TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3748389.2.1
(663 letters)
Database: Triticum_nucl_with_EST.fasta
636,343 sequences; 367,240,239 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BJ247473.1|BJ247473 BJ247473 Y. Ogihara unpublished cDNA... 169 3e-041
gb|BJ252543.1|BJ252543 BJ252543 Y. Ogihara unpublished cDNA... 111 1e-034
gb|CV777221.1|CV777221 FGAS071626 Triticum aestivum FGAS: L... 118 1e-032
gb|CD876252.1|CD876252 AZO3.109B21R011126 AZO3 Triticum aes... 85 2e-030
gb|CD870081.1|CD870081 AZO2.113H02F001130 AZO2 Triticum aes... 95 3e-029
gb|CN013007.1|CN013007 WHE3955_F06_K11ZS Wheat Fusarium gra... 88 8e-029
gb|DR733077.1|DR733077 FGAS077332 Triticum aestivum FGAS: T... 89 2e-027
gb|BT009372.1| Triticum aestivum clone wlm96.pk028.k4:fis, ... 98 8e-027
gb|CK209010.1|CK209010 FGAS020743 Triticum aestivum FGAS: L... 91 1e-026
gb|CK216261.1|CK216261 FGAS028248 Triticum aestivum FGAS: L... 95 1e-026
gb|DR432305.1|DR432305 441E-825 Line 441 epidermal library ... 97 1e-026
gb|CD870082.1|CD870082 AZO2.113H02R010522 AZO2 Triticum aes... 118 5e-026
gb|CV779260.1|CV779260 FGAS073669 Triticum aestivum FGAS: L... 95 6e-026
gb|CV759077.1|CV759077 FGAS053459 Triticum aestivum FGAS: L... 88 1e-025
gb|CD453031.1|CD453031 WHE1452_G06_M12ZT CS wheat etiolated... 116 2e-025
gb|BJ225207.1|BJ225207 BJ225207 Y. Ogihara unpublished cDNA... 108 3e-025
gb|CD895871.1|CD895871 G174.101C21F010821 G174 Triticum aes... 86 3e-025
gb|CD937281.1|CD937281 OV.106I05F010202 OV Triticum aestivu... 88 4e-025
gb|BQ902281.1|BQ902281 Ta02_07b07_R Ta02_AAFC_ECORC_Fusariu... 88 1e-024
gb|AJ614844.1|AJ614844 AJ614844 Triticum turgidum subsp. du... 72 3e-024
gb|BJ295169.1|BJ295169 BJ295169 Y. Ogihara unpublished cDNA... 99 3e-024
gb|BQ901353.1|BQ901353 Ta02_18d02_R Ta02_AAFC_ECORC_Fusariu... 85 4e-024
gb|CK205865.1|CK205865 FGAS017415 Triticum aestivum FGAS: L... 89 6e-024
gb|CD902980.1|CD902980 G356.108L17F010918 G356 Triticum aes... 81 8e-024
gb|BJ284242.1|BJ284242 BJ284242 Y. Ogihara unpublished cDNA... 65 2e-023
gb|BE405307.1|BE405307 WHE1210_B01_C02ZS Wheat etiolated se... 82 4e-023
gb|CA732916.1|CA732916 wlp1c.pk006.g19 wlp1c Triticum aesti... 84 5e-023
gb|DR739942.1|DR739942 FGAS000208 Triticum aestivum FGAS: L... 65 5e-023
gb|BJ228434.1|BJ228434 BJ228434 Y. Ogihara unpublished cDNA... 82 8e-023
gb|BQ752990.1|BQ752990 WHE4121_F06_K11ZS Wheat salt-stresse... 89 1e-022
gb|CK211682.1|CK211682 FGAS023536 Triticum aestivum FGAS: L... 91 1e-022
gb|CK193504.1|CK193504 FGAS001918 Triticum aestivum FGAS: L... 75 2e-022
gb|CD865781.1|CD865781 AZO2.101M06F001124 AZO2 Triticum aes... 75 2e-022
gb|BQ743938.1|BQ743938 WHE4109_H10_O19ZS Wheat salt-stresse... 75 2e-022
gb|BE405606.1|BE405606 WHE1209_C09_E17ZS Wheat etiolated se... 75 2e-022
gb|BJ281677.1|BJ281677 BJ281677 Y. Ogihara unpublished cDNA... 75 2e-022
gb|CD491370.1|CD491370 WHE3085_F05_L09ZT CS wheat cold-stre... 98 2e-022
emb|AX660822.1| Sequence 1179 from Patent WO03000906 93 5e-022
gb|CD868794.1|CD868794 AZO2.109N19R010328 AZO2 Triticum aes... 75 5e-022
gb|BE585608.1|BE585608 EST#5T7_B10_b10_077 KSU wheat Fusari... 67 9e-022
gb|BM137436.1|BM137436 WHE0475_B01_C01ZS Wheat Fusarium gra... 80 4e-021
gb|CK205858.1|CK205858 FGAS017406 Triticum aestivum FGAS: L... 84 8e-021
>gb|BJ247473.1|BJ247473 BJ247473 Y. Ogihara unpublished cDNA library, Wh_f Triticum
aestivum cDNA clone whf2f18 5', mRNA sequence
Length = 544
Score = 169 bits (363), Expect = 3e-041
Identities = 72/154 (46%), Positives = 93/154 (60%)
Frame = +3 / +1
Query: 3 SVVYAAFGSEAKLTSAQLQTIALGLEASGLPFLWAFRPPADAAPGQGTGGLPEGFEERVN 182
SV+Y A GSEA LT + +ALGLE G+ F WA R PA G LP GFEER
Sbjct: 73 SVIYVALGSEAPLTLQNIHELALGLELVGVRFHWALRKPAGTGTGNDDELLPAGFEERTR 252
Query: 183 GRGLVCRGWVPQPRLLAHESVGGFLTHAGWNSIAEGLSRGVTMVLLPLMFDQGLNARLLM 362
RGLVC GWVPQ + LAH + G FLTH GW S E + G+ +V+LP + D + AR +
Sbjct: 253 LRGLVCTGWVPQVKALAHGATGAFLTHCGWGSTIESFAFGLPLVMLPFIIDTPMIARAMA 432
Query: 363 DKKIGIEVERNEDDGTFAPKDIADALRTAMAENQ 464
+ IG+EV R++ DG+F +A A R M E++
Sbjct: 433 KRGIGVEVARDDSDGSFERDGLAVAXRRVMXEDE 534
>gb|BJ252543.1|BJ252543 BJ252543 Y. Ogihara unpublished cDNA library, Wh_f Triticum
aestivum cDNA clone whf24m22 3', mRNA sequence
Length = 639
Score = 111 bits (238), Expect(2) = 1e-034
Identities = 44/104 (42%), Positives = 65/104 (62%)
Frame = +3 / -1
Query: 153 LPEGFEERVNGRGLVCRGWVPQPRLLAHESVGGFLTHAGWNSIAEGLSRGVTMVLLPLMF 332
LP GFEER+ R +VC GWVPQ ++L H + FLTH GW S E + G+ +V+LP +
Sbjct: 426 LPAGFEERMQDRRMVCTGWVPQVKVLGHGATAAFLTHCGWGSTIESFAFGLPLVMLPFLT 247
Query: 333 DQGLNARLLMDKKIGIEVERNEDDGTFAPKDIADALRTAMAENQ 464
