TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= QCS9f07.yg.2.1
(394 letters)
Database: Triticum_nucl_with_EST.fasta
636,343 sequences; 367,240,239 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BQ167130.1|BQ167130 WHE0946_F09_K18ZY Wheat 5-15 DAP spi... 286 1e-076
emb|AJ582182.1|TAE582182 Triticum aestivum mRNA for putativ... 286 1e-076
gb|CD907374.1|CD907374 G468.106L19R010929 G468 Triticum aes... 257 1e-071
gb|CD907433.1|CD907433 G468.106O06F010813 G468 Triticum aes... 218 3e-056
gb|CA602908.1|CA602908 wr1.pk0007.e11 wr1 Triticum aestivum... 206 8e-053
gb|CA661821.1|CA661821 wlmk1.pk0008.b8 wlmk1 Triticum aesti... 118 5e-031
gb|CA502151.1|CA502151 WHE4043_D07_H13ZT Wheat meiotic anth... 132 2e-030
gb|CA635966.1|CA635966 wle1n.pk0100.d4 wle1n Triticum aesti... 33 2.1
gb|CK209108.1|CK209108 FGAS020851 Triticum aestivum FGAS: L... 25 3.4
gb|CA660009.1|CA660009 wlm1.pk0014.c11 wlm1 Triticum aestiv... 25 3.4
gb|BJ313668.1|BJ313668 BJ313668 Y. Ogihara unpublished cDNA... 32 3.9
gb|CD901776.1|CD901776 G356.104O07F010918 G356 Triticum aes... 32 3.9
gb|CD901777.1|CD901777 G356.104O07R011024 G356 Triticum aes... 32 3.9
gb|AL812294.1|AL812294 AL812294 e:310 Triticum aestivum cDN... 32 3.9
gb|CK217654.1|CK217654 FGAS029656 Triticum aestivum FGAS: L... 26 4.5
gb|BE425773.1|BE425773 WHE0316_C04_C04ZS Wheat unstressed s... 31 7.3
gb|BF293594.1|BF293594 WHE2158_F09_L18ZS Triticum turgidum ... 31 7.3
gb|BU100954.1|BU100954 WHE3359_H02_O03ZS Chinese Spring alu... 31 7.3
>gb|BQ167130.1|BQ167130 WHE0946_F09_K18ZY Wheat 5-15 DAP spike cDNA library Triticum
aestivum cDNA clone WHE0946_F09_K18, mRNA sequence
Length = 701
Score = 286 bits (618), Expect = 1e-076
Identities = 115/131 (87%), Positives = 124/131 (94%)
Frame = -1 / -3
Query: 394 KYDGPSDSFKALIDMAAVHSSCRLCIHIATKIHLKEERTPKFTNRPCSCSSKKGTVYHLF 215
KYDGPSDSFKALIDMAAVHSSCRLCIHIATKIH KEERTPKF NR CSCSSK+GTVYHLF
Sbjct: 657 KYDGPSDSFKALIDMAAVHSSCRLCIHIATKIHEKEERTPKFMNRSCSCSSKRGTVYHLF 478
Query: 214 IRERGRFKSESIYMRSGQLTLGALESAVLGKFRSLNHVPVWKDERPPSIRGGDDLKLYRI 35
+RERGRFK+ESIY+RS QLTLGALESAV GKFRSL HVPVWKDERP SIRGGD+LK+Y+I
Sbjct: 477 VRERGRFKTESIYLRSDQLTLGALESAVHGKFRSLKHVPVWKDERPSSIRGGDELKVYKI 298
Query: 34 YPVGLTQRQAL 2
YP+GLT+RQAL
Sbjct: 297 YPIGLTERQAL 265
Score = 198 bits (426), Expect = 3e-050
Identities = 92/125 (73%), Positives = 95/125 (76%)
Frame = +3 / +2
Query: 18 VRPTG*ILYSFRXXXXXXXXXXXXFHTGTWLRDLNLPSTADSKAPSVNWPDLI*MLSDLN 197
VRP G*ILY+F FHTGT LRDLNLP TADSKAP VN DL *MLS LN
Sbjct: 281 VRPIG*ILYTFNSSPPRILDGLSSFHTGTCLRDLNLPCTADSKAPKVN*SDLR*MLSVLN 460
Query: 198 RPLSRINKW*TVPFLLEQLQGRFVNFGVLSSFK*ILVAICIQRRQDE*TAAMSIRALKES 377
RPLS NKW TVP LLEQL RF+NFGVLSSF *I VAIC+QRRQDE*TAAMSI ALKES
Sbjct: 461 RPLSLTNKWYTVPLLLEQLHERFINFGVLSSFS*IFVAICMQRRQDE*TAAMSISALKES 640
Query: 378 DGPSY 392
DGPSY
Sbjct: 641 DGPSY 655
Score = 180 bits (388), Expect = 6e-045
Identities = 82/129 (63%), Positives = 91/129 (70%)
Frame = +2 / +1
Query: 8 LTLC*TDWVNSV*FQVIPTSNTRWPFILPYRNVVEGPKFTEHCRFQGSQC*LARSHINAL 187
L+ C T WVN V Q+IP SNT WPFILPYRN++EG KFT H R Q S *L S INAL
Sbjct: 271 LSFCKTYWVNFVHLQLIPASNT*WPFILPYRNMLEGSKFTMHGRLQSS*S*LI*S*INAL 450
Query: 188 *LKPPSLSDKQVVNCPLFAGTATRSICKFWSPFLL*MNLGSNMYTKTTR*MNRCHVDKSF 367
LKPPSLSDK VV C FAG T +I KFW F +NL S+MY K T *MNRCHV+K
Sbjct: 451 CLKPPSLSDK*VVYCSSFAGATT*AIHKFWRSFFFFVNLRSDMYAKATG*MNRCHVNKCL 630
Query: 368 ERIRWTIIL 394
ERIRWTI+L
Sbjct: 631 ERIRWTIVL 657
Score = 170 bits (365), Expect = 9e-042
Identities = 79/122 (64%), Positives = 89/122 (72%)
Frame = -2 / -1
Query: 393 SMMVHLILSKLLSTWQRFIHLVVFVYILLPRFI*RRKGLQNLQIDLVAVPAKRGQFTTCL 214
S MVHLILS+ L TWQRFIH V F YI L RF ++K QNL I V PAK Q+TT L
