TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= QCH17d04.yg.2.1
(637 letters)
Database: Triticum_nucl_with_EST.fasta
636,343 sequences; 367,240,239 total letters
Score E
Sequences producing significant alignments: (bits) Value
emb|AJ582182.1|TAE582182 Triticum aestivum mRNA for putativ... 433 e-120
gb|BQ167130.1|BQ167130 WHE0946_F09_K18ZY Wheat 5-15 DAP spi... 319 3e-086
gb|CD907374.1|CD907374 G468.106L19R010929 G468 Triticum aes... 255 2e-075
gb|CD907433.1|CD907433 G468.106O06F010813 G468 Triticum aes... 223 1e-057
gb|CA661821.1|CA661821 wlmk1.pk0008.b8 wlmk1 Triticum aesti... 206 5e-056
gb|CA602908.1|CA602908 wr1.pk0007.e11 wr1 Triticum aestivum... 204 6e-052
gb|CA502151.1|CA502151 WHE4043_D07_H13ZT Wheat meiotic anth... 132 5e-030
gb|BG263065.1|BG263065 WHE0946_F09_K18ZS Wheat 5-15 DAP spi... 102 4e-021
>emb|AJ582182.1|TAE582182 Triticum aestivum mRNA for putative glycoprotein
3-alpha-L-fucosyltransferase (core3ft gene)
Length = 1750
Score = 433 bits (939), Expect = e-120
Identities = 176/212 (83%), Positives = 190/212 (89%)
Frame = -1 / +2
Query: 637 RYRFSXXFEXXXEXDYXXEKFFQXXVXGSIPVVVGAPNIQEFXPGEGAILHIXXLDDVAS 458
RY+FS FE E DY EKFFQ V G+IPVVVGAPNIQEF PGEGAILHI LDDV S
Sbjct: 809 RYKFSLAFENSGEEDYVTEKFFQSLVTGAIPVVVGAPNIQEFSPGEGAILHIKELDDVIS 988
Query: 457 VAKTMKNIASNPDAFNQSLRWKYDGPSDSFKALIDMAAVHSSCRLCIHIATKIHLKEERT 278
VAKTMK+IASNPDAFNQSLRWKYDGPSDSFKALIDMAAVHSSCRLCIHIATKIH KEERT
Sbjct: 989 VAKTMKHIASNPDAFNQSLRWKYDGPSDSFKALIDMAAVHSSCRLCIHIATKIHEKEERT 1168
Query: 277 PKFTNRPCSCSTKKGTIYHLFIRERGRFKSESIYMRSGQLTLGALESAVLGKFRSLNHVP 98
PKF NR CSCS+K+GT+YHLF+RERGRFK+ESIY+RS QLTLGALESAV GKFRSL HVP
Sbjct: 1169 PKFMNRSCSCSSKRGTVYHLFVRERGRFKTESIYLRSDQLTLGALESAVHGKFRSLKHVP 1348
Query: 97 VWKDERPPSIRGGDDLKLYRIYPVGLTQRQAL 2
VWKDERP SIRGGD+LK+Y+IYP+GLT+RQAL
Sbjct: 1349 VWKDERPSSIRGGDELKVYKIYPIGLTERQAL 1444
Score = 320 bits (694), Expect = 7e-087
Identities = 150/206 (72%), Positives = 157/206 (76%)
Frame = +3 / -2
Query: 18 VRPTG*ILYNFRXXXXXXXXXXXXFHTGTWLRDLNLPSTADSKAPRVNWPDLM*MLSDLN 197
VRP G*ILY F FHTGT LRDLNLP TADSKAP+VN DL *MLS LN
Sbjct: 1428 VRPIG*ILYTFNSSPPRILDGLSSFHTGTCLRDLNLPCTADSKAPKVN*SDLR*MLSVLN 1249
Query: 198 RPLSRINKW*IVPFLVEQLQGRFVNFGVLSSFKWILVAICIQRRQDE*TAAMSIRALKES 377
RPLS NKW VP L+EQL RF+NFGVLSSF I VAIC+QRRQDE*TAAMSI ALKES
Sbjct: 1248 RPLSLTNKWYTVPLLLEQLHERFINFGVLSSFS*IFVAICMQRRQDE*TAAMSISALKES 1069
Query: 378 DGPSYFHLKD*LKASGFEAIFFIVLATEATSSSXLICNIAPSPGXNS*IFGAPTTTGIEP 557
DGPSYFHLKD*LKASGF+AI FIVLATE TSSS L+CNIAPSPG NS*IFGAPTTTG+ P
Sbjct: 1068 DGPSYFHLKD*LKASGFDAICFIVLATEMTSSSSLMCNIAPSPGENS*IFGAPTTTGMAP 889
Query: 558 XTXX*KNFSXX*SXSXXXSNXXLNL* 635
T *KNFS *S S S LNL*
Sbjct: 888 VTSD*KNFSVT*SSSPEFSKAKLNL* 811
Score = 250 bits (540), Expect = 1e-065
Identities = 111/169 (65%), Positives = 125/169 (73%)
Frame = +2 / -1
Query: 23 TDWVNSV*FQVIPTSNARWPFILPYRNVVEGPKFTEHCGFQGSQS*LA*SHVNAL*LKPP 202
T WVN V Q+IP SN WPFILPYRN++EG KFT H Q S S*L *S +NAL LKPP
Sbjct: 1423 TYWVNFVHLQLIPASNT*WPFILPYRNMLEGSKFTMHGRLQSS*S*LI*S*INALCLKPP 1244
Query: 203 SLSDK*VVNCSLFGGTATRTICKFWSPFLL*MDLGSNMYTKTTR*MNRCHVNKSFERIGW 382
SLSDK*VV CS F G T I KFW F ++L S+MY K T *MNRCHVNK ERI W
