TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= QAE36e08.yg.2.1
(352 letters)
Database: Triticum_nucl_with_EST.fasta
636,343 sequences; 367,240,239 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CD909805.1|CD909805 G468.113J06R010929 G468 Triticum aes... 239 8e-063
gb|CA712305.1|CA712305 wdk3c.pk005.c9 wdk3c Triticum aestiv... 179 3e-059
gb|BQ294620.1|BQ294620 WHE2851_E09_I17ZS Wheat unstressed r... 219 1e-056
gb|BE430514.1|BE430514 SUN003.F12R991208 ITEC SUN Wheat cDN... 131 5e-045
gb|CA622381.1|CA622381 wl1n.pk0091.e3 wl1n Triticum aestivu... 176 1e-043
gb|CV775699.1|CV775699 FGAS070103 Triticum aestivum FGAS: L... 173 8e-043
gb|BQ753073.1|BQ753073 WHE4122_F11_K22ZS Wheat salt-stresse... 168 3e-041
gb|CK200003.1|CK200003 FGAS008510 Triticum aestivum FGAS: L... 147 3e-039
gb|CD491640.1|CD491640 WHE2851_E09_I17ZT CS wheat unstresse... 159 1e-038
gb|CA620836.1|CA620836 wl1n.pk0069.g6 wl1n Triticum aestivu... 129 4e-036
gb|CA625498.1|CA625498 wl1n.pk0140.d11 wl1n Triticum aestiv... 119 1e-026
gb|CD909804.1|CD909804 G468.113J06F010821 G468 Triticum aes... 100 9e-021
>gb|CD909805.1|CD909805 G468.113J06R010929 G468 Triticum aestivum cDNA clone G468113J06,
mRNA sequence
Length = 724
Score = 239 bits (517), Expect = 8e-063
Identities = 94/106 (88%), Positives = 100/106 (94%)
Frame = -1 / -3
Query: 319 GASMXXVSFQLPDTVSLLQAHYHHIPGVFTDDFPALPPVFFDFTSQNVPRALWQPVKGTR 140
GASM VSFQLP+TV LLQAHYH IPGVFT+DFPA PPV FD+TSQNVPRALWQPVKGTR
Sbjct: 716 GASMNNVSFQLPNTVFLLQAHYHRIPGVFTEDFPARPPVVFDYTSQNVPRALWQPVKGTR 537
Query: 139 LYRVRYGAVVQIVFQDTGIFAAEEHPMHIHGYHFYVLATGFGNYDP 2
LYRV+YGAVVQ+VFQDTGIFAAEEHPMHIHGYHFYVLATGFGNY+P
Sbjct: 536 LYRVKYGAVVQMVFQDTGIFAAEEHPMHIHGYHFYVLATGFGNYNP 399
Score = 227 bits (490), Expect = 4e-059
Identities = 92/106 (86%), Positives = 93/106 (87%)
Frame = +3 / +1
Query: 3 GS*LPNPVAST*KW*PWMCMGCSSAAKMPVSWNTICTTAPYLTRYRRVPLTGCHSARGTF 182
G *LPNPVAST*KW*PWMCMGCSSAAKMPVSWNTICTTAPYLTRY RVP TGCHSARGTF
Sbjct: 400 GL*LPNPVAST*KW*PWMCMGCSSAAKMPVSWNTICTTAPYLTRYSRVPFTGCHSARGTF 579
Query: 183 CEVKSKNTGGSAGKSSVNTPGMWW*CACSRETVSGSWNDTXXMLAP 320
CEV SK TGG AGKSSV TPGM W*CA SR+TV GSW DT MLAP
Sbjct: 580 CEV*SKTTGGRAGKSSVKTPGMRW*CAWSRKTVLGSWKDTLFMLAP 717
