TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= QAT2e04.yg.2.1
(424 letters)
Database: Triticum_nucl_with_EST.fasta
636,343 sequences; 367,240,239 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BU100200.1|BU100200 WHE3316_D08_H16ZS Chinese Spring whe... 245 1e-066
gb|BJ249054.1|BJ249054 BJ249054 Y. Ogihara unpublished cDNA... 246 9e-065
gb|AJ612129.1|AJ612129 AJ612129 Triticum turgidum subsp. du... 242 2e-063
gb|BJ314578.1|BJ314578 BJ314578 Y. Ogihara unpublished cDNA... 135 4e-056
gb|CN008830.1|CN008830 WHE2645_F07_K13ZE Wheat Fusarium gra... 135 6e-055
gb|CK209599.1|CK209599 FGAS021371 Triticum aestivum FGAS: L... 171 2e-047
gb|AL825824.1|AL825824 AL825824 p:234 Triticum aestivum cDN... 136 2e-044
gb|BJ320066.1|BJ320066 BJ320066 Y. Ogihara unpublished cDNA... 135 1e-040
gb|AL830360.1|AL830360 AL830360 q:343 Triticum aestivum cDN... 139 1e-036
gb|CN012258.1|CN012258 WHE3894_E09_J18ZS Wheat Fusarium gra... 74 1e-035
gb|CA610463.1|CA610463 wr1.pk0119.e12 wr1 Triticum aestivum... 135 3e-031
gb|BE429913.1|BE429913 TAS005.B02R990622 ITEC TAS Wheat cDN... 85 3e-030
gb|BJ260192.1|BJ260192 BJ260192 Y. Ogihara unpublished cDNA... 122 3e-027
>gb|BU100200.1|BU100200 WHE3316_D08_H16ZS Chinese Spring wheat drought stressed root cDNA
library Triticum aestivum cDNA clone WHE3316_D08_H16,
mRNA sequence
Length = 682
Score = 245 bits (530), Expect(2) = 1e-066
Identities = 103/112 (91%), Positives = 107/112 (95%)
Frame = +3 / +3
Query: 3 ATALPKAHPSFSLQQVLEMSERWKARTVPEEPIHLFIGILSATNHFAERMAIRKTWMQFP 182
AT+LPKAHPSFSLQ VLEMS++WKAR VPEEPI LFIGILSATNHFAERMAIRKTWMQFP
Sbjct: 312 ATSLPKAHPSFSLQNVLEMSDKWKARPVPEEPIQLFIGILSATNHFAERMAIRKTWMQFP 491
Query: 183 AIQSGNAVARFFVALSHRKEINAALKKEAEYFGDIVILPFIDRYELVVLKTV 338
AIQ GN VARFFVALSHRKEINAALKKEAEYFGD+VILPFIDRYELVVLKTV
Sbjct: 492 AIQLGNVVARFFVALSHRKEINAALKKEAEYFGDVVILPFIDRYELVVLKTV 647
Score = 186 bits (401), Expect(2) = 9e-049
Identities = 81/112 (72%), Positives = 86/112 (76%)
Frame = -1 / -1
Query: 337 TVFRTTSSYRSMNGRMTMSPKYXXXXXXXXXXXXXXXXATKNRATAFPDWIAGNCIQVFL 158
TV RTT+SYRS+NGRMT SPKY ATKNRAT FP+WIAGNCIQVFL
Sbjct: 646 TVLRTTNSYRSINGRMTTSPKYSASFFSAAFISFLWLSATKNRATTFPNWIAGNCIQVFL 467
Query: 157 IAMRSAKWFVAERMPMKRWIGSSGTVRAFHLSDISKTCWREKLGCAFGSAVA 2
IA+RSAKWFVAERMP+K IGSSGT RAFHLSDISKT REKLGCAFG VA
Sbjct: 466 IAIRSAKWFVAERMPIKS*IGSSGTGRAFHLSDISKTFCREKLGCAFGREVA 311
Score = 185 bits (398), Expect(2) = 7e-047
Identities = 76/112 (67%), Positives = 88/112 (78%)
Frame = -3 / -3
Query: 338 NRFQNH*LIPVDERQNDYVSKILCFLLQCCIYLLSVAQRNKEPSNRIPRLDSRKLHPSFP 159
N F+NH LIPVD+ QND VSKI CFLL CCIYL S+AQ +KE SN I +LD RKLHPSF
Sbjct: 647 NCFENHQLIPVDKWQNDNVSKIFCFLL*CCIYLFSMAQCDKESSNHISQLDCRKLHPSFS 468
Query: 158 NSHALGEMVCGGEDADEKMDWFLWHSASLPPFRHFQDLLERKARMCLWKRCC 3
NSH L +MVC E+AD+K++ FLWH ASLP RHFQD+L+RK RMCL KR C
