TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3562100.2.1
(759 letters)
Database: Triticum_nucl_with_EST.fasta
636,343 sequences; 367,240,239 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BJ266775.1|BJ266775 BJ266775 Y. Ogihara unpublished cDNA... 229 2e-059
gb|CD868499.1|CD868499 AZO2.109B04F001114 AZO2 Triticum aes... 229 2e-059
gb|CD907174.1|CD907174 G468.106C13F010810 G468 Triticum aes... 229 2e-059
gb|CN011621.1|CN011621 WHE3886_D10_H20ZS Wheat Fusarium gra... 229 2e-059
gb|CD868500.1|CD868500 AZO2.109B04R010328 AZO2 Triticum aes... 228 5e-059
gb|CF133714.1|CF133714 WHE4362_D10_H20ZT Wheat meiotic flor... 223 2e-057
gb|BJ307537.1|BJ307537 BJ307537 Y. Ogihara unpublished cDNA... 194 1e-048
gb|BJ214052.1|BJ214052 BJ214052 Y. Ogihara unpublished cDNA... 170 2e-041
gb|BJ221532.1|BJ221532 BJ221532 Y. Ogihara unpublished cDNA... 170 2e-041
gb|CA743035.1|CA743035 wri1s.pk002.e9 wri1s Triticum aestiv... 169 3e-041
gb|CD900181.1|CD900181 G174.114L13F010824 G174 Triticum aes... 169 3e-041
gb|CA719172.1|CA719172 wkm2n.pk003.b11 wkm2n Triticum aesti... 168 8e-041
gb|BQ294965.1|BQ294965 WHE2856_F10_K20ZS Wheat unstressed r... 156 2e-037
gb|BJ258298.1|BJ258298 BJ258298 Y. Ogihara unpublished cDNA... 150 2e-035
gb|CV759008.1|CV759008 FGAS053390 Triticum aestivum FGAS: L... 145 4e-034
gb|CV764611.1|CV764611 FGAS058996 Triticum aestivum FGAS: L... 141 8e-033
gb|BJ276695.1|BJ276695 BJ276695 Y. Ogihara unpublished cDNA... 88 3e-030
gb|CV779982.1|CV779982 FGAS074391 Triticum aestivum FGAS: L... 127 2e-028
gb|CA610303.1|CA610303 wr1.pk0117.g11 wr1 Triticum aestivum... 121 4e-028
gb|CD905162.1|CD905162 G468.100L17F010614 G468 Triticum aes... 110 3e-023
gb|CK202735.1|CK202735 FGAS011260 Triticum aestivum FGAS: L... 105 4e-022
>gb|BJ266775.1|BJ266775 BJ266775 Y. Ogihara unpublished cDNA library, Wh_h Triticum
aestivum cDNA clone whh6o11 3', mRNA sequence
Length = 734
Score = 229 bits (495), Expect = 2e-059
Identities = 97/119 (81%), Positives = 104/119 (87%)
Frame = +3 / -3
Query: 3 SXXVXTXXXXDXNXXAFKEVAIISHPRVGEYAFGFITSTMVLQTDKGDEELCSVYVPTNH 182
S V T D N AFKEVAII HPRVGEYAFGFITST+VLQTDKGDEELCSVYVPTNH
Sbjct: 711 SKQVSTAISPDQNTTAFKEVAIIRHPRVGEYAFGFITSTVVLQTDKGDEELCSVYVPTNH 532
Query: 183 LYIGDIFLVNSAEIIRPNLSIREGIEIIVSGGMTMPQVIMSLEPTPRKSQNVRLDRVRT 359
LYIGDIFL+NS EIIRPNLSIREGIEIIVSGGMTMPQVI SL+P PRKSQ++RL+R+ T
Sbjct: 531 LYIGDIFLLNSEEIIRPNLSIREGIEIIVSGGMTMPQVIASLDPIPRKSQSIRLNRIMT 355
Score = 188 bits (406), Expect = 5e-047