Score = 144 bits (310), Expect(2) = 2e-040
Identities = 60/72 (83%), Positives = 63/72 (87%)
Frame = -3 / -2
Query: 218 GAPARVLRLHLAERPARAVAARQGHPPVPRQVRRRGADRVPGHGHLRRRGAPHAHPRLPL 39
G+PA LRLHLAERP RAVAAR+GH VPRQVRRRGAD VPGHGHLRR GAPHAHPRLPL
Sbjct: 615 GSPAGGLRLHLAERPPRAVAAREGHAAVPRQVRRRGADGVPGHGHLRRGGAPHAHPRLPL 436
Query: 38 LRAGHGVRQLRP 3
LRA H VRQL+P
Sbjct: 435 LRARHRVRQLQP 400
Score = 40.5 bits (82), Expect(2) = 2e-040
Identities = 15/20 (75%), Positives = 17/20 (85%)
Frame = -3 / -2
Query: 317 REHXXRVVPAPRHRLPAAGA 258
REH RV+PAP+HRLPA GA
Sbjct: 714 REHEQRVLPAPQHRLPAPGA 655
>gb|CA712305.1|CA712305 wdk3c.pk005.c9 wdk3c Triticum aestivum cDNA clone wdk3c.pk005.c9 5'
end, mRNA sequence
Length = 492
Score = 179 bits (385), Expect(2) = 4e-045
Identities = 71/96 (73%), Positives = 72/96 (75%)
Frame = +3 / -3
Query: 63 GCSSAAKMPVSWNTICTTAPYLTRYRRVPLTGCHSARGTFCEVKSKNTGGSAGKSSVNTP 242
G + P WNTICTTAPYLTRY RVP TGCHSARGTFCEV SK TGG AGKSSV TP
Sbjct: 304 GAPPRRRCPCPWNTICTTAPYLTRYSRVPFTGCHSARGTFCEV*SKTTGGRAGKSSVKTP 125
Query: 243 GMWW*CACSRETVSGSWNDTXXMLAPXXXXXXPWQN 350
GM W*CACSRETV GSWNDT MLAP PWQN
Sbjct: 124 GMRW*CACSRETVLGSWNDTLFMLAPNRVLLGPWQN 17
Score = 176 bits (378), Expect(2) = 3e-059
Identities = 71/89 (79%), Positives = 76/89 (85%)
Frame = -1 / +3
Query: 352 PFCQGXXXXXXGASMXXVSFQLPDTVSLLQAHYHHIPGVFTDDFPALPPVFFDFTSQNVP 173
PFCQG GASM VSFQLP+TVSLLQAHYH IPGVFT+DFPA PPV FD+TSQNVP
Sbjct: 15 PFCQGPNNTRFGASMNNVSFQLPNTVSLLQAHYHRIPGVFTEDFPARPPVVFDYTSQNVP 194
Query: 172 RALWQPVKGTRLYRVRYGAVVQIVFQDTG 86
RALWQPVKGTRLYRV+YGAVVQ+VFQ G
Sbjct: 195 RALWQPVKGTRLYRVKYGAVVQMVFQGHG 281
Score = 71.2 bits (149), Expect(2) = 3e-059
Identities = 26/32 (81%), Positives = 27/32 (84%)
Frame = -1 / +1
Query: 97 QDTGIFAAEEHPMHIHGYHFYVLATGFGNYDP 2
+DTGIFAAEEHPMHIHGYHFYVL TGF P
Sbjct: 271 KDTGIFAAEEHPMHIHGYHFYVLTTGFRQLQP 366
Score = 70.7 bits (148), Expect(4) = 2e-035
Identities = 31/40 (77%), Positives = 33/40 (82%)
Frame = -3 / +2
Query: 215 APARVLRLHLAERPARAVAARQGHPPVPRQVRRRGADRVP 96
+PA L LHLAERP RAVAAR+GH VPRQVRRRGAD VP
Sbjct: 152 SPAGGL*LHLAERPPRAVAAREGHAAVPRQVRRRGADGVP 271
Score = 65.7 bits (137), Expect(3) = 3e-032
Identities = 25/26 (96%), Positives = 25/26 (96%)
Frame = +3 / -2