D + AR + + IG+EV R++ DG+F +A +R M E++
Sbjct: 246 DTPMIAREMAKRGIGVEVARDDSDGSFDRDGVAVNVRHVMVEDE 115
Score = 55.6 bits (115), Expect(2) = 1e-034
Identities = 23/40 (57%), Positives = 28/40 (70%)
Frame = +3 / -1
Query: 3 SVVYAAFGSEAKLTSAQLQTIALGLEASGLPFLWAFRPPA 122
SV+Y A GSEA LT + +ALGLE +G+ FLWA R PA
Sbjct: 570 SVLYVALGSEAPLTLENIHELALGLELAGVHFLWALRKPA 451
>gb|CV777221.1|CV777221 FGAS071626 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 855
Score = 118 bits (253), Expect(2) = 1e-032
Identities = 46/104 (44%), Positives = 67/104 (64%)
Frame = +3 / -2
Query: 153 LPEGFEERVNGRGLVCRGWVPQPRLLAHESVGGFLTHAGWNSIAEGLSRGVTMVLLPLMF 332
LP GFE+R RG+VC GWVPQ ++LAH + FLTH GW S E + G+ +V+LP +
Sbjct: 629 LPAGFEKRTRARGVVCTGWVPQVKVLAHGATAAFLTHCGWGSTIESFAFGLPLVMLPFLT 450
Query: 333 DQGLNARLLMDKKIGIEVERNEDDGTFAPKDIADALRTAMAENQ 464
D + AR + + IG+EV R++ DG+F +A A+R M E++
Sbjct: 449 DTPMIARAMAKRGIGVEVARDDSDGSFDRDGVAVAVRHVMVEDE 318
Score = 41.8 bits (85), Expect(2) = 1e-032
Identities = 18/38 (47%), Positives = 24/38 (63%)
Frame = +3 / -3
Query: 9 VYAAFGSEAKLTSAQLQTIALGLEASGLPFLWAFRPPA 122
+Y A GSEA LT + +ALGLE +G+P L +P A
Sbjct: 763 LYVALGSEAPLTLENIHELALGLELAGVPSLGVRKPTA 650
>gb|CD876252.1|CD876252 AZO3.109B21R011126 AZO3 Triticum aestivum cDNA clone AZO3109B21,
mRNA sequence
Length = 700
Score = 84.9 bits (179), Expect(3) = 2e-030
Identities = 34/69 (49%), Positives = 46/69 (66%)
Frame = +3 / -2
Query: 186 RGLVCRGWVPQPRLLAHESVGGFLTHAGWNSIAEGLSRGVTMVLLPLMFDQGLNARLLMD 365
RGL+ RGW PQ R+LAH S G F++H GWNSI E L GV ++ PL +Q NA L+++
Sbjct: 333 RGLLVRGWAPQMRILAHPSTGAFMSHCGWNSILESLCHGVPVIGWPLGAEQFFNAMLVVE 154
Query: 366 KKIGIEVER 392
+ +EV R
Sbjct: 153 WGVCVEVAR 127
Score = 58.8 bits (122), Expect(3) = 2e-030
Identities = 22/39 (56%), Positives = 29/39 (74%)
Frame = +3 / -2
Query: 3 SVVYAAFGSEAKLTSAQLQTIALGLEASGLPFLWAFRPP 119
SV+Y +FGS+ + + Q+ +ALGLEASG PFLW RPP
Sbjct: 528 SVLYISFGSQNSINADQMTELALGLEASGRPFLWVLRPP 412
Score = 27.2 bits (53), Expect(3) = 2e-030
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = +3 / -2
Query: 393 NEDDGTFAPKDIADALRTAMAENQDGTRVKELAEV 497
N + A +ADA+ T M E + G ++ AEV
Sbjct: 123 NMESSVVAMGAVADAVGTVMGETEKGGEMRRKAEV 19
>gb|CD870081.1|CD870081 AZO2.113H02F001130 AZO2 Triticum aestivum cDNA clone AZO2113H02,
mRNA sequence
Length = 469
Score = 95.0 bits (201), Expect(2) = 3e-029
Identities = 38/74 (51%), Positives = 49/74 (66%)
Frame = +3 / +3
Query: 147 GGLPEGFEERVNGRGLVCRGWVPQPRLLAHESVGGFLTHAGWNSIAEGLSRGVTMVLLPL 326
G LP+GFEER GRG+V GWVPQ + LAH +V FLTH GW S E + G +V+LP
Sbjct: 216 GVLPDGFEERTRGRGMVETGWVPQVKALAHGAVAAFLTHCGWGSTVESFAFGHPLVMLPF 395
Query: 327 MFDQGLNARLLMDK 368
+ DQ L AR + ++
Sbjct: 396 VVDQPLVARTMAEE 437
Score = 54.2 bits (112), Expect(2) = 3e-029
Identities = 22/39 (56%), Positives = 27/39 (69%)
Frame = +3 / +3
Query: 3 SVVYAAFGSEAKLTSAQLQTIALGLEASGLPFLWAFRPP 119
SV+Y A GSEA +T L +ALGLE +G+ FLWA R P
Sbjct: 60 SVIYVALGSEAPVTLKNLHELALGLELAGVRFLWALRSP 176
>gb|CN013007.1|CN013007 WHE3955_F06_K11ZS Wheat Fusarium graminearum infected spike cDNA
library Triticum aestivum cDNA clone WHE3955_F06_K11,
mRNA sequence
Length = 768
Score = 87.7 bits (185), Expect(2) = 8e-029
Identities = 34/70 (48%), Positives = 46/70 (65%)
Frame = +3 / +3
Query: 156 PEGFEERVNGRGLVCRGWVPQPRLLAHESVGGFLTHAGWNSIAEGLSRGVTMVLLPLMFD 335
P+G+E+RV RG++ R W +LAH +VG FLTH GWNSI E ++ GV M+ P D
Sbjct: 435 PKGWEKRVEDRGVIIRSWAQTTAILAHPAVGTFLTHCGWNSILEAVAAGVPMLTWPKFHD 614
Query: 336 QGLNARLLMD 365
Q +N RL+ D
Sbjct: 615 QFVNERLIND 644
Score = 60.2 bits (125), Expect(2) = 8e-029
Identities = 27/47 (57%), Positives = 32/47 (68%)
Frame = +3 / +3
Query: 3 SVVYAAFGSEAKLTSAQLQTIALGLEASGLPFLWAFRPPADAAPGQG 143
SVVY +FGS A ++ AQL +ALGLEASG PFLWA R P +G
Sbjct: 303 SVVYVSFGSCALVSHAQLDQLALGLEASGKPFLWAVRAAEKWTPPKG 443
>gb|DR733077.1|DR733077 FGAS077332 Triticum aestivum FGAS: TaLt7 Triticum aestivum cDNA,
mRNA sequence
Length = 1030
Score = 88.6 bits (187), Expect(2) = 2e-027
Identities = 32/68 (47%), Positives = 46/68 (67%)
Frame = +3 / -1
Query: 156 PEGFEERVNGRGLVCRGWVPQPRLLAHESVGGFLTHAGWNSIAEGLSRGVTMVLLPLMFD 335
PE + ERV GRG+V W PQ +L H +VG F+TH GWNS+ E ++ GV ++ P++F+
Sbjct: 619 PERWHERVGGRGMVATAWAPQRAILGHRAVGAFVTHCGWNSVLETVAAGVPVLTWPIVFE 440
Query: 336 QGLNARLL 359
Q + RLL
Sbjct: 439 QFITERLL 416
Score = 54.7 bits (113), Expect(2) = 2e-027
Identities = 23/37 (62%), Positives = 27/37 (72%)
Frame = +3 / -1
Query: 3 SVVYAAFGSEAKLTSAQLQTIALGLEASGLPFLWAFR 113
SVVY FGS A ++ AQL +ALGLEASG+ FLW R
Sbjct: 748 SVVYLCFGSLAHVSDAQLDELALGLEASGMAFLWVVR 638
>gb|BT009372.1| Triticum aestivum clone wlm96.pk028.k4:fis, full insert mRNA sequence