Identities = 83/119 (69%), Positives = 97/119 (81%)
Frame = -3 / +2
Query: 358 VLTLSKRTFWLFRGVGSSDMITCGIVIPPETIISMPSRIDKLGLIISAEFTKKMSPIYK* 179
V+ L +R WLF G+GSSD ITCG+VIPPETIIS+PSR+DK GL+IS+EF++ +SPIY+*
Sbjct: 356 VIILFRRMLWLFLGMGSSDAITCGMVIPPETIISIPSRMDKFGLMISSEFSRNISPIYR* 535
Query: 178 LVGT*TLHNSSSPLSV*RTMVDVMNPNAYSPTRG*LMIATSLNAXXFXSXXXXVXTXXD 2
VGT*TLHNSSSPLSV*RT VDV+NPNAYSPTRG +IATSLNA F S V T D
Sbjct: 536 FVGT*TLHNSSSPLSV*RTTVDVINPNAYSPTRGCRIIATSLNAVVF*SGEMAVLTCFD 712
Score = 105 bits (224), Expect = 6e-022
Identities = 44/76 (57%), Positives = 55/76 (72%)
Frame = -2 / +1
Query: 260 FYAFTNRQIGPYNFGGVYQKDVTNI*MIGWHINTTQFFITFVCLKNHG*CYESKCIFTNT 81
F +F+N + + V QK +TNI*MI WHINTTQF ITFVCLK++ *CY+S+C+FTNT
Sbjct: 454 FNSFSNG*VWSDDLFRVQQKYITNI*MICWHINTTQFLITFVCLKDNS*CYKSECVFTNT 633
Query: 80 GMTNDCYFFECXXIXI 33
M N C FF+C I I
Sbjct: 634 WMPNYCNFFKCCRILI 681
>gb|CD868499.1|CD868499 AZO2.109B04F001114 AZO2 Triticum aestivum cDNA clone AZO2109B04,
mRNA sequence
Length = 570
Score = 229 bits (495), Expect = 2e-059
Identities = 97/119 (81%), Positives = 104/119 (87%)
Frame = +3 / +2
Query: 3 SXXVXTXXXXDXNXXAFKEVAIISHPRVGEYAFGFITSTMVLQTDKGDEELCSVYVPTNH 182
S V T D N AFKEVAII HPRVGEYAFGFITST+VLQTDKGDEELCSVYVPTNH
Sbjct: 101 SKQVSTAISPDQNTTAFKEVAIIRHPRVGEYAFGFITSTVVLQTDKGDEELCSVYVPTNH 280
Query: 183 LYIGDIFLVNSAEIIRPNLSIREGIEIIVSGGMTMPQVIMSLEPTPRKSQNVRLDRVRT 359
LYIGDIFL+NS EIIRPNLSIREGIEIIVSGGMTMPQVI SL+P PRKSQ++RL+R+ T
Sbjct: 281 LYIGDIFLLNSEEIIRPNLSIREGIEIIVSGGMTMPQVIASLDPIPRKSQSIRLNRIMT 457
Score = 186 bits (400), Expect = 3e-046
Identities = 82/119 (68%), Positives = 96/119 (80%)
Frame = -3 / -1
Query: 358 VLTLSKRTFWLFRGVGSSDMITCGIVIPPETIISMPSRIDKLGLIISAEFTKKMSPIYK* 179
V+ L +R WLF G+GSSD ITCG+VIPPETIIS+PSR+DK GL+IS+EF++ +SPIY+*
Sbjct: 456 VIILFRRMLWLFLGMGSSDAITCGMVIPPETIISIPSRMDKFGLMISSEFSRNISPIYR* 277
Query: 178 LVGT*TLHNSSSPLSV*RTMVDVMNPNAYSPTRG*LMIATSLNAXXFXSXXXXVXTXXD 2
VGT*TLHNSSSPLSV*RT VDV+NP AYSPTRG +IATSLNA F S V T D
Sbjct: 276 FVGT*TLHNSSSPLSV*RTTVDVINPKAYSPTRGCRIIATSLNAVVF*SGEMAVLTCFD 100
>gb|CD907174.1|CD907174 G468.106C13F010810 G468 Triticum aestivum cDNA clone G468106C13,
mRNA sequence
Length = 628
Score = 229 bits (495), Expect = 2e-059
Identities = 97/119 (81%), Positives = 104/119 (87%)
Frame = +3 / +1
Query: 3 SXXVXTXXXXDXNXXAFKEVAIISHPRVGEYAFGFITSTMVLQTDKGDEELCSVYVPTNH 182
S V T D N AFKEVAII HPRVGEYAFGFITST+VLQTDKGDEELCSVYVPTNH
Sbjct: 40 SKQVSTAISPDQNTTAFKEVAIIRHPRVGEYAFGFITSTVVLQTDKGDEELCSVYVPTNH 219