Sbjct: 467 NSHPLSKMVCSRENADKKLNRFLWHRASLPLIRHFQDILQRKTRMCLRKRGC 312
Score = 173 bits (372), Expect(2) = 2e-044
Identities = 73/110 (66%), Positives = 87/110 (79%)
Frame = +2 / +2
Query: 5 NSASKGTS*LFSPASLGNV*KVEGSHCARGTNPSFHRHPLRHKPFRRAHGY*ENLDAVSG 184
N +S+GTS* FS LGNV* VEGS CARGT+ +F+RH L +KPF A GY*+NLDAVS
Sbjct: 314 NLSSEGTS*FFSAKCLGNV**VEGSPCARGTDSAFYRHSLCYKPFC*ADGY*KNLDAVSC 493
Query: 185 YPIGECGCSVLCCAEPQKGDKCSTEEGSRVFWRHSHSAVHRPV*ASGSEN 334
PIG+CGCS+LC EP K DKCST+EGSR+FWR HSA++RPV* GS+N
Sbjct: 494 NPIGKCGCSILCRTEP*KRDKCSTKEGSRIFWRRCHSAIYRPV*VGGSQN 643
Score = 151 bits (324), Expect = 4e-036
Identities = 76/118 (64%), Positives = 84/118 (71%)
Frame = -2 / -2
Query: 357 PRIDISQPFSEPLAHTGR*TAE*LCLQNTLLPSSVLHLSPFCGSAQQRTEQPHSPIG*PE 178
P + + F EP HTGR* AE* LQN LLPS VLHLS F GS +QR EQPH PIG E
Sbjct: 666 PVLTYRKLF*EPPTHTGR*MAE*QRLQNILLPSLVLHLSLFYGSVRQRIEQPHFPIGLQE 487
Query: 177 TASKFS**PCARRNGLWRRGCR*KDGLVPLAQCEPSTFQTFPRLAGEKS*DVPLEALL 4
TASKF **P A++NGL +R CR*K VPLAQ EPST+QTFPR EK+*DVP E L
Sbjct: 486 TASKFF**PSAQQNGL*QRECR*KAESVPLAQGEPSTYQTFPRHFAEKN*DVPSEERL 313
Score = 87.7 bits (185), Expect(2) = 2e-029
Identities = 39/59 (66%), Positives = 41/59 (69%)
Frame = +1 / +1
Query: 4 QQRFQRHILAFLSSKSWKCLKGGRLALCQRNQSIFSSASSPPQTISPSAWLLGKLGCSF 180
Q F+RHIL FL SWKCL GRLALCQRN+ F SA S QTI S WLL KLGCSF
Sbjct: 313 QPLFRRHILVFLCKMSWKCLISGRLALCQRNRFSFLSAFSLLQTILLSGWLLEKLGCSF 489
Score = 61.1 bits (127), Expect(2) = 2e-029
Identities = 28/43 (65%), Positives = 31/43 (72%)
Frame = +1 / +1
Query: 229 ATERR*MQH*RRKQSILET*SFCRSSTGMS*WF*KRLRYVNTG 357
A E+R*MQH*RRKQ+ILET SFC STGMS WF K+ G
Sbjct: 538 AIEKR*MQH*RRKQNILETLSFCHLSTGMSWWFSKQFAICQYG 666
Score = 27.6 bits (54), Expect(2) = 1e-066
Identities = 8/11 (72%), Positives = 11/11 (100%)
Frame = +2 / +3
Query: 338 CDMSIRGAQCH 370
CDMS+RGA+C+
Sbjct: 648 CDMSVRGAKCY 680
Score = 27.2 bits (53), Expect(2) = 9e-049
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = -1 / -3
Query: 370 VTLCTPY*HIATVF 329
VT C PY*HIA F
Sbjct: 680 VTFCPPY*HIANCF 639
Score = 25.8 bits (50), Expect(2) = 2e-044
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = +3 / +1
Query: 330 KTVAICQYGVHNVT 371
K AICQYG NVT
Sbjct: 640 KQFAICQYGGQNVT 681
Score = 22.1 bits (42), Expect(2) = 7e-047
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = -2 / -1
Query: 372 Q*HCAPRIDISQ 337
+*H APR DISQ
Sbjct: 682 R*HFAPRTDISQ 647
>gb|BJ249054.1|BJ249054 BJ249054 Y. Ogihara unpublished cDNA library, Wh_f Triticum
aestivum cDNA clone whf23d05 5', mRNA sequence
Length = 629
Score = 246 bits (532), Expect = 9e-065
Identities = 102/109 (93%), Positives = 105/109 (96%)
Frame = +3 / +1
Query: 96 PIHLFIGILSATNHFAERMAIRKTWMQFPAIQSGNAVARFFVALSHRKEINAALKKEAEY 275
PI LFIGILSATNHFAERMAIRKTWMQFPAIQ GN VARFFVALSHRKEINAALKKEAEY