Length = 1736
Score = 97.7 bits (207), Expect(2) = 8e-027
Identities = 38/71 (53%), Positives = 49/71 (69%)
Frame = +3 / +2
Query: 153 LPEGFEERVNGRGLVCRGWVPQPRLLAHESVGGFLTHAGWNSIAEGLSRGVTMVLLPLMF 332
L + FEERV RG+V RGW PQ +L H++VGGF+TH GWNS EG+ GV M+ P
Sbjct: 1088 LADEFEERVKNRGMVIRGWAPQLMILQHQAVGGFVTHCGWNSTIEGICAGVPMITWPHFG 1267
Query: 333 DQGLNARLLMD 365
+Q LN +LL+D
Sbjct: 1268 EQFLNEKLLVD 1300
Score = 43.2 bits (88), Expect(2) = 8e-027
Identities = 19/40 (47%), Positives = 24/40 (60%)
Frame = +3 / +2
Query: 3 SVVYAAFGSEAKLTSAQLQTIALGLEASGLPFLWAFRPPA 122
SVV+ +FGS A T QL + LGLE S PF+W + A
Sbjct: 944 SVVFVSFGSLACTTPQQLVELGLGLETSRKPFIWVIKAGA 1063
>gb|CK209010.1|CK209010 FGAS020743 Triticum aestivum FGAS: Library 5 GATE 7 Triticum
aestivum cDNA, mRNA sequence
Length = 1167
Score = 90.9 bits (192), Expect(2) = 1e-026
Identities = 37/71 (52%), Positives = 44/71 (61%)
Frame = +3 / -3
Query: 153 LPEGFEERVNGRGLVCRGWVPQPRLLAHESVGGFLTHAGWNSIAEGLSRGVTMVLLPLMF 332
LPEGF ER+ GL+ W PQ +LAHE+ GGFL H GWNS+ E L GV MV PL
Sbjct: 274 LPEGFVERIKDVGLLVPSWAPQTEVLAHEATGGFLVHCGWNSVLESLVHGVPMVAWPLFA 95
Query: 333 DQGLNARLLMD 365
+Q NA L +
Sbjct: 94 EQRQNAVTLSE 62
Score = 49.6 bits (102), Expect(2) = 1e-026
Identities = 19/41 (46%), Positives = 27/41 (65%)
Frame = +3 / -3
Query: 3 SVVYAAFGSEAKLTSAQLQTIALGLEASGLPFLWAFRPPAD 125
SV++ +FGS L + ++ +ALGLE SG FLW R P+D
Sbjct: 457 SVIFVSFGSGGSLPAEHMRELALGLELSGQRFLWVVRSPSD 335
>gb|CK216261.1|CK216261 FGAS028248 Triticum aestivum FGAS: Library 6 CAP GATE 1 Triticum
aestivum cDNA, mRNA sequence
Length = 1093
Score = 95.5 bits (202), Expect(2) = 1e-026
Identities = 38/68 (55%), Positives = 47/68 (69%)
Frame = +3 / -1
Query: 162 GFEERVNGRGLVCRGWVPQPRLLAHESVGGFLTHAGWNSIAEGLSRGVTMVLLPLMFDQG 341
GF+ RV RGLV RGW PQ +L+H +VGGFLTH GWNS E LS GV ++ P DQ
Sbjct: 580 GFDARVECRGLVIRGWAPQMTILSHPAVGGFLTHCGWNSTLESLSNGVPLLTWPHFADQF 401
Query: 342 LNARLLMD 365
LN +L++D
Sbjct: 400 LNEKLVVD 377
Score = 45.1 bits (92), Expect(2) = 1e-026
Identities = 20/45 (44%), Positives = 27/45 (60%)
Frame = +3 / -1
Query: 3 SVVYAAFGSEAKLTSAQLQTIALGLEASGLPFLWAFRPPADAAPG 137
SV+Y +FGS A+L Q+ +A GLEAS PF+W + D G
Sbjct: 712 SVLYVSFGSIARLLPPQVAELAPGLEASERPFVWVAKEGDDVDAG 578
>gb|DR432305.1|DR432305 441E-825 Line 441 epidermal library Triticum monococcum cDNA, mRNA
sequence
Length = 656
Score = 97.3 bits (206), Expect(2) = 1e-026
Identities = 37/71 (52%), Positives = 49/71 (69%)
Frame = +3 / +3
Query: 153 LPEGFEERVNGRGLVCRGWVPQPRLLAHESVGGFLTHAGWNSIAEGLSRGVTMVLLPLMF 332
L + FEERV RG+V RGW PQ +L H+++GGF+TH GWNS EG+ GV M+ P
Sbjct: 255 LADEFEERVKNRGMVIRGWAPQLMILQHQAIGGFVTHCGWNSTIEGICAGVPMITWPHFG 434
Query: 333 DQGLNARLLMD 365
+Q LN +LL+D
Sbjct: 435 EQFLNEKLLVD 467
Score = 43.2 bits (88), Expect(2) = 1e-026
Identities = 19/40 (47%), Positives = 24/40 (60%)
Frame = +3 / +3
Query: 3 SVVYAAFGSEAKLTSAQLQTIALGLEASGLPFLWAFRPPA 122
SVV+ +FGS A T QL + LGLE S PF+W + A
Sbjct: 111 SVVFVSFGSLACTTPQQLVELGLGLETSRKPFIWVIKAGA 230
>gb|CD870082.1|CD870082 AZO2.113H02R010522 AZO2 Triticum aestivum cDNA clone AZO2113H02,
mRNA sequence
Length = 545
Score = 118 bits (253), Expect = 5e-026
Identities = 49/106 (46%), Positives = 68/106 (64%)
Frame = +3 / -1
Query: 147 GGLPEGFEERVNGRGLVCRGWVPQPRLLAHESVGGFLTHAGWNSIAEGLSRGVTMVLLPL 326
G LP+GFEER GRG+V GWVPQ + LAH +V FLT GW S E + G +V+LP
Sbjct: 521 GVLPDGFEERTRGRGMVETGWVPQVKALAHGAVAAFLTPCGWGSPVESFAFGPPLVMLPF 342
Query: 327 MFDQGLNARLLMDKKIGIEVERNEDDGTFAPKDIADALRTAMAENQ 464
+ D L AR + +K +G+EV R+E DG+F +A A+R M +++
Sbjct: 341 VVDPPLVARTMAEKGVGVEVARDETDGSFDRDGVAAAVRRVMVDDE 204
>gb|CV779260.1|CV779260 FGAS073669 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 840
Score = 95.0 bits (201), Expect(2) = 6e-026
Identities = 35/68 (51%), Positives = 47/68 (69%)
Frame = +3 / +2
Query: 153 LPEGFEERVNGRGLVCRGWVPQPRLLAHESVGGFLTHAGWNSIAEGLSRGVTMVLLPLMF 332
L +GFEERV RG++ RGW PQ +L H+++GGF+TH GWNS EG+ GV M+ P
Sbjct: 494 LADGFEERVKDRGMIIRGWAPQVMILWHQAIGGFVTHCGWNSTIEGICAGVPMITWPHFA 673
Query: 333 DQGLNARL 356
+Q LN +L
Sbjct: 674 EQFLNEKL 697
Score = 43.2 bits (88), Expect(2) = 6e-026
Identities = 17/37 (45%), Positives = 24/37 (64%)
Frame = +3 / +2
Query: 3 SVVYAAFGSEAKLTSAQLQTIALGLEASGLPFLWAFR 113
SV++ +FGS A T Q+ + LGLEAS PF+W +
Sbjct: 350 SVIFVSFGSLACTTPQQIVELGLGLEASKKPFIWVIK 460
>gb|CV759077.1|CV759077 FGAS053459 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 849
Score = 88.1 bits (186), Expect(2) = 1e-025
Identities = 35/72 (48%), Positives = 46/72 (63%)
Frame = +3 / -1
Query: 153 LPEGFEERVNGRGLVCRGWVPQPRLLAHESVGGFLTHAGWNSIAEGLSRGVTMVLLPLMF 332
LPEGF +R G GLV + W PQ +LAH +VGGF+TH GWNS+ E + GV M PL
