TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3670899.2.1
(555 letters)
Database: Triticum_nucl_with_EST.fasta
636,343 sequences; 367,240,239 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BG908265.1|BG908265 TaLr1166H01F TaLr1 Triticum aestivum... 312 2e-084
gb|BQ171296.1|BQ171296 WHE2348_A05_B10ZT Wheat pre-anthesis... 279 2e-074
gb|CK199494.1|CK199494 FGAS007994 Triticum aestivum FGAS: L... 259 2e-068
gb|BJ258792.1|BJ258792 BJ258792 Y. Ogihara unpublished cDNA... 236 4e-062
gb|CA641288.1|CA641288 wre1n.pk0043.h2 wre1n Triticum aesti... 228 4e-059
gb|CA661376.1|CA661376 wlmk1.pk0005.a8 wlmk1 Triticum aesti... 217 9e-056
gb|CA682807.1|CA682807 wlm96.pk0006.b3 wlm96 Triticum aesti... 181 7e-045
gb|BQ903932.1|BQ903932 Ta03_16g05_R Ta03_AAFC_ECORC_Fusariu... 120 6e-041
gb|BT009236.1| Triticum aestivum clone wle1n.pk0109.e10:fis... 98 1e-036
gb|BJ320027.1|BJ320027 BJ320027 Y. Ogihara unpublished cDNA... 77 2e-029
gb|AL810110.1|AL810110 AL810110 d:15 Triticum aestivum cDNA... 96 3e-024
gb|CA687551.1|CA687551 wlm96.pk038.n7 wlm96 Triticum aestiv... 56 4e-022
gb|AL819732.1|AL819732 AL819732 n:129 Triticum aestivum cDN... 95 1e-021
>gb|BG908265.1|BG908265 TaLr1166H01F TaLr1 Triticum aestivum cDNA clone TaLr1166H01 3',
mRNA sequence
Length = 633
Score = 312 bits (676), Expect = 2e-084
Identities = 121/148 (81%), Positives = 133/148 (89%)
Frame = -3 / -3
Query: 541 GMYYESPTKSGEIVAVFQPSHEEQQQYTSNDHNQKALAEIYLLSYCDKITMSAWSTFGYV 362
GMYYE+PTK+GEIVAV+QPSHEE+Q+Y SN+HNQKALAEIYLLSYCDKI MSAWSTFGYV
Sbjct: 586 GMYYENPTKTGEIVAVYQPSHEEKQEYASNEHNQKALAEIYLLSYCDKIAMSAWSTFGYV 407
Query: 361 AYSFAGVKPWILIRPDWNRETSDVACVRSTSVEPCLHSPPILGCRAKTDVDVAAVKPYVR 182
AY FAGVKPWIL+RPDWN+E SDVACVRSTSVEPCLHSPPILGCRAK +VDVA VKPYVR
Sbjct: 406 AYGFAGVKPWILLRPDWNKEVSDVACVRSTSVEPCLHSPPILGCRAKKEVDVARVKPYVR 227
Query: 181 HCEDVGFGLKLFDS*LSQWTYSSTIQLF 98
HCEDVGFGLK+F S* W+Y +F
Sbjct: 226 HCEDVGFGLKMFGS*TMTWSYK*GFSVF 143
Score = 244 bits (528), Expect = 5e-064
Identities = 110/135 (81%), Positives = 113/135 (83%)
Frame = +3 / +3
Query: 138 *LSNNLRPKPTSSQCRTYGLTAATSTSVLALHPRIGGECRHGSTDVDRTHATSEVSLFQS 317
*L N LRP PTSSQCRT GLT ATSTS LA HP IGGECRHGSTDVDRT ATS+ SLFQS
Sbjct: 183 *LPNILRPNPTSSQCRT*GLTRATSTSFLARHPSIGGECRHGSTDVDRTQATSDTSLFQS 362
Query: 318 GRIRIHGFTPAKLYAT*PKVDQALIVILSQ*LSR*ISASAFWLWSLDVYCCCSSWLGWNT 497
GR RI G TPAK AT*PKVDQAL+ ILSQ*LSR*ISASAFWL SLD Y C SSWLGW T
Sbjct: 363 GRSRIQGLTPAKP*AT*PKVDQALMAILSQ*LSR*ISASAFWLCSLDAYSCFSSWLGWYT 542
Query: 498 ATISPLLVGLS*YMP 542
ATISP+LVG S*YMP
Sbjct: 543 ATISPVLVGFS*YMP 587
Score = 161 bits (346), Expect(2) = 7e-053
Identities = 73/99 (73%), Positives = 78/99 (78%)
Frame = +2 / +2
Query: 119 VRPLRELAIEQLEAEADVLAVPDVRLDSGDVDVRLGPAPEDRRRVQARLHGRGPDARDVG 298
+ P LA E LEAE DVLAV DV LD+G V + LGPAPE RRRVQARL GRGPDA DVG