Query: 18 NPVAST*KW*PWMCMGCSSAAKMPVS 95
NPV ST*KW*PWMCMGCSSAAKMPVS
Sbjct: 350 NPVVST*KW*PWMCMGCSSAAKMPVS 273
Score = 57.4 bits (119), Expect(4) = 2e-035
Identities = 22/26 (84%), Positives = 22/26 (84%)
Frame = -3 / +3
Query: 95 GHGHLRRRGAPHAHPRLPLLRAGHGV 18
GHGHLRR GAPHAHP LPLLRA H V
Sbjct: 273 GHGHLRRGGAPHAHPWLPLLRANHRV 350
Score = 54.7 bits (113), Expect(3) = 3e-032
Identities = 24/30 (80%), Positives = 24/30 (80%)
Frame = +2 / -2
Query: 95 LEHDLHHGAVPDAVQAGALDGLPQRARDVL 184
LEH LHHGAV DAVQ AL GLPQRA DVL
Sbjct: 272 LEHHLHHGAVLDAVQPRALHGLPQRAGDVL 183
Score = 53.3 bits (110), Expect(3) = 3e-032
Identities = 23/31 (74%), Positives = 23/31 (74%)
Frame = +2 / -2
Query: 260 RLQQGDGVGELERHXXHARAXXGXXXALAER 352
RLQQGDGVGELERH HAR G ALAER
Sbjct: 107 RLQQGDGVGELERHVVHARPEPGVVGALAER 15
Score = 50.6 bits (104), Expect(4) = 2e-035
Identities = 21/31 (67%), Positives = 22/31 (70%)
Frame = -3 / +2
Query: 350 VLPGPXXXXXXREHXXRVVPAPRHRLPAAGA 258
VLPGP EH RVVPAP+HRLPAAGA
Sbjct: 17 VLPGPQQHPVRGEHEQRVVPAPQHRLPAAGA 109
Score = 20.8 bits (39), Expect(4) = 2e-035
Identities = 6/7 (85%), Positives = 7/7 (100%)
Frame = -1 / +2
Query: 22 GFGNYDP 2
GFGNY+P
Sbjct: 347 GFGNYNP 367
Score = 20.8 bits (39), Expect(2) = 4e-045
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = +1 / -3
Query: 19 TPWPARRSGS 48
T W ARRSGS
Sbjct: 349 TRWLARRSGS 320
>gb|BQ294620.1|BQ294620 WHE2851_E09_I17ZS Wheat unstressed root tip cDNA library Triticum
aestivum cDNA clone WHE2851_E09_I17, mRNA sequence
Length = 591
Score = 219 bits (472), Expect = 1e-056
Identities = 87/105 (82%), Positives = 92/105 (87%)
Frame = -1 / +2
Query: 352 PFCQGXXXXXXGASMXXVSFQLPDTVSLLQAHYHHIPGVFTDDFPALPPVFFDFTSQNVP 173
PFCQG GASM VSFQLP TV+LLQAHY IPGVFTDDFPA PPV FD+TSQ+VP
Sbjct: 275 PFCQGPNSTRLGASMNNVSFQLPSTVALLQAHYGRIPGVFTDDFPARPPVAFDYTSQSVP 454
Query: 172 RALWQPVKGTRLYRVRYGAVVQIVFQDTGIFAAEEHPMHIHGYHF 38
RALWQPVKGTR+YRVRYGAVVQ+VFQDTGIFAAEEHPMHIHGYHF
Sbjct: 455 RALWQPVKGTRVYRVRYGAVVQMVFQDTGIFAAEEHPMHIHGYHF 589
Score = 212 bits (458), Expect = 1e-054
Identities = 86/104 (82%), Positives = 86/104 (82%)
Frame = +3 / -1
Query: 36 *KW*PWMCMGCSSAAKMPVSWNTICTTAPYLTRYRRVPLTGCHSARGTFCEVKSKNTGGS 215
*KW*PWMCMGCSSAAKMPVSWNTICTTAPYLTRY RVPLTGCHSARGT CEV SK TGG
