTIQKDAE 593
Y ++D++ +L+ +++K+S T K ++L+K++ + V + +D +
Sbjct: 1164 NPAANPTMIRAKCYHNLDAFVRLIALLVKHSGEATNTVTKINLLNKVLGIVVGVLLQDHD 1223
Query: 594 EKKASFNPRPYFRLXINWLYDLTTTDGHHDGSNFQ 698
+++ F PY R+ I L +L + + NFQ
Sbjct: 1224 VRQSEFQQLPYHRIFIMLLLELNAPEHVLETINFQ 1258
>sptr|Q8K3D8|Q8K3D8 Hypothetical protein.
Length = 1117
Score = 73.9 bits (180), Expect = 2e-12
Identities = 63/275 (22%), Positives = 122/275 (44%), Gaps = 43/275 (15%)
Frame = +3
Query: 3 RYNVHLTKLIDGGRNKVATEFAMSLVQTLITQDP----VSISELHNVVDAISKVLA-AQV 167
+Y++HL + ++ G N +A FAM LV+ L+ + ++ ++L + ++ + ++ A ++
Sbjct: 482 QYDLHLAQSMENGLNYMAVAFAMQLVKILLVDERSVAHITEADLFHTIETLMRINAHSRG 541
Query: 168 NKEESI--------ANETTLID-----PN---------------------QVAVLFSEWC 245
N E + +N +ID PN + L EW
Sbjct: 542 NAPEGLPQLMEVVRSNYEAMIDRAHGGPNFMMHSGISQASEYDDPPGLREKAEYLLREWV 601
Query: 246 QICSHVNA---SDAIYSRFVTQLEQDSLLNGDDISERFFHILTELAVTHSLVSEQIVAXX 416
+ A S +S FV Q+ Q +L DD+ RFF + TE+ V S Q
Sbjct: 602 NLYHSAAAGRDSTKAFSAFVGQMHQQGILKTDDLITRFFRLCTEMCVEIS-YRAQAEQQH 660
Query: 417 XXXXXXXXXXHISYFSIDSYAKLVVMVLKYS-SVEITPNKGSILSKIISVTVRTIQKDAE 593
Y ++D++ +L+ +++K+S T K ++L+K++ + V + +D +
Sbjct: 661 NPAANPTMIRAKCYHNLDAFVRLIALLVKHSGEATNTVTKINLLNKVLGIVVGVLLQDHD 720
Query: 594 EKKASFNPRPYFRLXINWLYDLTTTDGHHDGSNFQ 698
+++ F PY R+ I L +L + + NFQ
Sbjct: 721 VRQSEFQQLPYHRIFIMLLLELNAPEHVLETINFQ 755
>sptrnew|BAC98068|BAC98068 MKIAA1007 protein (Fragment).
Length = 1458
Score = 73.9 bits (180), Expect = 2e-12
Identities = 63/275 (22%), Positives = 122/275 (44%), Gaps = 43/275 (15%)
Frame = +3
Query: 3 RYNVHLTKLIDGGRNKVATEFAMSLVQTLITQDP----VSISELHNVVDAISKVLA-AQV 167
+Y++HL + ++ G N +A FAM LV+ L+ + ++ ++L + ++ + ++ A ++
Sbjct: 823 QYDLHLAQSMENGLNYMAVAFAMQLVKILLVDERSVAHITEADLFHTIETLMRINAHSRG 882
Query: 168 NKEESI--------ANETTLID-----PN---------------------QVAVLFSEWC 245
N E + +N +ID PN + L EW
Sbjct: 883 NAPEGLPQLMEVVRSNYEAMIDRAHGGPNFMMHSGISQASEYDDPPGLREKAEYLLREWV 942
Query: 246 QICSHVNA---SDAIYSRFVTQLEQDSLLNGDDISERFFHILTELAVTHSLVSEQIVAXX 416
+ A S +S FV Q+ Q +L DD+ RFF + TE+ V S Q
Sbjct: 943 NLYHSAAAGRDSTKAFSAFVGQMHQQGILKTDDLITRFFRLCTEMCVEIS-YRAQAEQQH 1001
Query: 417 XXXXXXXXXXHISYFSIDSYAKLVVMVLKYS-SVEITPNKGSILSKIISVTVRTIQKDAE 593
Y ++D++ +L+ +++K+S T K ++L+K++ + V + +D +
Sbjct: 1002 NPAANPTMIRAKCYHNLDAFVRLIALLVKHSGEATNTVTKINLLNKVLGIVVGVLLQDHD 1061
Query: 594 EKKASFNPRPYFRLXINWLYDLTTTDGHHDGSNFQ 698
+++ F PY R+ I L +L + + NFQ
Sbjct: 1062 VRQSEFQQLPYHRIFIMLLLELNAPEHVLETINFQ 1096
>sptr|Q7Z3K2|Q7Z3K2 Hypothetical protein DKFZp686K24111.