Query: 183 LYIGDIFLVNSAEIIRPNLSIREGIEIIVSGGMTMPQVIMSLEPTPRKSQNVRLDRVRT 359
LYIGDIFL+NS EIIRPNLSIREGIEIIVSGGMTMPQVI SL+P PRKSQ++RL+R+ T
Sbjct: 220 LYIGDIFLLNSEEIIRPNLSIREGIEIIVSGGMTMPQVIASLDPIPRKSQSIRLNRIMT 396
Score = 186 bits (400), Expect = 3e-046
Identities = 82/119 (68%), Positives = 96/119 (80%)
Frame = -3 / -3
Query: 358 VLTLSKRTFWLFRGVGSSDMITCGIVIPPETIISMPSRIDKLGLIISAEFTKKMSPIYK* 179
V+ L +R WLF G+GSSD ITCG+VIPPETIIS+PSR+DK GL+IS+EF++ +SPIY+*
Sbjct: 395 VIILFRRMLWLFLGMGSSDAITCGMVIPPETIISIPSRMDKFGLMISSEFSRNISPIYR* 216
Query: 178 LVGT*TLHNSSSPLSV*RTMVDVMNPNAYSPTRG*LMIATSLNAXXFXSXXXXVXTXXD 2
VGT*TLHNSSSPLSV*RT VDV+NP AYSPTRG +IATSLNA F S V T D
Sbjct: 215 FVGT*TLHNSSSPLSV*RTTVDVINPKAYSPTRGCRIIATSLNAVVF*SGEMAVLTCFD 39
>gb|CN011621.1|CN011621 WHE3886_D10_H20ZS Wheat Fusarium graminearum infected spike cDNA
library Triticum aestivum cDNA clone WHE3886_D10_H20,
mRNA sequence
Length = 632
Score = 229 bits (495), Expect = 2e-059
Identities = 97/119 (81%), Positives = 104/119 (87%)
Frame = +3 / +3
Query: 3 SXXVXTXXXXDXNXXAFKEVAIISHPRVGEYAFGFITSTMVLQTDKGDEELCSVYVPTNH 182
S V T D N AFKEVAII HPRVGEYAFGFITST+VLQTDKGDEELCSVYVPTNH
Sbjct: 186 SKQVSTAISPDQNTTAFKEVAIIRHPRVGEYAFGFITSTVVLQTDKGDEELCSVYVPTNH 365
Query: 183 LYIGDIFLVNSAEIIRPNLSIREGIEIIVSGGMTMPQVIMSLEPTPRKSQNVRLDRVRT 359
LYIGDIFL+NS EIIRPNLSIREGIEIIVSGGMTMPQVI SL+P PRKSQ++RL+R+ T
Sbjct: 366 LYIGDIFLLNSEEIIRPNLSIREGIEIIVSGGMTMPQVIASLDPIPRKSQSIRLNRIMT 542
Score = 186 bits (400), Expect = 3e-046
Identities = 82/119 (68%), Positives = 96/119 (80%)
Frame = -3 / -2
Query: 358 VLTLSKRTFWLFRGVGSSDMITCGIVIPPETIISMPSRIDKLGLIISAEFTKKMSPIYK* 179
V+ L +R WLF G+GSSD ITCG+VIPPETIIS+PSR+DK GL+IS+EF++ +SPIY+*
Sbjct: 541 VIILFRRMLWLFLGMGSSDAITCGMVIPPETIISIPSRMDKFGLMISSEFSRNISPIYR* 362
Query: 178 LVGT*TLHNSSSPLSV*RTMVDVMNPNAYSPTRG*LMIATSLNAXXFXSXXXXVXTXXD 2
VGT*TLHNSSSPLSV*RT VDV+NP AYSPTRG +IATSLNA F S V T D
Sbjct: 361 FVGT*TLHNSSSPLSV*RTTVDVINPKAYSPTRGCRIIATSLNAVVF*SGEMAVLTCFD 185
>gb|CD868500.1|CD868500 AZO2.109B04R010328 AZO2 Triticum aestivum cDNA clone AZO2109B04,
mRNA sequence
Length = 708
Score = 228 bits (493), Expect = 5e-059
Identities = 96/116 (82%), Positives = 103/116 (88%)
Frame = +3 / -2
Query: 12 VXTXXXXDXNXXAFKEVAIISHPRVGEYAFGFITSTMVLQTDKGDEELCSVYVPTNHLYI 191
V T D N AFKEVAII HPRVGEYAFGFITST+VLQTDKGDEELCSVYVPTNHLYI
Sbjct: 704 VSTAISPDQNTTAFKEVAIIRHPRVGEYAFGFITSTVVLQTDKGDEELCSVYVPTNHLYI 525
Query: 192 GDIFLVNSAEIIRPNLSIREGIEIIVSGGMTMPQVIMSLEPTPRKSQNVRLDRVRT 359