Sbjct: 656 STMVHLILSRHLLTWQRFIHPVAFAYISLRRFTKKKKERQNL*IAHVVAPAKEEQYTTYL 477
Query: 213 SEREGGLSQRAFI*DRAS*HWEPWNLQCSVNLGPSTTFLYGRMKGHRVLEVGMT*NYTEF 34
SEREGGL QRAFI*D+ S* E W+L C VNL PS+ FLYGRMKGH+V E GM+* T+F
Sbjct: 476 SEREGGLRQRAFI*DQIS*L*ELWSLPCMVNLDPSSMFLYGRMKGHQVFEAGMS*RCTKF 297
Query: 33 TQ 28
TQ
Sbjct: 296 TQ 291
Score = 166 bits (358), Expect = 8e-041
Identities = 78/122 (63%), Positives = 94/122 (77%)
Frame = -3 / -2
Query: 386 WSI*FFQSSYRHGSGSFILSSLYTYCYQDSFKGGKDSKIYKSTL*LFQQKGDSLPLVYPR 207
WSI*FFQ +Y HGSGSFILS L+TY Y+DS K K++KIY+S +*L QQK +S+PL+ R
Sbjct: 649 WSI*FFQGTY*HGSGSFILSPLHTYRYEDSRKRRKNAKIYESLM*LLQQKRNSIPLICQR 470
Query: 206 ERAV*VREHLYEIGPVNTGSLGICSAR*I*VPQPRSCMEG*KATEY*RWG*PETIQNLPS 27
ERAV* REHL +I VN S G+C A *I*+PQ SCMEG*KA +Y R G* E +QNLP+
Sbjct: 469 ERAV*DREHLSKIRSVNFRSFGVCRAW*I*IPQACSCMEG*KAIKYSRRG*VEGVQNLPN 290
Query: 26 RS 21
RS
Sbjct: 289 RS 284
Score = 72.5 bits (152), Expect(2) = 1e-027
Identities = 32/52 (61%), Positives = 37/52 (71%)
Frame = +1 / +3
Query: 238 FCWNSYKVDL*ILESFPPLNESW*QYVYKDDKMNEPLPCR*EL*KNQMDHHT 393
FCW++Y D *IL F ES *+YV K D+MNEPLPC+* *KNQMDH T
Sbjct: 501 FCWSNYMSDS*ILAFFLLFRESS*RYVCKGDRMNEPLPCQ*VP*KNQMDHRT 656
Score = 70.3 bits (147), Expect(2) = 1e-027
Identities = 33/54 (61%), Positives = 35/54 (64%)
Frame = +1 / +3
Query: 22 DRLGKFCIVSGHPHL*YSVAFHPSIQERG*GT*IYRALQIPRLPVLTGPISYKC 183
D LGKFC S HP L Y +AFHPSIQE *G *IY A Q P+L LT I KC
Sbjct: 285 DLLGKFCTPSTHPRLEYLMAFHPSIQEHA*GI*IYHARQTPKLLKLTDLILDKC 446
>emb|AJ582182.1|TAE582182 Triticum aestivum mRNA for putative glycoprotein
3-alpha-L-fucosyltransferase (core3ft gene)
Length = 1750
Score = 286 bits (618), Expect = 1e-076
Identities = 115/131 (87%), Positives = 124/131 (94%)
Frame = -1 / +2
Query: 394 KYDGPSDSFKALIDMAAVHSSCRLCIHIATKIHLKEERTPKFTNRPCSCSSKKGTVYHLF 215
KYDGPSDSFKALIDMAAVHSSCRLCIHIATKIH KEERTPKF NR CSCSSK+GTVYHLF
Sbjct: 1052 KYDGPSDSFKALIDMAAVHSSCRLCIHIATKIHEKEERTPKFMNRSCSCSSKRGTVYHLF 1231
Query: 214 IRERGRFKSESIYMRSGQLTLGALESAVLGKFRSLNHVPVWKDERPPSIRGGDDLKLYRI 35
+RERGRFK+ESIY+RS QLTLGALESAV GKFRSL HVPVWKDERP SIRGGD+LK+Y+I
Sbjct: 1232 VRERGRFKTESIYLRSDQLTLGALESAVHGKFRSLKHVPVWKDERPSSIRGGDELKVYKI 1411
Query: 34 YPVGLTQRQAL 2
YP+GLT+RQAL
Sbjct: 1412 YPIGLTERQAL 1444
Score = 198 bits (426), Expect = 3e-050
Identities = 92/125 (73%), Positives = 95/125 (76%)
Frame = +3 / -2
Query: 18 VRPTG*ILYSFRXXXXXXXXXXXXFHTGTWLRDLNLPSTADSKAPSVNWPDLI*MLSDLN 197
VRP G*ILY+F FHTGT LRDLNLP TADSKAP VN DL *MLS LN
Sbjct: 1428 VRPIG*ILYTFNSSPPRILDGLSSFHTGTCLRDLNLPCTADSKAPKVN*SDLR*MLSVLN 1249
Query: 198 RPLSRINKW*TVPFLLEQLQGRFVNFGVLSSFK*ILVAICIQRRQDE*TAAMSIRALKES 377
RPLS NKW TVP LLEQL RF+NFGVLSSF *I VAIC+QRRQDE*TAAMSI ALKES
Sbjct: 1248 RPLSLTNKWYTVPLLLEQLHERFINFGVLSSFS*IFVAICMQRRQDE*TAAMSISALKES 1069
Query: 378 DGPSY 392
DGPSY
Sbjct: 1068 DGPSY 1054
Score = 180 bits (388), Expect = 6e-045
Identities = 82/129 (63%), Positives = 91/129 (70%)
Frame = +2 / -1
Query: 8 LTLC*TDWVNSV*FQVIPTSNTRWPFILPYRNVVEGPKFTEHCRFQGSQC*LARSHINAL 187
L+ C T WVN V Q+IP SNT WPFILPYRN++EG KFT H R Q S *L S INAL
Sbjct: 1438 LSFCKTYWVNFVHLQLIPASNT*WPFILPYRNMLEGSKFTMHGRLQSS*S*LI*S*INAL 1259
Query: 188 *LKPPSLSDKQVVNCPLFAGTATRSICKFWSPFLL*MNLGSNMYTKTTR*MNRCHVDKSF 367
LKPPSLSDK VV C FAG T +I KFW F +NL S+MY K T *MNRCHV+K
Sbjct: 1258 CLKPPSLSDK*VVYCSSFAGATT*AIHKFWRSFFFFVNLRSDMYAKATG*MNRCHVNKCL 1079
Query: 368 ERIRWTIIL 394
ERIRWTI+L
Sbjct: 1078 ERIRWTIVL 1052
Score = 170 bits (365), Expect = 9e-042
Identities = 79/122 (64%), Positives = 89/122 (72%)
Frame = -2 / +3
Query: 393 SMMVHLILSKLLSTWQRFIHLVVFVYILLPRFI*RRKGLQNLQIDLVAVPAKRGQFTTCL 214
S MVHLILS+ L TWQRFIH V F YI L RF ++K QNL I V PAK Q+TT L