Sbjct: 1243 SLSDK*VVYCSSFAGATT*AIHKFWRSFFFFVNLRSDMYAKATG*MNRCHVNKCLERIRW 1064
Query: 383 TIILPPQRLIEGIRV*SNIFHCLSN*SNIIKLXNM*YCAFSRXKLLNIW 529
TI+LPPQRLI+ IR+ N+FHCLSN*++IIKL N+*YC FS KLLNIW
Sbjct: 1063 TIVLPPQRLIKSIRIRCNMFHCLSN*NDIIKLLNV*YCTFSWRKLLNIW 917
Score = 247 bits (533), Expect = 1e-064
Identities = 125/205 (60%), Positives = 145/205 (70%)
Frame = -3 / +1
Query: 635 LQIQXXI*XXX*XGLXX*KVFSVXSXRFYSGCCWCSKYSRVXSGRRRNITY*XA**CCFS 456
LQIQ * * L KVFSV +S C W +KYSRV S RR NIT+* A**C FS
Sbjct: 811 LQIQLGF*EFW*GRLCYRKVFSVTGNGGHSSCRWRTKYSRVFSRRRCNITH*GA**CHFS 990
Query: 455 C*DNEKYCFKP*CLQSIFEVEV*WSIRFFQSSY*HGSGSFILSSLYTYCYQDPFKGGKDS 276
C*DNE YC + *C SIFEVEV WSI FFQ +Y*HGSGSFILS L+TY Y+D K K++
Sbjct: 991 C*DNETYCIES*CF*SIFEVEVRWSI*FFQGTY*HGSGSFILSPLHTYRYEDSRKRRKNA 1170
Query: 275 KIYKSSL*LFHQKGNNLPLIYPRERAV*VREHLHEIRPVNSGSLGIRSAR*I*VPQPRSC 96
KIY+S +*L QK N++PLI RERAV* REHL +IR VN S G+ A *I*+PQ SC
Sbjct: 1171 KIYESLM*LLQQKRNSIPLICQRERAV*DREHLSKIRSVNFRSFGVCRAW*I*IPQACSC 1350
Query: 95 MEG*KATEH*RWG*PEIIQNLPSRS 21
MEG*KA ++ R G* E +QNLP+RS
Sbjct: 1351 MEG*KAIKYSRRG*VEGVQNLPNRS 1425
Score = 236 bits (510), Expect = 2e-061
Identities = 125/205 (60%), Positives = 137/205 (66%)
Frame = +1 / -3
Query: 22 DRLGKFCIISGHPHL*CSVAFHPSIQERG*GT*IYRALRIPRLPELTGLISCKCSLT*TA 201
D LGKFC S HP L +AFHPSIQE *G *IY A + P+L +LT LI KCSL+*TA
Sbjct: 1424 DLLGKFCTPSTHPRLEYLMAFHPSIQEHA*GI*IYHARQTPKLLKLTDLILDKCSLS*TA 1245
Query: 202 LSLG*ISGKLFPFWWNSYKDDL*ILESFPPLNGSW*QYVYKDDKMNEPLPCQ*EL*KNRM 381
LSL ISG LF F W++Y D *IL F S *+YV K D+MNEPLPCQ* *KN+M
Sbjct: 1244 LSL*QISGILFLFCWSNYMSDS*ILAFFLLFRESS*RYVCKGDRMNEPLPCQ*VP*KNQM 1065
Query: 382 DHHTSTSKID*RHQGLKQYFSLS*QLKQHHQAX*YVILRLLPEXTLEYLEHQQQPE*NLX 561
DH TSTSKID*+HQ QY SLS*QLK HHQA * VIL LL E TLEYL Q+Q E
Sbjct: 1064 DHRTSTSKID*KHQDSMQYVSLS*QLK*HHQAP*CVILHLLLEKTLEYLVRQRQLEWPPL 885
Query: 562 LXTEKTFXXHNPXXXXSQXXX*ICS 636
TEKTF HN SQ *ICS
Sbjct: 884 PVTEKTFL*HNLPHQNSQKPS*ICS 810
Score = 182 bits (391), Expect(2) = 1e-047
Identities = 84/128 (65%), Positives = 93/128 (72%)
Frame = -2 / +3
Query: 411 INL*GGSMMVHPILSKLLLTWQRFIHLVVFVYILLPRSI*RRKGLQNLQIVLVAVPPKRE 232
INL*GGS MVH ILS+ LLTWQRFIH V F YI L R ++K QNL I V P K E
Sbjct: 1035 INL*GGSTMVHLILSRHLLTWQRFIHPVAFAYISLRRFTKKKKERQNL*IAHVVAPAKEE 1214
Query: 231 QFTTYLSEREGGLSQRAFT*DQAS*LWEPWNPQCSVNLGPSTTFLYGRMKGHRALEVGMT 52
Q+TTYLSEREGGL QRAF *DQ S*L E W+ C VNL PS+ FLYGRMKGH+ E GM+
Sbjct: 1215 QYTTYLSEREGGLRQRAFI*DQIS*L*ELWSLPCMVNLDPSSMFLYGRMKGHQVFEAGMS 1394
Query: 51 *NYTEFTQ 28
* T+FTQ
Sbjct: 1395 *RCTKFTQ 1418
Score = 29.0 bits (57), Expect(2) = 1e-047
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = -2 / +3
Query: 528 QIFKSXLREKAQYY 487
QIFKS L+EK QYY
Sbjct: 918 QIFKSFLQEKVQYY 959
>gb|BQ167130.1|BQ167130 WHE0946_F09_K18ZY Wheat 5-15 DAP spike cDNA library Triticum
aestivum cDNA clone WHE0946_F09_K18, mRNA sequence
Length = 701
Score = 319 bits (690), Expect = 3e-086
Identities = 127/145 (87%), Positives = 138/145 (95%)
Frame = -1 / -3
Query: 436 IASNPDAFNQSLRWKYDGPSDSFKALIDMAAVHSSCRLCIHIATKIHLKEERTPKFTNRP 257
IASNPDAFNQSLRWKYDGPSDSFKALIDMAAVHSSCRLCIHIATKIH KEERTPKF NR
Sbjct: 699 IASNPDAFNQSLRWKYDGPSDSFKALIDMAAVHSSCRLCIHIATKIHEKEERTPKFMNRS 520