Sbjct: 342 LPEGFLDRTKGTGLVVKSWAPQRDVLAHGAVGGFVTHCGWNSVLEAVMAGVPMRAWPLYA 163
Query: 333 DQGLNARLLMDK 368
+Q +N L ++
Sbjct: 162 EQRMNRVFLEEE 127
Score = 49.2 bits (101), Expect(2) = 1e-025
Identities = 22/53 (41%), Positives = 30/53 (56%)
Frame = +3 / -1
Query: 3 SVVYAAFGSEAKLTSAQLQTIALGLEASGLPFLWAFRPPADAAPGQGTGGLPE 161
SVV+ FGS + Q++ +A+GLEASG FLW R P + P + PE
Sbjct: 519 SVVFLCFGSLGVFDARQIREVAIGLEASGKRFLWVVRSPPNDDPAKKFEEPPE 361
>gb|CD453031.1|CD453031 WHE1452_G06_M12ZT CS wheat etiolated seedling root normalized cDNA
library Triticum aestivum cDNA clone WHE1452_G06_M12,
mRNA sequence
Length = 589
Score = 116 bits (249), Expect = 2e-025
Identities = 45/90 (50%), Positives = 63/90 (70%)
Frame = +3 / -2
Query: 189 GLVCRGWVPQPRLLAHESVGGFLTHAGWNSIAEGLSRGVTMVLLPLMFDQGLNARLLMDK 368
GLV GWVPQ +LAH++V FLTH GWNS EGL G +++LP+ DQG NAR++ +
Sbjct: 585 GLVVTGWVPQISVLAHDAVAAFLTHCGWNSTIEGLLFGHPLIMLPISSDQGPNARIMEGR 406
Query: 369 KIGIEVERNEDDGTFAPKDIADALRTAMAE 458
K+G++V RNE DG+F+ +D+A +R E
Sbjct: 405 KVGMQVPRNESDGSFSREDVAVTVRAVTVE 316
>gb|BJ225207.1|BJ225207 BJ225207 Y. Ogihara unpublished cDNA library, Wh_dL Triticum
aestivum cDNA clone whdl21a16 5', mRNA sequence
Length = 665
Score = 108 bits (230), Expect(2) = 3e-025
Identities = 46/85 (54%), Positives = 57/85 (67%)
Frame = +3 / +2
Query: 153 LPEGFEERVNGRGLVCRGWVPQPRLLAHESVGGFLTHAGWNSIAEGLSRGVTMVLLPLMF 332
LP GFEER+ GRGLV G VPQ R+LAH SVG FLTH+G S EG+ G +V+LP
Sbjct: 74 LPPGFEERIKGRGLVAMGMVPQTRVLAHGSVGAFLTHSGPGSAIEGIQYGHPLVMLPFFG 253
Query: 333 DQGLNARLLMDKKIGIEVERNEDDG 407
DQ A+ + KK+G+ V RN +DG
Sbjct: 254 DQQTGAQFMERKKVGLLVPRNGEDG 328
Score = 27.6 bits (54), Expect(2) = 3e-025
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = +3 / +2
Query: 75 LEASGLPFLWAFRPPAD 125
LE +G PFLWA R D
Sbjct: 14 LELAGTPFLWALRKVGD 64
>gb|CD895871.1|CD895871 G174.101C21F010821 G174 Triticum aestivum cDNA clone G174101C21,
mRNA sequence
Length = 619
Score = 86.3 bits (182), Expect(2) = 3e-025
Identities = 31/70 (44%), Positives = 46/70 (65%)
Frame = +3 / +2
Query: 156 PEGFEERVNGRGLVCRGWVPQPRLLAHESVGGFLTHAGWNSIAEGLSRGVTMVLLPLMFD 335
PEG+ ERV RGL+ W PQ +L H +VG F+TH GWNS+ E + GV ++ P++F+
Sbjct: 134 PEGWSERVGDRGLLVTAWAPQTAILGHPAVGAFVTHCGWNSVLETVMAGVPVLTWPMVFE 313
Query: 336 QGLNARLLMD 365
Q + RL+ +
Sbjct: 314 QFITERLVTE 343
Score = 49.6 bits (102), Expect(2) = 3e-025
Identities = 20/41 (48%), Positives = 27/41 (65%)
Frame = +3 / +2
Query: 21 FGSEAKLTSAQLQTIALGLEASGLPFLWAFRPPADAAPGQG 143
FGS ++ AQL+ +ALGLEA+G PFLW R + P +G
Sbjct: 20 FGSLTHVSDAQLRQLALGLEAAGKPFLWVVRDAGNWTPPEG 142
>gb|CD937281.1|CD937281 OV.106I05F010202 OV Triticum aestivum cDNA clone OV106I05, mRNA
sequence
Length = 704
Score = 88.1 bits (186), Expect(2) = 4e-025
Identities = 35/69 (50%), Positives = 46/69 (66%)
Frame = +3 / +1
Query: 153 LPEGFEERVNGRGLVCRGWVPQPRLLAHESVGGFLTHAGWNSIAEGLSRGVTMVLLPLMF 332
LP+GF ER GRGLV + W PQ +LAH++V F+TH GWNS+ E + GV M+ PL
Sbjct: 376 LPQGFLERTQGRGLVVKSWAPQRDVLAHDAVDCFVTHCGWNSVLESVMAGVPMLAWPLYA 555
Query: 333 DQGLNARLL 359
+Q +NA L
Sbjct: 556 EQLMNAVFL 582
Score = 47.3 bits (97), Expect(2) = 4e-025
Identities = 21/53 (39%), Positives = 30/53 (56%)
Frame = +3 / +1
Query: 3 SVVYAAFGSEAKLTSAQLQTIALGLEASGLPFLWAFRPPADAAPGQGTGGLPE 161
SVV+ +FGS + ++ Q + +A GLEASG FLW R P + + PE
Sbjct: 199 SVVFLSFGSLGRFSAKQTRKVAAGLEASGHRFLWVVRSPPSDNSSKNSEKPPE 357
>gb|BQ902281.1|BQ902281 Ta02_07b07_R
Ta02_AAFC_ECORC_Fusarium_graminearum_inoculated_wheat_he
ads Triticum aestivum cDNA clone Ta02_07b07, mRNA
sequence
Length = 666
Score = 87.7 bits (185), Expect(2) = 1e-024
Identities = 34/70 (48%), Positives = 46/70 (65%)
Frame = +3 / +3
Query: 156 PEGFEERVNGRGLVCRGWVPQPRLLAHESVGGFLTHAGWNSIAEGLSRGVTMVLLPLMFD 335
P+G+E+RV RG++ R W +LAH +VG FLTH GWNSI E ++ GV M+ P D
Sbjct: 123 PKGWEKRVEDRGVIIRSWAQTTAILAHPAVGTFLTHCGWNSILEAVAAGVPMLTWPKFHD 302
Query: 336 QGLNARLLMD 365
Q +N RL+ D
Sbjct: 303 QFVNERLIND 332
Score = 46.0 bits (94), Expect(2) = 1e-024
Identities = 22/42 (52%), Positives = 26/42 (61%)
Frame = +3 / +3
Query: 18 AFGSEAKLTSAQLQTIALGLEASGLPFLWAFRPPADAAPGQG 143
+FGS A + AQL +ALGLEAS PFLWA R P +G
Sbjct: 6 SFGSCALGSHAQLDQLALGLEASXKPFLWAVRAAEKWTPPKG 131
>gb|AJ614844.1|AJ614844 AJ614844 Triticum turgidum subsp. durum etiolated seedling 20 day
Triticum turgidum subsp. durum cDNA clone 10819R, mRNA
sequence
Length = 739
Score = 72.1 bits (151), Expect(2) = 3e-024
Identities = 26/52 (50%), Positives = 35/52 (67%)
Frame = +3 / +2
Query: 156 PEGFEERVNGRGLVCRGWVPQPRLLAHESVGGFLTHAGWNSIAEGLSRGVTM 311
P+G+E+RV RG++ R W +LAH +VG FLTH GWNS E ++ GV M
Sbjct: 584 PKGWEKRVEDRGVIIRSWAQTTAILAHPAVGAFLTHCGWNSXLEAVATGVPM 739