Sbjct: 22 PIQLFIGILSATNHFAERMAIRKTWMQFPAIQLGNVVARFFVALSHRKEINAALKKEAEY 201
Query: 276 FGDIVILPFIDRYELVVLKTVAICQYGVHNVTADYIMKCDDDTFVRLDI 422
FGD+VILPFIDRYELVVLKTVAICQYGV NVTA+YIMKCDDDTFVRLD+
Sbjct: 202 FGDVVILPFIDRYELVVLKTVAICQYGVQNVTAEYIMKCDDDTFVRLDV 348
Score = 189 bits (408), Expect = 1e-047
Identities = 75/108 (69%), Positives = 90/108 (83%)
Frame = -3 / -3
Query: 422 YIQPHKGVIVALHDVICSDIVHPVLTYRNRFQNH*LIPVDERQNDYVSKILCFLLQCCIY 243
YIQPHKG+IVALHD++C +I+HPVLTYRN F+NH LIPVD+ QND VSKI CFLL CCIY
Sbjct: 348 YIQPHKGIIVALHDILCGNILHPVLTYRNCFENHQLIPVDKWQNDNVSKIFCFLL*CCIY 169
Query: 242 LLSVAQRNKEPSNRIPRLDSRKLHPSFPNSHALGEMVCGGEDADEKMD 99
L S+AQ +KE SN I +LD RKLHPSF NSH L +MVC E+AD+K++
Sbjct: 168 LFSMAQCDKESSNHISQLDCRKLHPSFSNSHPLSKMVCSRENADKKLN 25
Score = 183 bits (394), Expect = 1e-045
Identities = 72/110 (65%), Positives = 90/110 (81%)
Frame = +2 / +3
Query: 95 TNPSFHRHPLRHKPFRRAHGY*ENLDAVSGYPIGECGCSVLCCAEPQKGDKCSTEEGSRV 274
T+ +F+RH L +KPF A GY*+NLDAVS PIG+CGCS+LC EP K DKCST+EGSR+
Sbjct: 21 TDSAFYRHSLCYKPFC*ADGY*KNLDAVSCNPIGKCGCSILCRTEP*KRDKCSTKEGSRI 200
Query: 275 FWRHSHSAVHRPV*ASGSENGCDMSIRGAQCHCRLHHEVRR*HLCAAGYS 424
FWR HSA++RPV* GS+N CDMS+RGA+C+ R++HEVRR*+LC AG S
Sbjct: 201 FWRRCHSAIYRPV*VGGSQNSCDMSVRGAKCYRRVYHEVRR*YLCEAGCS 350
Score = 182 bits (392), Expect = 2e-045
Identities = 79/110 (71%), Positives = 85/110 (77%)
Frame = -1 / -1
Query: 424 TISSRTKVSSSHFMM*SAVTLCTPY*HIATVFRTTSSYRSMNGRMTMSPKYXXXXXXXXX 245
T SS TKVSSSHFM+ SAVT CTPY*HIATV RTT+SYRS+NGRMT SPKY
Sbjct: 350 TTSSLTKVSSSHFMIYSAVTFCTPY*HIATVLRTTNSYRSINGRMTTSPKYSASFFSAAF 171
Query: 244 XXXXXXXATKNRATAFPDWIAGNCIQVFLIAMRSAKWFVAERMPMKRWIG 95
ATKNRAT FP+WIAGNCIQVFLIA+RSAKWFVAERMP+K IG
Sbjct: 170 ISFLWLSATKNRATTFPNWIAGNCIQVFLIAIRSAKWFVAERMPIKS*IG 21
Score = 150 bits (323), Expect = 6e-036
Identities = 74/106 (69%), Positives = 81/106 (76%)
Frame = -2 / -2
Query: 423 LYPAAQRCHRRTS*CNLQ*HCAPRIDISQPFSEPLAHTGR*TAE*LCLQNTLLPSSVLHL 244
L+PA+QR HRRTS* L+*H APR DISQ F EP HTGR* AE* LQN LLPS VLHL
Sbjct: 349 LHPASQRYHRRTS*YTLR*HFAPRTDISQLF*EPPTHTGR*MAE*QRLQNILLPSLVLHL 170
Query: 243 SPFCGSAQQRTEQPHSPIG*PETASKFS**PCARRNGLWRRGCR*K 106
S F GS +QR EQPH PIG ETASKF **P A++NGL +R CR*K
Sbjct: 169 SLFYGSVRQRIEQPHFPIGLQETASKFF**PSAQQNGL*QRECR*K 32
Score = 101 bits (216), Expect(2) = 2e-026
Identities = 47/65 (72%), Positives = 52/65 (80%)
Frame = +1 / +2
Query: 229 ATERR*MQH*RRKQSILET*SFCRSSTGMS*WF*KRLRYVNTGCTMSLQITS*SATMTPL 408
A E+R*MQH*RRKQ+ILET SFC STGMS WF K+LRYV+TGC M Q S*SATM PL
Sbjct: 155 AIEKR*MQH*RRKQNILETLSFCHLSTGMSWWFSKQLRYVSTGCKMLPQSIS*SATMIPL 334
Query: 409 CGWI* 423
GW+*
Sbjct: 335 *GWM* 349
Score = 37.3 bits (75), Expect(2) = 2e-026
Identities = 18/29 (62%), Positives = 19/29 (65%)
Frame = +1 / +2
Query: 94 NQSIFSSASSPPQTISPSAWLLGKLGCSF 180
N+ F SA S QTI S WLL KLGCSF
Sbjct: 20 NRFSFLSAFSLLQTILLSGWLLEKLGCSF 106
