TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= L20621.2.1
(1220 letters)
Database: Triticum_nucl_with_EST.fasta
636,343 sequences; 367,240,239 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BJ248602.1|BJ248602 BJ248602 Y. Ogihara unpublished cDNA... 122 7e-055
gb|BQ606611.1|BQ606611 BRY_2476 wheat EST endosperm library... 123 6e-052
gb|CD871730.1|CD871730 AZO2.118O23F010213 AZO2 Triticum aes... 105 8e-051
gb|BJ254819.1|BJ254819 BJ254819 Y. Ogihara unpublished cDNA... 122 5e-045
gb|BE414217.1|BE414217 SCU007.E04.R990714 ITEC SCU Wheat En... 68 6e-044
gb|CD926685.1|CD926685 GR45.001M10F001019 GR45 Triticum aes... 96 2e-041
gb|BQ743557.1|BQ743557 WHE4105_D07_G13ZS Wheat salt-stresse... 127 8e-037
gb|CV765356.1|CV765356 FGAS059741 Triticum aestivum FGAS: L... 86 1e-032
gb|CD894235.1|CD894235 G118.125L23F010829 G118 Triticum aes... 82 1e-030
gb|BE585690.1|BE585690 EST2-3_E03_2D12t7_019 KSU wheat Fusa... 78 2e-030
gb|CK206078.1|CK206078 FGAS017654 Triticum aestivum FGAS: L... 66 5e-030
gb|CV768878.1|CV768878 FGAS063269 Triticum aestivum FGAS: L... 66 9e-026
gb|CN012934.1|CN012934 WHE3954_F12_L24ZS Wheat Fusarium gra... 79 2e-025
gb|BQ483101.1|BQ483101 WHE0495_F07_K13ZY Wheat Fusarium gra... 79 5e-025
gb|CN009837.1|CN009837 WHE3863_D01_G01ZS Wheat Fusarium gra... 56 2e-024
gb|CV779293.1|CV779293 FGAS073702 Triticum aestivum FGAS: L... 83 7e-024
gb|CA742061.1|CA742061 wet1c.pk001.j21 wet1c Triticum aesti... 68 1e-021
>gb|BJ248602.1|BJ248602 BJ248602 Y. Ogihara unpublished cDNA library, Wh_f Triticum aestivum
cDNA clone whf7c11 5', mRNA sequence
Length = 609
Score = 122 bits (260), Expect(2) = 7e-055
Identities = 53/64 (82%), Positives = 59/64 (92%)
Frame = +3 / +2
Query: 906 SDQEVEKMEEVVRGLATLKGPTLRPRDIAEAVLFLASDEARYISGHNLVVDGGVTTSRNL 1085
S +EVEK EE+VRG+ATLKGPTLR DIAEA LFLAS+E+RYISGHNLVVDGGVTTSRN+
Sbjct: 221 SAEEVEKTEEMVRGMATLKGPTLRAGDIAEAALFLASEESRYISGHNLVVDGGVTTSRNV 400
Query: 1086 IGL* 1097
IGL*
Sbjct: 401 IGL* 412
Score = 114 bits (243), Expect(2) = 7e-055
Identities = 43/50 (86%), Positives = 46/50 (92%)
Frame = +3 / +2
Query: 696 PHAYTASKHAIVGLTKNAACELRAHGVRVNCVSPFGVATPMLINAWRQGH 845
PHAYTASKHA+VGLTKNAACEL HG+RVNCVSPFGVAT ML+NAWR GH
Sbjct: 29 PHAYTASKHALVGLTKNAACELGEHGIRVNCVSPFGVATSMLVNAWRHGH 178
Score = 106 bits (226), Expect(2) = 8e-047
Identities = 48/68 (70%), Positives = 54/68 (79%)
Frame = -2 / -1
Query: 1108 LTLIHKPMRFLDVVTPPSTTRLWPDIYLASSLARKSTASAMSLGLSVGPLSVARPLTTSS 929
LT+ H PM FL+VVTPPSTTRL P++YL SSLAR S ASAMS LSVGP SVA P T SS
Sbjct: 423 LTIHHSPMTFLEVVTPPSTTRLCPEMYLDSSLARNSAASAMSPALSVGPFSVAMPRTISS 244
Query: 928 IFSTSWSL 905
+FSTS +L
Sbjct: 243 VFSTSSAL 220
Score = 102 bits (218), Expect(2) = 8e-047
Identities = 40/55 (72%), Positives = 44/55 (80%)
Frame = -2 / -1
Query: 844 WPWRQALMSMGVATPKGETQLTRTPCARSSQAAFLVSPTMACLEAV*ACGPRPPS 680
WPWR A S+ VATPKG+TQ TR PC+ SSQAAFLVSPT AC +AV ACGP PPS
Sbjct: 177 WPWRHAFTSIDVATPKGDTQFTRMPCSPSSQAAFLVSPTSACFDAVYACGPIPPS 13
>gb|BQ606611.1|BQ606611 BRY_2476 wheat EST endosperm library Triticum aestivum cDNA 5',
mRNA sequence
Length = 562
Score = 123 bits (264), Expect(3) = 3e-045
Identities = 50/66 (75%), Positives = 56/66 (84%)
Frame = -2 / -2
Query: 841 PWRQALMSMGVATPKGETQLTRTPCARSSQAAFLVSPTMACLEAV*ACGPRPPSTAATLA 662
PWR AL S+GVATPKG+TQ TR PC+ SSQAAFLVSPT AC +AV ACGP PPST ATLA
Sbjct: 543 PWRHALTSIGVATPKGDTQFTRIPCSPSSQAAFLVSPTSACFDAVYACGPIPPSTPATLA 364
Query: 661 TETMLP 644
T+TM+P
Sbjct: 363 TDTMVP 346
Score = 114 bits (243), Expect(4) = 6e-052
Identities = 43/49 (87%), Positives = 46/49 (93%)
Frame = +3 / +2