Length = 2150
Score = 73.2 bits (178), Expect = 3e-12
Identities = 64/275 (23%), Positives = 121/275 (44%), Gaps = 43/275 (15%)
Frame = +3
Query: 3 RYNVHLTKLIDGGRNKVATEFAMSLVQTLITQDP----VSISELHNVVDAISKVLA-AQV 167
+Y++HL + ++ G N +A FAM LV+ L+ + V+ ++L + ++ + ++ A +
Sbjct: 1736 QYDLHLAQSMENGLNYMAVAFAMQLVKILLVDERSVAHVTEADLFHTIETLMRINAHSGG 1795
Query: 168 NKEESI--------ANETTLID-----PN---------------------QVAVLFSEWC 245
N E + +N +ID PN + L EW
Sbjct: 1796 NAPEGLPQLMEVVRSNYEAMIDRAHGGPNFMMHSGISQASEYDDPPGLREKAEYLLREWV 1855
Query: 246 QICSHVNA---SDAIYSRFVTQLEQDSLLNGDDISERFFHILTELAVTHSLVSEQIVAXX 416
+ A S +S FV Q+ Q +L DD+ RFF + TE+ V S Q
Sbjct: 1856 NLYHSAAAGRDSTKAFSAFVGQMHQQGILKTDDLITRFFRLCTEMCVEIS-YRAQAEQQH 1914
Query: 417 XXXXXXXXXXHISYFSIDSYAKLVVMVLKYS-SVEITPNKGSILSKIISVTVRTIQKDAE 593
Y ++D++ +L+ +++K+S T K ++L+K++ + V + +D +
Sbjct: 1915 NPAANPTMIRAKCYHNLDAFVRLIALLVKHSGEATNTVTKINLLNKVLGIVVGVLLQDHD 1974
Query: 594 EKKASFNPRPYFRLXINWLYDLTTTDGHHDGSNFQ 698
+++ F PY R+ I L +L + + NFQ
Sbjct: 1975 VRQSEFQQLPYHRIFIMLLLELNAPEHVLETINFQ 2009
>sptrnew|CAA42248|CAA42248 Nuclear protein.
Length = 2108
Score = 65.1 bits (157), Expect = 9e-10
Identities = 58/236 (24%), Positives = 107/236 (45%), Gaps = 18/236 (7%)
Frame = +3
Query: 27 LIDGGRNKV--ATEFAMSLVQ-TLITQDPVSISELHNVVDAISKVLAAQVNKEESIAN-- 191
L+ +NK+ +TEFAM L+Q T+++ DP+ + +D I + +++E++
Sbjct: 1495 LVTAMKNKMENSTEFAMKLIQNTVLSDDPILMR-----MDFIKTLEHLASSEDENVKKFI 1549
Query: 192 ---ETTLIDP----------NQVAVLFSEWCQICSHVNASDAIYSRFVTQLEQDSLLNGD 332
E T I P ++ ++F+EW ++ V +D I + F+ QL + +++
Sbjct: 1550 KEFEDTKIMPVRKGTKTTRTEKLYLVFTEWVKLLQRVENNDVITTVFIKQLVEKGVISDT 1609
Query: 333 DISERFFHILTELAVTHSLVSEQIVAXXXXXXXXXXXXHISYFSIDSYAKLVVMVLKYSS 512
D F EL+V+ S+ + +ID+ L++ +L
Sbjct: 1610 DNLLTFVKSSLELSVSSFKESDPTDEV--------------FIAIDALGSLIIKLLILQG 1655
Query: 513 VEITPNKGSILSKIISVTVRTIQKDAEEKKASFNPRPYFRLXINWLYDLTTTDGHH 680
+ + ++ I SV V KD ++ +FN RPYFRL N LY+ T H+
Sbjct: 1656 FK-DDTRRDYINAIFSVIVLVFAKDHSQEGTTFNERPYFRLFSNILYEWATIRTHN 1710
>sw|P25655|NOT1_YEAST General negative regulator of transcription
subunit 1.