GDIFL+NS EIIRPNLSIREGIEIIVSGGMTMPQVI SL+P PRKSQ++RL+R+ T
Sbjct: 524 GDIFLLNSEEIIRPNLSIREGIEIIVSGGMTMPQVIASLDPIPRKSQSIRLNRIMT 357
Score = 184 bits (397), Expect = 8e-046
Identities = 81/116 (69%), Positives = 95/116 (81%)
Frame = -3 / +1
Query: 358 VLTLSKRTFWLFRGVGSSDMITCGIVIPPETIISMPSRIDKLGLIISAEFTKKMSPIYK* 179
V+ L +R WLF G+GSSD ITCG+VIPPETIIS+PSR+DK GL+IS+EF++ +SPIY+*
Sbjct: 358 VIILFRRMLWLFLGMGSSDAITCGMVIPPETIISIPSRMDKFGLMISSEFSRNISPIYR* 537
Query: 178 LVGT*TLHNSSSPLSV*RTMVDVMNPNAYSPTRG*LMIATSLNAXXFXSXXXXVXT 11
VGT*TLHNSSSPLSV*RT VDV+NP AYSPTRG +IATSLNA F S V T
Sbjct: 538 FVGT*TLHNSSSPLSV*RTTVDVINPKAYSPTRGCRIIATSLNAVVF*SGEMAVLT 705
>gb|CF133714.1|CF133714 WHE4362_D10_H20ZT Wheat meiotic floret cDNA library Triticum
aestivum cDNA clone WHE4362_D10_H20, mRNA sequence
Length = 761
Score = 223 bits (482), Expect = 2e-057
Identities = 96/121 (79%), Positives = 102/121 (84%)
Frame = +3 / +3
Query: 3 SXXVXTXXXXDXNXXAFKEVAIISHPRVGEYAFGFITSTMVLQTDKGDEELCSVYVPTNH 182
S V T D N AFKEVAIISHPR GEYAFGFITS+M+LQTDKGDEELCSVYVPTNH
Sbjct: 255 SKQVSTAVSPDQNTAAFKEVAIISHPRAGEYAFGFITSSMILQTDKGDEELCSVYVPTNH 434
Query: 183 LYIGDIFLVNSAEIIRPNLSIREGIEIIVSGGMTMPQVIMSLEPTPRKSQNVRLDRVRTV 362
LYIGDIFLVNSAEIIRPNLSIREGIEIIVSGGMTMPQVI +L P P K++ RL R+ TV
Sbjct: 435 LYIGDIFLVNSAEIIRPNLSIREGIEIIVSGGMTMPQVITALGPAPDKNEGTRLSRMMTV 614
Query: 363 * 365
*
Sbjct: 615 * 617
Score = 185 bits (398), Expect = 6e-046
Identities = 85/120 (70%), Positives = 96/120 (80%)
Frame = -3 / -2
Query: 361 TVLTLSKRTFWLFRGVGSSDMITCGIVIPPETIISMPSRIDKLGLIISAEFTKKMSPIYK 182
TV+ L KR G G S +ITCG+VIPPETIIS+PSR+D+LGLIISAEFTKK+SPIY+
Sbjct: 613 TVIILLKRVPSFLSGAGPSAVITCGMVIPPETIISIPSRMDRLGLIISAEFTKKISPIYR 434
Query: 181 *LVGT*TLHNSSSPLSV*RTMVDVMNPNAYSPTRG*LMIATSLNAXXFXSXXXXVXTXXD 2
*LVGT*TLH+SSSPLSV*R M+DVMNPNAYSP RG L+IATSLNA F S V T D
Sbjct: 433 *LVGT*TLHSSSSPLSV*RIMLDVMNPNAYSPARGWLIIATSLNAAVF*SGETAVLTCFD 254
Score = 154 bits (330), Expect = 1e-036
Identities = 62/96 (64%), Positives = 71/96 (73%)
Frame = -2 / -1
Query: 299 DHLRXXXXXXXNYFYAFTNRQIGPYNFGGVYQKDVTNI*MIGWHINTTQFFITFVCLKNH 120
+HLR NYFY F+N QIGPYNF V+QKD+TNI*MIGWHI+TTQFFITFV LKNH
Sbjct: 551 NHLRHGHSSRDNYFYPFSNGQIGPYNFRRVHQKDITNI*MIGWHIDTTQFFITFVSLKNH 372
Query: 119 G*CYESKCIFTNTGMTNDCYFFECXXIXIXXXXSXN 12
CYE KC+FT+TGM N C+FF+C I I S N
Sbjct: 371 ARCYEPKCVFTSTGMANYCHFFKCCCILIW*NSSTN 264
Score = 145 bits (312), Expect = 4e-034
Identities = 72/119 (60%), Positives = 79/119 (66%)
Frame = -1 / -3
Query: 357 SSLCLNGRSGSSEVLVPVT*SPAA*SFLLKQLFLCLHE*TNWAL*FRRSLPKRCHQYIND 178