Score = 60.2 bits (125), Expect(2) = 3e-024
Identities = 27/47 (57%), Positives = 32/47 (68%)
Frame = +3 / +2
Query: 3 SVVYAAFGSEAKLTSAQLQTIALGLEASGLPFLWAFRPPADAAPGQG 143
SVVY +FGS A ++ AQL +ALGLEASG PFLWA R P +G
Sbjct: 452 SVVYVSFGSCALVSHAQLDQLALGLEASGKPFLWAVRAAEKWTPPKG 592
>gb|BJ295169.1|BJ295169 BJ295169 Y. Ogihara unpublished cDNA library, Wh_SL Triticum
aestivum cDNA clone whsl2a06 3', mRNA sequence
Length = 718
Score = 98.7 bits (209), Expect(2) = 3e-024
Identities = 36/71 (50%), Positives = 50/71 (70%)
Frame = +3 / -2
Query: 153 LPEGFEERVNGRGLVCRGWVPQPRLLAHESVGGFLTHAGWNSIAEGLSRGVTMVLLPLMF 332
L +GFEERV RG++ RGW PQ +L H+++GGF+TH GWNS EG+ GV M+ P
Sbjct: 594 LADGFEERVKDRGMIIRGWAPQVMILWHQAIGGFVTHCGWNSTIEGICAGVPMITWPHFA 415
Query: 333 DQGLNARLLMD 365
+Q LN +L++D
Sbjct: 414 EQFLNEKLVVD 382
Score = 33.6 bits (67), Expect(2) = 3e-024
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = +3 / -2
Query: 24 GSEAKLTSAQLQTIALGLEASGLPFLWAFR 113
GS A T Q+ + LGLEAS PF+W +
Sbjct: 717 GSLACTTPQQIVELGLGLEASKKPFIWVIK 628
>gb|BQ901353.1|BQ901353 Ta02_18d02_R
Ta02_AAFC_ECORC_Fusarium_graminearum_inoculated_wheat_he
ads Triticum aestivum cDNA clone Ta02_18d02, mRNA
sequence
Length = 753
Score = 84.9 bits (179), Expect(2) = 4e-024
Identities = 33/70 (47%), Positives = 44/70 (62%)
Frame = +3 / -3
Query: 156 PEGFEERVNGRGLVCRGWVPQPRLLAHESVGGFLTHAGWNSIAEGLSRGVTMVLLPLMFD 335
P+G+E+RV RG + R W +L H +VG FLTH GWNSI E ++ GV M+ P D
Sbjct: 631 PKGWEKRVEDRGXIIRSWAQTTAILXHPAVGTFLTHCGWNSILEAVAAGVPMLTWPKFHD 452
Query: 336 QGLNARLLMD 365
Q +N RL+ D
Sbjct: 451 QFVNERLIND 422
Score = 46.9 bits (96), Expect(2) = 4e-024
Identities = 21/42 (50%), Positives = 26/42 (61%)
Frame = +3 / -3
Query: 18 AFGSEAKLTSAQLQTIALGLEASGLPFLWAFRPPADAAPGQG 143
+FGS A ++ AQL +ALG ASG PFLWA R P +G
Sbjct: 748 SFGSCALVSHAQLDQLALGXXASGXPFLWAVRAAEKWTPPKG 623
>gb|CK205865.1|CK205865 FGAS017415 Triticum aestivum FGAS: Library 5 GATE 7 Triticum
aestivum cDNA, mRNA sequence
Length = 1070
Score = 88.6 bits (187), Expect(2) = 6e-024
Identities = 39/85 (45%), Positives = 52/85 (61%)
Frame = +3 / -3
Query: 153 LPEGFEERVNGRGLVCRGWVPQPRLLAHESVGGFLTHAGWNSIAEGLSRGVTMVLLPLMF 332
L EGF ERV GRGLV + WV Q +L H +VG +L+H GWNS+ E + GV M+ P +
Sbjct: 600 LGEGFLERVQGRGLVTKEWVDQEAVLKHPAVGLYLSHCGWNSVTESAAYGVPMLAWPTLG 421
Query: 333 DQGLNARLLMDKKIGIEVERNEDDG 407
DQ L A+++ G+ VE DG
Sbjct: 420 DQRLIAKVIKSGGFGLWVEHWSWDG 346
Score = 42.8 bits (87), Expect(2) = 6e-024
Identities = 18/37 (48%), Positives = 22/37 (59%)
Frame = +3 / -3
Query: 3 SVVYAAFGSEAKLTSAQLQTIALGLEASGLPFLWAFR 113
SVVY AFG+ Q++ I GLEASG FLW +
Sbjct: 756 SVVYVAFGNRNAAALEQIREIGAGLEASGCRFLWVVK 646
>gb|CD902980.1|CD902980 G356.108L17F010918 G356 Triticum aestivum cDNA clone G356108L17,
mRNA sequence
Length = 674
Score = 81.3 bits (171), Expect(2) = 8e-024
Identities = 33/70 (47%), Positives = 42/70 (60%)
Frame = +3 / +3
Query: 153 LPEGFEERVNGRGLVCRGWVPQPRLLAHESVGGFLTHAGWNSIAEGLSRGVTMVLLPLMF 332
LPEGF ER +GL W PQ R+L H + F++H GWNS E +S GV MV PL
Sbjct: 270 LPEGFLERTKDKGLAVAAWAPQVRVLTHPATAVFVSHCGWNSALESVSAGVPMVAWPLYA 449
Query: 333 DQGLNARLLM 362
+Q +NA L+
Sbjct: 450 EQRMNAVALV 479
Score = 49.6 bits (102), Expect(2) = 8e-024
Identities = 22/39 (56%), Positives = 24/39 (61%)
Frame = +3 / +3
Query: 3 SVVYAAFGSEAKLTSAQLQTIALGLEASGLPFLWAFRPP 119
SVVY +FGS LT Q +A GLEASG FLW R P
Sbjct: 90 SVVYVSFGSGGSLTVGQTAELAAGLEASGHRFLWVVRMP 206
>gb|BJ284242.1|BJ284242 BJ284242 Y. Ogihara unpublished cDNA library, Wh_r Triticum
aestivum cDNA clone whr1k09 3', mRNA sequence
Length = 717
Score = 64.8 bits (135), Expect(2) = 2e-023
Identities = 24/54 (44%), Positives = 32/54 (59%)
Frame = +3 / -1
Query: 204 GWVPQPRLLAHESVGGFLTHAGWNSIAEGLSRGVTMVLLPLMFDQGLNARLLMD 365
GW PQ ++L H +VG F+TH GWNS EG+ G+ M+ P DQ N + D
Sbjct: 420 GWAPQEQVLGHPAVGCFVTHCGWNSTLEGVRNGLPMLCWPYFTDQFTNQTYICD 259
Score = 64.8 bits (135), Expect(2) = 2e-023
Identities = 29/54 (53%), Positives = 35/54 (64%)
Frame = +3 / -1
Query: 3 SVVYAAFGSEAKLTSAQLQTIALGLEASGLPFLWAFRPPADAAPGQGTGGLPEG 164
SVVY AFGS + +T+AQLQ +ALGLE+SG PFLW RP G G +G
Sbjct: 603 SVVYVAFGSISIMTAAQLQELALGLESSGRPFLWVVRPEQAGKLPAGFAGAIDG 442
>gb|BE405307.1|BE405307 WHE1210_B01_C02ZS Wheat etiolated seedling root cDNA library
Triticum aestivum cDNA clone WHE1210_B01_C02, mRNA
sequence
Length = 637
Score = 81.7 bits (172), Expect(2) = 4e-023
Identities = 33/72 (45%), Positives = 42/72 (58%)
Frame = +3 / +3
Query: 153 LPEGFEERVNGRGLVCRGWVPQPRLLAHESVGGFLTHAGWNSIAEGLSRGVTMVLLPLMF 332
LP GF ER GLV W PQ R+L H + G LTH GWNS+ E + GV M+ PL
Sbjct: 180 LPSGFLERTKEVGLVVPSWAPQVRVLGHRATGAMLTHCGWNSVLESVMHGVPMIAWPLYA 359