Sbjct: 1053 STMVHLILSRHLLTWQRFIHPVAFAYISLRRFTKKKKERQNL*IAHVVAPAKEEQYTTYL 1232
Query: 213 SEREGGLSQRAFI*DRAS*HWEPWNLQCSVNLGPSTTFLYGRMKGHRVLEVGMT*NYTEF 34
SEREGGL QRAFI*D+ S* E W+L C VNL PS+ FLYGRMKGH+V E GM+* T+F
Sbjct: 1233 SEREGGLRQRAFI*DQIS*L*ELWSLPCMVNLDPSSMFLYGRMKGHQVFEAGMS*RCTKF 1412
Query: 33 TQ 28
TQ
Sbjct: 1413 TQ 1418
Score = 166 bits (358), Expect = 8e-041
Identities = 78/122 (63%), Positives = 94/122 (77%)
Frame = -3 / +1
Query: 386 WSI*FFQSSYRHGSGSFILSSLYTYCYQDSFKGGKDSKIYKSTL*LFQQKGDSLPLVYPR 207
WSI*FFQ +Y HGSGSFILS L+TY Y+DS K K++KIY+S +*L QQK +S+PL+ R
Sbjct: 1060 WSI*FFQGTY*HGSGSFILSPLHTYRYEDSRKRRKNAKIYESLM*LLQQKRNSIPLICQR 1239
Query: 206 ERAV*VREHLYEIGPVNTGSLGICSAR*I*VPQPRSCMEG*KATEY*RWG*PETIQNLPS 27
ERAV* REHL +I VN S G+C A *I*+PQ SCMEG*KA +Y R G* E +QNLP+
Sbjct: 1240 ERAV*DREHLSKIRSVNFRSFGVCRAW*I*IPQACSCMEG*KAIKYSRRG*VEGVQNLPN 1419
Query: 26 RS 21
RS
Sbjct: 1420 RS 1425
Score = 72.5 bits (152), Expect(2) = 1e-027
Identities = 32/52 (61%), Positives = 37/52 (71%)
Frame = +1 / -3
Query: 238 FCWNSYKVDL*ILESFPPLNESW*QYVYKDDKMNEPLPCR*EL*KNQMDHHT 393
FCW++Y D *IL F ES *+YV K D+MNEPLPC+* *KNQMDH T
Sbjct: 1208 FCWSNYMSDS*ILAFFLLFRESS*RYVCKGDRMNEPLPCQ*VP*KNQMDHRT 1053
Score = 70.3 bits (147), Expect(2) = 1e-027
Identities = 33/54 (61%), Positives = 35/54 (64%)
Frame = +1 / -3
Query: 22 DRLGKFCIVSGHPHL*YSVAFHPSIQERG*GT*IYRALQIPRLPVLTGPISYKC 183
D LGKFC S HP L Y +AFHPSIQE *G *IY A Q P+L LT I KC
Sbjct: 1424 DLLGKFCTPSTHPRLEYLMAFHPSIQEHA*GI*IYHARQTPKLLKLTDLILDKC 1263
>gb|CD907374.1|CD907374 G468.106L19R010929 G468 Triticum aestivum cDNA clone G468106L19,
mRNA sequence
Length = 769
Score = 257 bits (555), Expect(2) = 1e-071
Identities = 103/123 (83%), Positives = 113/123 (91%)
Frame = -1 / -3
Query: 370 FKALIDMAAVHSSCRLCIHIATKIHLKEERTPKFTNRPCSCSSKKGTVYHLFIRERGRFK 191
F+ DMAAVHSSCRLCIHIATKIH KEERTPKF NR CSCSSK+GTVYHLF+RERGRFK
Sbjct: 641 FQGTYDMAAVHSSCRLCIHIATKIHEKEERTPKFMNRSCSCSSKRGTVYHLFVRERGRFK 462
Query: 190 SESIYMRSGQLTLGALESAVLGKFRSLNHVPVWKDERPPSIRGGDDLKLYRIYPVGLTQR 11
+ESIY+RS QLTLGALESAV GKFRSL HVPVWKDERP SIRGGD+LK+Y+IYP+GLT+R
Sbjct: 461 TESIYLRSDQLTLGALESAVHGKFRSLKHVPVWKDERPSSIRGGDELKVYKIYPIGLTER 282
Query: 10 QAL 2
QAL
Sbjct: 281 QAL 273
Score = 172 bits (371), Expect(2) = 5e-045
Identities = 81/113 (71%), Positives = 84/113 (74%)
Frame = +3 / +1
Query: 18 VRPTG*ILYSFRXXXXXXXXXXXXFHTGTWLRDLNLPSTADSKAPSVNWPDLI*MLSDLN 197
VRP G*ILY+F FHTGT LRDLNLP TADSKAP VN DL *MLS LN
Sbjct: 289 VRPIG*ILYTFNSSPPRILDGLSSFHTGTCLRDLNLPCTADSKAPKVN*SDLR*MLSVLN 468
Query: 198 RPLSRINKW*TVPFLLEQLQGRFVNFGVLSSFK*ILVAICIQRRQDE*TAAMS 356
RPLS NKW TVP LLEQL RF+NFGVLSSF *I VAIC+QRRQDE*TAAMS
Sbjct: 469 RPLSLTNKWYTVPLLLEQLHERFINFGVLSSFS*IFVAICMQRRQDE*TAAMS 627
Score = 157 bits (337), Expect(2) = 1e-039
Identities = 73/116 (62%), Positives = 80/116 (68%)
Frame = +2 / +3
Query: 8 LTLC*TDWVNSV*FQVIPTSNTRWPFILPYRNVVEGPKFTEHCRFQGSQC*LARSHINAL 187
L+ C T WVN V Q+IP SNT WPFILPYRN++EG KFT H R Q S *L S INAL
Sbjct: 279 LSFCKTYWVNFVHLQLIPASNT*WPFILPYRNMLEGSKFTMHGRLQSS*S*LI*S*INAL 458
Query: 188 *LKPPSLSDKQVVNCPLFAGTATRSICKFWSPFLL*MNLGSNMYTKTTR*MNRCHV 355
LKPPSLSDK VV C FAG T +I KFW F +NL S+MY K T *MNRCHV
Sbjct: 459 CLKPPSLSDK*VVYCSSFAGATT*AIHKFWRSFFFFVNLRSDMYAKATG*MNRCHV 626
Score = 156 bits (335), Expect(2) = 1e-038
Identities = 72/113 (63%), Positives = 81/113 (71%)
Frame = -2 / -1
Query: 366 KLLSTWQRFIHLVVFVYILLPRFI*RRKGLQNLQIDLVAVPAKRGQFTTCLSEREGGLSQ 187
K L TWQRFIH V F YI L RF ++K QNL I V PAK Q+TT LSEREGGL Q
Sbjct: 637 KALMTWQRFIHPVAFAYISLRRFTKKKKERQNL*IAHVVAPAKEEQYTTYLSEREGGLRQ 458
Query: 186 RAFI*DRAS*HWEPWNLQCSVNLGPSTTFLYGRMKGHRVLEVGMT*NYTEFTQ 28
RAFI*D+ S* E W+L C VNL PS+ FLYGRMKGH+V E GM+* T+FTQ