Sbjct: 164 IAPCHCLATEHLEAEPDVLAVSDVGLDAGHVHLLLGPAPEYRRRVQARLDGRGPDAGDVG 343
Query: 299 GLPVPVRPDQDPRLHAGEAVRDVAEGGPGAHRDLVAVAE 415
L VPVRP+QDP L AGEAV D+AEGGPGAH DLVAVAE
Sbjct: 344 HLLVPVRPEQDPGLDAGEAVGDIAEGGPGAHGDLVAVAE 460
Score = 97.3 bits (206), Expect(3) = 1e-034
Identities = 40/51 (78%), Positives = 42/51 (82%)
Frame = -2 / -2
Query: 539 HVLREPHQEWGDRGGVPAQPRGAAAVHVQRPQPEGAGRDLPAQLLRQDHDE 387
HVLREP Q+ GDRGGVPA+PRG A V VQR QPEGAG DLPAQLLRQD E
Sbjct: 584 HVLREPDQDGGDRGGVPAEPRGEAGVRVQRAQPEGAGGDLPAQLLRQDRHE 432
Score = 66.6 bits (139), Expect(2) = 7e-053
Identities = 25/32 (78%), Positives = 26/32 (81%)
Frame = +1 / +1
Query: 445 CGRWTCTAAAPRGWAGTPPRSPHSWWGSRSTC 540
C RWT T A+PRG AGTPPRSP SW GSRSTC
Sbjct: 490 CARWTRTPASPRGSAGTPPRSPPSWSGSRSTC 585
Score = 63.8 bits (133), Expect(3) = 1e-034
Identities = 26/33 (78%), Positives = 30/33 (90%)
Frame = -2 / -2
Query: 341 EAVDPDPAGLEQGDLRRRVRPVHVRGAVPALAA 243
+A+DP PAGLEQG +RRR+RPVHVR AVPALAA
Sbjct: 386 QALDPAPAGLEQGGVRRRLRPVHVRRAVPALAA 288
Score = 24.0 bits (46), Expect(3) = 1e-034
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = -2 / -2
Query: 173 GRRLRPQVVR*LTLSVDV 120
GRR+RPQ VR*L +++
Sbjct: 218 GRRVRPQDVR*LNNDMEL 165
>gb|BQ171296.1|BQ171296 WHE2348_A05_B10ZT Wheat pre-anthesis spike cDNA library Triticum
aestivum cDNA clone WHE2348_A05_B10, mRNA sequence
Length = 547
Score = 279 bits (603), Expect = 2e-074
Identities = 108/134 (80%), Positives = 118/134 (88%)
Frame = -3 / -3
Query: 499 AVFQPSHEEQQQYTSNDHNQKALAEIYLLSYCDKITMSAWSTFGYVAYSFAGVKPWILIR 320
AV+QPSHEE+Q+Y SN+HNQKALAE YLLSYCDKI MSAWSTFGYVAY FAGVKPWIL+R
Sbjct: 545 AVYQPSHEEKQEYASNEHNQKALAEXYLLSYCDKIAMSAWSTFGYVAYGFAGVKPWILLR 366
Query: 319 PDWNRETSDVACVRSTSVEPCLHSPPILGCRAKTDVDVAAVKPYVRHCEDVGFGLKLFDS 140
PDWN+E SDVACVRSTSVEPCLHSPPILGCRAK +VDVA VKPYVRHCEDVGFGLK+F S
Sbjct: 365 PDWNKEVSDVACVRSTSVEPCLHSPPILGCRAKKEVDVARVKPYVRHCEDVGFGLKMFGS 186
Query: 139 *LSQWTYSSTIQLF 98
* W+Y +F
Sbjct: 185 *TMTWSYK*GFSVF 144
Score = 215 bits (464), Expect = 3e-055
Identities = 97/121 (80%), Positives = 99/121 (81%)
Frame = +3 / +1
Query: 138 *LSNNLRPKPTSSQCRTYGLTAATSTSVLALHPRIGGECRHGSTDVDRTHATSEVSLFQS 317
*L N LRP PTSSQCRT GLT ATSTS LA HP IGGECRHGSTDVDRT ATS+ SLFQS
Sbjct: 184 *LPNILRPNPTSSQCRT*GLTRATSTSFLARHPSIGGECRHGSTDVDRTQATSDTSLFQS 363
Query: 318 GRIRIHGFTPAKLYAT*PKVDQALIVILSQ*LSR*ISASAFWLWSLDVYCCCSSWLGWNT 497
GR RI G TPAK AT*PKVDQAL+ ILSQ*LSR ISASAFWL SLD Y C SSWLGW T
Sbjct: 364 GRSRIQGLTPAKP*AT*PKVDQALMAILSQ*LSRXISASAFWLCSLDAYSCFSSWLGWYT 543
Query: 498 A 500
A
Sbjct: 544 A 546
Score = 161 bits (346), Expect(2) = 9e-045
Identities = 73/99 (73%), Positives = 78/99 (78%)
Frame = +2 / +3
Query: 119 VRPLRELAIEQLEAEADVLAVPDVRLDSGDVDVRLGPAPEDRRRVQARLHGRGPDARDVG 298
+ P LA E LEAE DVLAV DV LD+G V + LGPAPE RRRVQARL GRGPDA DVG