SS CLNG S + V *SPAA SFL +QLFL L E T+WAL*F +S PKR HQYI+D
Sbjct: 609 SSFCLNGCPRSYQGQVLAL*SPAAWSFLQRQLFLSLLEWTDWAL*FPQSSPKRYHQYIDD 430
Query: 177 WLAHKHYTILHHLCLSEEPWLML*IQMHIHQHGDDXXXXXL*MLXXXDLXXXXXXXALM 1
WLAH+HYT+LHHLC SEE ML* QM IHQHGD L*ML DL ALM
Sbjct: 429 WLAHRHYTVLHHLCQSEESCSML*TQMRIHQHGDG*LLPLL*MLLYFDLVKQQY*LALM 253
Score = 140 bits (300), Expect = 2e-032
Identities = 75/118 (63%), Positives = 77/118 (65%)
Frame = +1 / +1
Query: 1 HQXXXXLXXXQIXXXXHSKK*QSLVIPVLVNMHLDS*HQPWFFRQTKVMKNCVVFMCQPI 180
HQ L QI H KK Q L IPVLVN HL S*H+ FFR TKVMKNCVV MCQPI
Sbjct: 253 HQSKLVLLFHQIKIQQHLKKWQ*LAIPVLVNTHLGS*HRA*FFRLTKVMKNCVVSMCQPI 432
Query: 181 IYILVTSFW*TPPKL*GPICLFVKA*K*LFQEE*LCRR*SCHWNQHLGRARTSV*TE* 354
IYILV SFW*T KL*GPIC F K *K*L EE* CRR* + L R R V* E*
Sbjct: 433 IYILVISFW*TLRKL*GPICPFEKG*K*LSLEE*PCRR*LQR*DLPLIRTRAPV*AE* 606
Score = 108 bits (230), Expect = 9e-023
Identities = 50/80 (62%), Positives = 59/80 (73%)
Frame = +2 / +2
Query: 125 SSDRQR**RIV*CLCANQSFIYW*HLFGKLRRNYKAQFVYS*RHRNNCFRRNDYAAGDHV 304
SSD QR**R V*CLCANQS IYW*+LFG+L NYKAQ V+S R RNNC RND+AAGD+
Sbjct: 377 SSD*QR**RTV*CLCANQSSIYW*YLFGELCGNYKAQSVHSRRDRNNCLWRNDHAAGDYS 556
Query: 305 TGTNTSEEPERPFRQSEDSM 364
T E PF+Q++D +
Sbjct: 557 ARTCP**ERGHPFKQNDDCL 616
>gb|BJ307537.1|BJ307537 BJ307537 Y. Ogihara unpublished cDNA library, Wh_yd Triticum
aestivum cDNA clone whyd11n24 3', mRNA sequence
Length = 708
Score = 194 bits (418), Expect = 1e-048
Identities = 80/92 (86%), Positives = 88/92 (95%)
Frame = +3 / -3
Query: 84 VGEYAFGFITSTMVLQTDKGDEELCSVYVPTNHLYIGDIFLVNSAEIIRPNLSIREGIEI 263
+GEYAFGFITST+VLQTDKGDEELCSVYVPTNHLYIGDIFL+NS EIIRPNLSIREGIEI
Sbjct: 694 LGEYAFGFITSTVVLQTDKGDEELCSVYVPTNHLYIGDIFLLNSEEIIRPNLSIREGIEI 515
Query: 264 IVSGGMTMPQVIMSLEPTPRKSQNVRLDRVRT 359
IVSGGMTMPQVI SL+P PRKSQ++RL+R+ T
Sbjct: 514 IVSGGMTMPQVIASLDPIPRKSQSIRLNRIMT 419
Score = 164 bits (352), Expect = 1e-039
Identities = 68/91 (74%), Positives = 81/91 (89%)
Frame = -3 / +3
Query: 358 VLTLSKRTFWLFRGVGSSDMITCGIVIPPETIISMPSRIDKLGLIISAEFTKKMSPIYK* 179
V+ L +R WLF G+GSSD ITCG+VIPPETIIS+PSR+DK GL+IS+EF++ +SPIY+*
Sbjct: 420 VIILFRRMLWLFLGMGSSDAITCGMVIPPETIISIPSRMDKFGLMISSEFSRNISPIYR* 599
Query: 178 LVGT*TLHNSSSPLSV*RTMVDVMNPNAYSP 86
VGT*TLHNSSSPLSV*RT VDV+NPNAYSP
Sbjct: 600 FVGT*TLHNSSSPLSV*RTTVDVINPNAYSP 692
>gb|BJ214052.1|BJ214052 BJ214052 Y. Ogihara unpublished cDNA library, Wh Triticum aestivum
cDNA clone wh25j18 5', mRNA sequence
Length = 693
Score = 170 bits (365), Expect = 2e-041