>gb|AJ612129.1|AJ612129 AJ612129 Triticum turgidum subsp. durum etiolated seedling 20 day
Triticum turgidum subsp. durum cDNA clone 06183R, mRNA
sequence
Length = 597
Score = 242 bits (522), Expect = 2e-063
Identities = 102/118 (86%), Positives = 107/118 (90%)
Frame = +3 / +3
Query: 3 ATALPKAHPSFSLQQVLEMSERWKARTVPEEPIHLFIGILSATNHFAERMAIRKTWMQFP 182
AT+LPKAHPSFSLQ VLEMS++WKAR VPEEPI LFIGILSATNHFAERMAIRKTWMQFP
Sbjct: 204 ATSLPKAHPSFSLQNVLEMSDKWKARPVPEEPIQLFIGILSATNHFAERMAIRKTWMQFP 383
Query: 183 AIQSGNAVARFFVALSHRKEINAALKKEAEYFGDIVILPFIDRYELVVLKTVAICQYG 356
AIQ GN VARFFVALSHRKEINAALKKEAEYFGD+VILPFIDRYELVVLK + G
Sbjct: 384 AIQLGNVVARFFVALSHRKEINAALKKEAEYFGDVVILPFIDRYELVVLKQLRYVSTG 557
Score = 183 bits (395), Expect(2) = 2e-048
Identities = 75/110 (68%), Positives = 87/110 (79%)
Frame = -3 / -2
Query: 332 FQNH*LIPVDERQNDYVSKILCFLLQCCIYLLSVAQRNKEPSNRIPRLDSRKLHPSFPNS 153
F+NH LIPVD+ QND VSKI CFLL CCIYL S+AQ +KE SN I +LD RKLHPSF NS
Sbjct: 533 FENHQLIPVDKWQNDNVSKIFCFLL*CCIYLFSMAQCDKESSNHISQLDCRKLHPSFSNS 354
Query: 152 HALGEMVCGGEDADEKMDWFLWHSASLPPFRHFQDLLERKARMCLWKRCC 3
H L +MVC E+AD+K++ FLWH ASLP RHFQD+L+RK RMCL KR C
Sbjct: 353 HPLSKMVCSRENADKKLNRFLWHRASLPLIRHFQDILQRKTRMCLRKRGC 204
Score = 182 bits (392), Expect(2) = 1e-046
Identities = 79/109 (72%), Positives = 84/109 (77%)
Frame = -1 / -3
Query: 328 RTTSSYRSMNGRMTMSPKYXXXXXXXXXXXXXXXXATKNRATAFPDWIAGNCIQVFLIAM 149
RTT+SYRS+NGRMT SPKY ATKNRAT FP+WIAGNCIQVFLIA+
Sbjct: 529 RTTNSYRSINGRMTTSPKYSASFFSAAFISFLWLSATKNRATTFPNWIAGNCIQVFLIAI 350
Query: 148 RSAKWFVAERMPMKRWIGSSGTVRAFHLSDISKTCWREKLGCAFGSAVA 2
RSAKWFVAERMP+K IGSSGT RAFHLSDISKT REKLGCAFG VA
Sbjct: 349 RSAKWFVAERMPIKS*IGSSGTGRAFHLSDISKTFCREKLGCAFGREVA 203
Score = 170 bits (366), Expect(2) = 2e-043
Identities = 72/109 (66%), Positives = 86/109 (78%)
Frame = +2 / +2
Query: 5 NSASKGTS*LFSPASLGNV*KVEGSHCARGTNPSFHRHPLRHKPFRRAHGY*ENLDAVSG 184
N +S+GTS* FS LGNV* VEGS CARGT+ +F+RH L +KPF A GY*+NLDAVS
Sbjct: 206 NLSSEGTS*FFSAKCLGNV**VEGSPCARGTDSAFYRHSLCYKPFC*ADGY*KNLDAVSC 385
Query: 185 YPIGECGCSVLCCAEPQKGDKCSTEEGSRVFWRHSHSAVHRPV*ASGSE 331
PIG+CGCS+LC EP K DKCST+EGSR+FWR HSA++RPV* GS+
Sbjct: 386 NPIGKCGCSILCRTEP*KRDKCSTKEGSRIFWRRCHSAIYRPV*VGGSQ 532
Score = 149 bits (321), Expect = 1e-035
Identities = 74/108 (68%), Positives = 80/108 (74%)
Frame = -2 / -1
Query: 327 EPLAHTGR*TAE*LCLQNTLLPSSVLHLSPFCGSAQQRTEQPHSPIG*PETASKFS**PC 148
EP HTGR* AE* LQN LLPS VLHLS F GS +QR EQPH PIG ETASKF **P
Sbjct: 528 EPPTHTGR*MAE*QRLQNILLPSLVLHLSLFYGSVRQRIEQPHFPIGLQETASKFF**PS 349
Query: 147 ARRNGLWRRGCR*KDGLVPLAQCEPSTFQTFPRLAGEKS*DVPLEALL 4
A++NGL +R CR*K VPLAQ EPST+QTFPR EK+*DVP E L
Sbjct: 348 AQQNGL*QRECR*KAESVPLAQGEPSTYQTFPRHFAEKN*DVPSEERL 205
Score = 87.7 bits (185), Expect(3) = 5e-031
Identities = 39/59 (66%), Positives = 41/59 (69%)
Frame = +1 / +1