Sbjct: 165 IAPCHCLATEHLEAEPDVLAVSDVGLDAGHVHLLLGPAPEYRRRVQARLDGRGPDAGDVG 344
Query: 299 GLPVPVRPDQDPRLHAGEAVRDVAEGGPGAHRDLVAVAE 415
L VPVRP+QDP L AGEAV D+AEGGPGAH DLVAVAE
Sbjct: 345 HLLVPVRPEQDPGLDAGEAVGDIAEGGPGAHGDLVAVAE 461
Score = 70.3 bits (147), Expect(3) = 1e-026
Identities = 29/38 (76%), Positives = 30/38 (78%)
Frame = -2 / -2
Query: 500 GGVPAQPRGAAAVHVQRPQPEGAGRDLPAQLLRQDHDE 387
GGVPA+PRG A V VQR QPEGAG D PAQLLRQD E
Sbjct: 546 GGVPAEPRGEAGVRVQRAQPEGAGGDXPAQLLRQDRHE 433
Score = 63.8 bits (133), Expect(3) = 1e-026
Identities = 26/33 (78%), Positives = 30/33 (90%)
Frame = -2 / -2
Query: 341 EAVDPDPAGLEQGDLRRRVRPVHVRGAVPALAA 243
+A+DP PAGLEQG +RRR+RPVHVR AVPALAA
Sbjct: 387 QALDPAPAGLEQGGVRRRLRPVHVRRAVPALAA 289
Score = 39.6 bits (80), Expect(2) = 9e-045
Identities = 14/19 (73%), Positives = 15/19 (78%)
Frame = +1 / +2
Query: 445 CGRWTCTAAAPRGWAGTPP 501
C RWT T A+PRG AGTPP
Sbjct: 491 CARWTRTPASPRGSAGTPP 547
Score = 24.0 bits (46), Expect(3) = 1e-026
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = -2 / -2
Query: 173 GRRLRPQVVR*LTLSVDV 120
GRR+RPQ VR*L +++
Sbjct: 219 GRRVRPQDVR*LNNDMEL 166
>gb|CK199494.1|CK199494 FGAS007994 Triticum aestivum FGAS: Library 3 Gate 6 Triticum
aestivum cDNA, mRNA sequence
Length = 855
Score = 259 bits (560), Expect = 2e-068
Identities = 101/130 (77%), Positives = 111/130 (85%)
Frame = -3 / -1
Query: 487 PSHEEQQQYTSNDHNQKALAEIYLLSYCDKITMSAWSTFGYVAYSFAGVKPWILIRPDWN 308
P+ E+ + SN+HNQKALAEIYLLSYCDKI MSAWSTFGYVAY FAGVKPWIL+RPDWN
Sbjct: 660 PASHERSRVRSNEHNQKALAEIYLLSYCDKIAMSAWSTFGYVAYGFAGVKPWILLRPDWN 481
Query: 307 RETSDVACVRSTSVEPCLHSPPILGCRAKTDVDVAAVKPYVRHCEDVGFGLKLFDS*LSQ 128
+E SDVACVRSTSVEPCLHSPPILGCRAK +VDVA VKPYVRHCEDVGFGLK+F S*
Sbjct: 480 KEVSDVACVRSTSVEPCLHSPPILGCRAKKEVDVARVKPYVRHCEDVGFGLKMFGS*TMT 301
Query: 127 WTYSSTIQLF 98
W+Y +F
Sbjct: 300 WSYK*GFSVF 271
Score = 188 bits (405), Expect = 4e-047
Identities = 87/107 (81%), Positives = 90/107 (84%)
Frame = +3 / +2
Query: 138 *LSNNLRPKPTSSQCRTYGLTAATSTSVLALHPRIGGECRHGSTDVDRTHATSEVSLFQS 317
*L N LRP PTSSQCRT GLT ATSTS LA HP IGGECRHGSTDVDRT ATS+ SLFQS
Sbjct: 311 *LPNILRPNPTSSQCRT*GLTRATSTSFLARHPSIGGECRHGSTDVDRTQATSDTSLFQS 490
Query: 318 GRIRIHGFTPAKLYAT*PKVDQALIVILSQ*LSR*ISASAFWLWSLD 458
GR RI G TPAK AT*PKVDQAL+ ILSQ*LSR*ISASAFWL SL+
Sbjct: 491 GRSRIQGLTPAKP*AT*PKVDQALMAILSQ*LSR*ISASAFWLCSLE 631
Score = 161 bits (346), Expect = 6e-039
Identities = 73/99 (73%), Positives = 78/99 (78%)
Frame = +2 / +1
Query: 119 VRPLRELAIEQLEAEADVLAVPDVRLDSGDVDVRLGPAPEDRRRVQARLHGRGPDARDVG 298
+ P LA E LEAE DVLAV DV LD+G V + LGPAPE RRRVQARL GRGPDA DVG
Sbjct: 292 IAPCHCLATEHLEAEPDVLAVSDVGLDAGHVHLLLGPAPEYRRRVQARLDGRGPDAGDVG 471
Query: 299 GLPVPVRPDQDPRLHAGEAVRDVAEGGPGAHRDLVAVAE 415
L VPVRP+QDP L AGEAV D+AEGGPGAH DLVAVAE