Query: 696 PHAYTASKHAIVGLTKNAACELRAHGVRVNCVSPFGVATPMLINAWRQG 842
PHAYTASKHA+VGLTKNAACEL HG+RVNCVSPFGVATPML+NAWR G
Sbjct: 398 PHAYTASKHALVGLTKNAACELGEHGIRVNCVSPFGVATPMLVNAWRHG 544
Score = 68.0 bits (142), Expect(4) = 6e-052
Identities = 30/35 (85%), Positives = 30/35 (85%)
Frame = +3 / +2
Query: 537 ILSFDAAEFDRVLRVNALGAALGMKHAARAMAPRR 641
I S DAAEFDRVLRVN LGAALGMKHAARAM RR
Sbjct: 224 IASLDAAEFDRVLRVNTLGAALGMKHAARAMLQRR 328
Score = 67.0 bits (140), Expect(3) = 3e-045
Identities = 28/37 (75%), Positives = 31/37 (83%)
Frame = -2 / -2
Query: 646 PARRGAMARAACFIPSAAPSALTRSTRSNSAASKDRM 536
P RR +MARAACF+P AAPS TRSTRSNSAAS+D M
Sbjct: 333 PPRRWSMARAACFMPRAAPSVFTRSTRSNSAASRDAM 223
Score = 40.9 bits (83), Expect(4) = 6e-052
Identities = 17/29 (58%), Positives = 20/29 (68%)
Frame = +3 / +2
Query: 384 GPQVSFVRCDVSVEDDVRRAVDWALSRHG 470
G S+V CDVSVE DV RAV ++RHG
Sbjct: 56 GACCSYVHCDVSVEADVERAVGCCVARHG 142
Score = 39.6 bits (80), Expect(4) = 6e-052
Identities = 16/20 (80%), Positives = 16/20 (80%)
Frame = +3 / +2
Query: 471 GRLDVYCNNAGVLGRQTRAA 530
GRLDV CNNAGVLGRQ A
Sbjct: 140 GRLDVLCNNAGVLGRQAPPA 199
Score = 31.3 bits (62), Expect(3) = 3e-045
Identities = 15/22 (68%), Positives = 15/22 (68%)
Frame = -2 / -2
Query: 535 LLAARVWRPSTPALLQ*TSRRP 470
L A RPSTPALLQ TS RP
Sbjct: 204 LPAGGACRPSTPALLQRTSSRP 139
>gb|CD871730.1|CD871730 AZO2.118O23F010213 AZO2 Triticum aestivum cDNA clone AZO2118O23,
mRNA sequence
Length = 721
Score = 105 bits (224), Expect(5) = 8e-051
Identities = 46/98 (46%), Positives = 55/98 (56%)
Frame = +3 / -3
Query: 525 AARSILSFDAAEFDRVLRVNALGAALGMKHAARAMAPRRXXXXXXXXXXXXXXXXXXPHA 704
A SI +F+RVL VN +G LG KHAAR M P R HA
Sbjct: 485 ACHSIRDSTKEDFERVLAVNLVGPFLGTKHAARVMVPARQGCIIGTSSLASAVGGVASHA 306
Query: 705 YTASKHAIVGLTKNAACELRAHGVRVNCVSPFGVATPM 818
YT +K A+VGLT+NAA EL HG+RVNC+SP ATP+
Sbjct: 305 YTCAKRALVGLTENAATELGQHGIRVNCISPAAAATPL 192
Score = 103 bits (219), Expect(3) = 9e-032
Identities = 50/97 (51%), Positives = 56/97 (57%)
Frame = -2 / +1
Query: 823 MSMGVATPKGETQLTRTPCARSSQAAFLVSPTMACLEAV*ACGPRPPSTAATLATETMLP 644
++ GVA GE QLTR PC SS AAF VSPT A L V AC PP+ A L M P
Sbjct: 187 VASGVAAAAGEMQLTRIPCWPSSVAAFSVSPTRARLAHVYACDATPPTADARLDVPMMQP 366
Query: 643 ARRGAMARAACFIPSAAPSALTRSTRSNSAASKDRML 533
R G M RAAC +P P+ LT STRS S+ RML
Sbjct: 367 CRAGTMTRAACLVPRKGPTRLTASTRSKSSLVLSRML 477
Score = 73.9 bits (155), Expect(5) = 8e-051
Identities = 30/52 (57%), Positives = 38/52 (73%)
Frame = +3 / -3
Query: 921 EKMEEVVRGLATLKGPTLRPRDIAEAVLFLASDEARYISGHNLVVDGGVTTS 1076
E E + A LKG LR +DIA AVLFLA D+ARY+SGHNL++DGG++ S
Sbjct: 164 EAFEMAMESFANLKGVGLRVKDIAAAVLFLACDDARYVSGHNLLIDGGISVS 9
Score = 49.6 bits (102), Expect(3) = 9e-032
Identities = 24/39 (61%), Positives = 28/39 (71%)
Frame = -2 / +1
Query: 1063 PPSTTRLWPDIYLASSLARKSTASAMSLGLSVGPLSVAR 947
PPS +RLWP ASS ARKSTA+AMSL S PL +A+
Sbjct: 22 PPSMSRLWPLT*RASSQARKSTAAAMSLTRSPTPLRLAK 138
Score = 36.3 bits (73), Expect(5) = 8e-051
Identities = 14/25 (56%), Positives = 19/25 (76%)
Frame = +3 / -3
Query: 396 SFVRCDVSVEDDVRRAVDWALSRHG 470
S+VRCDV+ E+DV AVD ++R G
Sbjct: 602 SYVRCDVTKEEDVAAAVDHTVARFG 528
Score = 36.3 bits (73), Expect(5) = 8e-051
Identities = 17/39 (43%), Positives = 19/39 (48%)
Frame = +3 / -3
Query: 282 GIGEAIVRLFAKHGARXXXXXXXXXXGEALASALGPQVS 398
GIGE RLF +HGA G L + LGP S
Sbjct: 719 GIGECTARLFVQHGASVVLATXQDDLGARLCAELGPAAS 603
Score = 28.6 bits (56), Expect(3) = 9e-032
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = -2 / +1
Query: 334 TTRAPCLANSRTMASPIP 281
TT APC N R + SP+P
Sbjct: 667 TTLAPCCTNXRAVHSPMP 720
Score = 24.4 bits (47), Expect(5) = 8e-051