Query: 256 CSCSTKKGTIYHLFIRERGRFKSESIYMRSGQLTLGALESAVLGKFRSLNHVPVWKDERP 77
CSCS+K+GT+YHLF+RERGRFK+ESIY+RS QLTLGALESAV GKFRSL HVPVWKDERP
Sbjct: 519 CSCSSKRGTVYHLFVRERGRFKTESIYLRSDQLTLGALESAVHGKFRSLKHVPVWKDERP 340
Query: 76 PSIRGGDDLKLYRIYPVGLTQRQAL 2
SIRGGD+LK+Y+IYP+GLT+RQAL
Sbjct: 339 SSIRGGDELKVYKIYPIGLTERQAL 265
Score = 224 bits (484), Expect = 7e-058
Identities = 103/140 (73%), Positives = 108/140 (77%)
Frame = +3 / +2
Query: 18 VRPTG*ILYNFRXXXXXXXXXXXXFHTGTWLRDLNLPSTADSKAPRVNWPDLM*MLSDLN 197
VRP G*ILY F FHTGT LRDLNLP TADSKAP+VN DL *MLS LN
Sbjct: 281 VRPIG*ILYTFNSSPPRILDGLSSFHTGTCLRDLNLPCTADSKAPKVN*SDLR*MLSVLN 460
Query: 198 RPLSRINKW*IVPFLVEQLQGRFVNFGVLSSFKWILVAICIQRRQDE*TAAMSIRALKES 377
RPLS NKW VP L+EQL RF+NFGVLSSF I VAIC+QRRQDE*TAAMSI ALKES
Sbjct: 461 RPLSLTNKWYTVPLLLEQLHERFINFGVLSSFS*IFVAICMQRRQDE*TAAMSISALKES 640
Query: 378 DGPSYFHLKD*LKASGFEAI 437
DGPSYFHLKD*LKASGF+AI
Sbjct: 641 DGPSYFHLKD*LKASGFDAI 700
Score = 194 bits (419), Expect = 6e-049
Identities = 88/138 (63%), Positives = 98/138 (71%)
Frame = +2 / +1
Query: 23 TDWVNSV*FQVIPTSNARWPFILPYRNVVEGPKFTEHCGFQGSQS*LA*SHVNAL*LKPP 202
T WVN V Q+IP SN WPFILPYRN++EG KFT H Q S S*L *S +NAL LKPP
Sbjct: 286 TYWVNFVHLQLIPASNT*WPFILPYRNMLEGSKFTMHGRLQSS*S*LI*S*INALCLKPP 465
Query: 203 SLSDK*VVNCSLFGGTATRTICKFWSPFLL*MDLGSNMYTKTTR*MNRCHVNKSFERIGW 382
SLSDK*VV CS F G T I KFW F ++L S+MY K T *MNRCHVNK ERI W
Sbjct: 466 SLSDK*VVYCSSFAGATT*AIHKFWRSFFFFVNLRSDMYAKATG*MNRCHVNKCLERIRW 645
Query: 383 TIILPPQRLIEGIRV*SN 436
TI+LPPQRLI+ IR+ N
Sbjct: 646 TIVLPPQRLIKSIRIRCN 699
Score = 182 bits (391), Expect = 4e-045
Identities = 84/128 (65%), Positives = 93/128 (72%)
Frame = -2 / -1
Query: 411 INL*GGSMMVHPILSKLLLTWQRFIHLVVFVYILLPRSI*RRKGLQNLQIVLVAVPPKRE 232
INL*GGS MVH ILS+ LLTWQRFIH V F YI L R ++K QNL I V P K E
Sbjct: 674 INL*GGSTMVHLILSRHLLTWQRFIHPVAFAYISLRRFTKKKKERQNL*IAHVVAPAKEE 495
Query: 231 QFTTYLSEREGGLSQRAFT*DQAS*LWEPWNPQCSVNLGPSTTFLYGRMKGHRALEVGMT 52
Q+TTYLSEREGGL QRAF *DQ S*L E W+ C VNL PS+ FLYGRMKGH+ E GM+
Sbjct: 494 QYTTYLSEREGGLRQRAFI*DQIS*L*ELWSLPCMVNLDPSSMFLYGRMKGHQVFEAGMS 315
Query: 51 *NYTEFTQ 28
* T+FTQ
Sbjct: 314 *RCTKFTQ 291
Score = 181 bits (389), Expect = 8e-045
Identities = 87/139 (62%), Positives = 104/139 (74%)
Frame = -3 / -2
Query: 437 YCFKP*CLQSIFEVEV*WSIRFFQSSY*HGSGSFILSSLYTYCYQDPFKGGKDSKIYKSS 258
YC + *C SIFEVEV WSI FFQ +Y*HGSGSFILS L+TY Y+D K K++KIY+S
Sbjct: 700 YCIES*CF*SIFEVEVRWSI*FFQGTY*HGSGSFILSPLHTYRYEDSRKRRKNAKIYESL 521
Query: 257 L*LFHQKGNNLPLIYPRERAV*VREHLHEIRPVNSGSLGIRSAR*I*VPQPRSCMEG*KA 78
+*L QK N++PLI RERAV* REHL +IR VN S G+ A *I*+PQ SCMEG*KA
Sbjct: 520 M*LLQQKRNSIPLICQRERAV*DREHLSKIRSVNFRSFGVCRAW*I*IPQACSCMEG*KA 341
Query: 77 TEH*RWG*PEIIQNLPSRS 21
++ R G* E +QNLP+RS
Sbjct: 340 IKYSRRG*VEGVQNLPNRS 284
Score = 173 bits (372), Expect = 2e-042
Identities = 86/139 (61%), Positives = 97/139 (69%)
Frame = +1 / +3
Query: 22 DRLGKFCIISGHPHL*CSVAFHPSIQERG*GT*IYRALRIPRLPELTGLISCKCSLT*TA 201
D LGKFC S HP L +AFHPSIQE *G *IY A + P+L +LT LI KCSL+*TA
Sbjct: 285 DLLGKFCTPSTHPRLEYLMAFHPSIQEHA*GI*IYHARQTPKLLKLTDLILDKCSLS*TA 464
Query: 202 LSLG*ISGKLFPFWWNSYKDDL*ILESFPPLNGSW*QYVYKDDKMNEPLPCQ*EL*KNRM 381