Sbjct: 472 HLLVPVRPEQDPGLDAGEAVGDIAEGGPGAHGDLVAVAE 588
>gb|BJ258792.1|BJ258792 BJ258792 Y. Ogihara unpublished cDNA library, Wh_h Triticum
aestivum cDNA clone whh9j01 5', mRNA sequence
Length = 656
Score = 236 bits (509), Expect(2) = 4e-062
Identities = 90/102 (88%), Positives = 98/102 (96%)
Frame = -3 / +2
Query: 541 GMYYESPTKSGEIVAVFQPSHEEQQQYTSNDHNQKALAEIYLLSYCDKITMSAWSTFGYV 362
G+YYESPTK+GEIVAV+QPSHEE+Q+Y SN+HNQKALAEIYLLSYCDKI MSAWSTFGYV
Sbjct: 320 GLYYESPTKTGEIVAVYQPSHEEKQEYASNEHNQKALAEIYLLSYCDKIAMSAWSTFGYV 499
Query: 361 AYSFAGVKPWILIRPDWNRETSDVACVRSTSVEPCLHSPPIL 236
AY FAGVKPWIL+RPDWN+E SDVACVRSTSVEPCLHSPPIL
Sbjct: 500 AYGFAGVKPWILLRPDWNKEVSDVACVRSTSVEPCLHSPPIL 625
Score = 187 bits (403), Expect = 8e-047
Identities = 83/101 (82%), Positives = 86/101 (85%)
Frame = +3 / -3
Query: 240 IGGECRHGSTDVDRTHATSEVSLFQSGRIRIHGFTPAKLYAT*PKVDQALIVILSQ*LSR 419
IGGECRHGSTDVDRTHATS+ SLFQSGR RIHG TPAK AT PKVDQAL+ ILSQ*L R
Sbjct: 621 IGGECRHGSTDVDRTHATSDTSLFQSGRSRIHGLTPAKP*ATYPKVDQALMAILSQ*LRR 442
Query: 420 *ISASAFWLWSLDVYCCCSSWLGWNTATISPLLVGLS*YMP 542
*ISASAFWL SLD Y C SSWLGW TATISP+LVGLS* P
Sbjct: 441 *ISASAFWLCSLDAYSCFSSWLGWYTATISPVLVGLS**RP 319
Score = 147 bits (316), Expect = 8e-035
Identities = 66/98 (67%), Positives = 71/98 (72%)
Frame = -2 / +1
Query: 536 VLREPHQEWGDRGGVPAQPRGAAAVHVQRPQPEGAGRDLPAQLLRQDHDEXXXXXXXXXX 357
+LREP Q+ GDRGGVPA+PRG A V VQR QPEGAGRDLP QLLRQD E
Sbjct: 325 LLREPDQDGGDRGGVPAEPRGEAGVRVQRAQPEGAGRDLPPQLLRQDRHERLVHLRVRRL 504
Query: 356 XXXXREAVDPDPAGLEQGDLRRRVRPVHVRGAVPALAA 243
R+AVDP P GLEQG +RRRVRPVHVR AVPALAA
Sbjct: 505 RLRRRQAVDPAPPGLEQGGVRRRVRPVHVRRAVPALAA 618
Score = 114 bits (243), Expect(2) = 8e-037
Identities = 50/61 (81%), Positives = 52/61 (85%)
Frame = +2 / -2
Query: 233 PEDRRRVQARLHGRGPDARDVGGLPVPVRPDQDPRLHAGEAVRDVAEGGPGAHRDLVAVA 412
P+ RRRVQARL GRGPDARDVG L VPVR +QDPRL AGEAV DV EGGPGAH DLVAVA
Sbjct: 628 PKYRRRVQARLDGRGPDARDVGHLLVPVRAEQDPRLDAGEAVGDVPEGGPGAHGDLVAVA 449
Query: 413 E 415
E
Sbjct: 448 E 446
Score = 60.2 bits (125), Expect(2) = 8e-037
Identities = 23/30 (76%), Positives = 24/30 (80%)
Frame = +1 / -1
Query: 445 CGRWTCTAAAPRGWAGTPPRSPHSWWGSRS 534
C RWT T A+PRG AGTPPRSP SW GSRS
Sbjct: 416 CARWTRTPASPRGSAGTPPRSPPSWSGSRS 327
Score = 23.1 bits (44), Expect(2) = 4e-062
Identities = 8/10 (80%), Positives = 9/10 (90%)
Frame = -3 / +3
Query: 235 GCRAKTDVDV 206
GCRAK +VDV
Sbjct: 627 GCRAKKEVDV 656
>gb|CA641288.1|CA641288 wre1n.pk0043.h2 wre1n Triticum aestivum cDNA clone wre1n.pk0043.h2
5' end, mRNA sequence
Length = 388
Score = 228 bits (492), Expect = 4e-059
Identities = 89/97 (91%), Positives = 92/97 (94%)
Frame = -3 / +3
Query: 427 EIYLLSYCDKITMSAWSTFGYVAYSFAGVKPWILIRPDWNRETSDVACVRSTSVEPCLHS 248
EIYLLSYCDKI MSAWSTFGYVAY FAGVKPWIL+RPDWN+E SDVACVRSTSVEPCLHS