Length = 2108
Score = 65.1 bits (157), Expect = 9e-10
Identities = 58/236 (24%), Positives = 107/236 (45%), Gaps = 18/236 (7%)
Frame = +3
Query: 27 LIDGGRNKV--ATEFAMSLVQ-TLITQDPVSISELHNVVDAISKVLAAQVNKEESIAN-- 191
L+ +NK+ +TEFAM L+Q T+++ DP+ + +D I + +++E++
Sbjct: 1495 LVTAMKNKMENSTEFAMKLIQNTVLSDDPILMR-----MDFIKTLEHLASSEDENVKKFI 1549
Query: 192 ---ETTLIDP----------NQVAVLFSEWCQICSHVNASDAIYSRFVTQLEQDSLLNGD 332
E T I P ++ ++F+EW ++ V +D I + F+ QL + +++
Sbjct: 1550 KEFEDTKIMPVRKGTKTTRTEKLYLVFTEWVKLLQRVENNDVITTVFIKQLVEKGVISDT 1609
Query: 333 DISERFFHILTELAVTHSLVSEQIVAXXXXXXXXXXXXHISYFSIDSYAKLVVMVLKYSS 512
D F EL+V+ S+ + +ID+ L++ +L
Sbjct: 1610 DNLLTFVKSSLELSVSSFKESDPTDEV--------------FIAIDALGSLIIKLLILQG 1655
Query: 513 VEITPNKGSILSKIISVTVRTIQKDAEEKKASFNPRPYFRLXINWLYDLTTTDGHH 680
+ + ++ I SV V KD ++ +FN RPYFRL N LY+ T H+
Sbjct: 1656 FK-DDTRRDYINAIFSVIVLVFAKDHSQEGTTFNERPYFRLFSNILYEWATIRTHN 1710
>sptrnew|AAH00779|AAH00779 KIAA1007 protein (Fragment).
Length = 539
Score = 62.8 bits (151), Expect = 4e-09
Identities = 42/161 (26%), Positives = 75/161 (46%), Gaps = 4/161 (2%)
Frame = +3
Query: 228 LFSEWCQICSHVNA---SDAIYSRFVTQLEQDSLLNGDDISERFFHILTELAVTHSLVSE 398
L EW + A S +S FV Q+ Q +L DD+ RFF + TE+ V S
Sbjct: 18 LLREWVNLYHSAAAGRDSTKAFSAFVGQMHQQGILKTDDLITRFFRLCTEMCVEIS-YRA 76
Query: 399 QIVAXXXXXXXXXXXXHISYFSIDSYAKLVVMVLKYS-SVEITPNKGSILSKIISVTVRT 575
Q Y ++D++ +L+ +++K+S T K ++L+K++ + V
Sbjct: 77 QAEQQHNPAANPTMIRAKCYHNLDAFVRLIALLVKHSGEATNTVTKINLLNKVLGIVVGV 136
Query: 576 IQKDAEEKKASFNPRPYFRLXINWLYDLTTTDGHHDGSNFQ 698
+ +D + +++ F PY R+ I L +L + + NFQ
Sbjct: 137 LLQDHDVRQSEFQQLPYHRIFIMLLLELNAPEHVLETINFQ 177
>sptr|Q20937|Q20937 Hypothetical protein.