Identities = 68/106 (64%), Positives = 83/106 (78%)
Frame = +3 / +1
Query: 3 SXXVXTXXXXDXNXXAFKEVAIISHPRVGEYAFGFITSTMVLQTDKGDEELCSVYVPTNH 182
S + D N AFKE II HPR+GEYAFGFITS++ LQ+ G E+L VYVPTNH
Sbjct: 274 SKQISAAISPDQNKQAFKEAVIIRHPRIGEYAFGFITSSVSLQSYSGQEDLYCVYVPTNH 453
Query: 183 LYIGDIFLVNSAEIIRPNLSIREGIEIIVSGGMTMPQVIMSLEPTP 320
LYIGDIF+VNS ++IRPNLS+REGIEI+VSGGM+MPQV+ +L+P P
Sbjct: 454 LYIGDIFMVNSKDVIRPNLSVREGIEIVVSGGMSMPQVLSTLDPHP 591
>gb|BJ221532.1|BJ221532 BJ221532 Y. Ogihara unpublished cDNA library, Wh Triticum aestivum
cDNA clone wh25j18 3', mRNA sequence
Length = 603
Score = 170 bits (365), Expect = 2e-041
Identities = 68/106 (64%), Positives = 83/106 (78%)
Frame = +3 / -2
Query: 3 SXXVXTXXXXDXNXXAFKEVAIISHPRVGEYAFGFITSTMVLQTDKGDEELCSVYVPTNH 182
S + D N AFKE II HPR+GEYAFGFITS++ LQ+ G E+L VYVPTNH
Sbjct: 554 SKQISAAISPDQNKQAFKEAVIIRHPRIGEYAFGFITSSVSLQSYSGQEDLYCVYVPTNH 375
Query: 183 LYIGDIFLVNSAEIIRPNLSIREGIEIIVSGGMTMPQVIMSLEPTP 320
LYIGDIF+VNS ++IRPNLS+REGIEI+VSGGM+MPQV+ +L+P P
Sbjct: 374 LYIGDIFMVNSKDVIRPNLSVREGIEIVVSGGMSMPQVLSTLDPHP 237
>gb|CA743035.1|CA743035 wri1s.pk002.e9 wri1s Triticum aestivum cDNA clone wri1s.pk002.e9 5'
end, mRNA sequence
Length = 631
Score = 169 bits (364), Expect = 3e-041
Identities = 67/106 (63%), Positives = 83/106 (78%)
Frame = +3 / +3
Query: 3 SXXVXTXXXXDXNXXAFKEVAIISHPRVGEYAFGFITSTMVLQTDKGDEELCSVYVPTNH 182
S + D N AFKE II HPR+GEYAFGFITS++ LQ+ G E+L VYVPTNH
Sbjct: 87 SKQISAAISPDQNKQAFKEAVIIRHPRIGEYAFGFITSSVSLQSYSGQEDLYCVYVPTNH 266
Query: 183 LYIGDIFLVNSAEIIRPNLSIREGIEIIVSGGMTMPQVIMSLEPTP 320
LYIGDIF+VNS ++IRPNLS+REGIEI+VSGGM+MPQ++ +L+P P
Sbjct: 267 LYIGDIFMVNSKDVIRPNLSVREGIEIVVSGGMSMPQILSTLDPHP 404
>gb|CD900181.1|CD900181 G174.114L13F010824 G174 Triticum aestivum cDNA clone G174114L13,
mRNA sequence
Length = 703
Score = 169 bits (364), Expect = 3e-041
Identities = 67/106 (63%), Positives = 83/106 (78%)
Frame = +3 / +3
Query: 3 SXXVXTXXXXDXNXXAFKEVAIISHPRVGEYAFGFITSTMVLQTDKGDEELCSVYVPTNH 182
S + D N AFKE II HPR+GEYAFGFITS++ LQ+ G E+L VYVPTNH
Sbjct: 81 SKQISAAISPDQNKQAFKEAVIIRHPRIGEYAFGFITSSVSLQSYSGQEDLYCVYVPTNH 260
Query: 183 LYIGDIFLVNSAEIIRPNLSIREGIEIIVSGGMTMPQVIMSLEPTP 320
LYIGDIF+VNS ++IRPNLS+REGIEI+VSGGM+MPQ++ +L+P P
Sbjct: 261 LYIGDIFMVNSKDVIRPNLSVREGIEIVVSGGMSMPQILSTLDPHP 398
>gb|CA719172.1|CA719172 wkm2n.pk003.b11 wkm2n Triticum aestivum cDNA clone wkm2n.pk003.b11
5' end, mRNA sequence
Length = 593
Score = 168 bits (361), Expect = 8e-041
Identities = 67/106 (63%), Positives = 83/106 (78%)