Sbjct: 591 *KW*PWMCMGCSSAAKMPVSWNTICTTAPYLTRYTRVPLTGCHSARGTLCEV*SKATGGR 412
Query: 216 AGKSSVNTPGMWW*CACSRETVSGSWNDTXXMLAPXXXXXXPWQ 347
AGKSSV TPGM *CACSR TV GSWNDT MLAP PWQ
Sbjct: 411 AGKSSVKTPGMRP*CACSRATVLGSWNDTLFMLAPSRVLLGPWQ 280
Score = 117 bits (251), Expect(2) = 3e-035
Identities = 50/61 (81%), Positives = 51/61 (83%)
Frame = -3 / +1
Query: 218 GAPARVLRLHLAERPARAVAARQGHPPVPRQVRRRGADRVPGHGHLRRRGAPHAHPRLPL 39
G+ A LRLHLAERP RAVAA QGH VPRQVRRRGAD VPGHGHLR GAPHAHPRLPL
Sbjct: 409 GSAAGGLRLHLAERPPRAVAAGQGHAGVPRQVRRRGADGVPGHGHLRGGGAPHAHPRLPL 588
Query: 38 L 36
L
Sbjct: 589 L 591
Score = 49.2 bits (101), Expect(2) = 3e-035
Identities = 20/31 (64%), Positives = 22/31 (70%)
Frame = -3 / +1
Query: 350 VLPGPXXXXXXREHXXRVVPAPRHRLPAAGA 258
+LPGP REH RVVPAP+HR PAAGA
Sbjct: 277 LLPGPQQHPAGREHEQRVVPAPQHRGPAAGA 369
>gb|BE430514.1|BE430514 SUN003.F12R991208 ITEC SUN Wheat cDNA Library Triticum aestivum
cDNA clone SUN003.F12, mRNA sequence
Length = 844
Score = 131 bits (280), Expect(3) = 5e-045
Identities = 50/53 (94%), Positives = 53/53 (100%)
Frame = -1 / -3
Query: 160 QPVKGTRLYRVRYGAVVQIVFQDTGIFAAEEHPMHIHGYHFYVLATGFGNYDP 2
QPVKGTRLYRV+YGAVVQ+VFQDTGIFAAEEHPMHIHGYHFYVLATGFGNY+P
Sbjct: 560 QPVKGTRLYRVKYGAVVQMVFQDTGIFAAEEHPMHIHGYHFYVLATGFGNYNP 402
Score = 130 bits (278), Expect(2) = 2e-039
Identities = 51/58 (87%), Positives = 52/58 (89%)
Frame = +3 / +1
Query: 3 GS*LPNPVAST*KW*PWMCMGCSSAAKMPVSWNTICTTAPYLTRYRRVPLTGCHSARG 176
G *LPNPVAST*KW*PWMCMGCSSAAKMPVSWNTICTTAPYLTRY RVP TGC + G
Sbjct: 403 GL*LPNPVAST*KW*PWMCMGCSSAAKMPVSWNTICTTAPYLTRYSRVPFTGCTARGG 576
Score = 112 bits (239), Expect(2) = 1e-028
Identities = 45/53 (84%), Positives = 47/53 (88%)
Frame = -3 / -2
Query: 161 AARQGHPPVPRQVRRRGADRVPGHGHLRRRGAPHAHPRLPLLRAGHGVRQLRP 3
AAR+GH VPRQVRRRGAD VPGHGHLRR GAPHAHPRLPLLRA H VRQL+P
Sbjct: 561 AAREGHAAVPRQVRRRGADGVPGHGHLRRGGAPHAHPRLPLLRARHRVRQLQP 403
Score = 61.6 bits (128), Expect(3) = 5e-045
Identities = 24/32 (75%), Positives = 26/32 (81%)
Frame = -1 / -2
Query: 298 SFQLPDTVSLLQAHYHHIPGVFTDDFPALPPV 203
SFQLP+ LLQAH H IPGVFT+DFPA PPV
Sbjct: 696 SFQLPNPSPLLQAHXHRIPGVFTEDFPARPPV 601
Score = 51.9 bits (107), Expect(2) = 2e-039