Query: 333 DQGLNARLLMDK 368
+Q NA +L ++
Sbjct: 360 EQRQNAVMLHEE 395
Score = 46.9 bits (96), Expect(2) = 4e-023
Identities = 19/42 (45%), Positives = 26/42 (61%)
Frame = +3 / +3
Query: 18 AFGSEAKLTSAQLQTIALGLEASGLPFLWAFRPPADAAPGQG 143
+FGS + L++AQ+ +A GLE SG FLW R P D+ G
Sbjct: 6 SFGSGSALSAAQMDELARGLELSGQRFLWVVRSPTDSGADPG 131
>gb|CA732916.1|CA732916 wlp1c.pk006.g19 wlp1c Triticum aestivum cDNA clone wlp1c.pk006.g19
5' end, mRNA sequence
Length = 623
Score = 84.0 bits (177), Expect(3) = 5e-023
Identities = 30/65 (46%), Positives = 42/65 (64%)
Frame = +3 / +2
Query: 153 LPEGFEERVNGRGLVCRGWVPQPRLLAHESVGGFLTHAGWNSIAEGLSRGVTMVLLPLMF 332
+PEGF ER RGLV + W PQ +L H + G F+TH GWNS EG++ G+ ++ PL
Sbjct: 161 MPEGFLERTKDRGLVIKSWAPQVEVLRHRATGAFMTHCGWNSTLEGITAGLPLLCWPLYA 340
Query: 333 DQGLN 347
+Q +N
Sbjct: 341 EQKVN 355
Score = 38.2 bits (77), Expect(3) = 5e-023
Identities = 17/34 (50%), Positives = 20/34 (58%)
Frame = +3 / +2
Query: 18 AFGSEAKLTSAQLQTIALGLEASGLPFLWAFRPP 119
+FGS + QLQ IA GL+ SG FLW R P
Sbjct: 2 SFGSMGTFSVQQLQEIANGLDKSGERFLWVVRSP 103
Score = 23.5 bits (45), Expect(3) = 5e-023
Identities = 12/30 (40%), Positives = 13/30 (43%)
Frame = +1 / +3
Query: 385 WRGTKTTARSRPKTSRML*GRPWRRTKTGL 474
WR + R T R L R WRR GL
Sbjct: 369 WRE*SSGWR*EATTKRWLXPRRWRRRSXGL 458
>gb|DR739942.1|DR739942 FGAS000208 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 1103
Score = 64.8 bits (135), Expect(2) = 5e-023
Identities = 27/38 (71%), Positives = 31/38 (81%)
Frame = +3 / +1
Query: 3 SVVYAAFGSEAKLTSAQLQTIALGLEASGLPFLWAFRP 116
SVVY AFGS + +T+AQLQ +ALGLEASG PFLW RP
Sbjct: 517 SVVYVAFGSISIMTAAQLQELALGLEASGRPFLWVVRP 630
Score = 63.4 bits (132), Expect(2) = 5e-023
Identities = 22/45 (48%), Positives = 30/45 (66%)
Frame = +3 / +1
Query: 204 GWVPQPRLLAHESVGGFLTHAGWNSIAEGLSRGVTMVLLPLMFDQ 338
GW PQ ++L H +VG F+TH GWNS EG+ G++M+ P DQ
Sbjct: 700 GWAPQEQVLGHPAVGCFVTHCGWNSTLEGIRNGLSMLCWPYFTDQ 834
>gb|BJ228434.1|BJ228434 BJ228434 Y. Ogihara unpublished cDNA library, Wh_dL Triticum
aestivum cDNA clone whdl6f11 3', mRNA sequence
Length = 695
Score = 82.2 bits (173), Expect(2) = 8e-023
Identities = 33/71 (46%), Positives = 43/71 (60%)
Frame = +3 / -2
Query: 156 PEGFEERVNGRGLVCRGWVPQPRLLAHESVGGFLTHAGWNSIAEGLSRGVTMVLLPLMFD 335
PEGF R R LV WVPQ +LAH +V GF+TH GWNS+ E + GV M+ PL +
Sbjct: 520 PEGFLHRTKERALVVMSWVPQQAVLAHGAVAGFVTHCGWNSVLEAVMAGVPMLAWPLYAE 341
Query: 336 QGLNARLLMDK 368
Q N L+++
Sbjct: 340 QHTNKVFLVEE 308
Score = 45.5 bits (93), Expect(2) = 8e-023
Identities = 18/39 (46%), Positives = 26/39 (66%)
Frame = +3 / -2
Query: 3 SVVYAAFGSEAKLTSAQLQTIALGLEASGLPFLWAFRPP 119
SVV+ +FGS + ++ Q++ +A GLE SG FLW R P
Sbjct: 682 SVVFLSFGSLGRFSAEQIKQMAAGLETSGQRFLWVVRRP 566
>gb|BQ752990.1|BQ752990 WHE4121_F06_K11ZS Wheat salt-stressed root cDNA library Triticum
aestivum cDNA clone WHE4121_F06_K11, mRNA sequence
Length = 680
Score = 88.6 bits (187), Expect(2) = 1e-022
Identities = 34/70 (48%), Positives = 46/70 (65%)
Frame = +3 / +2
Query: 156 PEGFEERVNGRGLVCRGWVPQPRLLAHESVGGFLTHAGWNSIAEGLSRGVTMVLLPLMFD 335
P+G+E+RV RG++ R W +LAH +VG FLTH GWNSI E ++ GV M+ P D
Sbjct: 89 PKGWEKRVEDRGVIIRSWAQTTAILAHPAVGAFLTHCGWNSILEAVAAGVPMLTWPKFHD 268
Query: 336 QGLNARLLMD 365
Q +N RL+ D
Sbjct: 269 QFVNERLIND 298
Score = 38.6 bits (78), Expect(2) = 1e-022
Identities = 16/27 (59%), Positives = 18/27 (66%)
Frame = +3 / +2
Query: 63 IALGLEASGLPFLWAFRPPADAAPGQG 143
+ALGLEASG PFLWA R P +G
Sbjct: 17 LALGLEASGKPFLWAVRAAEKWTPPKG 97
>gb|CK211682.1|CK211682 FGAS023536 Triticum aestivum FGAS: Library 6 CAP GATE 1 Triticum
aestivum cDNA, mRNA sequence
Length = 1112
Score = 90.9 bits (192), Expect(2) = 1e-022
Identities = 35/69 (50%), Positives = 46/69 (66%)
Frame = +3 / -1
Query: 159 EGFEERVNGRGLVCRGWVPQPRLLAHESVGGFLTHAGWNSIAEGLSRGVTMVLLPLMFDQ 338
+ E R GRGLV RGW PQ +L+H +VG F+TH GWNS+ E ++ GV +V P + DQ
Sbjct: 623 QALEARTAGRGLVVRGWAPQLAILSHRAVGAFVTHCGWNSLLESIAHGVPVVTWPHLADQ 444
Query: 339 GLNARLLMD 365
LN RL +D
Sbjct: 443 FLNERLAVD 417
Score = 35.9 bits (72), Expect(2) = 1e-022
Identities = 16/39 (41%), Positives = 21/39 (53%)
Frame = +3 / -1
Query: 15 AAFGSEAKLTSAQLQTIALGLEASGLPFLWAFRPPADAA 131
A+FG ++ QL + GLE SG PFLW + AA
Sbjct: 764 ASFGIFVRVLHEQLYEVGHGLEDSGRPFLWVVKESEAAA 648
>gb|CK193504.1|CK193504 FGAS001918 Triticum aestivum FGAS: Library 3 Gate 6 Triticum
aestivum cDNA, mRNA sequence
Length = 821
Score = 75.3 bits (158), Expect(3) = 2e-022
Identities = 29/53 (54%), Positives = 36/53 (67%)
Frame = +3 / +2
Query: 207 WVPQPRLLAHESVGGFLTHAGWNSIAEGLSRGVTMVLLPLMFDQGLNARLLMD 365
W PQ +LAH +VG F+TH+GWNS E +S GV M+ LPL DQ NAR + D