Frame = +3 / +1
Query: 3 SXXVXTXXXXDXNXXAFKEVAIISHPRVGEYAFGFITSTMVLQTDKGDEELCSVYVPTNH 182
S + D N AFKE II HPR+GEYAFGFITS++ LQ+ G E+L VYVPTNH
Sbjct: 52 SKQISAAISPDQNKQAFKEGVIIRHPRIGEYAFGFITSSVSLQSYSGQEDLYCVYVPTNH 231
Query: 183 LYIGDIFLVNSAEIIRPNLSIREGIEIIVSGGMTMPQVIMSLEPTP 320
LYIGDIF+VNS ++IRPNLS+REGIEI+VSGGM+MPQ++ +L+P P
Sbjct: 232 LYIGDIFMVNSKDVIRPNLSVREGIEIVVSGGMSMPQILSTLDPHP 369
>gb|BQ294965.1|BQ294965 WHE2856_F10_K20ZS Wheat unstressed root tip cDNA library Triticum
aestivum cDNA clone WHE2856_F10_K20, mRNA sequence
Length = 691
Score = 156 bits (336), Expect = 2e-037
Identities = 66/80 (82%), Positives = 68/80 (85%)
Frame = +3 / +1
Query: 3 SXXVXTXXXXDXNXXAFKEVAIISHPRVGEYAFGFITSTMVLQTDKGDEELCSVYVPTNH 182
S V T D N AFKEVAII HPRVGEYAFGFITST+VLQTDKGDEELCSVYVPTNH
Sbjct: 451 SKQVSTAISPDQNTTAFKEVAIIRHPRVGEYAFGFITSTVVLQTDKGDEELCSVYVPTNH 630
Query: 183 LYIGDIFLVNSAEIIRPNLS 242
LYIGDIFL+NS EIIRPNLS
Sbjct: 631 LYIGDIFLLNSEEIIRPNLS 690
Score = 119 bits (255), Expect = 3e-026
Identities = 55/80 (68%), Positives = 63/80 (78%)
Frame = -3 / -3
Query: 241 DKLGLIISAEFTKKMSPIYK*LVGT*TLHNSSSPLSV*RTMVDVMNPNAYSPTRG*LMIA 62
DK GL+IS+EF++ +SPIY+* VGT*TLHNSSSPLSV*RT VDV+NP AYSPTRG +IA
Sbjct: 689 DKFGLMISSEFSRNISPIYR*FVGT*TLHNSSSPLSV*RTTVDVINPKAYSPTRGCRIIA 510
Query: 61 TSLNAXXFXSXXXXVXTXXD 2
TSLNA F S V T D
Sbjct: 509 TSLNAVVF*SGEMAVLTCFD 450
>gb|BJ258298.1|BJ258298 BJ258298 Y. Ogihara unpublished cDNA library, Wh_h Triticum
aestivum cDNA clone whh6o11 5', mRNA sequence
Length = 648
Score = 150 bits (322), Expect = 2e-035
Identities = 63/77 (81%), Positives = 65/77 (84%)
Frame = +3 / +1
Query: 3 SXXVXTXXXXDXNXXAFKEVAIISHPRVGEYAFGFITSTMVLQTDKGDEELCSVYVPTNH 182
S V T D N AFKEVAII HPRVGEYAFGFITST+VLQTDKGDEELCSVYVPTNH
Sbjct: 418 SKQVSTAISPDQNTTAFKEVAIIRHPRVGEYAFGFITSTVVLQTDKGDEELCSVYVPTNH 597
Query: 183 LYIGDIFLVNSAEIIRP 233
LYIGDIFL+NS EIIRP
Sbjct: 598 LYIGDIFLLNSEEIIRP 648
Score = 117 bits (250), Expect = 2e-025
Identities = 54/77 (70%), Positives = 62/77 (80%)
Frame = -3 / -2
Query: 232 GLIISAEFTKKMSPIYK*LVGT*TLHNSSSPLSV*RTMVDVMNPNAYSPTRG*LMIATSL 53
GL+IS+EF++ +SPIY+* VGT*TLHNSSSPLSV*RT VDV+NPNAYSPTRG +IATSL
Sbjct: 647 GLMISSEFSRNISPIYR*FVGT*TLHNSSSPLSV*RTTVDVINPNAYSPTRGCRIIATSL 468
Query: 52 NAXXFXSXXXXVXTXXD 2
NA F S V T D
Sbjct: 467 NAVVF*SGEMAVLTCFD 417
Score = 103 bits (219), Expect = 3e-021
Identities = 41/60 (68%), Positives = 48/60 (80%)
Frame = -2 / -1
Query: 212 VYQKDVTNI*MIGWHINTTQFFITFVCLKNHG*CYESKCIFTNTGMTNDCYFFECXXIXI 33