Identities = 21/34 (61%), Positives = 23/34 (67%)
Frame = +3 / +2
Query: 198 KNTGGSAGKSSVNTPGMWW*CACSRETVSGSWND 299
K TGG AGKSSV TPGM W CA S+ GSW +
Sbjct: 596 KTTGGRAGKSSVKTPGMRWXCAWSKGDGLGSWKE 697
Score = 33.1 bits (66), Expect(2) = 1e-028
Identities = 18/44 (40%), Positives = 19/44 (43%)
Frame = -1 / -1
Query: 286 PDTVSLLQAHYHHIPGVFTDDFPALPPVFFDFTSQNVPRALWQP 155
P VSL P P P D+TSQNVPRAL P
Sbjct: 685 PQPVSLAPGALPPHPRRLHRGLPGSPAGGLDYTSQNVPRALCSP 554
Score = 26.3 bits (51), Expect(3) = 5e-045
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = -3 / -3
Query: 194 LHLAERPARAVAARQG 147
LHLAERP RAV +G
Sbjct: 593 LHLAERPPRAVQPVKG 546
>gb|CA622381.1|CA622381 wl1n.pk0091.e3 wl1n Triticum aestivum cDNA clone wl1n.pk0091.e3 5'
end, mRNA sequence
Length = 486
Score = 176 bits (378), Expect = 1e-043
Identities = 68/104 (65%), Positives = 80/104 (76%)
Frame = -1 / +2
Query: 313 SMXXVSFQLPDTVSLLQAHYHHIPGVFTDDFPALPPVFFDFTSQNVPRALWQPVKGTRLY 134
SM VSF P T SLL AHY+ IPGVFT DFPA PPV FD+T QNV +ALWQPV T+LY
Sbjct: 2 SMNNVSFVFPQTDSLLHAHYYKIPGVFTTDFPAYPPVQFDYTGQNVSQALWQPVPATKLY 181
Query: 133 RVRYGAVVQIVFQDTGIFAAEEHPMHIHGYHFYVLATGFGNYDP 2
+R+G+VVQ+V QDT I E HP+HIHGY F++LA GFGN+DP
Sbjct: 182 PLRFGSVVQLVLQDTSIVTPENHPIHIHGYDFFILAEGFGNFDP 313
Score = 108 bits (230), Expect = 3e-023
Identities = 56/104 (53%), Positives = 60/104 (57%)
Frame = +3 / -1
Query: 3 GS*LPNPVAST*KW*PWMCMGCSSAAKMPVSWNTICTTAPYLTRYRRVPLTGCHSARGTF 182
GS LP P A K *PWM MG S M VS T CTT P L+ Y V TGCH A TF
Sbjct: 312 GSKLPKPSARMKKS*PWMWMGWFSGVTMLVSCRTSCTTEPNLSGYSLVAGTGCHRAWLTF 133
Query: 183 CEVKSKNTGGSAGKSSVNTPGMWW*CACSRETVSGSWNDTXXML 314
C V S TGG AGKS V TPG+ *CA RE+V G +T ML
Sbjct: 132 CPV*SNCTGGYAGKSVVKTPGIL**CAWRRESVCGKTKETLFML 1
>gb|CV775699.1|CV775699 FGAS070103 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 818
Score = 173 bits (372), Expect = 8e-043
Identities = 64/104 (61%), Positives = 81/104 (77%)
Frame = -1 / +1
Query: 316 ASMXXVSFQLPDTVSLLQAHYHHIPGVFTDDFPALPPVFFDFTSQNVPRALWQPVKGTRL 137
ASM VSF P SLL AHY+ +PGV+T DFPA PPV FD+T+QNV ++LWQP+ T+L
Sbjct: 169 ASMNNVSFVFPKATSLLHAHYYDMPGVYTTDFPANPPVQFDYTAQNVSQSLWQPIPATKL 348
Query: 136 YRVRYGAVVQIVFQDTGIFAAEEHPMHIHGYHFYVLATGFGNYD 5
Y++R+G+VVQ+V QDT I E HP+H+HGY FY+LA GFGNYD