Length = 2500
Score = 61.6 bits (148), Expect = 1e-08
Identities = 37/158 (23%), Positives = 77/158 (48%), Gaps = 6/158 (3%)
Frame = +3
Query: 216 QVAVLFSEWCQIC---SHVNASDAIYSRFVTQLEQDSLLNGDDISERFFHILTELAVTHS 386
+V ++ EW +C + + ++ + + + +L DD +FF + E V S
Sbjct: 1948 KVEIIMREWIGLCYSPTGQRSPQESLAQMIQLMHEHGVLATDDKITQFFRLCVENCVDIS 2007
Query: 387 ---LVSEQIVAXXXXXXXXXXXXHISYFSIDSYAKLVVMVLKYSSVEITPNKGSILSKII 557
+ SEQ+ H Y+++D++ KL+ +++++S + NK ++L K++
Sbjct: 2008 VRVMKSEQLA----NGLPTTLIRHRCYYTLDAFVKLMALMIRHSDNGQSQNKINLLKKLL 2063
Query: 558 SVTVRTIQKDAEEKKASFNPRPYFRLXINWLYDLTTTD 671
++ V + D E +K FN PY R+ I+ ++T D
Sbjct: 2064 NIIVGVLHMDHEVRKQDFNAMPYHRILISLFNEITGPD 2101
>sptr|P87112|P87112 Putative CCR4-Not complex.
Length = 2100
Score = 54.3 bits (129), Expect = 2e-06
Identities = 54/226 (23%), Positives = 103/226 (45%), Gaps = 25/226 (11%)
Frame = +3
Query: 57 TEFAMSLVQTLIT-QDPV--------SISELHNVVDAIS-------KVLAAQVNKEESIA 188
T+FA+ L++T + ++P+ SI+ L+ + ++ S + L +NK S A
Sbjct: 1511 TDFAIELLRTAVGGENPMALPGNFVNSITSLYEISESFSGETKQAYEQLVETMNKSVSPA 1570
Query: 189 NETTLIDPN------QVAVLFSEWCQICSHVNASDAIYSRFVTQLEQDSLLNGDDISERF 350
+E N Q+ ++F W + + +D + FV QL + +L+ ++ +F
Sbjct: 1571 SEILSDLDNKQQLNDQIIIVFVSWVHLLRNSATNDETKAAFVYQLHKQGILSEPELCIQF 1630
Query: 351 FHILTELAVTHSLVSEQIVAXXXXXXXXXXXXHISYFSIDSYAKLVVMVLKYS--SVEIT 524
F E + L + + A YF++D+YA L+V V+KY+ S E T
Sbjct: 1631 FRCNLEAVLVAFLEAASVNAP-------------DYFNVDAYASLLVNVVKYTEGSTEGT 1677
Query: 525 PNKGSILSKIISVTVRTIQKDAEEKKASF-NPRPYFRLXINWLYDL 659
+ S+L + I + + + A F + + +FRL + L +L
Sbjct: 1678 VSSKSVLFRKIIALIIGVFAELHNSMAEFVHQKTFFRLFSSILSEL 1723
>sptr|Q8BXB2|Q8BXB2 Adrenal gland protein AD-005 homolog.
Length = 424
Score = 53.5 bits (127), Expect = 3e-06
Identities = 33/133 (24%), Positives = 65/133 (48%), Gaps = 1/133 (0%)
Frame = +3
Query: 303 LEQDSLLNGDDISERFFHILTELAVTHSLVSEQIVAXXXXXXXXXXXXHISYFSIDSYAK 482
+ Q +L DD+ RFF + TE+ V S + Q Y ++D++ +
Sbjct: 1 MHQQGILKTDDLITRFFRLCTEMCVEISYRA-QAEQQHNPAANPTMIRAKCYHNLDAFVR 59
Query: 483 LVVMVLKYSSVEI-TPNKGSILSKIISVTVRTIQKDAEEKKASFNPRPYFRLXINWLYDL 659
L+ +++K+S T K ++L+K++ + V + +D + +++ F PY R+ I L +L
Sbjct: 60 LIALLVKHSGEATNTVTKINLLNKVLGIVVGVLLQDHDVRQSEFQQLPYHRIFIMLLLEL 119
Query: 660 TTTDGHHDGSNFQ 698
+ + NFQ
Sbjct: 120 NAPEHVLETINFQ 132
>sptr|Q7PW82|Q7PW82 ENSANGP00000016536 (Fragment).