LSL ISG LF F W++Y D *IL F S *+YV K D+MNEPLPCQ* *KN+M
Sbjct: 465 LSL*QISGILFLFCWSNYMSDS*ILAFFLLFRESS*RYVCKGDRMNEPLPCQ*VP*KNQM 644
Query: 382 DHHTSTSKID*RHQGLKQY 438
DH TSTSKID*+HQ QY
Sbjct: 645 DHRTSTSKID*KHQDSMQY 701
>gb|CD907374.1|CD907374 G468.106L19R010929 G468 Triticum aestivum cDNA clone G468106L19,
mRNA sequence
Length = 769
Score = 255 bits (551), Expect(3) = 2e-075
Identities = 101/123 (82%), Positives = 113/123 (91%)
Frame = -1 / -3
Query: 370 FKALIDMAAVHSSCRLCIHIATKIHLKEERTPKFTNRPCSCSTKKGTIYHLFIRERGRFK 191
F+ DMAAVHSSCRLCIHIATKIH KEERTPKF NR CSCS+K+GT+YHLF+RERGRFK
Sbjct: 641 FQGTYDMAAVHSSCRLCIHIATKIHEKEERTPKFMNRSCSCSSKRGTVYHLFVRERGRFK 462
Query: 190 SESIYMRSGQLTLGALESAVLGKFRSLNHVPVWKDERPPSIRGGDDLKLYRIYPVGLTQR 11
+ESIY+RS QLTLGALESAV GKFRSL HVPVWKDERP SIRGGD+LK+Y+IYP+GLT+R
Sbjct: 461 TESIYLRSDQLTLGALESAVHGKFRSLKHVPVWKDERPSSIRGGDELKVYKIYPIGLTER 282
Query: 10 QAL 2
QAL
Sbjct: 281 QAL 273
Score = 167 bits (360), Expect(2) = 4e-047
Identities = 78/113 (69%), Positives = 82/113 (72%)
Frame = +3 / +1
Query: 18 VRPTG*ILYNFRXXXXXXXXXXXXFHTGTWLRDLNLPSTADSKAPRVNWPDLM*MLSDLN 197
VRP G*ILY F FHTGT LRDLNLP TADSKAP+VN DL *MLS LN
Sbjct: 289 VRPIG*ILYTFNSSPPRILDGLSSFHTGTCLRDLNLPCTADSKAPKVN*SDLR*MLSVLN 468
Query: 198 RPLSRINKW*IVPFLVEQLQGRFVNFGVLSSFKWILVAICIQRRQDE*TAAMS 356
RPLS NKW VP L+EQL RF+NFGVLSSF I VAIC+QRRQDE*TAAMS
Sbjct: 469 RPLSLTNKWYTVPLLLEQLHERFINFGVLSSFS*IFVAICMQRRQDE*TAAMS 627
Score = 157 bits (338), Expect(3) = 1e-042
Identities = 71/113 (62%), Positives = 80/113 (70%)
Frame = -2 / -1
Query: 366 KLLLTWQRFIHLVVFVYILLPRSI*RRKGLQNLQIVLVAVPPKREQFTTYLSEREGGLSQ 187
K L+TWQRFIH V F YI L R ++K QNL I V P K EQ+TTYLSEREGGL Q
Sbjct: 637 KALMTWQRFIHPVAFAYISLRRFTKKKKERQNL*IAHVVAPAKEEQYTTYLSEREGGLRQ 458
Query: 186 RAFT*DQAS*LWEPWNPQCSVNLGPSTTFLYGRMKGHRALEVGMT*NYTEFTQ 28
RAF *DQ S*L E W+ C VNL PS+ FLYGRMKGH+ E GM+* T+FTQ
Sbjct: 457 RAFI*DQIS*L*ELWSLPCMVNLDPSSMFLYGRMKGHQVFEAGMS*RCTKFTQ 299
Score = 151 bits (324), Expect(2) = 5e-041
Identities = 70/111 (63%), Positives = 77/111 (69%)
Frame = +2 / +3
Query: 23 TDWVNSV*FQVIPTSNARWPFILPYRNVVEGPKFTEHCGFQGSQS*LA*SHVNAL*LKPP 202
T WVN V Q+IP SN WPFILPYRN++EG KFT H Q S S*L *S +NAL LKPP
Sbjct: 294 TYWVNFVHLQLIPASNT*WPFILPYRNMLEGSKFTMHGRLQSS*S*LI*S*INALCLKPP 473
Query: 203 SLSDK*VVNCSLFGGTATRTICKFWSPFLL*MDLGSNMYTKTTR*MNRCHV 355
SLSDK*VV CS F G T I KFW F ++L S+MY K T *MNRCHV
Sbjct: 474 SLSDK*VVYCSSFAGATT*AIHKFWRSFFFFVNLRSDMYAKATG*MNRCHV 626
Score = 139 bits (299), Expect(2) = 7e-035
Identities = 69/112 (61%), Positives = 84/112 (75%)
Frame = -3 / -2
Query: 356 *HGSGSFILSSLYTYCYQDPFKGGKDSKIYKSSL*LFHQKGNNLPLIYPRERAV*VREHL 177
*HGSGSFILS L+TY Y+D K K++KIY+S +*L QK N++PLI RERAV* REHL
Sbjct: 627 *HGSGSFILSPLHTYRYEDSRKRRKNAKIYESLM*LLQQKRNSIPLICQRERAV*DREHL 448
Query: 176 HEIRPVNSGSLGIRSAR*I*VPQPRSCMEG*KATEH*RWG*PEIIQNLPSRS 21
+IR VN S G+ A *I*+PQ SCMEG*KA ++ R G* E +QNLP+RS
Sbjct: 447 SKIRSVNFRSFGVCRAW*I*IPQACSCMEG*KAIKYSRRG*VEGVQNLPNRS 292
Score = 132 bits (282), Expect(2) = 4e-033
Identities = 66/111 (59%), Positives = 75/111 (67%)
Frame = +1 / +2
Query: 22 DRLGKFCIISGHPHL*CSVAFHPSIQERG*GT*IYRALRIPRLPELTGLISCKCSLT*TA 201