Sbjct: 3 EIYLLSYCDKIAMSAWSTFGYVAYGFAGVKPWILLRPDWNKEVSDVACVRSTSVEPCLHS 182
Query: 247 PPILGCRAKTDVDVAAVKPYVRHCEDVGFGLKLFDS* 137
PPILGCRAK +VDVA VKPYVRHCEDVGFGLKLFDS*
Sbjct: 183 PPILGCRAKKEVDVARVKPYVRHCEDVGFGLKLFDS* 293
Score = 179 bits (386), Expect = 2e-044
Identities = 80/97 (82%), Positives = 83/97 (85%)
Frame = +3 / -1
Query: 138 *LSNNLRPKPTSSQCRTYGLTAATSTSVLALHPRIGGECRHGSTDVDRTHATSEVSLFQS 317
*LSN+LRP PTSSQCRTYGLT ATSTS A HP IGGECRHGSTDVDRTHATS+ SLFQS
Sbjct: 292 *LSNSLRPNPTSSQCRTYGLTRATSTSFFARHPSIGGECRHGSTDVDRTHATSDTSLFQS 113
Query: 318 GRIRIHGFTPAKLYAT*PKVDQALIVILSQ*LSR*IS 428
GR RIHG TPAK AT PKVDQAL+ ILSQ*L R*IS
Sbjct: 112 GRSRIHGLTPAKP*ATYPKVDQALMAILSQ*LRR*IS 2
Score = 167 bits (360), Expect = 7e-041
Identities = 76/93 (81%), Positives = 79/93 (84%)
Frame = +2 / -3
Query: 137 LAIEQLEAEADVLAVPDVRLDSGDVDVRLGPAPEDRRRVQARLHGRGPDARDVGGLPVPV 316
LAIEQLEAE DVLAVPDVRLD+G V + L PAPE RRRVQARL GRGPDARDVG L VPV
Sbjct: 293 LAIEQLEAEPDVLAVPDVRLDAGHVHLLLCPAPEYRRRVQARLDGRGPDARDVGHLLVPV 114
Query: 317 RPDQDPRLHAGEAVRDVAEGGPGAHRDLVAVAE 415
R +QDPRL AGEAV DV EGGPGAH DLVAVAE
Sbjct: 113 RAEQDPRLDAGEAVGDVPEGGPGAHGDLVAVAE 15
>gb|CA661376.1|CA661376 wlmk1.pk0005.a8 wlmk1 Triticum aestivum cDNA clone wlmk1.pk0005.a8
5' end, mRNA sequence
Length = 367
Score = 217 bits (468), Expect = 9e-056
Identities = 84/92 (91%), Positives = 87/92 (94%)
Frame = -3 / +3
Query: 412 SYCDKITMSAWSTFGYVAYSFAGVKPWILIRPDWNRETSDVACVRSTSVEPCLHSPPILG 233
SYCDKI MSAWSTFGYVAY FAGVKPWIL+RPDWN+E SDVACVRSTSVEPCLHSPPILG
Sbjct: 3 SYCDKIAMSAWSTFGYVAYGFAGVKPWILLRPDWNKEVSDVACVRSTSVEPCLHSPPILG 182
Query: 232 CRAKTDVDVAAVKPYVRHCEDVGFGLKLFDS* 137
CRAK +VDVA VKPYVRHCEDVGFGLKLFDS*
Sbjct: 183 CRAKKEVDVARVKPYVRHCEDVGFGLKLFDS* 278
Score = 173 bits (373), Expect = 1e-042
Identities = 76/92 (82%), Positives = 79/92 (85%)
Frame = +3 / -1
Query: 138 *LSNNLRPKPTSSQCRTYGLTAATSTSVLALHPRIGGECRHGSTDVDRTHATSEVSLFQS 317
*LSN+LRP PTSSQCRTYGLT ATSTS A HP IGGECRHGSTDVDRTHATS+ SLFQS
Sbjct: 277 *LSNSLRPNPTSSQCRTYGLTRATSTSFFARHPSIGGECRHGSTDVDRTHATSDTSLFQS 98
Query: 318 GRIRIHGFTPAKLYAT*PKVDQALIVILSQ*L 413
GR RIHG TPAK AT PKVDQAL+ ILSQ*L
Sbjct: 97 GRSRIHGLTPAKP*ATYPKVDQALMAILSQ*L 2
Score = 165 bits (355), Expect = 3e-040
Identities = 75/92 (81%), Positives = 78/92 (84%)
Frame = +2 / -3
Query: 137 LAIEQLEAEADVLAVPDVRLDSGDVDVRLGPAPEDRRRVQARLHGRGPDARDVGGLPVPV 316
LAIEQLEAE DVLAVPDVRLD+G V + L PAPE RRRVQARL GRGPDARDVG L VPV
Sbjct: 278 LAIEQLEAEPDVLAVPDVRLDAGHVHLLLCPAPEYRRRVQARLDGRGPDARDVGHLLVPV 99
Query: 317 RPDQDPRLHAGEAVRDVAEGGPGAHRDLVAVA 412
R +QDPRL AGEAV DV EGGPGAH DLVAVA
Sbjct: 98 RAEQDPRLDAGEAVGDVPEGGPGAHGDLVAVA 3
>gb|CA682807.1|CA682807 wlm96.pk0006.b3 wlm96 Triticum aestivum cDNA clone wlm96.pk0006.b3
5' end, mRNA sequence
Length = 434
Score = 181 bits (389), Expect = 7e-045
Identities = 70/86 (81%), Positives = 75/86 (87%)