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = +3 / -3
Query: 471 GRLDVYCNNAGVLGRQTRAAR 533
G+LD+ NNAG+ G + R
Sbjct: 530 GKLDIMFNNAGIGGAACHSIR 468
>gb|BJ254819.1|BJ254819 BJ254819 Y. Ogihara unpublished cDNA library, Wh_f Triticum aestivum
cDNA clone whf7c11 3', mRNA sequence
Length = 576
Score = 122 bits (260), Expect(2) = 5e-045
Identities = 53/64 (82%), Positives = 59/64 (92%)
Frame = +3 / -2
Query: 906 SDQEVEKMEEVVRGLATLKGPTLRPRDIAEAVLFLASDEARYISGHNLVVDGGVTTSRNL 1085
S +EVEK EE+VRG+ATLKGPTLR DIAEA LFLAS+E+RYISGHNLVVDGGVTTSRN+
Sbjct: 425 SAEEVEKTEEMVRGMATLKGPTLRAGDIAEAALFLASEESRYISGHNLVVDGGVTTSRNV 246
Query: 1086 IGL* 1097
IGL*
Sbjct: 245 IGL* 234
Score = 106 bits (226), Expect(2) = 1e-036
Identities = 48/68 (70%), Positives = 54/68 (79%)
Frame = -2 / +1
Query: 1108 LTLIHKPMRFLDVVTPPSTTRLWPDIYLASSLARKSTASAMSLGLSVGPLSVARPLTTSS 929
LT+ H PM FL+VVTPPSTTRL P++YL SSLAR S ASAMS LSVGP SVA P T SS
Sbjct: 223 LTIHHSPMTFLEVVTPPSTTRLCPEMYLDSSLARNSAASAMSPALSVGPFSVAMPRTISS 402
Query: 928 IFSTSWSL 905
+FSTS +L
Sbjct: 403 VFSTSSAL 426
Score = 81.3 bits (171), Expect(2) = 5e-045
Identities = 30/36 (83%), Positives = 32/36 (88%)
Frame = +3 / -2
Query: 738 TKNAACELRAHGVRVNCVSPFGVATPMLINAWRQGH 845
TKNAACEL HG+RVNCVSPFGVAT ML+NAWR GH
Sbjct: 575 TKNAACELGEHGIRVNCVSPFGVATSMLVNAWRHGH 468
Score = 68.4 bits (143), Expect(2) = 1e-036
Identities = 26/36 (72%), Positives = 29/36 (80%)
Frame = -2 / +1
Query: 844 WPWRQALMSMGVATPKGETQLTRTPCARSSQAAFLV 737
WPWR A S+ VATPKG+TQ TR PC+ SSQAAFLV
Sbjct: 469 WPWRHAFTSIDVATPKGDTQFTRMPCSPSSQAAFLV 576
>gb|BE414217.1|BE414217 SCU007.E04.R990714 ITEC SCU Wheat Endosperm Library Triticum
aestivum cDNA clone SCU007.E04, mRNA sequence
Length = 682
Score = 68.4 bits (143), Expect(5) = 1e-036
Identities = 28/36 (77%), Positives = 31/36 (86%)
Frame = -2 / -3
Query: 751 AAFLVSPTMACLEAV*ACGPRPPSTAATLATETMLP 644
AAFLVSPT AC +AV ACGP PPST ATLAT+TM+P
Sbjct: 575 AAFLVSPTSACFDAVYACGPIPPSTPATLATDTMVP 468
Score = 68.0 bits (142), Expect(6) = 6e-044
Identities = 30/35 (85%), Positives = 30/35 (85%)
Frame = +3 / +1
Query: 537 ILSFDAAEFDRVLRVNALGAALGMKHAARAMAPRR 641
I S DAAEFDRVLRVN LGAALGMKHAARAM RR
Sbjct: 346 IASLDAAEFDRVLRVNTLGAALGMKHAARAMLQRR 450
Score = 67.0 bits (140), Expect(5) = 1e-036
Identities = 28/37 (75%), Positives = 31/37 (83%)
Frame = -2 / -3
Query: 646 PARRGAMARAACFIPSAAPSALTRSTRSNSAASKDRM 536
P RR +MARAACF+P AAPS TRSTRSNSAAS+D M
Sbjct: 455 PPRRWSMARAACFMPRAAPSVFTRSTRSNSAASRDAM 345
Score = 46.9 bits (96), Expect(6) = 6e-044
Identities = 18/19 (94%), Positives = 19/19 (100%)
Frame = +3 / +1
Query: 696 PHAYTASKHAIVGLTKNAA 752
PHAYTASKHA+VGLTKNAA
Sbjct: 520 PHAYTASKHALVGLTKNAA 576
Score = 40.9 bits (83), Expect(6) = 6e-044
Identities = 17/29 (58%), Positives = 20/29 (68%)
Frame = +3 / +1
Query: 384 GPQVSFVRCDVSVEDDVRRAVDWALSRHG 470
G S+V CDVSVE DV RAV ++RHG
Sbjct: 178 GACCSYVHCDVSVEADVERAVGCCVARHG 264
Score = 40.0 bits (81), Expect(6) = 6e-044
Identities = 14/23 (60%), Positives = 16/23 (69%)
Frame = +3 / +3
Query: 732 GLTKNAACELRAHGVRVNCVSPF 800
G + CEL HG+RVNCVSPF
Sbjct: 555 GADQERGCELGEHGIRVNCVSPF 623
Score = 39.6 bits (80), Expect(6) = 6e-044
Identities = 16/20 (80%), Positives = 16/20 (80%)
Frame = +3 / +1
Query: 471 GRLDVYCNNAGVLGRQTRAA 530
GRLDV CNNAGVLGRQ A
Sbjct: 262 GRLDVLCNNAGVLGRQAPPA 321
Score = 34.5 bits (69), Expect(6) = 6e-044
Identities = 12/16 (75%), Positives = 13/16 (81%)
Frame = +3 / +2
Query: 795 PFGVATPMLINAWRQG 842
P VATPML+NAWR G
Sbjct: 617 PLRVATPMLVNAWRHG 664
Score = 31.3 bits (62), Expect(5) = 1e-036
Identities = 15/22 (68%), Positives = 15/22 (68%)