D LGKFC S HP L +AFHPSIQE *G *IY A + P+L +LT LI KCSL+*TA
Sbjct: 293 DLLGKFCTPSTHPRLEYLMAFHPSIQEHA*GI*IYHARQTPKLLKLTDLILDKCSLS*TA 472
Query: 202 LSLG*ISGKLFPFWWNSYKDDL*ILESFPPLNGSW*QYVYKDDKMNEPLPC 354
LSL ISG LF F W++Y D *IL F S *+YV K D+MNEPLPC
Sbjct: 473 LSL*QISGILFLFCWSNYMSDS*ILAFFLLFRESS*RYVCKGDRMNEPLPC 625
Score = 44.1 bits (90), Expect(3) = 2e-075
Identities = 19/28 (67%), Positives = 20/28 (71%)
Frame = -1 / -1
Query: 439 NIASNPDAFNQSLRWKYDGPSDSFKALI 356
NI F SLRWKYDGPSDSFKAL+
Sbjct: 709 NICIES*CF**SLRWKYDGPSDSFKALM 626
Score = 41.4 bits (84), Expect(2) = 4e-047
Identities = 16/17 (94%), Positives = 16/17 (94%)
Frame = +3 / +3
Query: 357 IRALKESDGPSYFHLKD 407
I ALKESDGPSYFHLKD
Sbjct: 627 ISALKESDGPSYFHLKD 677
Score = 37.3 bits (75), Expect(2) = 5e-041
Identities = 13/20 (65%), Positives = 17/20 (85%)
Frame = +2 / +2
Query: 356 NKSFERIGWTIILPPQRLIE 415
+K ERI WTI+LPPQRL++
Sbjct: 626 HKCLERIRWTIVLPPQRLLK 685
Score = 32.2 bits (64), Expect(3) = 1e-042
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = -3 / -3
Query: 407 IFEVEV*WSIRFFQSSY 357
IFEVEV WSI FFQ +Y
Sbjct: 677 IFEVEVRWSI*FFQGTY 627
Score = 29.9 bits (59), Expect(2) = 4e-033
Identities = 12/14 (85%), Positives = 13/14 (92%)
Frame = +1 / +1
Query: 367 *KNRMDHHTSTSKI 408
*KN+MDH TSTSKI
Sbjct: 637 *KNQMDHRTSTSKI 678
Score = 28.1 bits (55), Expect(2) = 7e-035
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = -2 / -2
Query: 408 NL*GGSMMVHPILSKLL 358
NL*GGS MVH ILS+ L
Sbjct: 678 NL*GGSTMVHLILSRHL 628
Score = 23.1 bits (44), Expect(3) = 2e-075
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = -3 / -2
Query: 461 FSC*DNEKYCFKP 423
F C*DNE Y P
Sbjct: 729 FQC*DNETYASNP 691
Score = 22.6 bits (43), Expect(3) = 1e-042
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = -1 / -2
Query: 433 ASNPDAFN 410
ASNPDAFN
Sbjct: 702 ASNPDAFN 679
>gb|CD907433.1|CD907433 G468.106O06F010813 G468 Triticum aestivum cDNA clone G468106O06,
mRNA sequence
Length = 653
Score = 223 bits (482), Expect = 1e-057
Identities = 89/103 (86%), Positives = 95/103 (92%)
Frame = -1 / +3
Query: 400 RWKYDGPSDSFKALIDMAAVHSSCRLCIHIATKIHLKEERTPKFTNRPCSCSTKKGTIYH 221
RWKYDGPSDSFKALIDMAAVHSSCRLCIHIATKIH KEERTPKF NR CSCS+K+GT+YH
Sbjct: 345 RWKYDGPSDSFKALIDMAAVHSSCRLCIHIATKIHEKEERTPKFMNRSCSCSSKRGTVYH 524
Query: 220 LFIRERGRFKSESIYMRSGQLTLGALESAVLGKFRSLNHVPVW 92
LF+RERGRFK+ESIY+RS QLTLGA ESA GKFRSL HVPVW
Sbjct: 525 LFVRERGRFKTESIYLRSDQLTLGAWESAGHGKFRSLKHVPVW 653
Score = 179 bits (385), Expect = 3e-044
Identities = 80/104 (76%), Positives = 86/104 (82%)
Frame = +3 / -2
Query: 93 HTGTWLRDLNLPSTADSKAPRVNWPDLM*MLSDLNRPLSRINKW*IVPFLVEQLQGRFVN 272
HTGT LRDLNLP ADS+AP+VN DL *MLS LNRPLS NKW VP L+EQL RF+N
Sbjct: 652 HTGTCLRDLNLPCPADSQAPKVN*SDLR*MLSVLNRPLSLTNKWYTVPLLLEQLHERFIN 473
Query: 273 FGVLSSFKWILVAICIQRRQDE*TAAMSIRALKESDGPSYFHLK 404
FGVLSSF I VAIC+QRRQDE*TAAMSI ALKESDGPSYFHL+
Sbjct: 472 FGVLSSFS*IFVAICMQRRQDE*TAAMSISALKESDGPSYFHLQ 341
Score = 138 bits (295), Expect = 8e-032
Identities = 64/103 (62%), Positives = 71/103 (68%)
Frame = +2 / -1
Query: 92 PYRNVVEGPKFTEHCGFQGSQS*LA*SHVNAL*LKPPSLSDK*VVNCSLFGGTATRTICK 271
PYRN++EG KFT S S*L *S +NAL LKPPSLSDK*VV CS F G T I K