Frame = -3 / +2
Query: 490 QPSHEEQQQYTSNDHNQKALAEIYLLSYCDKITMSAWSTFGYVAYSFAGVKPWILIRPDW 311
QPSHEE+Q+Y SN+HNQKALAEIYLLSYCDKI MSAWSTFG VAY FAGV PW L+RPDW
Sbjct: 2 QPSHEEKQEYASNEHNQKALAEIYLLSYCDKIAMSAWSTFGXVAYGFAGVXPWXLLRPDW 181
Query: 310 NRETSDVACVRSTSVEPCLHSPPILG 233
N+E SDVACVRS SVEP LHSPP G
Sbjct: 182 NKEVSDVACVRSKSVEPXLHSPPYSG 259
Score = 154 bits (330), Expect = 1e-036
Identities = 66/86 (76%), Positives = 68/86 (79%)
Frame = +3 / -3
Query: 234 PRIGGECRHGSTDVDRTHATSEVSLFQSGRIRIHGFTPAKLYAT*PKVDQALIVILSQ*L 413
P GGEC HGSTD DRTHATS+ SLFQSGR HG TPAK AT PKVDQAL+ ILSQ*L
Sbjct: 258 PEYGGECXHGSTDXDRTHATSDTSLFQSGRSXXHGLTPAKP*ATYPKVDQALMAILSQ*L 79
Query: 414 SR*ISASAFWLWSLDVYCCCSSWLGW 491
R*ISASAFWL SLD Y C SSWLGW
Sbjct: 78 RR*ISASAFWLCSLDAYSCFSSWLGW 1
Score = 92.7 bits (196), Expect(2) = 7e-021
Identities = 42/58 (72%), Positives = 43/58 (74%)
Frame = +2 / -2
Query: 242 RRRVQARLHGRGPDARDVGGLPVPVRPDQDPRLHAGEAVRDVAEGGPGAHRDLVAVAE 415
RRRVQ RL PDARDVG L VPVR +Q PR AGEAV D EGGPGAH DLVAVAE
Sbjct: 250 RRRVQXRLDXLXPDARDVGHLLVPVRAEQXPRXDAGEAVGDXPEGGPGAHGDLVAVAE 77
Score = 28.1 bits (55), Expect(2) = 7e-021
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = +1 / -1
Query: 445 CGRWTCTAAAPRGWA 489
C RWT T A+PRG A
Sbjct: 47 CARWTRTPASPRGSA 3
>gb|BQ903932.1|BQ903932 Ta03_16g05_R
Ta03_AAFC_ECORC_Fusarium_graminearum_inoculated_wheat_he
ads Triticum aestivum cDNA clone Ta03_16g05, mRNA
sequence
Length = 302
Score = 120 bits (257), Expect(3) = 6e-041
Identities = 45/54 (83%), Positives = 50/54 (92%)
Frame = -3 / -2
Query: 352 FAGVKPWILIRPDWNRETSDVACVRSTSVEPCLHSPPILGCRAKTDVDVAAVKP 191
FAGVKPWIL+RPDW++E SDV CVRSTSVEPCLHSPPILGCRA+ +VDVA VKP
Sbjct: 163 FAGVKPWILLRPDWDKEMSDVVCVRSTSVEPCLHSPPILGCRAREEVDVARVKP 2
Score = 111 bits (237), Expect(3) = 2e-035
Identities = 45/54 (83%), Positives = 48/54 (88%)
Frame = +3 / +3
Query: 192 GLTAATSTSVLALHPRIGGECRHGSTDVDRTHATSEVSLFQSGRIRIHGFTPAK 353
GLT ATSTS LA HPR+GGECRHGSTDVDRTH TS++SL QSGR RIHGFTPAK
Sbjct: 3 GLTRATSTSSLARHPRMGGECRHGSTDVDRTHTTSDISLSQSGRSRIHGFTPAK 164
Score = 100 bits (214), Expect(2) = 1e-022
Identities = 42/54 (77%), Positives = 46/54 (85%)
Frame = +2 / +2
Query: 191 RLDSGDVDVRLGPAPEDRRRVQARLHGRGPDARDVGGLPVPVRPDQDPRLHAGE 352
RLD+G VD+ PAPED RRVQARLHGRGPDA DVG L VPVRP+QDPRL+AGE
Sbjct: 2 RLDTGHVDLLPRPAPEDGRRVQARLHGRGPDAHDVGHLLVPVRPEQDPRLYAGE 163
Score = 64.8 bits (135), Expect(3) = 6e-041
Identities = 25/30 (83%), Positives = 26/30 (86%)
Frame = -3 / -1
Query: 457 SNDHNQKALAEIYLLSYCDKITMSAWSTFG 368
SN+HNQKALAEIYLLSYCDKI S WST G
Sbjct: 266 SNEHNQKALAEIYLLSYCDKIVTSTWSTXG 177
Score = 52.8 bits (109), Expect(3) = 2e-035
Identities = 24/30 (80%), Positives = 26/30 (86%)
Frame = +3 / +1
Query: 369 PKVDQALIVILSQ*LSR*ISASAFWLWSLD 458
P VDQ L+ ILSQ*LSR*ISASAFWL SL+