Frame = -2 / -3
Query: 535 LLAARVWRPSTPALLQ*TSRRP 470
L A RPSTPALLQ TS RP
Sbjct: 326 LPAGGACRPSTPALLQRTSSRP 261
Score = 30.4 bits (60), Expect(5) = 1e-036
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = -2 / -1
Query: 799 KGETQLTRTPCARSSQ 752
KG+TQ TR PC+ SSQ
Sbjct: 622 KGDTQFTRIPCSPSSQ 575
Score = 30.4 bits (60), Expect(5) = 1e-036
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = -2 / -2
Query: 841 PWRQALMSMGVATPKG 794
PWR AL S+GVAT +G
Sbjct: 663 PWRHALTSIGVATRRG 616
>gb|CD926685.1|CD926685 GR45.001M10F001019 GR45 Triticum aestivum cDNA clone GR45001M10,
mRNA sequence
Length = 718
Score = 96.4 bits (204), Expect(4) = 2e-041
Identities = 41/92 (44%), Positives = 53/92 (57%)
Frame = +3 / +2
Query: 537 ILSFDAAEFDRVLRVNALGAALGMKHAARAMAPRRXXXXXXXXXXXXXXXXXXPHAYTAS 716
I + D A+ +V +N G LGMKHAAR M P + PHAYTAS
Sbjct: 434 IRNLDFADVKKVFDINVHGMLLGMKHAARVMIPSKKGSIVSLASVASVIGGMGPHAYTAS 613
Query: 717 KHAIVGLTKNAACELRAHGVRVNCVSPFGVAT 812
KHA+VGLTK+ A EL +G+R+NCV+ + V T
Sbjct: 614 KHAVVGLTKSVALELLRYGIRLNCVTSYDVFT 709
Score = 92.3 bits (195), Expect(2) = 2e-027
Identities = 46/92 (50%), Positives = 54/92 (58%)
Frame = -2 / -2
Query: 811 VATPKGETQLTRTPCARSSQAAFLVSPTMACLEAV*ACGPRPPSTAATLATETMLPARRG 632
V T TQ +R P SS A LV PT AC +AV A GP PP T ATLA ET+ P G
Sbjct: 708 VNTSYDVTQFSRIPYLSSSNATLLVRPTTACFDAVYA*GPIPPMTLATLANETIDPFLLG 529
Query: 631 AMARAACFIPSAAPSALTRSTRSNSAASKDRM 536
M RAACF+PS+ P L +T SA S+ R+
Sbjct: 528 IMTRAACFMPSSMPCTLMSNTFLTSAKSRFRI 433
Score = 66.1 bits (138), Expect(4) = 2e-041
Identities = 29/60 (48%), Positives = 38/60 (63%)
Frame = +3 / +2
Query: 207 GATAVPTPMPKRLDGKVAIVTGGARGIGEAIVRLFAKHGARXXXXXXXXXXGEALASALG 386
G ++ + RL+GKVA+VTGGA GIGEAIVRLF +HGA+ G+ L +LG
Sbjct: 110 GGSSSSSTSAPRLEGKVALVTGGASGIGEAIVRLFRQHGAKVCIADVQDEAGQQLRDSLG 289
Score = 55.1 bits (114), Expect(2) = 2e-027
Identities = 22/30 (73%), Positives = 23/30 (76%)
Frame = -2 / -2
Query: 331 TRAPCLANSRTMASPIPRAPPVTMATFPSS 242
T APC RTMASPIP APPVT ATFPS+
Sbjct: 234 TLAPCCLKRRTMASPIPEAPPVTSATFPSN 145
Score = 39.6 bits (80), Expect(4) = 2e-041
Identities = 15/28 (53%), Positives = 19/28 (67%)
Frame = +3 / +2
Query: 387 PQVSFVRCDVSVEDDVRRAVDWALSRHG 470
P V FV CDV+VE+D+ RAVD + G
Sbjct: 296 PDVLFVHCDVTVEEDISRAVDATAEKFG 379
Score = 25.4 bits (49), Expect(4) = 2e-041
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = +3 / +2
Query: 471 GRLDVYCNNAGVLGRQTRAARSI 539
G LD+ NNAG+ G + R++
Sbjct: 377 GTLDIMVNNAGITGDKVTDIRNL 445
>gb|BQ743557.1|BQ743557 WHE4105_D07_G13ZS Wheat salt-stressed root cDNA library Triticum
aestivum cDNA clone WHE4105_D07_G13, mRNA sequence
Length = 511
Score = 127 bits (271), Expect(2) = 8e-037
Identities = 55/64 (85%), Positives = 60/64 (93%)
Frame = +3 / +2
Query: 906 SDQEVEKMEEVVRGLATLKGPTLRPRDIAEAVLFLASDEARYISGHNLVVDGGVTTSRNL 1085
S +EVEK EE+VRG+ATLKGPTLR RDIAEA LFLASDE+RYISGHNLVVDGGVTTSRN+
Sbjct: 104 SAEEVEKTEEMVRGMATLKGPTLRARDIAEAALFLASDESRYISGHNLVVDGGVTTSRNV 283
Query: 1086 IGL* 1097
IGL*
Sbjct: 284 IGL* 295
Score = 107 bits (228), Expect(2) = 2e-026
Identities = 48/67 (71%), Positives = 53/67 (79%)
Frame = -2 / -2
Query: 1105 TLIHKPMRFLDVVTPPSTTRLWPDIYLASSLARKSTASAMSLGLSVGPLSVARPLTTSSI 926
T H PM FL+VVTPPSTTRL P++YL SSLAR S ASAMSL L VGPLSVA P T SS+
Sbjct: 303 TFYHSPMTFLEVVTPPSTTRLCPEMYLDSSLARNSAASAMSLALRVGPLSVAMPRTISSV 124
Query: 925 FSTSWSL 905
FSTS +L
Sbjct: 123 FSTSSAL 103
Score = 48.7 bits (100), Expect(2) = 8e-037
Identities = 17/19 (89%), Positives = 18/19 (94%)
Frame = +3 / +2
Query: 786 CVSPFGVATPMLINAWRQG 842
CVSPFGVATPML+NAWR G
Sbjct: 11 CVSPFGVATPMLVNAWRHG 67