Sbjct: 653 PYRNMLEGSKFTMPGRLPSS*S*LI*S*INALCLKPPSLSDK*VVYCSSFAGATT*AIHK 474
Query: 272 FWSPFLL*MDLGSNMYTKTTR*MNRCHVNKSFERIGWTIILPP 400
FW F ++L S+MY K T *MNRCHVNK ERI WTI+LPP
Sbjct: 473 FWRSFFFFVNLRSDMYAKATG*MNRCHVNKCLERIRWTIVLPP 345
Score = 135 bits (290), Expect = 4e-031
Identities = 65/102 (63%), Positives = 77/102 (75%)
Frame = -3 / +2
Query: 398 VEV*WSIRFFQSSY*HGSGSFILSSLYTYCYQDPFKGGKDSKIYKSSL*LFHQKGNNLPL 219
VEV WSI FFQ +Y*HGSGSFILS L+TY Y+D K K++KIY+S +*L QK N++PL
Sbjct: 347 VEVRWSI*FFQGTY*HGSGSFILSPLHTYRYEDSRKRRKNAKIYESLM*LLQQKRNSIPL 526
Query: 218 IYPRERAV*VREHLHEIRPVNSGSLGIRSAR*I*VPQPRSCM 93
I RERAV* REHL +IR VN SLG+ A *I*+PQ SCM
Sbjct: 527 ICQRERAV*DREHLSKIRSVNFRSLGVCRAW*I*IPQACSCM 652
Score = 129 bits (277), Expect = 2e-029
Identities = 64/102 (62%), Positives = 70/102 (68%)
Frame = -2 / +1
Query: 399 GGSMMVHPILSKLLLTWQRFIHLVVFVYILLPRSI*RRKGLQNLQIVLVAVPPKREQFTT 220
GGS MVH ILS+ LLTWQRFIH V F YI L R ++K QNL I V P K EQ+TT
Sbjct: 346 GGSTMVHLILSRHLLTWQRFIHPVAFAYISLRRFTKKKKERQNL*IAHVVAPAKEEQYTT 525
Query: 219 YLSEREGGLSQRAFT*DQAS*LWEPWNPQCSVNLGPSTTFLY 94
YLSEREGGL QRAF *DQ S*L E + VNL PS+ FLY
Sbjct: 526 YLSEREGGLRQRAFI*DQIS*L*ELGSLPGMVNLDPSSMFLY 651
Score = 120 bits (256), Expect = 2e-026
Identities = 62/102 (60%), Positives = 71/102 (69%)
Frame = +1 / -3
Query: 94 IQERG*GT*IYRALRIPRLPELTGLISCKCSLT*TALSLG*ISGKLFPFWWNSYKDDL*I 273
IQE *G *IY A + P+L +LT LI KCSL+*TALSL ISG LF F W++Y D *I
Sbjct: 651 IQEHA*GI*IYHARQTPKLLKLTDLILDKCSLS*TALSL*QISGILFLFCWSNYMSDS*I 472
Query: 274 LESFPPLNGSW*QYVYKDDKMNEPLPCQ*EL*KNRMDHHTST 399
L F S *+YV K D+MNEPLPCQ* *KN+MDH TST
Sbjct: 471 LAFFLLFRESS*RYVCKGDRMNEPLPCQ*VP*KNQMDHRTST 346
>gb|CA661821.1|CA661821 wlmk1.pk0008.b8 wlmk1 Triticum aestivum cDNA clone wlmk1.pk0008.b8
5' end, mRNA sequence
Length = 600
Score = 206 bits (445), Expect(2) = 5e-056
Identities = 88/107 (82%), Positives = 91/107 (85%)
Frame = -1 / +1
Query: 523 IQEFXPGEGAILHIXXLDDVASVAKTMKNIASNPDAFNQSLRWKYDGPSDSFKALIDMAA 344
IQEF PGEGAILHI LDDV SVAKTMK+IASNPDAFNQSLRWKYDGPSDSFKALIDMAA
Sbjct: 1 IQEFSPGEGAILHIKELDDVISVAKTMKHIASNPDAFNQSLRWKYDGPSDSFKALIDMAA 180
Query: 343 VHSSCRLCIHIATKIHLKEERTPKFTNRPCSCSTKKGTIYHLFIRER 203
VHSSCRLCIHIATK H KEE+TPK NR CSCS +K T L RER
Sbjct: 181 VHSSCRLCIHIATKDHEKEEKTPKLMNRSCSCSKQKRTYTLLSRRER 321
Score = 174 bits (375), Expect(2) = 1e-047
Identities = 81/106 (76%), Positives = 87/106 (82%)
Frame = +3 / -2
Query: 204 LSRINKW*IVPFLVEQLQGRFVNFGVLSSFKWILVAICIQRRQDE*TAAMSIRALKESDG 383
LS ++ V F +EQL RF+NFGV SSF VAIC+QRRQDE*TAAMSI ALKESDG
Sbjct: 320 LSLLDNSVYVLFCLEQLHERFINFGVFSSFS*SFVAICMQRRQDE*TAAMSISALKESDG 141
Query: 384 PSYFHLKD*LKASGFEAIFFIVLATEATSSSXLICNIAPSPGXNS* 521
PSYFHLKD*LKASGF+AI FIVLATE TSSS LICNIAPSPG NS*
Sbjct: 140 PSYFHLKD*LKASGFDAICFIVLATEMTSSSSLICNIAPSPGENS* 3
Score = 142 bits (304), Expect(2) = 4e-035
Identities = 64/98 (65%), Positives = 70/98 (71%)
Frame = +2 / -1
Query: 230 CSLFGGTATRTICKFWSPFLL*MDLGSNMYTKTTR*MNRCHVNKSFERIGWTIILPPQRL 409
CSL GT T I W F M S+MY K T *MNRCHVNK ERI WTIILPPQRL
Sbjct: 294 CSLLLGTTT*AIH*LWCFFFFFMIFRSDMYAKATG*MNRCHVNKCLERIRWTIILPPQRL 115
Query: 410 IEGIRV*SNIFHCLSN*SNIIKLXNM*YCAFSRXKLLN 523