Length = 1872
Score = 52.4 bits (124), Expect = 6e-06
Identities = 59/271 (21%), Positives = 110/271 (40%), Gaps = 48/271 (17%)
Frame = +3
Query: 3 RYNVHLTKLIDGGRNKVATEFAMSLVQTLITQD----PVSISELHNVVDAISKVLAAQVN 170
++++ L +L+D G N VA FAM L+QT + ++ ++L ++ + + L A
Sbjct: 1238 QFDMMLVQLMDNGNNYVAVVFAMQLLQTFFIDERHNSAITENDLAGTIEMLHR-LTAHPR 1296
Query: 171 KEESIANETTLI----DPNQVAV----------------------------------LFS 236
E + + ++ DPN + L
Sbjct: 1297 APEGLTHLIEMLRANHDPNSFLMDRAIVGPTSYIHAGVAQARSDIDDSPGFLERAEFLLK 1356
Query: 237 EWCQICSHVNAS-DAI--YSRFVTQLEQDSLLNGDDISERFFHILTELAV--THSLVSEQ 401
+W I N D + +S FV ++ +L GD+ RFF T+ + T+ ++E
Sbjct: 1357 DWVTIALSPNTCRDPLKGFSVFVGKMNAHGILKGDEPLTRFFRFATQYCIDLTYRNMNEP 1416
Query: 402 IVAXXXXXXXXXXXXHISYFSIDSYAKLVVMVLKYSSVEITPN-KGSILSKIISVTVRTI 578
I F ID+Y +L+ +++K+S + N K ++L+KI+ + + +
Sbjct: 1417 -----------NAKTKIFQF-IDAYVRLIALLVKHSGESGSTNTKLNLLNKILGIIIGIL 1464
Query: 579 QKDAEEKKASFNPRPYFRLXINWLYDLTTTD 671
D E +F Y R+ +LTT D
Sbjct: 1465 LHDQEVHTTAFQQVGYHRIFAMLFLELTTHD 1495
>sptr|Q8ILS4|Q8ILS4 Hypothetical protein.
Length = 4466
Score = 48.9 bits (115), Expect = 7e-05
Identities = 28/71 (39%), Positives = 43/71 (60%), Gaps = 1/71 (1%)
Frame = +3
Query: 450 ISYFSIDSYAKLVVMVLKYSSVE-ITPNKGSILSKIISVTVRTIQKDAEEKKASFNPRPY 626
++Y IDS+ K+++ +LK +E I+P IL K++++ R I K E +K FN RPY
Sbjct: 3923 LNYNYIDSWTKMIITMLKLVDIEKISPI--FILQKVLNLICRVIHKKYESEKKHFNQRPY 3980
Query: 627 FRLXINWLYDL 659
FRL L D+
Sbjct: 3981 FRLLHCLLIDI 3991
>sptr|Q7YYI7|Q7YYI7 Putative transcription regulatory protein,
possible.
Length = 2589
Score = 48.1 bits (113), Expect = 1e-04
Identities = 34/129 (26%), Positives = 58/129 (44%), Gaps = 7/129 (5%)
Frame = +3
Query: 291 FVTQLEQDSLLNGDDISERFFHILTE----LAVTHSLVSEQIVAXXXXXXXXXXXXHISY 458
F+ +L + LL DD +E+ F E L++ H+ + ++
Sbjct: 2059 FLQRLSRQGLLRMDDTTEKLFTACIERAIYLSLNHNSSDSDALNNSISENANDSRNNMDP 2118
Query: 459 FSIDSYAKLVVMVLKYSSVEITPNKGS---ILSKIISVTVRTIQKDAEEKKASFNPRPYF 629
F IDS +L+ + +Y + P + + I K +S+ R I KDAE FN RPY+
Sbjct: 2119 FPIDSLVRLITTMARY----VDPQQMAAVVITHKFLSILTRVIHKDAESH--GFNQRPYY 2172
Query: 630 RLXINWLYD 656
R+ + L +
Sbjct: 2173 RIFYSLLQE 2181
>sptr|Q7RPM6|Q7RPM6 Hypothetical protein (Fragment).