Query: 4 QQRFQRHILAFLSSKSWKCLKGGRLALCQRNQSIFSSASSPPQTISPSAWLLGKLGCSF 180
Q F+RHIL FL SWKCL GRLALCQRN+ F SA S QTI S WLL KLGCSF
Sbjct: 205 QPLFRRHILVFLCKMSWKCLISGRLALCQRNRFSFLSAFSLLQTILLSGWLLEKLGCSF 381
Score = 59.7 bits (124), Expect(3) = 5e-031
Identities = 26/33 (78%), Positives = 28/33 (84%)
Frame = +1 / +1
Query: 229 ATERR*MQH*RRKQSILET*SFCRSSTGMS*WF 327
A E+R*MQH*RRKQ+ILET SFC STGMS WF
Sbjct: 430 AIEKR*MQH*RRKQNILETLSFCHLSTGMSWWF 528
Score = 28.6 bits (56), Expect(2) = 2e-048
Identities = 10/11 (90%), Positives = 11/11 (100%)
Frame = -1 / -1
Query: 364 LCTPY*HIATV 332
+CTPY*HIATV
Sbjct: 564 ICTPY*HIATV 532
Score = 25.4 bits (49), Expect(2) = 2e-043
Identities = 9/10 (90%), Positives = 10/10 (100%)
Frame = +3 / +2
Query: 330 KTVAICQYGV 359
+TVAICQYGV
Sbjct: 530 QTVAICQYGV 559
Score = 24.9 bits (48), Expect(3) = 5e-031
Identities = 8/10 (80%), Positives = 9/10 (90%)
Frame = +2 / +1
Query: 332 NGCDMSIRGA 361
N CDMS+RGA
Sbjct: 532 NSCDMSVRGA 561
Score = 24.4 bits (47), Expect(2) = 1e-046
Identities = 8/9 (88%), Positives = 9/9 (100%)
Frame = -3 / -3
Query: 362 VHPVLTYRN 336
+HPVLTYRN
Sbjct: 562 LHPVLTYRN 536
>gb|BJ314578.1|BJ314578 BJ314578 Y. Ogihara unpublished cDNA library, Wh_yf Triticum
aestivum cDNA clone whyf13f10 5', mRNA sequence
Length = 703
Score = 135 bits (289), Expect(2) = 4e-056
Identities = 53/77 (68%), Positives = 67/77 (87%)
Frame = +3 / +3
Query: 189 QSGNAVARFFVALSHRKEINAALKKEAEYFGDIVILPFIDRYELVVLKTVAICQYGVHNV 368
+S N+VARFFVAL+ +KE+N LKKEAE+FGDIV++PF+D Y+LVVLKT+AI +YGV V
Sbjct: 237 RSSNSVARFFVALNGKKEVNEELKKEAEFFGDIVLVPFMDSYDLVVLKTIAIAEYGVRVV 416
Query: 369 TADYIMKCDDDTFVRLD 419
A Y+MKCDDDTFVR+D
Sbjct: 417 QAKYVMKCDDDTFVRID 467
Score = 103 bits (219), Expect(2) = 4e-056
Identities = 40/57 (70%), Positives = 47/57 (82%)
Frame = +3 / +3
Query: 3 ATALPKAHPSFSLQQVLEMSERWKARTVPEEPIHLFIGILSATNHFAERMAIRKTWM 173
A LPK+HPSF Q+ LEMSE+WKA +P EP+ LFIGILSA NHFAERMA+RK+WM
Sbjct: 54 AAHLPKSHPSFDPQRYLEMSEQWKASPLPTEPVELFIGILSAANHFAERMAVRKSWM 224
Score = 64.8 bits (135), Expect(2) = 2e-022
Identities = 36/78 (46%), Positives = 39/78 (50%)
Frame = -1 / -1
Query: 424 TISSRTKVSSSHFMM*SAVTLCTPY*HIATVFRTTSSYRSMNGRMTMSPKYXXXXXXXXX 245
T S T VSSSHF+ A T TPY +A VF+TT S SM G TMSPK
Sbjct: 472 TASILTNVSSSHFITYFACTTRTPYSAMAIVFKTTRS*LSMKGTRTMSPKNSASFFSSSL 293
Query: 244 XXXXXXXATKNRATAFPD 191
ATKNRAT D
Sbjct: 292 TSFFPFRATKNRATLLDD 239
Score = 60.6 bits (126), Expect(2) = 2e-022
Identities = 27/47 (57%), Positives = 29/47 (61%)
Frame = -1 / -1
Query: 154 AMRSAKWFVAERMPMKRWIGSSGTVRAFHLSDISKTCWREKLGCAFG 14
A+RSAKW AERMPM GS G AFH SDIS+ KLGC G
Sbjct: 205 AIRSAKWLAAERMPMNSSTGSVGRGEAFHCSDISRYRCGSKLGCDLG 65
>gb|CN008830.1|CN008830 WHE2645_F07_K13ZE Wheat Fusarium graminearum infected spike cDNA
library Triticum aestivum cDNA clone WHE2645_F07_K13,