Score = 33.6 bits (67), Expect(2) = 2e-026
Identities = 14/20 (70%), Positives = 15/20 (75%)
Frame = -2 / -2
Query: 841 PWRQALMSMGVATPKGETQL 782
P R A S+GVATPKGET L
Sbjct: 66 P*RHAFTSIGVATPKGETHL 7
>gb|CV765356.1|CV765356 FGAS059741 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 809
Score = 85.8 bits (181), Expect(4) = 1e-032
Identities = 36/78 (46%), Positives = 50/78 (64%)
Frame = +3 / +1
Query: 237 KRLDGKVAIVTGGARGIGEAIVRLFAKHGARXXXXXXXXXXGEALASALGPQVSFVRCDV 416
+RL GKVA++TG ARGIG+A F ++GA+ G A+A+ LGP ++ RCDV
Sbjct: 259 QRLAGKVAVITGAARGIGKATAAEFVRNGAKVILTDIQDDLGRAVAAQLGPDAAYARCDV 438
Query: 417 SVEDDVRRAVDWALSRHG 470
+ E V AVD A++RHG
Sbjct: 439 TDEAQVAAAVDLAVARHG 492
Score = 80.3 bits (169), Expect(2) = 7e-021
Identities = 40/85 (47%), Positives = 46/85 (54%)
Frame = -2 / -1
Query: 796 GETQLTRTPCARSSQAAFLVSPTMACLEAV*ACGPRPPSTAATLATETMLPARRGAMARA 617
GE TRTP SS+A +P A LE PPST A LA + M P RRG + RA
Sbjct: 809 GEMAFTRTPWRPSSRANARTAPMTAALEMPYVGAMMPPSTPAVLAVQMMHPLRRGTITRA 630
Query: 616 ACFIPSAAPSALTRSTRSNSAASKD 542
AC IP+ A AL RS SA S+D
Sbjct: 629 ACLIPATADRALVAMVRSKSARSRD 555
Score = 49.6 bits (102), Expect(4) = 1e-032
Identities = 20/36 (55%), Positives = 24/36 (66%)
Frame = +3 / +1
Query: 534 SILSFDAAEFDRVLRVNALGAALGMKHAARAMAPRR 641
S+ S D A+FDR + NA A G+KHAAR M PRR
Sbjct: 547 SVGSLDLADFDRTMATNARSAVAGIKHAARVMVPRR 654
Score = 41.8 bits (85), Expect(2) = 7e-021
Identities = 21/77 (27%), Positives = 25/77 (32%)
Frame = -2 / -1
Query: 469 PWXXXXXXXXXXXXXXXXXXXXTKLTCGPXXXXXXXXXXXXXXAITTRAPCLANSRTMAS 290
PW GP T AP L NS +A
Sbjct: 491 PWRATARSTAAATCASSVTSQRA*AASGPSWAATARPRSSWMSVRMTLAPFLTNSAAVAL 312
Query: 289 PIPRAPPVTMATFPSSL 239
P+P A PV ATFP++L
Sbjct: 311 PMPLAAPVITATFPANL 261
Score = 35.4 bits (71), Expect(4) = 1e-032
Identities = 15/30 (50%), Positives = 19/30 (63%)
Frame = +3 / +1
Query: 705 YTASKHAIVGLTKNAACELRAHGVRVNCVS 794
Y SK A++G + A EL HGVRVN +S
Sbjct: 718 YGISKAAVIGAVRAFARELGRHGVRVNAIS 807
Score = 26.3 bits (51), Expect(4) = 1e-032
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = +3 / +1
Query: 471 GRLDVYCNNAGVLGR 515
GRLD+ N+AGV GR
Sbjct: 490 GRLDIMHNHAGVTGR 534
>gb|CD894235.1|CD894235 G118.125L23F010829 G118 Triticum aestivum cDNA clone G118125L23,
mRNA sequence
Length = 750
Score = 82.2 bits (173), Expect(4) = 1e-030
Identities = 34/77 (44%), Positives = 48/77 (62%)
Frame = +3 / +1
Query: 240 RLDGKVAIVTGGARGIGEAIVRLFAKHGARXXXXXXXXXXGEALASALGPQVSFVRCDVS 419
RL GKVA++TG A G+G+A F ++GA+ G A+A+ LGP S+ RCDV+
Sbjct: 106 RLAGKVAVITGAASGMGKATATEFVRNGAKVILTDIQDDLGHAVAAELGPDASYARCDVT 285
Query: 420 VEDDVRRAVDWALSRHG 470
E + AVD A++RHG
Sbjct: 286 DEAQIAAAVDLAVARHG 336
Score = 49.2 bits (101), Expect(4) = 1e-030
Identities = 19/36 (52%), Positives = 23/36 (63%)
Frame = +3 / +1
Query: 534 SILSFDAAEFDRVLRVNALGAALGMKHAARAMAPRR 641
S+ S D A+FDR + N A G+KHAAR M PRR
Sbjct: 391 SVASLDLADFDRTMAANVRSAVAGIKHAARVMVPRR 498
Score = 31.8 bits (63), Expect(4) = 1e-030
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = +3 / +3
Query: 756 ELRAHGVRVNCVSPFGVATP 815
EL GVRVN +SP +ATP
Sbjct: 612 ELGRQGVRVNAISPHAIATP 671
Score = 27.2 bits (53), Expect(4) = 1e-030
Identities = 11/17 (64%), Positives = 13/17 (76%)
Frame = +3 / +1
Query: 471 GRLDVYCNNAGVLGRQT 521
GRLDV N+AGV GR +
Sbjct: 334 GRLDVLHNHAGVTGRMS 384
>gb|BE585690.1|BE585690 EST2-3_E03_2D12t7_019 KSU wheat Fusarium graminearum infected spike
cDNA library Triticum aestivum cDNA clone
EST2-3_E03_2D12t7_019, mRNA sequence
Length = 673
Score = 78.0 bits (164), Expect(2) = 3e-023
Identities = 36/71 (50%), Positives = 45/71 (63%)