Sbjct: 457 RAFI*DQIS*L*ELWSLPCMVNLDPSSMFLYGRMKGHQVFEAGMS*RCTKFTQ 299
Score = 148 bits (317), Expect = 4e-035
Identities = 70/111 (63%), Positives = 85/111 (76%)
Frame = -3 / -2
Query: 353 HGSGSFILSSLYTYCYQDSFKGGKDSKIYKSTL*LFQQKGDSLPLVYPRERAV*VREHLY 174
HGSGSFILS L+TY Y+DS K K++KIY+S +*L QQK +S+PL+ RERAV* REHL
Sbjct: 624 HGSGSFILSPLHTYRYEDSRKRRKNAKIYESLM*LLQQKRNSIPLICQRERAV*DREHLS 445
Query: 173 EIGPVNTGSLGICSAR*I*VPQPRSCMEG*KATEY*RWG*PETIQNLPSRS 21
+I VN S G+C A *I*+PQ SCMEG*KA +Y R G* E +QNLP+RS
Sbjct: 444 KIRSVNFRSFGVCRAW*I*IPQACSCMEG*KAIKYSRRG*VEGVQNLPNRS 292
Score = 70.3 bits (147), Expect(3) = 2e-023
Identities = 33/54 (61%), Positives = 35/54 (64%)
Frame = +1 / +2
Query: 22 DRLGKFCIVSGHPHL*YSVAFHPSIQERG*GT*IYRALQIPRLPVLTGPISYKC 183
D LGKFC S HP L Y +AFHPSIQE *G *IY A Q P+L LT I KC
Sbjct: 293 DLLGKFCTPSTHPRLEYLMAFHPSIQEHA*GI*IYHARQTPKLLKLTDLILDKC 454
Score = 55.1 bits (114), Expect(3) = 2e-023
Identities = 23/39 (58%), Positives = 27/39 (69%)
Frame = +1 / +2
Query: 238 FCWNSYKVDL*ILESFPPLNESW*QYVYKDDKMNEPLPC 354
FCW++Y D *IL F ES *+YV K D+MNEPLPC
Sbjct: 509 FCWSNYMSDS*ILAFFLLFRESS*RYVCKGDRMNEPLPC 625
Score = 32.7 bits (65), Expect(2) = 1e-071
Identities = 12/13 (92%), Positives = 13/13 (100%)
Frame = -1 / -1
Query: 394 KYDGPSDSFKALI 356
KYDGPSDSFKAL+
Sbjct: 664 KYDGPSDSFKALM 626
Score = 28.1 bits (55), Expect(2) = 5e-045
Identities = 11/12 (91%), Positives = 11/12 (91%)
Frame = +3 / +3
Query: 357 IRALKESDGPSY 392
I ALKESDGPSY
Sbjct: 627 ISALKESDGPSY 662
Score = 25.8 bits (50), Expect(2) = 1e-039
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = +2 / +2
Query: 359 KSFERIRWTIIL 394
K ERIRWTI+L
Sbjct: 629 KCLERIRWTIVL 664
Score = 23.5 bits (45), Expect(2) = 1e-038
Identities = 8/10 (80%), Positives = 9/10 (90%)
Frame = -3 / -3
Query: 386 WSI*FFQSSY 357
WSI*FFQ +Y
Sbjct: 656 WSI*FFQGTY 627
Score = 21.7 bits (41), Expect(3) = 2e-023
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = +1 / +1
Query: 367 *KNQMDHHT 393
*KNQMDH T
Sbjct: 637 *KNQMDHRT 663
>gb|CD907433.1|CD907433 G468.106O06F010813 G468 Triticum aestivum cDNA clone G468106O06,
mRNA sequence
Length = 653
Score = 218 bits (470), Expect = 3e-056
Identities = 89/101 (88%), Positives = 93/101 (92%)
Frame = -1 / +3
Query: 394 KYDGPSDSFKALIDMAAVHSSCRLCIHIATKIHLKEERTPKFTNRPCSCSSKKGTVYHLF 215
KYDGPSDSFKALIDMAAVHSSCRLCIHIATKIH KEERTPKF NR CSCSSK+GTVYHLF
Sbjct: 351 KYDGPSDSFKALIDMAAVHSSCRLCIHIATKIHEKEERTPKFMNRSCSCSSKRGTVYHLF 530
Query: 214 IRERGRFKSESIYMRSGQLTLGALESAVLGKFRSLNHVPVW 92
+RERGRFK+ESIY+RS QLTLGA ESA GKFRSL HVPVW
Sbjct: 531 VRERGRFKTESIYLRSDQLTLGAWESAGHGKFRSLKHVPVW 653
Score = 175 bits (376), Expect = 3e-043
Identities = 80/100 (80%), Positives = 83/100 (83%)
Frame = +3 / -2
Query: 93 HTGTWLRDLNLPSTADSKAPSVNWPDLI*MLSDLNRPLSRINKW*TVPFLLEQLQGRFVN 272
HTGT LRDLNLP ADS+AP VN DL *MLS LNRPLS NKW TVP LLEQL RF+N
Sbjct: 652 HTGTCLRDLNLPCPADSQAPKVN*SDLR*MLSVLNRPLSLTNKWYTVPLLLEQLHERFIN 473
Query: 273 FGVLSSFK*ILVAICIQRRQDE*TAAMSIRALKESDGPSY 392
FGVLSSF *I VAIC+QRRQDE*TAAMSI ALKESDGPSY
Sbjct: 472 FGVLSSFS*IFVAICMQRRQDE*TAAMSISALKESDGPSY 353
Score = 137 bits (293), Expect = 7e-032
Identities = 63/98 (64%), Positives = 76/98 (77%)
Frame = -3 / +2
Query: 386 WSI*FFQSSYRHGSGSFILSSLYTYCYQDSFKGGKDSKIYKSTL*LFQQKGDSLPLVYPR 207
WSI*FFQ +Y HGSGSFILS L+TY Y+DS K K++KIY+S +*L QQK +S+PL+ R
Sbjct: 359 WSI*FFQGTY*HGSGSFILSPLHTYRYEDSRKRRKNAKIYESLM*LLQQKRNSIPLICQR 538
Query: 206 ERAV*VREHLYEIGPVNTGSLGICSAR*I*VPQPRSCM 93
ERAV* REHL +I VN SLG+C A *I*+PQ SCM
Sbjct: 539 ERAV*DREHLSKIRSVNFRSLGVCRAW*I*IPQACSCM 652
Score = 131 bits (281), Expect = 3e-030
Identities = 62/101 (61%), Positives = 69/101 (68%)
Frame = +2 / -1