mRNA sequence
Length = 519
Score = 135 bits (289), Expect(2) = 6e-055
Identities = 53/77 (68%), Positives = 67/77 (87%)
Frame = +3 / +2
Query: 189 QSGNAVARFFVALSHRKEINAALKKEAEYFGDIVILPFIDRYELVVLKTVAICQYGVHNV 368
+S N+VARFFVAL+ +KE+N LKKEAE+FGDIV++PF+D Y+LVVLKT+AI +YGV V
Sbjct: 176 RSSNSVARFFVALNGKKEVNEELKKEAEFFGDIVLVPFMDSYDLVVLKTIAIAEYGVRVV 355
Query: 369 TADYIMKCDDDTFVRLD 419
A Y+MKCDDDTFVR+D
Sbjct: 356 QAKYVMKCDDDTFVRID 406
Score = 98.7 bits (209), Expect(2) = 6e-055
Identities = 37/53 (69%), Positives = 44/53 (83%)
Frame = +3 / +2
Query: 15 PKAHPSFSLQQVLEMSERWKARTVPEEPIHLFIGILSATNHFAERMAIRKTWM 173
PK+HPSF Q+ LEMSE+WK +P EP+ LFIGILSA NHFAERMA+RK+WM
Sbjct: 5 PKSHPSFDPQRYLEMSEQWKTSPLPTEPVELFIGILSAANHFAERMAVRKSWM 163
Score = 64.8 bits (135), Expect(2) = 5e-022
Identities = 36/78 (46%), Positives = 39/78 (50%)
Frame = -1 / -1
Query: 424 TISSRTKVSSSHFMM*SAVTLCTPY*HIATVFRTTSSYRSMNGRMTMSPKYXXXXXXXXX 245
T S T VSSSHF+ A T TPY +A VF+TT S SM G TMSPK
Sbjct: 411 TASILTNVSSSHFITYFACTTRTPYSAMAIVFKTTRS*LSMKGTRTMSPKNSASFFSSSL 232
Query: 244 XXXXXXXATKNRATAFPD 191
ATKNRAT D
Sbjct: 231 TSFFPFRATKNRATLLDD 178
Score = 58.8 bits (122), Expect(2) = 5e-022
Identities = 26/47 (55%), Positives = 28/47 (59%)
Frame = -1 / -1
Query: 154 AMRSAKWFVAERMPMKRWIGSSGTVRAFHLSDISKTCWREKLGCAFG 14
A+RSAKW AERMPM GS G FH SDIS+ KLGC G
Sbjct: 144 AIRSAKWLAAERMPMNSSTGSVGRGEVFHCSDISRYRCGSKLGCDLG 4
>gb|CK209599.1|CK209599 FGAS021371 Triticum aestivum FGAS: Library 5 GATE 7 Triticum
aestivum cDNA, mRNA sequence
Length = 1130
Score = 171 bits (369), Expect(2) = 2e-047
Identities = 70/100 (70%), Positives = 83/100 (83%)
Frame = +3 / +3
Query: 123 SATNHFAERMAIRKTWMQFPAIQSGNAVARFFVALSHRKEINAALKKEAEYFGDIVILPF 302
+A+NH AERMA+RKTWMQ I+S VARFFVAL+ RKE+N LKKEAEY GDIVILPF
Sbjct: 84 AASNHSAERMAVRKTWMQTSEIKSSKVVARFFVALNSRKEVNVMLKKEAEYLGDIVILPF 263
Query: 303 IDRYELVVLKTVAICQYGVHNVTADYIMKCDDDTFVRLDI 422
IDRYEL V T+AIC+YGV N+TA ++MKCDD TFVR+D+
Sbjct: 264 IDRYELGVRGTIAICEYGVQNLTAVHVMKCDDYTFVRVDV 383
Score = 101 bits (216), Expect(2) = 2e-023
Identities = 54/107 (50%), Positives = 63/107 (58%)
Frame = -1 / -2
Query: 424 TISSRTKVSSSHFMM*SAVTLCTPY*HIATVFRTTSSYRSMNGRMTMSPKYXXXXXXXXX 245
T S+ T V SSHFM +AV TPY IA V RT SS RS+NG+MT+SPKY
Sbjct: 385 TTSTLTNV*SSHFMTWTAVKFWTPYSQIAIVPRTPSS*RSINGKMTISPKYSASFFSITL 206
Query: 244 XXXXXXXATKNRATAFPDWIAGNCIQVFLIAMRSAKWFVAERMPMKR 104
ATKNRAT D I+ CIQVFL AMRSA+ F A + K+
Sbjct: 205 TSFLEFSATKNRATTLEDLISEVCIQVFLTAMRSAE*FDAAPISDKK 65
Score = 37.3 bits (75), Expect(2) = 2e-047
Identities = 12/22 (54%), Positives = 19/22 (86%)
Frame = +3 / +2
Query: 51 LEMSERWKARTVPEEPIHLFIG 116
LEMS++W+++ +P +PI LFIG
Sbjct: 11 LEMSDKWRSQPLPRDPIWLFIG 76
Score = 26.7 bits (52), Expect(2) = 2e-023
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = -1 / -3
Query: 115 PMKRWIGSSGTVRAFHLSDIS 53