Length = 1264
Score = 47.8 bits (112), Expect = 1e-04
Identities = 26/78 (33%), Positives = 47/78 (60%), Gaps = 1/78 (1%)
Frame = +3
Query: 462 SIDSYAKLVVMVLKY-SSVEITPNKGSILSKIISVTVRTIQKDAEEKKASFNPRPYFRLX 638
SID+ AK++V ++K S +ITP +L K++++ R + + +KK FN RPYFRL
Sbjct: 980 SIDALAKMIVSMMKLVDSQKITPYL--LLQKVMNIFCRILXYECRKKKNKFNQRPYFRLF 1037
Query: 639 INWLYDLTTTDGHHDGSN 692
++ L ++ + + + N
Sbjct: 1038 LSILIEINKNEKNIESYN 1055
>sptr|Q8IH39|Q8IH39 GH26494p (Fragment).
Length = 669
Score = 44.3 bits (103), Expect = 0.002
Identities = 57/274 (20%), Positives = 102/274 (37%), Gaps = 56/274 (20%)
Frame = +3
Query: 18 LTKLIDGGRNKVATEFAMSLVQTLITQDPV----SISELHNVVDAISKVLAAQVNKEESI 185
L +D G N VA F ++L++ LI D V S +E V+ + ++ + E I
Sbjct: 23 LRDCMDNGNNYVAISFGIALLERLIMDDRVINIVSDNEFMATVELLGRLTQHRHRYPECI 82
Query: 186 ANETTLI---------------------------------------DP----NQVAVLFS 236
N + DP + L
Sbjct: 83 VNAIDTLWSGNFNSSSDYSPFNGNDRYLSGASHYIHSGMHHSCDTDDPPGLQEKTEFLLK 142
Query: 237 EWCQICSHVNASDAIYSR----FVTQLEQDSLLNGDDISERFF----HILTELAVTHSLV 392
+W + + N +R FV ++ +L DD+ RFF HI T+ V + +
Sbjct: 143 DWVALYTQQNQQSTRDARNFGAFVQKMNTYGILKTDDLITRFFRQATHICTD--VVYRMF 200
Query: 393 SEQIVAXXXXXXXXXXXXHISYFSIDSYAKLVVMVLKYSSVEITP-NKGSILSKIISVTV 569
+E + + ID++ L+ M++++S P K ++L+K++ + +
Sbjct: 201 AEPSLPINQAKNKI-------FQWIDAFVHLIAMLVRHSGEAGNPTTKINLLNKVLGIVL 253
Query: 570 RTIQKDAEEKKASFNPRPYFRLXINWLYDLTTTD 671
T+ KD E + SF Y R + +L T D
Sbjct: 254 GTLIKDHEMRGVSFQQVGYHRFFMMLFMELCTAD 287
>sptr|Q9V591|Q9V591 CG1884 protein.
Length = 1766
Score = 44.3 bits (103), Expect = 0.002
Identities = 57/274 (20%), Positives = 102/274 (37%), Gaps = 56/274 (20%)
Frame = +3
Query: 18 LTKLIDGGRNKVATEFAMSLVQTLITQDPV----SISELHNVVDAISKVLAAQVNKEESI 185
L +D G N VA F ++L++ LI D V S +E V+ + ++ + E I
Sbjct: 1120 LRDCMDNGNNYVAISFGIALLERLIMDDRVINIVSDNEFMATVELLGRLTQHRHRYPECI 1179
Query: 186 ANETTLI---------------------------------------DP----NQVAVLFS 236
N + DP + L
Sbjct: 1180 VNAIDTLWSGNFNSSSDYSPFNGNDRYLSGASHYIHSGMHHSCDTDDPPGLQEKTEFLLK 1239
Query: 237 EWCQICSHVNASDAIYSR----FVTQLEQDSLLNGDDISERFF----HILTELAVTHSLV 392
+W + + N +R FV ++ +L DD+ RFF HI T+ V + +
Sbjct: 1240 DWVALYTQQNQQSTRDARNFGAFVQKMNTYGILKTDDLITRFFRQATHICTD--VVYRMF 1297
Query: 393 SEQIVAXXXXXXXXXXXXHISYFSIDSYAKLVVMVLKYSSVEITP-NKGSILSKIISVTV 569
+E + + ID++ L+ M++++S P K ++L+K++ + +
Sbjct: 1298 AEPSLPINQAKNKI-------FQWIDAFVHLIAMLVRHSGEAGNPTTKINLLNKVLGIVL 1350
Query: 570 RTIQKDAEEKKASFNPRPYFRLXINWLYDLTTTD 671
T+ KD E + SF Y R + +L T D
Sbjct: 1351 GTLIKDHEMRGVSFQQVGYHRFFMMLFMELCTAD 1384
>sptr|Q8MKU3|Q8MKU3 CG1884-PA.