Query: 92 PYRNVVEGPKFTEHCRFQGSQC*LARSHINAL*LKPPSLSDKQVVNCPLFAGTATRSICK 271
PYRN++EG KFT R S *L S INAL LKPPSLSDK VV C FAG T +I K
Sbjct: 653 PYRNMLEGSKFTMPGRLPSS*S*LI*S*INALCLKPPSLSDK*VVYCSSFAGATT*AIHK 474
Query: 272 FWSPFLL*MNLGSNMYTKTTR*MNRCHVDKSFERIRWTIIL 394
FW F +NL S+MY K T *MNRCHV+K ERIRWTI+L
Sbjct: 473 FWRSFFFFVNLRSDMYAKATG*MNRCHVNKCLERIRWTIVL 351
Score = 122 bits (262), Expect = 1e-027
Identities = 62/100 (62%), Positives = 69/100 (69%)
Frame = -2 / +1
Query: 393 SMMVHLILSKLLSTWQRFIHLVVFVYILLPRFI*RRKGLQNLQIDLVAVPAKRGQFTTCL 214
S MVHLILS+ L TWQRFIH V F YI L RF ++K QNL I V PAK Q+TT L
Sbjct: 352 STMVHLILSRHLLTWQRFIHPVAFAYISLRRFTKKKKERQNL*IAHVVAPAKEEQYTTYL 531
Query: 213 SEREGGLSQRAFI*DRAS*HWEPWNLQCSVNLGPSTTFLY 94
SEREGGL QRAFI*D+ S* E +L VNL PS+ FLY
Sbjct: 532 SEREGGLRQRAFI*DQIS*L*ELGSLPGMVNLDPSSMFLY 651
Score = 72.5 bits (152), Expect(2) = 2e-016
Identities = 32/52 (61%), Positives = 37/52 (71%)
Frame = +1 / -3
Query: 238 FCWNSYKVDL*ILESFPPLNESW*QYVYKDDKMNEPLPCR*EL*KNQMDHHT 393
FCW++Y D *IL F ES *+YV K D+MNEPLPC+* *KNQMDH T
Sbjct: 507 FCWSNYMSDS*ILAFFLLFRESS*RYVCKGDRMNEPLPCQ*VP*KNQMDHRT 352
Score = 32.2 bits (64), Expect(2) = 2e-016
Identities = 17/30 (56%), Positives = 18/30 (60%)
Frame = +1 / -3
Query: 94 IQERG*GT*IYRALQIPRLPVLTGPISYKC 183
IQE *G *IY A Q P+L LT I KC
Sbjct: 651 IQEHA*GI*IYHARQTPKLLKLTDLILDKC 562
>gb|CA602908.1|CA602908 wr1.pk0007.e11 wr1 Triticum aestivum cDNA clone wr1.pk0007.e11 5'
end, mRNA sequence
Length = 487
Score = 206 bits (445), Expect = 8e-053
Identities = 82/97 (84%), Positives = 91/97 (93%)
Frame = -1 / +1
Query: 292 KEERTPKFTNRPCSCSSKKGTVYHLFIRERGRFKSESIYMRSGQLTLGALESAVLGKFRS 113
KEERTPKF NR CSCSSK+GTVYHLF+RERGRFK+ESIY+RS QLTLGALESAV GKFRS
Sbjct: 1 KEERTPKFMNRSCSCSSKRGTVYHLFVRERGRFKTESIYLRSDQLTLGALESAVHGKFRS 180
Query: 112 LNHVPVWKDERPPSIRGGDDLKLYRIYPVGLTQRQAL 2
L HVPVWKDERP SIRGGD+LK+Y+IYP+GLT+RQAL
Sbjct: 181 LKHVPVWKDERPSSIRGGDELKVYKIYPIGLTERQAL 291
Score = 133 bits (284), Expect = 1e-030
Identities = 62/91 (68%), Positives = 64/91 (70%)
Frame = +3 / -3
Query: 18 VRPTG*ILYSFRXXXXXXXXXXXXFHTGTWLRDLNLPSTADSKAPSVNWPDLI*MLSDLN 197
VRP G*ILY+F FHTGT LRDLNLP TADSKAP VN DL *MLS LN
Sbjct: 275 VRPIG*ILYTFNSSPPRILDGLSSFHTGTCLRDLNLPCTADSKAPKVN*SDLR*MLSVLN 96
Query: 198 RPLSRINKW*TVPFLLEQLQGRFVNFGVLSS 290
RPLS NKW TVP LLEQL RF+NFGVLSS
Sbjct: 95 RPLSLTNKWYTVPLLLEQLHERFINFGVLSS 3
Score = 126 bits (269), Expect = 1e-028
Identities = 59/93 (63%), Positives = 64/93 (68%)
Frame = +2 / -2
Query: 8 LTLC*TDWVNSV*FQVIPTSNTRWPFILPYRNVVEGPKFTEHCRFQGSQC*LARSHINAL 187
L+ C T WVN V Q+IP SNT WPFILPYRN++EG KFT H R Q S *L S INAL
Sbjct: 285 LSFCKTYWVNFVHLQLIPASNT*WPFILPYRNMLEGSKFTMHGRLQSS*S*LI*S*INAL 106
Query: 188 *LKPPSLSDKQVVNCPLFAGTATRSICKFWSPF 286
LKPPSLSDK VV C FAG T +I KFW F
Sbjct: 105 CLKPPSLSDK*VVYCSSFAGATT*AIHKFWRSF 7
Score = 122 bits (260), Expect = 3e-027
Identities = 56/88 (63%), Positives = 65/88 (73%)
Frame = -2 / +2
Query: 291 RRKGLQNLQIDLVAVPAKRGQFTTCLSEREGGLSQRAFI*DRAS*HWEPWNLQCSVNLGP 112
++K QNL I V PAK Q+TT LSEREGGL QRAFI*D+ S* E W+L C VNL P
Sbjct: 2 KKKERQNL*IAHVVAPAKEEQYTTYLSEREGGLRQRAFI*DQIS*L*ELWSLPCMVNLDP 181
Query: 111 STTFLYGRMKGHRVLEVGMT*NYTEFTQ 28
S+ FLYGRMKGH+V E GM+* T+FTQ
Sbjct: 182 SSMFLYGRMKGHQVFEAGMS*RCTKFTQ 265
Score = 112 bits (240), Expect = 1e-024
Identities = 54/88 (61%), Positives = 67/88 (76%)
Frame = -3 / +3
Query: 284 KDSKIYKSTL*LFQQKGDSLPLVYPRERAV*VREHLYEIGPVNTGSLGICSAR*I*VPQP 105
K++KIY+S +*L QQK +S+PL+ RERAV* REHL +I VN S G+C A *I*+PQ
Sbjct: 9 KNAKIYESLM*LLQQKRNSIPLICQRERAV*DREHLSKIRSVNFRSFGVCRAW*I*IPQA 188
Query: 104 RSCMEG*KATEY*RWG*PETIQNLPSRS 21
SCMEG*KA +Y R G* E +QNLP+RS
Sbjct: 189 CSCMEG*KAIKYSRRG*VEGVQNLPNRS 272
Score = 70.3 bits (147), Expect(2) = 9e-014