I+ IR+* N+FHCLSN*++IIKL NM*YC FS KLLN
Sbjct: 114 IKSIRI*CNMFHCLSN*NDIIKLLNM*YCTFSWRKLLN 1
Score = 139 bits (299), Expect(2) = 2e-033
Identities = 67/106 (63%), Positives = 77/106 (72%)
Frame = -3 / +3
Query: 521 SRVXSGRRRNITY*XA**CCFSC*DNEKYCFKP*CLQSIFEVEV*WSIRFFQSSY*HGSG 342
SRV S RR NITY* A**C FSC*DNE YC K *C SIFEVEV*WSI FFQ +Y*HGSG
Sbjct: 3 SRVFSRRRCNITY*GA**CHFSC*DNETYCIKS*CF*SIFEVEV*WSI*FFQGTY*HGSG 182
Query: 341 SFILSSLYTYCYQDPFKGGKDSKIYKSSL*LFHQKGNNLPLIYPRE 204
SFILS L+TY Y+ K K++K+ +S +*LF K N ++ RE
Sbjct: 183 SFILSPLHTYRYERS*KRRKNTKVNESLM*LFQAKENIYTIVQKRE 320
Score = 133 bits (286), Expect(2) = 3e-032
Identities = 64/98 (65%), Positives = 71/98 (72%)
Frame = +1 / -3
Query: 229 LFPFWWNSYKDDL*ILESFPPLNGSW*QYVYKDDKMNEPLPCQ*EL*KNRMDHHTSTSKI 408
+F F WN+Y D L F + *+YV K D+MNEPLPCQ* *KN+MDHHTSTSKI
Sbjct: 295 MFSFAWNNYMSDSLTLVFFLLFHDLS*RYVCKGDRMNEPLPCQ*VP*KNQMDHHTSTSKI 116
Query: 409 D*RHQGLKQYFSLS*QLKQHHQAX*YVILRLLPEXTLE 522
D*+HQ L QY SLS*QLK HHQA *YVIL LL E TLE
Sbjct: 115 D*KHQDLMQYVSLS*QLK*HHQAP*YVILHLLLEKTLE 2
Score = 36.3 bits (73), Expect(2) = 1e-047
Identities = 15/23 (65%), Positives = 16/23 (69%)
Frame = +3 / -2
Query: 90 FHTGTWLRDLNLPSTADSKAPRV 158
FHTGT LR LN P TAD K +V
Sbjct: 428 FHTGTCLRXLNXPCTADPKVLKV 360
Score = 32.2 bits (64), Expect(2) = 5e-056
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = -2 / +2
Query: 144 WNPQCSVNLGPSTTFLYGRMK 82
W+ C NL PS FLYGR K
Sbjct: 374 WDLPCMGNLXPSNMFLYGRXK 436
Score = 26.7 bits (52), Expect(2) = 4e-035
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = +2 / -1
Query: 83 FILPYRNVVEGPKFTEH 133
F LPYRN+ EG K H
Sbjct: 435 FXLPYRNMFEGXKXPMH 385
Score = 25.4 bits (49), Expect(2) = 3e-032
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = +1 / -3
Query: 88 PSIQERG*GT*IYRALRIPR 147
PSIQE *G *I A +IP+
Sbjct: 430 PSIQEHV*GX*IXHARQIPK 371
Score = 23.1 bits (44), Expect(2) = 2e-033
Identities = 12/19 (63%), Positives = 12/19 (63%)
Frame = -3 / +3
Query: 143 GIRSAR*I*VPQPRSCMEG 87
GI A I* PQ SCMEG
Sbjct: 375 GICRAWXI*XPQTCSCMEG 431
>gb|CA602908.1|CA602908 wr1.pk0007.e11 wr1 Triticum aestivum cDNA clone wr1.pk0007.e11 5'
end, mRNA sequence
Length = 487
Score = 204 bits (441), Expect = 6e-052
Identities = 80/97 (82%), Positives = 91/97 (93%)
Frame = -1 / +1
Query: 292 KEERTPKFTNRPCSCSTKKGTIYHLFIRERGRFKSESIYMRSGQLTLGALESAVLGKFRS 113
KEERTPKF NR CSCS+K+GT+YHLF+RERGRFK+ESIY+RS QLTLGALESAV GKFRS
Sbjct: 1 KEERTPKFMNRSCSCSSKRGTVYHLFVRERGRFKTESIYLRSDQLTLGALESAVHGKFRS 180
Query: 112 LNHVPVWKDERPPSIRGGDDLKLYRIYPVGLTQRQAL 2
L HVPVWKDERP SIRGGD+LK+Y+IYP+GLT+RQAL
Sbjct: 181 LKHVPVWKDERPSSIRGGDELKVYKIYPIGLTERQAL 291
Score = 130 bits (278), Expect = 2e-029
Identities = 60/91 (65%), Positives = 63/91 (69%)
Frame = +3 / -3
Query: 18 VRPTG*ILYNFRXXXXXXXXXXXXFHTGTWLRDLNLPSTADSKAPRVNWPDLM*MLSDLN 197
VRP G*ILY F FHTGT LRDLNLP TADSKAP+VN DL *MLS LN
Sbjct: 275 VRPIG*ILYTFNSSPPRILDGLSSFHTGTCLRDLNLPCTADSKAPKVN*SDLR*MLSVLN 96
Query: 198 RPLSRINKW*IVPFLVEQLQGRFVNFGVLSS 290
RPLS NKW VP L+EQL RF+NFGVLSS
Sbjct: 95 RPLSLTNKWYTVPLLLEQLHERFINFGVLSS 3
Score = 125 bits (268), Expect = 4e-028
Identities = 56/88 (63%), Positives = 64/88 (72%)
Frame = -2 / +2