Length = 1768
Score = 43.5 bits (101), Expect = 0.003
Identities = 37/157 (23%), Positives = 69/157 (43%), Gaps = 9/157 (5%)
Frame = +3
Query: 228 LFSEWCQICSHVNASDAIYSR----FVTQLEQDSLLNGDDISERFF----HILTELAVTH 383
L +W + + N +R FV ++ +L DD+ RFF HI T+ V +
Sbjct: 1239 LLKDWVALYTQQNQQSTRDARNFGAFVQKMNTYGILKTDDLITRFFRQATHICTD--VVY 1296
Query: 384 SLVSEQIVAXXXXXXXXXXXXHISYFSIDSYAKLVVMVLKYSSVEITP-NKGSILSKIIS 560
+ +E + + ID++ L+ M++++S P K ++L+K++
Sbjct: 1297 RMFAEPSLPINQAKNKI-------FQWIDAFVHLIAMLVRHSGEAGNPTTKINLLNKVLG 1349
Query: 561 VTVRTIQKDAEEKKASFNPRPYFRLXINWLYDLTTTD 671
+ + T+ KD E + SF Y R + +L T D
Sbjct: 1350 IVLGTLIKDHEMRGVSFQQVGYHRFFMMLFMELCTAD 1386
>sptr|Q95TG6|Q95TG6 SD07194p.
Length = 581
Score = 43.5 bits (101), Expect = 0.003
Identities = 37/157 (23%), Positives = 69/157 (43%), Gaps = 9/157 (5%)
Frame = +3
Query: 228 LFSEWCQICSHVNASDAIYSR----FVTQLEQDSLLNGDDISERFF----HILTELAVTH 383
L +W + + N +R FV ++ +L DD+ RFF HI T+ V +
Sbjct: 183 LLKDWVALYTQQNQQSTRDARNFGAFVQKMNTYGILKTDDLITRFFRQATHICTD--VVY 240
Query: 384 SLVSEQIVAXXXXXXXXXXXXHISYFSIDSYAKLVVMVLKYSSVEITP-NKGSILSKIIS 560
+ +E + + ID++ L+ M++++S P K ++L+K++
Sbjct: 241 RMFAEPSLPINQAKNKI-------FQWIDAFVHLIAMLVRHSGEAGNPTTKINLLNKVLG 293
Query: 561 VTVRTIQKDAEEKKASFNPRPYFRLXINWLYDLTTTD 671
+ + T+ KD E + SF Y R + +L T D
Sbjct: 294 IVLGTLIKDHEMRGVSFQQVGYHRFFMMLFMELCTAD 330
>sptr|Q7RK48|Q7RK48 Similar to KIAA1007 protein-related (Fragment).
Length = 947
Score = 40.8 bits (94), Expect = 0.018
Identities = 23/70 (32%), Positives = 39/70 (55%)
Frame = +3
Query: 450 ISYFSIDSYAKLVVMVLKYSSVEITPNKGSILSKIISVTVRTIQKDAEEKKASFNPRPYF 629
++Y IDS++K++V++L+ + +L K+++ I K E +K FN RPYF
Sbjct: 415 LNYNYIDSWSKMIVIILQLVEDIKGISPIIVLQKVLNSLCMIIHKRCEIEKRKFNQRPYF 474
Query: 630 RLXINWLYDL 659
RL L D+
Sbjct: 475 RLLHCLLNDI 484
>sptr|Q8IIW4|Q8IIW4 Hypothetical protein, conserved.