Identities = 33/54 (61%), Positives = 35/54 (64%)
Frame = +1 / -1
Query: 22 DRLGKFCIVSGHPHL*YSVAFHPSIQERG*GT*IYRALQIPRLPVLTGPISYKC 183
D LGKFC S HP L Y +AFHPSIQE *G *IY A Q P+L LT I KC
Sbjct: 271 DLLGKFCTPSTHPRLEYLMAFHPSIQEHA*GI*IYHARQTPKLLKLTDLILDKC 110
Score = 24.9 bits (48), Expect(2) = 9e-014
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = +1 / -1
Query: 238 FCWNSYKVDL*ILESF 285
FCW++Y D *IL F
Sbjct: 55 FCWSNYMSDS*ILAFF 8
>gb|CA661821.1|CA661821 wlmk1.pk0008.b8 wlmk1 Triticum aestivum cDNA clone wlmk1.pk0008.b8
5' end, mRNA sequence
Length = 600
Score = 118 bits (252), Expect(2) = 5e-031
Identities = 50/64 (78%), Positives = 52/64 (81%)
Frame = -1 / +1
Query: 394 KYDGPSDSFKALIDMAAVHSSCRLCIHIATKIHLKEERTPKFTNRPCSCSSKKGTVYHLF 215
KYDGPSDSFKALIDMAAVHSSCRLCIHIATK H KEE+TPK NR CSCS +K T L
Sbjct: 130 KYDGPSDSFKALIDMAAVHSSCRLCIHIATKDHEKEEKTPKLMNRSCSCSKQKRTYTLLS 309
Query: 214 IRER 203
RER
Sbjct: 310 RRER 321
Score = 95.5 bits (202), Expect(2) = 3e-024
Identities = 43/54 (79%), Positives = 45/54 (83%)
Frame = +3 / -2
Query: 231 VPFLLEQLQGRFVNFGVLSSFK*ILVAICIQRRQDE*TAAMSIRALKESDGPSY 392
V F LEQL RF+NFGV SSF * VAIC+QRRQDE*TAAMSI ALKESDGPSY
Sbjct: 293 VLFCLEQLHERFINFGVFSSFS*SFVAICMQRRQDE*TAAMSISALKESDGPSY 132
Score = 77.1 bits (162), Expect(2) = 9e-017
Identities = 36/63 (57%), Positives = 46/63 (73%)
Frame = -3 / +3
Query: 392 V*WSI*FFQSSYRHGSGSFILSSLYTYCYQDSFKGGKDSKIYKSTL*LFQQKGDSLPLVY 213
V*WSI*FFQ +Y HGSGSFILS L+TY Y+ S K K++K+ +S +*LFQ K + +V
Sbjct: 132 V*WSI*FFQGTY*HGSGSFILSPLHTYRYERS*KRRKNTKVNESLM*LFQAKENIYTIVQ 311
Query: 212 PRE 204
RE
Sbjct: 312 KRE 320
Score = 73.0 bits (153), Expect(2) = 1e-015
Identities = 35/65 (53%), Positives = 38/65 (58%)
Frame = +2 / -1
Query: 200 PSLSDKQVVNCPLFAGTATRSICKFWSPFLL*MNLGSNMYTKTTR*MNRCHVDKSFERIR 379
P LS Q C L GT T +I W F M S+MY K T *MNRCHV+K ERIR
Sbjct: 324 PPLSSGQ*CICSLLLGTTT*AIH*LWCFFFFFMIFRSDMYAKATG*MNRCHVNKCLERIR 145
Query: 380 WTIIL 394
WTIIL
Sbjct: 144 WTIIL 130
Score = 69.3 bits (145), Expect = 2e-011
Identities = 34/65 (52%), Positives = 41/65 (63%)
Frame = -2 / +2
Query: 393 SMMVHLILSKLLSTWQRFIHLVVFVYILLPRFI*RRKGLQNLQIDLVAVPAKRGQFTTCL 214
SMMVHLILS+ L TWQRFIH V F YI L + + ++K Q+ I V VP+KR C
Sbjct: 131 SMMVHLILSRHLLTWQRFIHPVAFAYISLRKIMKKKKKHQS**IAHVVVPSKREHIHYCP 310
Query: 213 SEREG 199
ER G
Sbjct: 311 EERGG 325
Score = 65.7 bits (137), Expect(2) = 5e-013
Identities = 29/52 (55%), Positives = 35/52 (67%)
Frame = +1 / -3
Query: 238 FCWNSYKVDL*ILESFPPLNESW*QYVYKDDKMNEPLPCR*EL*KNQMDHHT 393
F WN+Y D L F ++ *+YV K D+MNEPLPC+* *KNQMDHHT
Sbjct: 286 FAWNNYMSDSLTLVFFLLFHDLS*RYVCKGDRMNEPLPCQ*VP*KNQMDHHT 131
Score = 42.8 bits (87), Expect = 0.002
Identities = 22/55 (40%), Positives = 26/55 (47%)
Frame = -1 / +1
Query: 253 SCSSKKGTVYHLFIRERGRFKSESIYMRSGQLTLGALESAVLGKFRSLNHVPVWK 89
SCS K + + R R + +TL L SAV G F SL HVPVWK
Sbjct: 265 SCSCSKQKRTYTLLSRRERRFKTETLSKIRSVTLRTLGSAVHGXFXSLKHVPVWK 429
Score = 35.4 bits (71), Expect(2) = 5e-031
Identities = 13/21 (61%), Positives = 14/21 (66%)
Frame = -2 / +2
Query: 144 WNLQCSVNLGPSTTFLYGRMK 82
W+L C NL PS FLYGR K
Sbjct: 374 WDLPCMGNLXPSNMFLYGRXK 436
Score = 35.4 bits (71), Expect(2) = 3e-024
Identities = 15/23 (65%), Positives = 15/23 (65%)
Frame = +3 / -2
Query: 90 FHTGTWLRDLNLPSTADSKAPSV 158
FHTGT LR LN P TAD K V
Sbjct: 428 FHTGTCLRXLNXPCTADPKVLKV 360
Score = 29.0 bits (57), Expect(2) = 1e-015
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +2 / -1
Query: 83 FILPYRNVVEGPKFTEHCRFQ 145
F LPYRN+ EG K H R Q
Sbjct: 435 FXLPYRNMFEGXKXPMHGRSQ 373
Score = 28.6 bits (56), Expect(2) = 9e-017
Identities = 13/19 (68%), Positives = 13/19 (68%)
Frame = -3 / +3
Query: 143 GICSAR*I*VPQPRSCMEG 87