P+K IGS G+ HLSDIS
Sbjct: 75 PIKSQIGSRGSGWDLHLSDIS 13
>gb|AL825824.1|AL825824 AL825824 p:234 Triticum aestivum cDNA clone H03_p234_plate_16, mRNA
sequence
Length = 538
Score = 136 bits (291), Expect(2) = 2e-044
Identities = 54/80 (67%), Positives = 68/80 (85%)
Frame = +3 / +1
Query: 180 PAIQSGNAVARFFVALSHRKEINAALKKEAEYFGDIVILPFIDRYELVVLKTVAICQYGV 359
P +S N+VARFFVAL+ +KE+N LKKEAE+FGDIV++PF+D Y+LVVLKT+AI +YGV
Sbjct: 97 PQGRSSNSVARFFVALNGKKEVNEELKKEAEFFGDIVLVPFMDSYDLVVLKTIAIAEYGV 276
Query: 360 HNVTADYIMKCDDDTFVRLD 419
V A Y+MKCDDDTFVR+D
Sbjct: 277 RVVQAKYVMKCDDDTFVRID 336
Score = 62.9 bits (131), Expect(2) = 2e-044
Identities = 23/30 (76%), Positives = 27/30 (90%)
Frame = +3 / +3
Query: 84 VPEEPIHLFIGILSATNHFAERMAIRKTWM 173
+P EP+ LFIGILSA NHFAERMA+RK+WM
Sbjct: 3 LPTEPVELFIGILSAANHFAERMAVRKSWM 92
>gb|BJ320066.1|BJ320066 BJ320066 Y. Ogihara unpublished cDNA library, Wh_yf Triticum
aestivum cDNA clone whyf13f10 3', mRNA sequence
Length = 757
Score = 135 bits (289), Expect(2) = 1e-040
Identities = 53/77 (68%), Positives = 67/77 (87%)
Frame = +3 / -2
Query: 189 QSGNAVARFFVALSHRKEINAALKKEAEYFGDIVILPFIDRYELVVLKTVAICQYGVHNV 368
+S N+VARFFVAL+ +KE+N LKKEAE+FGDIV++PF+D Y+LVVLKT+AI +YGV V
Sbjct: 678 RSSNSVARFFVALNGKKEVNEELKKEAEFFGDIVLVPFMDSYDLVVLKTIAIAEYGVRVV 499
Query: 369 TADYIMKCDDDTFVRLD 419
A Y+MKCDDDTFVR+D
Sbjct: 498 QAKYVMKCDDDTFVRID 448
Score = 51.0 bits (105), Expect(2) = 1e-040
Identities = 19/22 (86%), Positives = 21/22 (95%)
Frame = +3 / -2
Query: 108 FIGILSATNHFAERMAIRKTWM 173
FIGILSA NHFAERMA+RK+WM
Sbjct: 756 FIGILSAANHFAERMAVRKSWM 691
>gb|AL830360.1|AL830360 AL830360 q:343 Triticum aestivum cDNA clone D08_q343_plate_4, mRNA
sequence
Length = 616
Score = 139 bits (299), Expect(2) = 1e-036
Identities = 58/79 (73%), Positives = 67/79 (84%)
Frame = +3 / +2
Query: 183 AIQSGNAVARFFVALSHRKEINAALKKEAEYFGDIVILPFIDRYELVVLKTVAICQYGVH 362
A ++ N VARFFVAL RKE+N LKKEAE+FGDIVI+PF+DRY+LVVLKTVAIC+YGV
Sbjct: 53 AQKTSNVVARFFVALHARKEVNLELKKEAEFFGDIVIVPFMDRYDLVVLKTVAICEYGVR 232
Query: 363 NVTADYIMKCDDDTFVRLD 419
V+A Y MKCDD TFVRLD
Sbjct: 233 AVSAKYXMKCDDXTFVRLD 289
Score = 33.6 bits (67), Expect(2) = 1e-036
Identities = 12/13 (92%), Positives = 12/13 (92%)
Frame = +3 / +2
Query: 135 HFAERMAIRKTWM 173
HFAERMA RKTWM
Sbjct: 8 HFAERMAARKTWM 46
>gb|CN012258.1|CN012258 WHE3894_E09_J18ZS Wheat Fusarium graminearum infected spike cDNA
library Triticum aestivum cDNA clone WHE3894_E09_J18,
mRNA sequence
Length = 599
Score = 74.4 bits (156), Expect(3) = 1e-035
Identities = 28/44 (63%), Positives = 36/44 (81%)
Frame = +3 / +1
Query: 42 QQVLEMSERWKARTVPEEPIHLFIGILSATNHFAERMAIRKTWM 173
Q+ L+MSE+WKA +P EP+ L IGILSATNH +RMA+RK+WM
Sbjct: 7 QRYLKMSEQWKASPLPTEPVKLIIGILSATNHCPQRMAVRKSWM 138
Score = 57.4 bits (119), Expect(3) = 1e-035