Length = 3371
Score = 40.8 bits (94), Expect = 0.018
Identities = 19/67 (28%), Positives = 44/67 (65%), Gaps = 1/67 (1%)
Frame = +3
Query: 462 SIDSYAKLVVMVLKYSSVE-ITPNKGSILSKIISVTVRTIQKDAEEKKASFNPRPYFRLX 638
+ID+ AK+++ ++K ++ I+P + K++++ R I ++ + K++FN RPY+RL
Sbjct: 2641 TIDALAKMIICMMKLIDIQQISPFV--LFQKVMNIFCRIIVYESRKNKSNFNQRPYYRLF 2698
Query: 639 INWLYDL 659
++ L ++
Sbjct: 2699 LSILIEI 2705
>sptr|O18363|O18363 Knockout.
Length = 882
Score = 33.9 bits (76), Expect = 2.2
Identities = 17/54 (31%), Positives = 26/54 (48%)
Frame = +3
Query: 522 TPNKGSILSKIISVTVRTIQKDAEEKKASFNPRPYFRLXINWLYDLTTTDGHHD 683
+P KGS+LS++ + R Q+ E A F P +F L+ + T HD
Sbjct: 353 SPKKGSLLSRLFRRSGRAKQRQIETYSAQFPPAEWFNTRAVHLHSVGTQTAEHD 406
>sptr|Q7N5J2|Q7N5J2 FliZ protein.
Length = 170
Score = 33.9 bits (76), Expect = 2.2
Identities = 26/95 (27%), Positives = 43/95 (45%)
Frame = +3
Query: 123 HNVVDAISKVLAAQVNKEESIANETTLIDPNQVAVLFSEWCQICSHVNASDAIYSRFVTQ 302
H +D IS V QV +ESI+ T LID L ++ +C RF ++
Sbjct: 29 HKALDRISLVFNGQVINKESISEMTELIDDKTWDELQDKFVALC-----------RFCSE 77
Query: 303 LEQDSLLNGDDISERFFHILTELAVTHSLVSEQIV 407
+ +S + DI ++ + ++HS V E +V
Sbjct: 78 IYCNSETDYFDIMSFKQYLFEQTEMSHSTVREYVV 112
>sptr|Q9VP79|Q9VP79 KO gene product.
Length = 1049
Score = 33.9 bits (76), Expect = 2.2
Identities = 17/54 (31%), Positives = 26/54 (48%)
Frame = +3
Query: 522 TPNKGSILSKIISVTVRTIQKDAEEKKASFNPRPYFRLXINWLYDLTTTDGHHD 683
+P KGS+LS++ + R Q+ E A F P +F L+ + T HD
Sbjct: 353 SPKKGSLLSRLFRRSGRAKQRQIETYSAQFPPAEWFNTRAVHLHSVGTQTAEHD 406
>sptr|Q7RE57|Q7RE57 Hypothetical protein.
Length = 148
Score = 33.5 bits (75), Expect = 2.9
Identities = 20/78 (25%), Positives = 38/78 (48%)
Frame = +3
Query: 78 VQTLITQDPVSISELHNVVDAISKVLAAQVNKEESIANETTLIDPNQVAVLFSEWCQICS 257
++T I DP + +N+ D ++ ++ ++SI N L + + +LF E +CS
Sbjct: 22 IETFILNDPFLGEKFNNLYDMVN------IDFDKSIKNNIKLYEKQNMRILFKE---LCS 72
Query: 258 HVNASDAIYSRFVTQLEQ 311
N +D I + Q +Q
Sbjct: 73 MENKNDDIKDELIYQKKQ 90
Database: swall
Posted date: Feb 26, 2004 3:00 PM
Number of letters in database: 439,479,560
Number of sequences in database: 1,381,838
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 514,146,878
Number of Sequences: 1381838
Number of extensions: 9879579
Number of successful extensions: 22319
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 21790
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22304
length of database: 439,479,560
effective HSP length: 119
effective length of database: 275,040,838
effective search space used: 31354655532
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)