Frame = -2 / -3
Query: 748 AFLVSPTMACLEAV*ACGPRPPSTAATLATETMLPARRGAMARAACFIPSAAPSALTRST 569
+ LVSP++AC V A GP PP T ATLA ET+ P G M RAACF+PS+ P L +T
Sbjct: 671 SLLVSPSLACFPPVYASGPIPPMTLATLANETIDPFLLGIMTRAACFMPSSIPCTLMSNT 492
Query: 568 RSNSAASKDRM 536
SA S+ R+
Sbjct: 491 FLTSAKSRFRI 459
Score = 66.1 bits (138), Expect(4) = 2e-030
Identities = 29/60 (48%), Positives = 38/60 (63%)
Frame = +3 / +1
Query: 207 GATAVPTPMPKRLDGKVAIVTGGARGIGEAIVRLFAKHGARXXXXXXXXXXGEALASALG 386
G ++ + RL+GKVA+VTGGA GIGEAIVRLF +HGA+ G+ L +LG
Sbjct: 136 GGSSSSSTSAPRLEGKVALVTGGASGIGEAIVRLFRQHGAKVCIADVQDEAGQQLRDSLG 315
Score = 58.3 bits (121), Expect(4) = 2e-030
Identities = 27/70 (38%), Positives = 33/70 (47%)
Frame = +3 / +1
Query: 537 ILSFDAAEFDRVLRVNALGAALGMKHAARAMAPRRXXXXXXXXXXXXXXXXXXPHAYTAS 716
I + D A+ +V +N G LGMKHAAR M P + P AYT
Sbjct: 460 IRNLDFADVKKVFDINVHGMLLGMKHAARVMIPSKKGSIVSLASVASVIGGMGPDAYTGG 639
Query: 717 KHAIVGLTKN 746
KHA GLTK+
Sbjct: 640 KHAREGLTKS 669
Score = 55.1 bits (114), Expect(2) = 3e-023
Identities = 22/30 (73%), Positives = 23/30 (76%)
Frame = -2 / -3
Query: 331 TRAPCLANSRTMASPIPRAPPVTMATFPSS 242
T APC RTMASPIP APPVT ATFPS+
Sbjct: 260 TLAPCCLKRRTMASPIPEAPPVTSATFPSN 171
Score = 39.6 bits (80), Expect(4) = 2e-030
Identities = 15/28 (53%), Positives = 19/28 (67%)
Frame = +3 / +1
Query: 387 PQVSFVRCDVSVEDDVRRAVDWALSRHG 470
P V FV CDV+VE+D+ RAVD + G
Sbjct: 322 PDVLFVHCDVTVEEDISRAVDATAEKFG 405
Score = 25.4 bits (49), Expect(4) = 2e-030
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = +3 / +1
Query: 471 GRLDVYCNNAGVLGRQTRAARSI 539
G LD+ NNAG+ G + R++
Sbjct: 403 GTLDIMVNNAGITGDKVTDIRNL 471
>gb|CK206078.1|CK206078 FGAS017654 Triticum aestivum FGAS: Library 5 GATE 7 Triticum aestivum
cDNA, mRNA sequence
Length = 1147
Score = 65.7 bits (137), Expect(4) = 5e-030
Identities = 27/60 (45%), Positives = 36/60 (60%)
Frame = +3 / +1
Query: 900 VPSDQEVEKMEEVVRGLATLKGPTLRPRDIAEAVLFLASDEARYISGHNLVVDGGVTTSR 1079
+P E E V + + G L DIA A ++LASDEA+Y++GHNLVVDGG T +
Sbjct: 430 LPETSEEELRRMVATAMNEMGGSVLEVEDIARAAVYLASDEAKYVNGHNLVVDGGFTVGK 609
Score = 49.2 bits (101), Expect(4) = 5e-030
Identities = 19/36 (52%), Positives = 23/36 (63%)
Frame = +3 / +1
Query: 534 SILSFDAAEFDRVLRVNALGAALGMKHAARAMAPRR 641
S+ S D A+FDR + N A G+KHAAR M PRR
Sbjct: 121 SVASLDLADFDRTMAANVRSAVAGIKHAARVMVPRR 228
Score = 46.0 bits (94), Expect(4) = 5e-030
Identities = 19/38 (50%), Positives = 24/38 (63%)
Frame = +3 / +1
Query: 702 AYTASKHAIVGLTKNAACELRAHGVRVNCVSPFGVATP 815
AY SK A++G + A EL GVRVN +SP +ATP
Sbjct: 289 AYCISKAAVIGAVRALAGELGRQGVRVNAISPHAIATP 402
Score = 27.2 bits (53), Expect(4) = 5e-030
Identities = 11/17 (64%), Positives = 13/17 (76%)
Frame = +3 / +1
Query: 471 GRLDVYCNNAGVLGRQT 521
GRLDV N+AGV GR +
Sbjct: 64 GRLDVLHNHAGVTGRMS 114
>gb|CV768878.1|CV768878 FGAS063269 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 835
Score = 65.7 bits (137), Expect(3) = 9e-026
Identities = 32/97 (32%), Positives = 45/97 (46%)
Frame = +3 / +1
Query: 525 AARSILSFDAAEFDRVLRVNALGAALGMKHAARAMAPRRXXXXXXXXXXXXXXXXXXPHA 704
A + D +FD V+ +NA G G+KHAAR MAPRR H
Sbjct: 514 ARPQLSDLDLNDFDAVMAINARGVMAGVKHAARVMAPRRSGSIICMASVARVLGSVTSHP 693
Query: 705 YTASKHAIVGLTKNAACELRAHGVRVNCVSPFGVATP 815
Y+ S+ A++G+ + A ++ GV N SP TP
Sbjct: 694 YSVSQAAVLGIVRAWAGKMAPSGVGGNPFSPNFFPTP 804
Score = 57.0 bits (118), Expect(3) = 9e-026
Identities = 24/54 (44%), Positives = 33/54 (61%)
Frame = +3 / +1
Query: 237 KRLDGKVAIVTGGARGIGEAIVRLFAKHGARXXXXXXXXXXGEALASALGPQVS 398
+RL GKVA++TGGA GIG+A F ++GA+ G ALA+ LGP +
Sbjct: 232 QRLAGKVAVITGGASGIGKATAEEFVRNGAKVVLADVQDDLGRALATELGPDAA 393