Identities = 23/42 (54%), Positives = 33/42 (78%)
Frame = +3 / +1
Query: 189 QSGNAVARFFVALSHRKEINAALKKEAEYFGDIVILPFIDRY 314
+S N+ ARFF+AL+ +K+ N LKK+A++FGDIV PF+D Y
Sbjct: 151 KSSNSDARFFIALNGKKDDN*DLKKDADFFGDIVQAPFMDSY 276
Score = 56.1 bits (116), Expect(3) = 1e-035
Identities = 22/36 (61%), Positives = 27/36 (75%)
Frame = +3 / +3
Query: 312 YELVVLKTVAICQYGVHNVTADYIMKCDDDTFVRLD 419
+ + VLKT+AI GV V A Y+MKCDDDTFVR+D
Sbjct: 276 WTISVLKTIAIADNGVRVVQATYVMKCDDDTFVRID 383
>gb|CA610463.1|CA610463 wr1.pk0119.e12 wr1 Triticum aestivum cDNA clone wr1.pk0119.e12 5'
end, mRNA sequence
Length = 594
Score = 135 bits (289), Expect = 3e-031
Identities = 53/77 (68%), Positives = 67/77 (87%)
Frame = +3 / +1
Query: 189 QSGNAVARFFVALSHRKEINAALKKEAEYFGDIVILPFIDRYELVVLKTVAICQYGVHNV 368
+S N+VARFFVAL+ +KE+N LKKEAE+FGDIV++PF+D Y+LVVLKT+AI +YGV V
Sbjct: 10 RSSNSVARFFVALNGKKEVNEELKKEAEFFGDIVLVPFMDSYDLVVLKTIAIAEYGVRVV 189
Query: 369 TADYIMKCDDDTFVRLD 419
A Y+MKCDDDTFVR+D
Sbjct: 190 QAKYVMKCDDDTFVRID 240
>gb|BE429913.1|BE429913 TAS005.B02R990622 ITEC TAS Wheat cDNA Library Triticum aestivum
cDNA clone TAS005.B02, mRNA sequence
Length = 496
Score = 84.9 bits (179), Expect(2) = 3e-030
Identities = 32/61 (52%), Positives = 44/61 (72%)
Frame = +3 / +2
Query: 237 KEINAALKKEAEYFGDIVILPFIDRYELVVLKTVAICQYGVHNVTADYIMKCDDDTFVRL 416
+++N L +EA+ +GDI +PF+D Y L+ LKTVAIC +G + A YIMK DDD FVR+
Sbjct: 278 EQVNMELWREAQLYGDIQFMPFVDYYTLITLKTVAICMFGTKIMPAKYIMKTDDDAFVRI 457
Query: 417 D 419
D
Sbjct: 458 D 460
Score = 66.1 bits (138), Expect(2) = 3e-030
Identities = 25/55 (45%), Positives = 36/55 (65%)
Frame = +3 / +1
Query: 63 ERWKARTVPEEPIHLFIGILSATNHFAERMAIRKTWMQFPAIQSGNAVARFFVAL 227
E KA VP++ I L +G+ S N+F RMA+R+TWMQ+ +++SG RFF L
Sbjct: 34 ELLKAPPVPKKRIFLLVGVFSTGNNFKRRMALRRTWMQYESVRSGEVAVRFFTGL 198
>gb|BJ260192.1|BJ260192 BJ260192 Y. Ogihara unpublished cDNA library, Wh_h Triticum
aestivum cDNA clone whh23o06 5', mRNA sequence
Length = 588
Score = 122 bits (260), Expect = 3e-027
Identities = 47/56 (83%), Positives = 54/56 (96%)
Frame = +3 / +2
Query: 255 LKKEAEYFGDIVILPFIDRYELVVLKTVAICQYGVHNVTADYIMKCDDDTFVRLDI 422
LKKEAEYFGDIVILPFIDRYELVVLKT+AIC+YGV N+TA ++MKCDDDTFVR+D+
Sbjct: 8 LKKEAEYFGDIVILPFIDRYELVVLKTIAICEYGVQNLTAAHVMKCDDDTFVRVDV 175
Database: Triticum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 3:01 PM
Number of letters in database: 367,240,239
Number of sequences in database: 636,343
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 458,574,405
Number of Sequences: 636343
Number of extensions: 7171554
Number of successful extensions: 278413
Number of sequences better than 1.0e-020: 17
length of database: 122,413,413
effective HSP length: 51
effective length of database: 89,959,920
effective search space used: 8006432880
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)