TBLASTX 2.2.10 [Oct-19-2004]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= QAS4c05.yg.2.1
         (318 letters)

Database: Triticum_nucl_with_EST.fasta 
           636,343 sequences; 367,240,239 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|BI479606.1|BI479606  WHE3455_H02_O03ZS Wheat pre-anthesis...   135   1e-031
gb|BJ259682.1|BJ259682  BJ259682 Y. Ogihara unpublished cDNA...   134   3e-031
gb|AF347067.1|  Triticum aestivum sucrose-phosphate synthase...   134   3e-031

>gb|BI479606.1|BI479606 WHE3455_H02_O03ZS Wheat pre-anthesis spike cDNA library Triticum
           aestivum cDNA clone WHE3455_H02_O03, mRNA sequence
          Length = 479

 Score =  135 bits (290), Expect = 1e-031
 Identities = 57/79 (72%), Positives = 64/79 (81%)
 Frame = -3 / +3

                                                                       
Query: 238 RLFVIAVXCYXXXXXASKKMXQVIXEVFXXVRSDSQMFKISGFTLSXAMPLSETLQLLQL 59
           RLF++AV CY     ASKKM QVI EVF  +RSD+Q+ KISGF LS AMPLSETLQLLQ+
Sbjct: 27  RLFIVAVDCYGDDGRASKKMLQVIQEVFRAIRSDTQLSKISGFALSTAMPLSETLQLLQM 206

                              
Query: 58  GKIPAXDFDALICGSGSEV 2
           GK+P  DFDALICGSGSEV
Sbjct: 207 GKVPPTDFDALICGSGSEV 263




 Score =  117 bits (250), Expect = 4e-026
 Identities = 52/79 (65%), Positives = 55/79 (69%)
 Frame = +3 / -2

                                                                       
Query: 3   TSLPLPQMRASKSXAGILPSCRSWSVSDNGMAXDSVNPEILNIWESDRTXLKTSXITCXI 182
           TSLPLPQM ASKS  G  P CRSWSVSD+G+A DS NPEIL+ W SDR  L TS ITC I
Sbjct: 262 TSLPLPQMSASKSVGGTFPICRSWSVSDSGIAVDSANPEILDNWVSDRIALNTSWITCNI 83

                              
Query: 183 FLLAXXXXX*QXTAMTNKR 239
           FLLA     *Q TA  N R
Sbjct: 82  FLLARPSSP*QSTATINSR 26



>gb|BJ259682.1|BJ259682 BJ259682 Y. Ogihara unpublished cDNA library, Wh_h Triticum
           aestivum cDNA clone whh21m21 5', mRNA sequence
          Length = 656

 Score =  134 bits (288), Expect = 3e-031
 Identities = 58/79 (73%), Positives = 63/79 (79%)
 Frame = -3 / +1

                                                                       
Query: 238 RLFVIAVXCYXXXXXASKKMXQVIXEVFXXVRSDSQMFKISGFTLSXAMPLSETLQLLQL 59
           RLF++AV CY     ASKKM QVI EVF  VRSD+Q+ KISGF LS AMPLSETLQLLQ 
Sbjct: 52  RLFIVAVDCYGDDGRASKKMLQVIQEVFRAVRSDTQLSKISGFALSTAMPLSETLQLLQT 231

                              
Query: 58  GKIPAXDFDALICGSGSEV 2
           GK+P  DFDALICGSGSEV
Sbjct: 232 GKVPPTDFDALICGSGSEV 288




 Score =  120 bits (257), Expect = 5e-027
 Identities = 53/79 (67%), Positives = 56/79 (70%)
 Frame = +3 / -1

                                                                       
Query: 3   TSLPLPQMRASKSXAGILPSCRSWSVSDNGMAXDSVNPEILNIWESDRTXLKTSXITCXI 182
           TSLPLPQM ASKS  G  P CRSWSVSD+G+A DS NPEIL+ W SDRT L TS ITC I
Sbjct: 287 TSLPLPQMSASKSVGGTFPVCRSWSVSDSGIAVDSANPEILDNWVSDRTALNTSWITCSI 108

                              
Query: 183 FLLAXXXXX*QXTAMTNKR 239
           FLLA     *Q TA  N R
Sbjct: 107 FLLARPSSP*QSTATMNSR 51



>gb|AF347067.1| Triticum aestivum sucrose-phosphate synthase 5 mRNA, partial cds
          Length = 1999

 Score =  134 bits (288), Expect = 3e-031
 Identities = 58/79 (73%), Positives = 63/79 (79%)
 Frame = -3 / +2

                                                                        
Query: 238  RLFVIAVXCYXXXXXASKKMXQVIXEVFXXVRSDSQMFKISGFTLSXAMPLSETLQLLQL 59
            RLF++AV CY     ASKKM QVI EVF  VRSD+Q+ KISGF LS AMPLSETLQLLQ 
Sbjct: 863  RLFIVAVDCYGDDGRASKKMLQVIQEVFRAVRSDTQLSKISGFALSTAMPLSETLQLLQT 1042

                               
Query: 58   GKIPAXDFDALICGSGSEV 2
            GK+P  DFDALICGSGSEV
Sbjct: 1043 GKVPPTDFDALICGSGSEV 1099




 Score =  120 bits (257), Expect = 5e-027
 Identities = 53/79 (67%), Positives = 56/79 (70%)
 Frame = +3 / -2

                                                                        
Query: 3    TSLPLPQMRASKSXAGILPSCRSWSVSDNGMAXDSVNPEILNIWESDRTXLKTSXITCXI 182
            TSLPLPQM ASKS  G  P CRSWSVSD+G+A DS NPEIL+ W SDRT L TS ITC I
Sbjct: 1098 TSLPLPQMSASKSVGGTFPVCRSWSVSDSGIAVDSANPEILDNWVSDRTALNTSWITCSI 919

                               
Query: 183  FLLAXXXXX*QXTAMTNKR 239
            FLLA     *Q TA  N R
Sbjct: 918  FLLARPSSP*QSTATMNSR 862



  Database: Triticum_nucl_with_EST.fasta
    Posted date:  Feb 7, 2006  3:01 PM
  Number of letters in database: 367,240,239
  Number of sequences in database:  636,343
  
Lambda     K      H
   0.318    0.134    0.401 


Matrix: BLOSUM62
Number of Hits to DB: 151,508,239
Number of Sequences: 636343
Number of extensions: 1142330
Number of successful extensions: 87496
Number of sequences better than 1.0e-020: 3
length of database: 122,413,413
effective HSP length: 50
effective length of database: 90,596,263
effective search space used: 4982794465
frameshift window, decay const: 40,  0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)