TBLASTX 2.2.10 [Oct-19-2004]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= QBTB.006E19F020311.3.1
         (789 letters)

Database: Triticum_nucl_with_EST.fasta 
           636,343 sequences; 367,240,239 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AJ888641.1|AJ888641  AJ888641 Triticum aestivum cv. Fidel...   166   3e-040

>gb|AJ888641.1|AJ888641 AJ888641 Triticum aestivum cv. Fidel leaf Triticum aestivum cDNA
           clone OA_a3D11, mRNA sequence
          Length = 521

 Score =  166 bits (357), Expect = 3e-040
 Identities = 67/102 (65%), Positives = 79/102 (77%)
 Frame = +2 / -1

                                                                       
Query: 482 MLTYLVYEKQQKLRIMMKMHGLKDGPYWLISYSYFLALSIVYMLFFMIFGSLIGLNFFRV 661
           +LTYLVYEKQQKL+IMMKMHGLKDGPYW+I+Y+YF ALS VYML F+IFGS+IGL FF  
Sbjct: 521 VLTYLVYEKQQKLKIMMKMHGLKDGPYWMITYTYFFALSAVYMLLFIIFGSVIGLRFFTA 342

                                                     
Query: 662 NEYSIQAVFFFVCINLQIXXXXXXXXXXXXGKMATGMGYMYV 787
           N YSIQ VF+F+ INLQI             K+AT +GY+YV
Sbjct: 341 NNYSIQIVFYFIYINLQIALAFFAASFFSSVKIATVVGYIYV 216




 Score =  125 bits (267), Expect = 7e-028
 Identities = 54/100 (54%), Positives = 69/100 (69%)
 Frame = -3 / +3

                                                                       
Query: 787 YIHVPHPCGHLARQKERCHKKCKCNLQIYTDEEKNSLYAIFIYSEKIETNQGAKNHKE*H 608
           YI+V + CG    +KER  +KC+CNLQIY DE +N+L A+ I  E+ +T  GAKN K *H
Sbjct: 216 YINVTNHCGDFD*RKERRCEKCECNLQIYVDEVENNLNAVIICCEEAQTYHGAKNDK**H 395

                                                   
Query: 607 IDD**SKEIRIRYQPVRPILQTVHFHHNPXXXXXLIHQIC 488
           ID **SKE+ + Y PVR +LQT+H HHN      LIH+IC
Sbjct: 396 IDS**SKEVSVSYHPVRAVLQTMHLHHNFQLLLFLIHEIC 515




 Score =  109 bits (232), Expect = 5e-023
 Identities = 50/101 (49%), Positives = 64/101 (63%)
 Frame = +1 / -3

                                                                       
Query: 487 DISGV*EAAEAKDYDENARSEGWALLADILFLFPCSINRLYVILYDFWLLDWSQFFQSK* 666
           +IS V*E  +A++YDE+A  EG  LL D L L  CSI+ LY  +Y FWL D S    SK*
Sbjct: 516 NISRV*ETTKAENYDEDAWFEGRPLLDDNLHLLLCSISCLYATIYHFWLRDRSALLHSK* 337

                                                    
Query: 667 I*HTSCFFLRLYKFADCTCIFCGIFLFVWQDGHRDGVHVCI 789
           + H+ CF L L+K ADCT IF  + LF  Q+ H   +H+CI
Sbjct: 336 LQHSDCFLLHLHKSADCTRIFRSVVLFFSQNRHSGWLHLCI 214



  Database: Triticum_nucl_with_EST.fasta
    Posted date:  Feb 7, 2006  3:01 PM
  Number of letters in database: 367,240,239
  Number of sequences in database:  636,343
  
Lambda     K      H
   0.318    0.134    0.401 


Matrix: BLOSUM62
Number of Hits to DB: 735,560,531
Number of Sequences: 636343
Number of extensions: 10237415
Number of successful extensions: 66022
Number of sequences better than 1.0e-020: 1
length of database: 122,413,413
effective HSP length: 53
effective length of database: 88,687,234
effective search space used: 18535631906
frameshift window, decay const: 40,  0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)