Sbjct: 349 YKLRFGSVVQVVLQDTSIVTPENHPIHLHGYDFYILAEGFGNYD 480
Score = 102 bits (218), Expect = 1e-021
Identities = 55/104 (52%), Positives = 58/104 (55%)
Frame = +3 / -1
Query: 6 S*LPNPVAST*KW*PWMCMGCSSAAKMPVSWNTICTTAPYLTRYRRVPLTGCHSARGTFC 185
S*LP P A *K *PW MG S M VS +T CTT P L+ Y V GCH TFC
Sbjct: 479 S*LPKPSARM*KS*PWRWMGWFSGVTMLVSCSTTCTTEPNLSLYSLVAGIGCHRLWLTFC 300
Query: 186 EVKSKNTGGSAGKSSVNTPGMWW*CACSRETVSGSWNDTXXMLA 317
V S TGG AGKS V TPGM *CA RE G +T MLA
Sbjct: 299 AV*SNCTGGLAGKSVVYTPGMS**CAWRREVALGKTKETLFMLA 168
>gb|BQ753073.1|BQ753073 WHE4122_F11_K22ZS Wheat salt-stressed root cDNA library Triticum
aestivum cDNA clone WHE4122_F11_K22, mRNA sequence
Length = 660
Score = 168 bits (361), Expect = 3e-041
Identities = 61/99 (61%), Positives = 78/99 (78%)
Frame = -1 / +2
Query: 301 VSFQLPDTVSLLQAHYHHIPGVFTDDFPALPPVFFDFTSQNVPRALWQPVKGTRLYRVRY 122
VSF P SLL AHY+ +PGV+T DFPA PPV FD+T+QNV ++LWQP+ T+LY++R+
Sbjct: 2 VSFVFPKATSLLHAHYYDMPGVYTTDFPANPPVQFDYTAQNVSQSLWQPIPATKLYKLRF 181
Query: 121 GAVVQIVFQDTGIFAAEEHPMHIHGYHFYVLATGFGNYD 5
G+VVQ+V QDT I E HP+H+HGY FY+LA GFGNYD
Sbjct: 182 GSVVQVVLQDTSIVTPENHPIHLHGYDFYILAEGFGNYD 298
Score = 100 bits (212), Expect = 9e-021
Identities = 53/99 (53%), Positives = 55/99 (55%)
Frame = +3 / -1
Query: 6 S*LPNPVAST*KW*PWMCMGCSSAAKMPVSWNTICTTAPYLTRYRRVPLTGCHSARGTFC 185
S*LP P A *K *PW MG S M VS T CTT P L+ Y V GCH TFC
Sbjct: 297 S*LPKPSARM*KS*PWRWMGWFSGVTMLVSCRTTCTTEPNLSLYSLVAGIGCHRLWLTFC 118
Query: 186 EVKSKNTGGSAGKSSVNTPGMWW*CACSRETVSGSWNDT 302
V S TGG AGKS V TPGM *CA RE G N+T
Sbjct: 117 AV*SNCTGGLAGKSVVYTPGMS**CAWRREVALGKTNET 1
>gb|CK200003.1|CK200003 FGAS008510 Triticum aestivum FGAS: Library 3 Gate 6 Triticum
aestivum cDNA, mRNA sequence
Length = 776
Score = 147 bits (316), Expect(3) = 3e-039
Identities = 60/78 (76%), Positives = 63/78 (80%)
Frame = -1 / +3
Query: 352 PFCQGXXXXXXGASMXXVSFQLPDTVSLLQAHYHHIPGVFTDDFPALPPVFFDFTSQNVP 173
PFCQG GASM VSFQLP+TVSLLQAHYH IPGVFT+DF A PP FD+TSQNVP
Sbjct: 228 PFCQGPNNTRFGASMNNVSFQLPNTVSLLQAHYHRIPGVFTEDFXARPPXVFDYTSQNVP 407
Query: 172 RALWQPVKGTRLYRVRYG 119
RALWQPVKGTRLYRV G
Sbjct: 408 RALWQPVKGTRLYRVSTG 461
Score = 136 bits (291), Expect(2) = 1e-032
Identities = 56/77 (72%), Positives = 56/77 (72%)