Sbjct: 392 WAPQVEVLAHPAVGAFITHSGWNSTVEAVSEGVPMICLPLHGDQFSNARYVCD 550
Score = 43.7 bits (89), Expect(3) = 2e-022
Identities = 19/38 (50%), Positives = 23/38 (60%)
Frame = +3 / +2
Query: 3 SVVYAAFGSEAKLTSAQLQTIALGLEASGLPFLWAFRP 116
SVVY +FGS A + + +A GL AS PFLW RP
Sbjct: 197 SVVYVSFGSLAAMDPHEFVELAWGLAASKRPFLWVVRP 310
Score = 24.9 bits (48), Expect(3) = 2e-022
Identities = 14/32 (43%), Positives = 16/32 (50%)
Frame = +1 / +3
Query: 94 RSSGHSGRQPTPHPDKARAGCLKASRSVSMAG 189
RSSG SG + + A SRSV MAG
Sbjct: 288 RSSGSSGPRSSAATSPASCPTGSTSRSVIMAG 383
>gb|CD865781.1|CD865781 AZO2.101M06F001124 AZO2 Triticum aestivum cDNA clone AZO2101M06,
mRNA sequence
Length = 723
Score = 75.3 bits (158), Expect(3) = 2e-022
Identities = 29/53 (54%), Positives = 36/53 (67%)
Frame = +3 / +1
Query: 207 WVPQPRLLAHESVGGFLTHAGWNSIAEGLSRGVTMVLLPLMFDQGLNARLLMD 365
W PQ +LAH +VG F+TH+GWNS E +S GV M+ LPL DQ NAR + D
Sbjct: 409 WAPQVEVLAHPAVGAFITHSGWNSTVEAVSEGVPMICLPLHGDQFSNARYVCD 567
Score = 43.7 bits (89), Expect(3) = 2e-022
Identities = 19/38 (50%), Positives = 23/38 (60%)
Frame = +3 / +1
Query: 3 SVVYAAFGSEAKLTSAQLQTIALGLEASGLPFLWAFRP 116
SVVY +FGS A + + +A GL AS PFLW RP
Sbjct: 214 SVVYVSFGSLAAMDPHEFVELAWGLAASKRPFLWVVRP 327
Score = 24.9 bits (48), Expect(3) = 2e-022
Identities = 14/32 (43%), Positives = 16/32 (50%)
Frame = +1 / +2
Query: 94 RSSGHSGRQPTPHPDKARAGCLKASRSVSMAG 189
RSSG SG + + A SRSV MAG
Sbjct: 305 RSSGSSGPRSSAATSPASCPTGSTSRSVIMAG 400
>gb|BQ743938.1|BQ743938 WHE4109_H10_O19ZS Wheat salt-stressed root cDNA library Triticum
aestivum cDNA clone WHE4109_H10_O19, mRNA sequence
Length = 656
Score = 75.3 bits (158), Expect(3) = 2e-022
Identities = 29/53 (54%), Positives = 36/53 (67%)
Frame = +3 / +1
Query: 207 WVPQPRLLAHESVGGFLTHAGWNSIAEGLSRGVTMVLLPLMFDQGLNARLLMD 365
W PQ +LAH +VG F+TH+GWNS E +S GV M+ LPL DQ NAR + D
Sbjct: 493 WAPQVEVLAHPAVGAFITHSGWNSTVEAVSEGVPMICLPLHGDQFSNARYVCD 651
Score = 43.7 bits (89), Expect(3) = 2e-022
Identities = 19/38 (50%), Positives = 23/38 (60%)
Frame = +3 / +1
Query: 3 SVVYAAFGSEAKLTSAQLQTIALGLEASGLPFLWAFRP 116
SVVY +FGS A + + +A GL AS PFLW RP
Sbjct: 298 SVVYVSFGSLAAMDPHEFVELAWGLAASKRPFLWVVRP 411
Score = 24.9 bits (48), Expect(3) = 2e-022
Identities = 14/32 (43%), Positives = 16/32 (50%)
Frame = +1 / +2
Query: 94 RSSGHSGRQPTPHPDKARAGCLKASRSVSMAG 189
RSSG SG + + A SRSV MAG
Sbjct: 389 RSSGSSGPRSSAATSPASCPTGSTSRSVIMAG 484
>gb|BE405606.1|BE405606 WHE1209_C09_E17ZS Wheat etiolated seedling root cDNA library
Triticum aestivum cDNA clone WHE1209_C09_E17, mRNA
sequence
Length = 634
Score = 75.3 bits (158), Expect(3) = 2e-022
Identities = 29/53 (54%), Positives = 36/53 (67%)
Frame = +3 / +2
Query: 207 WVPQPRLLAHESVGGFLTHAGWNSIAEGLSRGVTMVLLPLMFDQGLNARLLMD 365
W PQ +LAH +VG F+TH+GWNS E +S GV M+ LPL DQ NAR + D
Sbjct: 470 WAPQVEVLAHPAVGAFITHSGWNSTVEAVSEGVPMICLPLHGDQFSNARYVCD 628
Score = 43.7 bits (89), Expect(3) = 2e-022
Identities = 19/38 (50%), Positives = 23/38 (60%)
Frame = +3 / +2
Query: 3 SVVYAAFGSEAKLTSAQLQTIALGLEASGLPFLWAFRP 116
SVVY +FGS A + + +A GL AS PFLW RP
Sbjct: 275 SVVYVSFGSLAAMDPHEFVELAWGLAASKRPFLWVVRP 388
Score = 24.9 bits (48), Expect(3) = 2e-022
Identities = 14/32 (43%), Positives = 16/32 (50%)
Frame = +1 / +3
Query: 94 RSSGHSGRQPTPHPDKARAGCLKASRSVSMAG 189
RSSG SG + + A SRSV MAG
Sbjct: 366 RSSGSSGPRSSAATSPASCPTGSTSRSVIMAG 461
>gb|BJ281677.1|BJ281677 BJ281677 Y. Ogihara unpublished cDNA library, Wh_r Triticum
aestivum cDNA clone whr23e01 5', mRNA sequence
Length = 549
Score = 75.3 bits (158), Expect(3) = 2e-022
Identities = 29/53 (54%), Positives = 36/53 (67%)
Frame = +3 / +3
Query: 207 WVPQPRLLAHESVGGFLTHAGWNSIAEGLSRGVTMVLLPLMFDQGLNARLLMD 365
W PQ +LAH +VG F+TH+GWNS E +S GV M+ LPL DQ NAR + D
Sbjct: 264 WAPQVEVLAHPAVGAFITHSGWNSTVEAVSEGVPMICLPLHGDQFSNARYVCD 422
Score = 43.7 bits (89), Expect(3) = 2e-022
Identities = 19/38 (50%), Positives = 23/38 (60%)
Frame = +3 / +3
Query: 3 SVVYAAFGSEAKLTSAQLQTIALGLEASGLPFLWAFRP 116
SVVY +FGS A + + +A GL AS PFLW RP
Sbjct: 69 SVVYVSFGSLAAMDPHEFVELAWGLAASKRPFLWVVRP 182
Score = 24.9 bits (48), Expect(3) = 2e-022
Identities = 14/32 (43%), Positives = 16/32 (50%)
Frame = +1 / +1
Query: 94 RSSGHSGRQPTPHPDKARAGCLKASRSVSMAG 189
RSSG SG + + A SRSV MAG
Sbjct: 160 RSSGSSGPRSSAATSPASCPTGSTSRSVIMAG 255
>gb|CD491370.1|CD491370 WHE3085_F05_L09ZT CS wheat cold-stressed seedling subtracted cDNA
library Triticum aestivum cDNA clone WHE3085_F05_L09,
mRNA sequence
Length = 742
Score = 97.7 bits (207), Expect(2) = 2e-022
Identities = 38/71 (53%), Positives = 49/71 (69%)
Frame = +3 / -2
Query: 153 LPEGFEERVNGRGLVCRGWVPQPRLLAHESVGGFLTHAGWNSIAEGLSRGVTMVLLPLMF 332
L + FEERV RG+V RGW PQ +L H++VGGF+TH GWNS EG+ GV M+ P