GIC A I* PQ SCMEG
Sbjct: 375 GICRAWXI*XPQTCSCMEG 431
Score = 27.2 bits (53), Expect(2) = 5e-013
Identities = 13/20 (65%), Positives = 14/20 (70%)
Frame = +1 / -3
Query: 88 PSIQERG*GT*IYRALQIPR 147
PSIQE *G *I A QIP+
Sbjct: 430 PSIQEHV*GX*IXHARQIPK 371
>gb|CA502151.1|CA502151 WHE4043_D07_H13ZT Wheat meiotic anther cDNA library Triticum
aestivum cDNA clone WHE4043_D07_H13, mRNA sequence
Length = 534
Score = 132 bits (282), Expect = 2e-030
Identities = 54/66 (81%), Positives = 61/66 (92%)
Frame = -1 / +1
Query: 199 RFKSESIYMRSGQLTLGALESAVLGKFRSLNHVPVWKDERPPSIRGGDDLKLYRIYPVGL 20
R K+ESIY+RS QLTLGALESAV GKFRSL HVPVWKDERP SIRGGD+LK+Y+IYP+GL
Sbjct: 31 RPKTESIYLRSDQLTLGALESAVHGKFRSLKHVPVWKDERPSSIRGGDELKVYKIYPIGL 210
Query: 19 TQRQAL 2
T+RQAL
Sbjct: 211 TERQAL 228
Score = 83.5 bits (176), Expect = 1e-015
Identities = 39/63 (61%), Positives = 44/63 (69%)
Frame = +2 / -1
Query: 8 LTLC*TDWVNSV*FQVIPTSNTRWPFILPYRNVVEGPKFTEHCRFQGSQC*LARSHINAL 187
L+ C T WVN V Q+IP SNT WPFILPYRN++EG KFT H R Q S *L S INAL
Sbjct: 222 LSFCKTYWVNFVHLQLIPASNT*WPFILPYRNMLEGSKFTMHGRLQSS*S*LI*S*INAL 43
Query: 188 *LK 196
L+
Sbjct: 42 CLR 34
Score = 82.2 bits (173), Expect = 3e-015
Identities = 36/54 (66%), Positives = 42/54 (77%)
Frame = -2 / +2
Query: 189 QRAFI*DRAS*HWEPWNLQCSVNLGPSTTFLYGRMKGHRVLEVGMT*NYTEFTQ 28
QRAFI*D+ S* E W+L C VNL PS+ FLYGRMKGH+V E GM+* T+FTQ
Sbjct: 41 QRAFI*DQIS*L*ELWSLPCMVNLDPSSMFLYGRMKGHQVFEAGMS*RCTKFTQ 202
Score = 76.2 bits (160), Expect = 2e-013
Identities = 37/61 (60%), Positives = 38/61 (62%)
Frame = +3 / -2
Query: 18 VRPTG*ILYSFRXXXXXXXXXXXXFHTGTWLRDLNLPSTADSKAPSVNWPDLI*MLSDLN 197
VRP G*ILY+F FHTGT LRDLNLP TADSKAP VN DL *MLS
Sbjct: 212 VRPIG*ILYTFNSSPPRILDGLSSFHTGTCLRDLNLPCTADSKAPKVN*SDLR*MLSVFG 33
Query: 198 R 200
R
Sbjct: 32 R 30
Score = 73.5 bits (154), Expect = 1e-012
Identities = 35/56 (62%), Positives = 41/56 (73%)
Frame = -3 / +3
Query: 188 REHLYEIGPVNTGSLGICSAR*I*VPQPRSCMEG*KATEY*RWG*PETIQNLPSRS 21
REHL +I VN S G+C A *I*+PQ SCMEG*KA +Y R G* E +QNLP+RS
Sbjct: 42 REHLSKIRSVNFRSFGVCRAW*I*IPQACSCMEG*KAIKYSRRG*VEGVQNLPNRS 209
Score = 70.3 bits (147), Expect = 1e-011
Identities = 33/54 (61%), Positives = 35/54 (64%)
Frame = +1 / -3
Query: 22 DRLGKFCIVSGHPHL*YSVAFHPSIQERG*GT*IYRALQIPRLPVLTGPISYKC 183
D LGKFC S HP L Y +AFHPSIQE *G *IY A Q P+L LT I KC
Sbjct: 208 DLLGKFCTPSTHPRLEYLMAFHPSIQEHA*GI*IYHARQTPKLLKLTDLILDKC 47
>gb|CA635966.1|CA635966 wle1n.pk0100.d4 wle1n Triticum aestivum cDNA clone wle1n.pk0100.d4
5' end, mRNA sequence
Length = 579
Score = 32.7 bits (65), Expect = 2.1
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = -1 / +3
Query: 310 ATKIHLKEERTPKFTNRPCSCSSKKGTVY 224
ATK+HL R P F + P SSK +Y
Sbjct: 402 ATKVHLGSARVPAFASAPSKISSKPPRMY 488
>gb|CK209108.1|CK209108 FGAS020851 Triticum aestivum FGAS: Library 5 GATE 7 Triticum aestivum
cDNA, mRNA sequence
Length = 1129
Score = 25.4 bits (49), Expect(2) = 3.4
Identities = 9/20 (45%), Positives = 10/20 (50%)
Frame = -1 / +2
Query: 118 RSLNHVPVWKDERPPSIRGG 59
R+L P W PP I GG
Sbjct: 1016 RALFVTPTWSGAHPPGITGG 1075
Score = 25.4 bits (49), Expect(2) = 3.4
Identities = 8/26 (30%), Positives = 13/26 (50%)
Frame = -1 / +2
Query: 376 DSFKALIDMAAVHSSCRLCIHIATKI 299
D F+ + H CRLC+H+ +
Sbjct: 560 DLFQEAFLLLLGHCRCRLCLHVTVDL 637
>gb|CA660009.1|CA660009 wlm1.pk0014.c11 wlm1 Triticum aestivum cDNA clone wlm1.pk0014.c11
5' end, mRNA sequence
Length = 497
Score = 24.9 bits (48), Expect(2) = 3.4
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = -1 / -2
Query: 325 LCIHIATKIHLKEERTPK 272
L IHI+ +HLK R P+
Sbjct: 94 LSIHISCTVHLKISRAPQ 41
Score = 23.5 bits (45), Expect(2) = 3.4
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = -2 / -2