Sbjct: 178 PXVDQVLVTILSQ*LSR*ISASAFWLCSLE 267
Score = 24.9 bits (48), Expect(2) = 1e-022
Identities = 10/13 (76%), Positives = 10/13 (76%)
Frame = +2 / +3
Query: 377 GPGAHRDLVAVAE 415
GPGA D VAVAE
Sbjct: 186 GPGARDDFVAVAE 224
Score = 21.2 bits (40), Expect(3) = 2e-035
Identities = 6/6 (100%), Positives = 6/6 (100%)
Frame = +3 / +2
Query: 474 SSWLGW 491
SSWLGW
Sbjct: 284 SSWLGW 301
Score = 18.9 bits (35), Expect(3) = 6e-041
Identities = 6/7 (85%), Positives = 7/7 (100%)
Frame = -3 / -3
Query: 490 QPSHEEQ 470
QPSHEE+
Sbjct: 300 QPSHEEK 280
>gb|BT009236.1| Triticum aestivum clone wle1n.pk0109.e10:fis, full insert mRNA
sequence
Length = 1262
Score = 98.2 bits (208), Expect(2) = 1e-036
Identities = 41/74 (55%), Positives = 49/74 (66%)
Frame = -3 / +1
Query: 535 YYESPTKSGEIVAVFQPSHEEQQQYTSNDHNQKALAEIYLLSYCDKITMSAWSTFGYVAY 356
Y E T G V V+QPSHEE Q+ + HN KALAEIYLLS D + S +STFGYVA
Sbjct: 604 YSEHHTVDGTTVKVYQPSHEEYQKKKNRKHNMKALAEIYLLSMSDVLITSGFSTFGYVAQ 783
Query: 355 SFAGVKPWILIRPD 314
AG+ PWI+ RP+
Sbjct: 784 GLAGLTPWIMYRPE 825
Score = 75.8 bits (159), Expect(2) = 1e-036
Identities = 27/54 (50%), Positives = 34/54 (62%)
Frame = -3 / +1
Query: 310 NRETSDVACVRSTSVEPCLHSPPILGCRAKTDVDVAAVKPYVRHCEDVGFGLKL 149
N + C R+ S+EPC H P C+AK D D+ V PYVRHCEDV +GLK+
Sbjct: 826 NHVVPEPPCGRAMSIEPCFHQAPYFDCKAKRDADLGKVVPYVRHCEDVSWGLKI 987
Score = 74.4 bits (156), Expect(2) = 5e-024
Identities = 39/75 (52%), Positives = 47/75 (62%)
Frame = +3 / -1
Query: 315 SGRIRIHGFTPAKLYAT*PKVDQALIVILSQ*LSR*ISASAFWLWSLDVYCCCSSWLGWN 494
SG IHG PA+ AT*PKV++ L++ S LSR*ISASAF L L + SSWLGW
Sbjct: 824 SGLYMIHGVRPARPCAT*PKVEKPLVMSTSLMLSR*ISASAFMLCFLFFFFWYSSWLGW* 645
Query: 495 TATISPLLVGLS*YM 539
T T+ P V S Y+
Sbjct: 644 TFTVVPSTVWCSLYL 600
Score = 57.0 bits (118), Expect(2) = 5e-024
Identities = 26/53 (49%), Positives = 32/53 (60%)
Frame = +3 / -1
Query: 153 LRPKPTSSQCRTYGLTAATSTSVLALHPRIGGECRHGSTDVDRTHATSEVSLF 311
LRP+ TSSQC TYG T S S+LAL + G +HGS D+ R H S + F
Sbjct: 983 LRPQLTSSQCLTYGTTLPRSASLLALQSK*GAWWKHGSMDMARPHGGSGTTWF 825
>gb|BJ320027.1|BJ320027 BJ320027 Y. Ogihara unpublished cDNA library, Wh_yf Triticum
aestivum cDNA clone whyf13c22 3', mRNA sequence
Length = 699
Score = 77.1 bits (162), Expect(2) = 2e-029
Identities = 28/54 (51%), Positives = 34/54 (62%)
Frame = -3 / -2
Query: 310 NRETSDVACVRSTSVEPCLHSPPILGCRAKTDVDVAAVKPYVRHCEDVGFGLKL 149
N + C R+ S+EPC H P CRAK D D+ V PYVRHCEDV +GLK+
Sbjct: 356 NHVVPEPPCGRAMSIEPCFHQAPYFDCRAKRDADLGKVVPYVRHCEDVSWGLKI 195
Score = 72.1 bits (151), Expect(2) = 2e-029
Identities = 29/52 (55%), Positives = 36/52 (69%)
Frame = -3 / -2
Query: 469 QQYTSNDHNQKALAEIYLLSYCDKITMSAWSTFGYVAYSFAGVKPWILIRPD 314
Q+ + HN KALAEIYLLS D + S +STFGYVA AG+ PWI+ RP+
Sbjct: 512 QKKKNRKHNMKALAEIYLLSMSDVLITSGFSTFGYVAQGLAGLTPWIMYRPE 357