Score = 33.6 bits (67), Expect(3) = 9e-026
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = +3 / +1
Query: 399 FVRCDVSVEDDVRRAVDWALSRHG 470
+ RCDV+ E V AVD A++RHG
Sbjct: 397 YTRCDVTDEAQVAAAVDLAVARHG 468
>gb|CN012934.1|CN012934 WHE3954_F12_L24ZS Wheat Fusarium graminearum infected spike cDNA
library Triticum aestivum cDNA clone WHE3954_F12_L24,
mRNA sequence
Length = 557
Score = 78.5 bits (165), Expect(3) = 2e-023
Identities = 34/65 (52%), Positives = 42/65 (64%)
Frame = -2 / -3
Query: 736 SPTMACLEAV*ACGPRPPSTAATLATETMLPARRGAMARAACFIPSAAPSALTRSTRSNS 557
SP+ A L+ + CG PST A LA + MLP RRG M RAACF P++ ALT TRS S
Sbjct: 549 SPSTAALDTLYGCGATLPSTPAVLAVQMMLPLRRGVMTRAACFTPASMARALTAMTRSKS 370
Query: 556 AASKD 542
A S++
Sbjct: 369 AMSRE 355
Score = 67.0 bits (140), Expect(4) = 2e-025
Identities = 28/69 (40%), Positives = 36/69 (52%)
Frame = +3 / +2
Query: 537 ILSFDAAEFDRVLRVNALGAALGMKHAARAMAPRRXXXXXXXXXXXXXXXXXXPHAYTAS 716
+ S D A+FDRV+ VNA G+KHAAR M PRR PH Y+ S
Sbjct: 350 LASLDIADFDRVMAVNARAMLAGVKHAARVMTPRRRGSIICTASTAGVLGSVAPHPYSVS 529
Query: 717 KHAIVGLTK 743
K A++GL +
Sbjct: 530 KAAVLGLVR 556
Score = 46.4 bits (95), Expect(3) = 2e-023
Identities = 20/35 (57%), Positives = 24/35 (68%)
Frame = -2 / -3
Query: 334 TTRAPCLANSRTMASPIPRAPPVTMATFPSSLLGI 230
TT AP L NS +A PIP APPV MATF ++L +
Sbjct: 153 TTLAPFLTNSAAVALPIPLAPPVIMATFLTNLCAV 49
Score = 44.6 bits (91), Expect(4) = 2e-025
Identities = 20/50 (40%), Positives = 29/50 (58%)
Frame = +3 / +2
Query: 237 KRLDGKVAIVTGGARGIGEAIVRLFAKHGARXXXXXXXXXXGEALASALG 386
+RL KVA++TGGA GIG+A F ++GA+ G A+ + LG
Sbjct: 56 QRLVRKVAMITGGASGIGKATAAEFVRNGAKVVLADVQDDLGRAVVAELG 205
Score = 33.6 bits (67), Expect(4) = 2e-025
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = +3 / +2
Query: 399 FVRCDVSVEDDVRRAVDWALSRHG 470
+ RCDV+ E V AVD A++RHG
Sbjct: 221 YTRCDVADEAQVAAAVDLAVARHG 292
Score = 27.2 bits (53), Expect(4) = 2e-025
Identities = 11/17 (64%), Positives = 12/17 (70%)
Frame = +3 / +2
Query: 471 GRLDVYCNNAGVLGRQT 521
GRLDV NNAG+ G T
Sbjct: 290 GRLDVMFNNAGISGALT 340
Score = 23.5 bits (45), Expect(3) = 2e-023
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = -1 / -2
Query: 461 RQRPVHGAPDVVLHGHVAAHEA 396
R VHG ++ L GHVAA A
Sbjct: 283 RDGQVHGRGNLRLVGHVAARVA 218
>gb|BQ483101.1|BQ483101 WHE0495_F07_K13ZY Wheat Fusarium graminearum infected spike cDNA
library Triticum aestivum cDNA clone WHE0495_F07_K13,
mRNA sequence
Length = 564
Score = 78.5 bits (165), Expect(2) = 2e-021
Identities = 38/75 (50%), Positives = 43/75 (57%)
Frame = -2 / +3
Query: 823 MSMGVATPKGETQLTRTPCARSSQAAFLVSPTMACLEAV*ACGPRPPSTAATLATETMLP 644
++ GV GET LTRTP S A PT A L+ + CG P T ATLA MLP
Sbjct: 336 ITSGVGM*LGETALTRTPERAISPATARTIPTTAALDTLYGCGVTLPXTPATLAMXMMLP 515
Query: 643 ARRGAMARAACFIPS 599
RRGAM RAACF P+
Sbjct: 516 LRRGAMTRAACFTPA 560
Score = 72.5 bits (152), Expect(2) = 5e-025
Identities = 33/74 (44%), Positives = 43/74 (58%)
Frame = +3 / -3
Query: 603 GMKHAARAMAPRRXXXXXXXXXXXXXXXXXXPHAYTASKHAIVGLTKNAACELRAHGVRV 782
G+KHAAR MAPRR PH Y+ SK A+VG+ + A E+ GVRV
Sbjct: 556 GVKHAARVMAPRRSGSIXCMASVAGVXGSVTPHPYSVSKAAVVGIVRAVAGEMARSGVRV 377
Query: 783 NCVSPFGVATPMLI 824
N VSP + TP+++
Sbjct: 376 NAVSPNYIPTPLVM 335
Score = 66.1 bits (138), Expect(2) = 5e-025
Identities = 25/41 (60%), Positives = 32/41 (78%)
Frame = +3 / -3
Query: 957 LKGPTLRPRDIAEAVLFLASDEARYISGHNLVVDGGVTTSR 1079
++G L P DIA A L+LASDEA+Y++GHNLVVDGG T +
Sbjct: 259 MEGAVLEPDDIARAALYLASDEAKYVNGHNLVVDGGFTVGK 137
Score = 48.3 bits (99), Expect(2) = 2e-021
Identities = 24/36 (66%), Positives = 24/36 (66%)
Frame = -2 / +3