Frame = +3 / -2
Query: 120 PYLTRYRRVPLTGCHSARGTFCEVKSKNTGGSAGKSSVNTPGMWW*CACSRETVSGSWND 299
P LTRY RVP TGCHSARGTFCEV SK GG A KSSV TPGM W*CA SRETV GSW D
Sbjct: 460 PVLTRYSRVPFTGCHSARGTFCEV*SKTXGGRAXKSSVKTPGMRW*CAWSRETVLGSWKD 281
Query: 300 TXXMLAPXXXXXXPWQN 350
T MLAP PWQN
Sbjct: 280 TLFMLAPNRVLLGPWQN 230
Score = 29.5 bits (58), Expect(3) = 3e-039
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = -3 / +3
Query: 95 GHGHLRRRGAPHAHP 51
GHGH RR GAP A P
Sbjct: 483 GHGHFRRGGAPLAIP 527
Score = 23.1 bits (44), Expect(2) = 1e-032
Identities = 13/28 (46%), Positives = 14/28 (50%)
Frame = +3 / -1
Query: 12 LPNPVAST*KW*PWMCMGCSSAAKMPVS 95
+P P K P G SS AKMPVS
Sbjct: 566 IPQPGGGQRKNVPGNGQGGSSPAKMPVS 483
Score = 22.6 bits (43), Expect(3) = 3e-039
Identities = 8/11 (72%), Positives = 11/11 (100%)
Frame = -1 / +2
Query: 127 RYGAVVQIVFQ 95
+YGAVVQ+VF+
Sbjct: 452 QYGAVVQMVFR 484
>gb|CD491640.1|CD491640 WHE2851_E09_I17ZT CS wheat unstressed root tip cDNA library
Triticum aestivum cDNA clone WHE2851_E09_I17, mRNA
sequence
Length = 629
Score = 159 bits (341), Expect = 1e-038
Identities = 61/64 (95%), Positives = 64/64 (100%)
Frame = -1 / -3
Query: 193 FTSQNVPRALWQPVKGTRLYRVRYGAVVQIVFQDTGIFAAEEHPMHIHGYHFYVLATGFG 14
+TSQ+VPRALWQPVKGTRLYRVRYGAVVQ+VFQDTGIFAAEEHPMHIHGYHFYVLATGFG
Sbjct: 627 YTSQSVPRALWQPVKGTRLYRVRYGAVVQMVFQDTGIFAAEEHPMHIHGYHFYVLATGFG 448
Query: 13 NYDP 2
NYDP
Sbjct: 447 NYDP 436
Score = 156 bits (336), Expect = 7e-038
Identities = 61/63 (96%), Positives = 61/63 (96%)
Frame = +3 / +2
Query: 3 GS*LPNPVAST*KW*PWMCMGCSSAAKMPVSWNTICTTAPYLTRYRRVPLTGCHSARGTF 182
GS*LPNPVAST*KW*PWMCMGCSSAAKMPVSWNTICTTAPYLTRY RVPLTGCHSARGT
Sbjct: 437 GS*LPNPVAST*KW*PWMCMGCSSAAKMPVSWNTICTTAPYLTRYSRVPLTGCHSARGTL 616
Query: 183 CEV 191
CEV
Sbjct: 617 CEV 625
Score = 131 bits (281), Expect = 3e-030
Identities = 55/64 (85%), Positives = 55/64 (85%)
Frame = -3 / -2
Query: 194 LHLAERPARAVAARQGHPPVPRQVRRRGADRVPGHGHLRRRGAPHAHPRLPLLRAGHGVR 15
LHLAERP RAVAA QGH VPRQVRRRGAD VPGHGHLR GAPHAHPRLPLLRA H VR
Sbjct: 628 LHLAERPPRAVAAGQGHAAVPRQVRRRGADGVPGHGHLRGGGAPHAHPRLPLLRARHRVR 449
Query: 14 QLRP 3
QLRP
Sbjct: 448 QLRP 437
>gb|CA620836.1|CA620836 wl1n.pk0069.g6 wl1n Triticum aestivum cDNA clone wl1n.pk0069.g6 5'