>gb|AL810110.1|AL810110 AL810110 d:15 Triticum aestivum cDNA clone C06_d15_plate_6, mRNA
sequence
Length = 390
Score = 96.4 bits (204), Expect(2) = 3e-024
Identities = 40/74 (54%), Positives = 52/74 (70%)
Frame = -3 / +1
Query: 535 YYESPTKSGEIVAVFQPSHEEQQQYTSNDHNQKALAEIYLLSYCDKITMSAWSTFGYVAY 356
YYE K G +V VFQPSHEE+Q HNQKALAEIYLLS+ D + + STFGY++
Sbjct: 52 YYEHAAKGGGMVGVFQPSHEERQIMGQRPHNQKALAEIYLLSFSDVLLTTGASTFGYMSS 231
Query: 355 SFAGVKPWILIRPD 314
S AG++P +L+ P+
Sbjct: 232 SLAGLRPTMLMIPE 273
Score = 35.4 bits (71), Expect(2) = 3e-024
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = -3 / +1
Query: 286 CVRSTSVEPCLHSPPILGCRAK 221
CVR+ S+EPC H P + CR K
Sbjct: 298 CVRAMSMEPCFHMMPDVECRGK 363
>gb|CA687551.1|CA687551 wlm96.pk038.n7 wlm96 Triticum aestivum cDNA clone wlm96.pk038.n7 5'
end, mRNA sequence
Length = 468
Score = 56.1 bits (116), Expect(3) = 4e-022
Identities = 20/37 (54%), Positives = 27/37 (72%)
Frame = -3 / -1
Query: 436 ALAEIYLLSYCDKITMSAWSTFGYVAYSFAGVKPWIL 326
AL+E+YLLS CD + +STFGYVA G++PWI+
Sbjct: 465 ALSEMYLLSTCDVFVTTGFSTFGYVAQGLGGIRPWIM 355
Score = 51.0 bits (105), Expect(3) = 4e-022
Identities = 18/28 (64%), Positives = 22/28 (78%)
Frame = -3 / -2
Query: 232 CRAKTDVDVAAVKPYVRHCEDVGFGLKL 149
C A+ DVDV V PYVRHCEDV +G+K+
Sbjct: 236 CTARRDVDVGKVVPYVRHCEDVSWGIKI 153
Score = 35.4 bits (71), Expect(3) = 4e-022
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = -3 / -1
Query: 307 RETSDVACVRSTSVEPCLHSP 245
+E + CVR+ SVEPC HSP
Sbjct: 312 KEVPEPPCVRAMSVEPCFHSP 250
>gb|AL819732.1|AL819732 AL819732 n:129 Triticum aestivum cDNA clone B11_n129_plate_4, mRNA
sequence
Length = 410
Score = 94.5 bits (200), Expect(2) = 1e-021
Identities = 40/74 (54%), Positives = 49/74 (66%)
Frame = -3 / +3
Query: 535 YYESPTKSGEIVAVFQPSHEEQQQYTSNDHNQKALAEIYLLSYCDKITMSAWSTFGYVAY 356
Y E T G V V+QPSHEE Q+ + HN KALAEIYLLS D + S +STFGYVA+
Sbjct: 120 YSEHHTVYGTTVKVYQPSHEEYQKKKNRKHNMKALAEIYLLSMSDVLITSGFSTFGYVAH 299
Query: 355 SFAGVKPWILIRPD 314
A + PWI+ RP+
Sbjct: 300 GLACLTPWIMYRPE 341
Score = 28.1 bits (55), Expect(2) = 1e-021
Identities = 9/23 (39%), Positives = 12/23 (52%)
Frame = -3 / +3
Query: 310 NRETSDVACVRSTSVEPCLHSPP 242
N + C R+ S+EPC H P
Sbjct: 342 NHVVPEPPCGRAMSIEPCFHQAP 410
Database: Triticum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 3:01 PM
Number of letters in database: 367,240,239
Number of sequences in database: 636,343
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 535,066,128
Number of Sequences: 636343
Number of extensions: 8282808
Number of successful extensions: 224240
Number of sequences better than 1.0e-020: 21
length of database: 122,413,413
effective HSP length: 52
effective length of database: 89,323,577
effective search space used: 11790712164
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)