Query: 1069 VTPPSTTRLWPDIYLASSLARKSTASAMSLGLSVGP 962
V PPSTTRL P YLASS AR S A AMS G S P
Sbjct: 147 VNPPSTTRLCPLTYLASSDARYSAALAMSSGSSTAP 254
>gb|CN009837.1|CN009837 WHE3863_D01_G01ZS Wheat Fusarium graminearum infected spike cDNA
library Triticum aestivum cDNA clone WHE3863_D01_G01,
mRNA sequence
Length = 613
Score = 55.6 bits (115), Expect(4) = 2e-024
Identities = 23/54 (42%), Positives = 33/54 (61%)
Frame = +3 / +3
Query: 237 KRLDGKVAIVTGGARGIGEAIVRLFAKHGARXXXXXXXXXXGEALASALGPQVS 398
+RL GKVA++TGGA GIG+A F ++GA+ G A+A+ LGP +
Sbjct: 141 QRLAGKVAVITGGASGIGKATAEEFVRNGAKVVLADVQDDLGRAVAAELGPDAA 302
Score = 53.8 bits (111), Expect(4) = 2e-024
Identities = 22/54 (40%), Positives = 27/54 (50%)
Frame = +3 / +3
Query: 549 DAAEFDRVLRVNALGAALGMKHAARAMAPRRXXXXXXXXXXXXXXXXXXPHAYT 710
D A+FD V+ +NA G G+KHAAR MAPRR PH Y+
Sbjct: 447 DLADFDAVMAINARGVLAGVKHAARVMAPRRSGSIICMASVAGVLGSVTPHPYS 608
Score = 31.8 bits (63), Expect(4) = 2e-024
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +3 / +3
Query: 399 FVRCDVSVEDDVRRAVDWALSRHG 470
+ CDV+ E V AVD A++RHG
Sbjct: 306 YTHCDVTEEAQVAAAVDLAVARHG 377
Score = 27.6 bits (54), Expect(4) = 2e-024
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +3 / +3
Query: 471 GRLDVYCNNAGVLGRQTRAARSIL 542
G+LD+ NNAG++G R S L
Sbjct: 375 GKLDIMLNNAGIVGSLARPRLSDL 446
>gb|CV779293.1|CV779293 FGAS073702 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 839
Score = 82.6 bits (174), Expect(3) = 7e-024
Identities = 37/82 (45%), Positives = 46/82 (56%)
Frame = +3 / +1
Query: 225 TPMPKRLDGKVAIVTGGARGIGEAIVRLFAKHGARXXXXXXXXXXGEALASALGPQVSFV 404
T M RL+GK A+VTGGA G+G+A F + GA G A LGPQ F+
Sbjct: 208 TAMKGRLEGKTALVTGGASGLGKATAHEFIQEGACVVLADINSQLGLQTAEELGPQAHFI 387
Query: 405 RCDVSVEDDVRRAVDWALSRHG 470
CDV +ED V AVD A++ HG
Sbjct: 388 HCDVVLEDSVAEAVDAAVAMHG 453
Score = 41.4 bits (84), Expect(3) = 7e-024
Identities = 15/31 (48%), Positives = 20/31 (64%)
Frame = +3 / +1
Query: 543 SFDAAEFDRVLRVNALGAALGMKHAARAMAP 635
+ D +FD ++RVN G G+KHA R MAP
Sbjct: 520 TLDLGQFDDIMRVNLRGTLAGIKHATRVMAP 612
Score = 25.8 bits (50), Expect(3) = 7e-024
Identities = 10/14 (71%), Positives = 12/14 (85%)
Frame = +3 / +1
Query: 471 GRLDVYCNNAGVLG 512
GRLDV N+AGV+G
Sbjct: 451 GRLDVMFNSAGVVG 492
>gb|CA742061.1|CA742061 wet1c.pk001.j21 wet1c Triticum aestivum cDNA clone wet1c.pk001.j21 5'
end, mRNA sequence
Length = 549
Score = 68.0 bits (142), Expect(2) = 1e-021
Identities = 26/41 (63%), Positives = 32/41 (78%)
Frame = +3 / +1
Query: 957 LKGPTLRPRDIAEAVLFLASDEARYISGHNLVVDGGVTTSR 1079
+KG L P DIA A L+LASDEA+Y++GHNLVVDGG T +
Sbjct: 286 MKGAVLEPDDIARAALYLASDEAKYVNGHNLVVDGGFTVGK 408
Score = 57.0 bits (118), Expect(2) = 1e-021
Identities = 25/75 (33%), Positives = 36/75 (48%)
Frame = +3 / +1
Query: 615 AARAMAPRRXXXXXXXXXXXXXXXXXXPHAYTASKHAIVGLTKNAACELRAHGVRVNCVS 794
A MAPRR PH Y+ SK A++G+ + A E+ GVRVN +S
Sbjct: 1 ARGVMAPRRSGSIICMASVAGVLGSVTPHPYSVSKTAVLGIVRAVAGEMARSGVRVNAIS 180
Query: 795 PFGVATPMLINAWRQ 839
P + TP+++ Q
Sbjct: 181 PNYIPTPLVMRILEQ 225
Database: Triticum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 3:01 PM
Number of letters in database: 367,240,239
Number of sequences in database: 636,343
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 936,876,419
Number of Sequences: 636343
Number of extensions: 16191475
Number of successful extensions: 282678
Number of sequences better than 1.0e-020: 23
length of database: 122,413,413
effective HSP length: 55
effective length of database: 87,414,548
effective search space used: 30682506348
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)