Query: 291 RRKGLQNLQIVLVAVPPKREQFTTYLSEREGGLSQRAFT*DQAS*LWEPWNPQCSVNLGP 112
++K QNL I V P K EQ+TTYLSEREGGL QRAF *DQ S*L E W+ C VNL P
Sbjct: 2 KKKERQNL*IAHVVAPAKEEQYTTYLSEREGGLRQRAFI*DQIS*L*ELWSLPCMVNLDP 181
Query: 111 STTFLYGRMKGHRALEVGMT*NYTEFTQ 28
S+ FLYGRMKGH+ E GM+* T+FTQ
Sbjct: 182 SSMFLYGRMKGHQVFEAGMS*RCTKFTQ 265
Score = 122 bits (261), Expect = 4e-027
Identities = 57/88 (64%), Positives = 61/88 (69%)
Frame = +2 / -2
Query: 23 TDWVNSV*FQVIPTSNARWPFILPYRNVVEGPKFTEHCGFQGSQS*LA*SHVNAL*LKPP 202
T WVN V Q+IP SN WPFILPYRN++EG KFT H Q S S*L *S +NAL LKPP
Sbjct: 270 TYWVNFVHLQLIPASNT*WPFILPYRNMLEGSKFTMHGRLQSS*S*LI*S*INALCLKPP 91
Query: 203 SLSDK*VVNCSLFGGTATRTICKFWSPF 286
SLSDK*VV CS F G T I KFW F
Sbjct: 90 SLSDK*VVYCSSFAGATT*AIHKFWRSF 7
Score = 106 bits (226), Expect = 3e-022
Identities = 53/88 (60%), Positives = 66/88 (75%)
Frame = -3 / +3
Query: 284 KDSKIYKSSL*LFHQKGNNLPLIYPRERAV*VREHLHEIRPVNSGSLGIRSAR*I*VPQP 105
K++KIY+S +*L QK N++PLI RERAV* REHL +IR VN S G+ A *I*+PQ
Sbjct: 9 KNAKIYESLM*LLQQKRNSIPLICQRERAV*DREHLSKIRSVNFRSFGVCRAW*I*IPQA 188
Query: 104 RSCMEG*KATEH*RWG*PEIIQNLPSRS 21
SCMEG*KA ++ R G* E +QNLP+RS
Sbjct: 189 CSCMEG*KAIKYSRRG*VEGVQNLPNRS 272
Score = 105 bits (223), Expect = 7e-022
Identities = 53/88 (60%), Positives = 60/88 (68%)
Frame = +1 / -1
Query: 22 DRLGKFCIISGHPHL*CSVAFHPSIQERG*GT*IYRALRIPRLPELTGLISCKCSLT*TA 201
D LGKFC S HP L +AFHPSIQE *G *IY A + P+L +LT LI KCSL+*TA
Sbjct: 271 DLLGKFCTPSTHPRLEYLMAFHPSIQEHA*GI*IYHARQTPKLLKLTDLILDKCSLS*TA 92
Query: 202 LSLG*ISGKLFPFWWNSYKDDL*ILESF 285
LSL ISG LF F W++Y D *IL F
Sbjct: 91 LSL*QISGILFLFCWSNYMSDS*ILAFF 8
>gb|CA502151.1|CA502151 WHE4043_D07_H13ZT Wheat meiotic anther cDNA library Triticum
aestivum cDNA clone WHE4043_D07_H13, mRNA sequence
Length = 534
Score = 132 bits (282), Expect = 5e-030
Identities = 54/66 (81%), Positives = 61/66 (92%)
Frame = -1 / +1
Query: 199 RFKSESIYMRSGQLTLGALESAVLGKFRSLNHVPVWKDERPPSIRGGDDLKLYRIYPVGL 20
R K+ESIY+RS QLTLGALESAV GKFRSL HVPVWKDERP SIRGGD+LK+Y+IYP+GL
Sbjct: 31 RPKTESIYLRSDQLTLGALESAVHGKFRSLKHVPVWKDERPSSIRGGDELKVYKIYPIGL 210
Query: 19 TQRQAL 2
T+RQAL
Sbjct: 211 TERQAL 228
>gb|BG263065.1|BG263065 WHE0946_F09_K18ZS Wheat 5-15 DAP spike cDNA library Triticum
aestivum cDNA clone WHE0946_F09_K18, mRNA sequence
Length = 321
Score = 102 bits (217), Expect = 4e-021
Identities = 42/58 (72%), Positives = 44/58 (75%)
Frame = -1 / +2
Query: 637 RYRFSXXFEXXXEXDYXXEKFFQXXVXGSIPVVVGAPNIQEFXPGEGAILHIXXLDDV 464
RY+FS FE E DY EKFFQ V G+IPVVVGAPNIQEF PGEGAILHI LDDV
Sbjct: 146 RYKFSLAFENSGEEDYVTEKFFQSLVTGAIPVVVGAPNIQEFSPGEGAILHIKELDDV 319
Database: Triticum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 3:01 PM
Number of letters in database: 367,240,239
Number of sequences in database: 636,343
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 541,131,476
Number of Sequences: 636343
Number of extensions: 7546499
Number of successful extensions: 63855
Number of sequences better than 1.0e-020: 10
length of database: 122,413,413
effective HSP length: 53
effective length of database: 88,687,234
effective search space used: 14012582972
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)