end, mRNA sequence
Length = 624
Score = 129 bits (276), Expect(2) = 4e-036
Identities = 53/84 (63%), Positives = 61/84 (72%)
Frame = -1 / +2
Query: 313 SMXXVSFQLPDTVSLLQAHYHHIPGVFTDDFPALPPVFFDFTSQNVPRALWQPVKGTRLY 134
SM VSF P T SLL AHY+ IPGVFT DFPA PPV FD+T QNV +ALWQPV T+LY
Sbjct: 2 SMNNVSFVFPQTDSLLHAHYYKIPGVFTTDFPAYPPVQFDYTGQNVSQALWQPVPATKLY 181
Query: 133 RVRYGAVVQIVFQDTGIFAAEEHP 62
+R+G+VVQ+V QDT I E P
Sbjct: 182 PLRFGSVVQLVLQDTSIVTPENTP 253
Score = 40.9 bits (83), Expect(2) = 4e-036
Identities = 13/19 (68%), Positives = 16/19 (84%)
Frame = -1 / +1
Query: 76 AEEHPMHIHGYHFYVLATG 20
A EHP+HIHGY F++LA G
Sbjct: 238 AREHPIHIHGYDFFILAXG 294
>gb|CA625498.1|CA625498 wl1n.pk0140.d11 wl1n Triticum aestivum cDNA clone wl1n.pk0140.d11
5' end, mRNA sequence
Length = 515
Score = 119 bits (255), Expect = 1e-026
Identities = 50/85 (58%), Positives = 59/85 (69%)
Frame = -1 / +2
Query: 316 ASMXXVSFQLPDTVSLLQAHYHHIPGVFTDDFPALPPVFFDFTSQNVPRALWQPVKGTRL 137
ASM VSF P T SLL AHY PGVFT DFPA PPV FD+T+ NV +ALWQPV T+L
Sbjct: 170 ASMNNVSFVFPRTDSLLHAHYFKTPGVFTTDFPAHPPVQFDYTAXNVSQALWQPVPATKL 349
Query: 136 YRVRYGAVVQIVFQDTGIFAAEEHP 62
Y +R+G+VVQ+V D I E +P
Sbjct: 350 YPLRFGSVVQLVLXDNSIVTPENNP 424
>gb|CD909804.1|CD909804 G468.113J06F010821 G468 Triticum aestivum cDNA clone G468113J06,
mRNA sequence
Length = 589
Score = 100 bits (212), Expect = 9e-021
Identities = 40/53 (75%), Positives = 42/53 (79%)
Frame = -1 / +1
Query: 352 PFCQGXXXXXXGASMXXVSFQLPDTVSLLQAHYHHIPGVFTDDFPALPPVFFD 194
PFCQG GASM VSFQLP+TVSLLQAHYH IPGVFT+DFPA PPV FD
Sbjct: 430 PFCQGPNNTRFGASMNNVSFQLPNTVSLLQAHYHRIPGVFTEDFPARPPVVFD 588
Database: Triticum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 3:01 PM
Number of letters in database: 367,240,239
Number of sequences in database: 636,343
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 284,328,158
Number of Sequences: 636343
Number of extensions: 4974402
Number of successful extensions: 540167
Number of sequences better than 1.0e-020: 19
length of database: 122,413,413
effective HSP length: 51
effective length of database: 89,959,920
effective search space used: 5847394800
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)