Query: 360 LSTWQRFIHLVVFVYILL 307
L+ QRFI LV+F +LL
Sbjct: 361 LAQQQRFITLVIFFXLLL 308
>gb|BJ313668.1|BJ313668 BJ313668 Y. Ogihara unpublished cDNA library, Wh_yf Triticum
aestivum cDNA clone whyf6m01 5', mRNA sequence
Length = 513
Score = 31.8 bits (63), Expect = 3.9
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = -1 / -1
Query: 379 SDSFKALIDMAAVHSSCRLCIHI 311
SDS A+ID ++ SC CIHI
Sbjct: 156 SDSSHAIIDFSSSRDSCGFCIHI 88
>gb|CD901776.1|CD901776 G356.104O07F010918 G356 Triticum aestivum cDNA clone G356104O07,
mRNA sequence
Length = 664
Score = 31.8 bits (63), Expect = 3.9
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = -1 / +1
Query: 100 PVWKDERPPSIRGGDDLKLYRIYPVGLTQRQAL 2
P W+DE+ RG + + R+ PVG R AL
Sbjct: 265 PQWRDEQQQVSRGYGEKRQQRVVPVGARGRDAL 363
>gb|CD901777.1|CD901777 G356.104O07R011024 G356 Triticum aestivum cDNA clone G356104O07,
mRNA sequence
Length = 634
Score = 31.8 bits (63), Expect = 3.9
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = -1 / -2
Query: 100 PVWKDERPPSIRGGDDLKLYRIYPVGLTQRQAL 2
P W+DE+ RG + + R+ PVG R AL
Sbjct: 441 PQWRDEQQQVSRGYGEKRQQRVVPVGARGRDAL 343
>gb|AL812294.1|AL812294 AL812294 e:310 Triticum aestivum cDNA clone A12_e310_plate_2, mRNA
sequence
Length = 525
Score = 31.8 bits (63), Expect = 3.9
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = -1 / -3
Query: 379 SDSFKALIDMAAVHSSCRLCIHI 311
SDS A+ID ++ SC CIHI
Sbjct: 178 SDSSHAIIDFSSSRDSCGFCIHI 110
>gb|CK217654.1|CK217654 FGAS029656 Triticum aestivum FGAS: Library 6 CAP GATE 1 Triticum
aestivum cDNA, mRNA sequence
Length = 1108
Score = 26.3 bits (51), Expect(2) = 4.5
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = -1 / +1
Query: 325 LCIHIATKIHLKEERTPKFTNRPCSCSSK 239
LC++++T H + TP NRP + S+
Sbjct: 472 LCMYVSTCQHEQSRCTPMHVNRPLNKISR 558
Score = 24.0 bits (46), Expect(2) = 4.5
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = -1 / +3
Query: 103 VPVWKDERPPSIRGGDDL 50
+PV RPPS+R G D+
Sbjct: 948 IPVQGYFRPPSLRSGRDI 1001
>gb|BE425773.1|BE425773 WHE0316_C04_C04ZS Wheat unstressed seedling shoot cDNA library
Triticum aestivum cDNA clone WHE0316_C04_C04, mRNA
sequence
Length = 658
Score = 30.9 bits (61), Expect = 7.3
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = +3 / +2
Query: 93 HTGTWLRDLNLPSTADSKAPSVNW 164
HTGTW D PS S+ PS ++
Sbjct: 380 HTGTWASDALAPSAGTSRRPSSSY 451
>gb|BF293594.1|BF293594 WHE2158_F09_L18ZS Triticum turgidum L. var. durum (durum wheat)
whole plant cDNA library Triticum turgidum cDNA clone
WHE2158_F09_L18, mRNA sequence
Length = 289
Score = 30.9 bits (61), Expect = 7.3
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +3 / +3
Query: 123 LPSTADSKAPSVNWPDLI 176
LP ++DS PS+ WPDLI
Sbjct: 105 LPFSSDSPLPSLPWPDLI 158
>gb|BU100954.1|BU100954 WHE3359_H02_O03ZS Chinese Spring aluminum-stressed root tip cDNA
library Triticum aestivum cDNA clone WHE3359_H02_O03,
mRNA sequence
Length = 629
Score = 30.9 bits (61), Expect = 7.3
Identities = 16/30 (53%), Positives = 17/30 (56%)
Frame = -2 / -3
Query: 282 GLQNLQIDLVAVPAKRGQFTTCLSEREGGL 193
GLQ+ DLV PA FT CL EGGL
Sbjct: 486 GLQDGIQDLVEQPAAPEFFTRCLEGSEGGL 397
Database: Triticum_nucl_with_EST.fasta
Posted date: May 2, 2006 3:43 PM
Number of letters in database: 367,240,239
Number of sequences in database: 636,343
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 380,143,748
Number of Sequences: 636343
Number of extensions: 4938462
Number of successful extensions: 164464
Number of sequences better than 10.0: 25
length of database: 122,413,413
effective HSP length: 51
effective length of database: 89,959,920
effective search space used: 7106833680
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)