Sbjct: 645 LADEFEERVKNRGMVIRGWAPQLMILQHQAVGGFVTHCGWNSTIEGICAGVPMITWPHFG 466
Query: 333 DQGLNARLLMD 365
+Q LN +LL+D
Sbjct: 465 EQFLNEKLLVD 433
Score = 28.6 bits (56), Expect(2) = 2e-022
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = +3 / -2
Query: 51 QLQTIALGLEASGLPFLWAFRPPA 122
QL + LGLE S PF+W + A
Sbjct: 741 QLVELGLGLETSRKPFIWVIKAGA 670
>emb|AX660822.1| Sequence 1179 from Patent WO03000906
Length = 789
Score = 92.7 bits (196), Expect(2) = 5e-022
Identities = 35/71 (49%), Positives = 49/71 (69%)
Frame = +3 / +1
Query: 153 LPEGFEERVNGRGLVCRGWVPQPRLLAHESVGGFLTHAGWNSIAEGLSRGVTMVLLPLMF 332
L +GFEERV RG++ RGW PQ +L H+++GGF+TH G NS EG+ GV M+ P
Sbjct: 172 LADGFEERVKDRGMIIRGWAPQVMILWHQAIGGFVTHCGCNSTIEGICAGVPMITWPHFA 351
Query: 333 DQGLNARLLMD 365
+Q LN +L++D
Sbjct: 352 EQFLNEKLVVD 384
Score = 32.2 bits (64), Expect(2) = 5e-022
Identities = 14/28 (50%), Positives = 19/28 (67%)
Frame = +3 / +3
Query: 3 SVVYAAFGSEAKLTSAQLQTIALGLEAS 86
SV++ +FGS A T Q+ + LGLEAS
Sbjct: 27 SVIFVSFGSLACTTPQQIVELGLGLEAS 110
>gb|CD868794.1|CD868794 AZO2.109N19R010328 AZO2 Triticum aestivum cDNA clone AZO2109N19,
mRNA sequence
Length = 625
Score = 74.8 bits (157), Expect(2) = 5e-022
Identities = 28/67 (41%), Positives = 43/67 (64%)
Frame = +3 / -3
Query: 165 FEERVNGRGLVCRGWVPQPRLLAHESVGGFLTHAGWNSIAEGLSRGVTMVLLPLMFDQGL 344
F +R RG V G++ Q +L H+SV GF TH GWNS+ E ++ GV ++ P+ +Q L
Sbjct: 470 FNQRFGDRGKVVEGFINQLGVLGHKSVKGFFTHCGWNSVLESITMGVPILAFPMAAEQKL 291
Query: 345 NARLLMD 365
NA+ ++D
Sbjct: 290 NAKFVVD 270
Score = 50.1 bits (103), Expect(2) = 5e-022
Identities = 20/35 (57%), Positives = 28/35 (80%)
Frame = +3 / -3
Query: 9 VYAAFGSEAKLTSAQLQTIALGLEASGLPFLWAFR 113
V AFGS+A+L+ AQL+ IA+GL++SG+ FLW R
Sbjct: 602 VDVAFGSQAELSRAQLEEIAVGLDSSGVDFLWVVR 498
>gb|BE585608.1|BE585608 EST#5T7_B10_b10_077 KSU wheat Fusarium graminearum infected spike
cDNA library Triticum aestivum cDNA clone
EST#5T7_B10_b10_077, mRNA sequence
Length = 716
Score = 67.0 bits (140), Expect(2) = 9e-022
Identities = 24/47 (51%), Positives = 33/47 (70%)
Frame = +3 / +3
Query: 156 PEGFEERVNGRGLVCRGWVPQPRLLAHESVGGFLTHAGWNSIAEGLS 296
P+G+E+RV RG++ R W +LAH +VG FLTH GWNSI E ++
Sbjct: 576 PKGWEKRVEDRGVIIRSWAXTTAILAHPAVGTFLTHCGWNSILEAVA 716
Score = 57.0 bits (118), Expect(2) = 9e-022
Identities = 26/47 (55%), Positives = 31/47 (65%)
Frame = +3 / +3
Query: 3 SVVYAAFGSEAKLTSAQLQTIALGLEASGLPFLWAFRPPADAAPGQG 143
SVVY +FGS A ++ AQL +ALGLEAS PFLWA R P +G
Sbjct: 444 SVVYVSFGSCALVSHAQLDQLALGLEASXKPFLWAVRAAEKWTPPKG 584
>gb|BM137436.1|BM137436 WHE0475_B01_C01ZS Wheat Fusarium graminearum infected spike cDNA
library Triticum aestivum cDNA clone WHE0475_B01_C01,
mRNA sequence
Length = 522
Score = 80.3 bits (169), Expect(2) = 4e-021
Identities = 30/58 (51%), Positives = 39/58 (67%)
Frame = +3 / +3
Query: 153 LPEGFEERVNGRGLVCRGWVPQPRLLAHESVGGFLTHAGWNSIAEGLSRGVTMVLLPL 326
LP GF +R G GLV + WVPQ +L H + G F+TH GWNS+ EG++ GV M+ PL
Sbjct: 339 LPNGFLDRTRGCGLVVKQWVPQADVLHHRATGAFVTHCGWNSVLEGVTAGVPMLCWPL 512
Score = 41.4 bits (84), Expect(2) = 4e-021
Identities = 18/39 (46%), Positives = 24/39 (61%)
Frame = +3 / +3
Query: 3 SVVYAAFGSEAKLTSAQLQTIALGLEASGLPFLWAFRPP 119
SVV+ FGS ++ Q++ IA+GLE SG FLW P
Sbjct: 192 SVVFLCFGSAGNHSAEQIKEIAVGLENSGHRFLWVVGNP 308
>gb|CK205858.1|CK205858 FGAS017406 Triticum aestivum FGAS: Library 5 GATE 7 Triticum
aestivum cDNA, mRNA sequence
Length = 1110
Score = 84.0 bits (177), Expect(2) = 8e-021
Identities = 36/67 (53%), Positives = 43/67 (64%)
Frame = +3 / -1
Query: 156 PEGFEERVNGRGLVCRGWVPQPRLLAHESVGGFLTHAGWNSIAEGLSRGVTMVLLPLMFD 335
P GF R GRG+V GWV Q +L H SVG F+ HAG +S+ EGL G +VLLP+ D
Sbjct: 546 PPGFAGRTKGRGVVHTGWVQQQHILRHRSVGCFVNHAGLSSVVEGLVAGCRLVLLPMKGD 367
Query: 336 QGLNARL 356
Q LNA L
Sbjct: 366 QYLNAAL 346
Score = 36.8 bits (74), Expect(2) = 8e-021
Identities = 17/49 (34%), Positives = 26/49 (53%)
Frame = +3 / -3
Query: 3 SVVYAAFGSEAKLTSAQLQTIALGLEASGLPFLWAFRPPADAAPGQGTG 149
+VV+A+FG+E L +A + LGLE++ PF P +G G
Sbjct: 703 AVVFASFGNETFLPAAAATELLLGLESTNRPFFVVLNFPKGHGHRRGAG 557
Database: Triticum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 3:01 PM
Number of letters in database: 367,240,239
Number of sequences in database: 636,343
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 716,991,102
Number of Sequences: 636343
Number of extensions: 14885701
Number of successful extensions: 273545
Number of sequences better than 1.0e-020: 53
length of database: 122,413,413
effective HSP length: 53
effective length of database: 88,687,234
effective search space used: 14810768078
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)