V QK +TNI*MI WHINTTQF ITFVCLK++ *CY+S+C+FTNT M N C FF+C I I
Sbjct: 627 VQQKYITNI*MICWHINTTQFLITFVCLKDNS*CYKSECVFTNTWMPNYCNFFKCCRILI 448
>gb|CV759008.1|CV759008 FGAS053390 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 855
Score = 145 bits (312), Expect = 4e-034
Identities = 61/79 (77%), Positives = 64/79 (81%)
Frame = +3 / +1
Query: 3 SXXVXTXXXXDXNXXAFKEVAIISHPRVGEYAFGFITSTMVLQTDKGDEELCSVYVPTNH 182
S V T D N AFKEVAII HPRVGEYAFGFITST+VL T+KGDEELCSVYVPTNH
Sbjct: 583 SKQVSTAISPDQNTTAFKEVAIIRHPRVGEYAFGFITSTVVLPTEKGDEELCSVYVPTNH 762
Query: 183 LYIGDIFLVNSAEIIRPNL 239
LYIGDIFL+NS EI RP L
Sbjct: 763 LYIGDIFLLNSEEIFRPKL 819
Score = 113 bits (241), Expect = 3e-024
Identities = 53/78 (67%), Positives = 60/78 (76%)
Frame = -3 / -2
Query: 235 LGLIISAEFTKKMSPIYK*LVGT*TLHNSSSPLSV*RTMVDVMNPNAYSPTRG*LMIATS 56
LGL IS+EF++ +SPIY+* VGT*TLHNSSSP SV RT VDV+NPNAYSPTRG +IATS
Sbjct: 815 LGLKISSEFSRNISPIYR*FVGT*TLHNSSSPFSVGRTTVDVINPNAYSPTRGCRIIATS 636
Query: 55 LNAXXFXSXXXXVXTXXD 2
LNA F S V T D
Sbjct: 635 LNAVVF*SGEMAVLTCFD 582
>gb|CV764611.1|CV764611 FGAS058996 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 822
Score = 141 bits (303), Expect = 8e-033
Identities = 60/75 (80%), Positives = 62/75 (82%)
Frame = +3 / +1
Query: 3 SXXVXTXXXXDXNXXAFKEVAIISHPRVGEYAFGFITSTMVLQTDKGDEELCSVYVPTNH 182
S V T D N AFKEVAII HPRVGEYAFGFITST+VLQTDKGDEELCSVYVPTNH
Sbjct: 595 SKQVSTAVSPDQNTTAFKEVAIIRHPRVGEYAFGFITSTVVLQTDKGDEELCSVYVPTNH 774
Query: 183 LYIGDIFLVNSAEII 227
LYIGDIFL +S EII
Sbjct: 775 LYIGDIFLPDSXEII 819
Score = 111 bits (237), Expect = 1e-023
Identities = 53/76 (69%), Positives = 59/76 (77%)
Frame = -3 / -2
Query: 229 LIISAEFTKKMSPIYK*LVGT*TLHNSSSPLSV*RTMVDVMNPNAYSPTRG*LMIATSLN 50
L+IS E +KMSPIY+* VGT*TLH+SSSPLSV*RT VDV+NPNAYSPTRG +IATSLN
Sbjct: 821 LMISXESGRKMSPIYR*FVGT*TLHSSSSPLSV*RTTVDVINPNAYSPTRGCRIIATSLN 642
Query: 49 AXXFXSXXXXVXTXXD 2
A F S V T D
Sbjct: 641 AVVF*SGETAVLTCFD 594
>gb|BJ276695.1|BJ276695 BJ276695 Y. Ogihara unpublished cDNA library, Wh_oh Triticum
aestivum cDNA clone whoh1p20 3', mRNA sequence
Length = 586
Score = 87.7 bits (185), Expect(2) = 3e-030
Identities = 39/51 (76%), Positives = 43/51 (84%)
Frame = +3 / -3
Query: 213 SAEIIRPNLSIREGIEIIVSGGMTMPQVIMSLEPTPRKSQNVRLDRVRTV* 365
SAEIIRPNLSIREGIEIIVSGGMTMPQVI +L P P K++ RL R+ TV*
Sbjct: 467 SAEIIRPNLSIREGIEIIVSGGMTMPQVITALGPAPDKNEGTRLSRMMTV* 315
Score = 76.7 bits (161), Expect(2) = 5e-027
Identities = 34/54 (62%), Positives = 41/54 (75%)
Frame = -3 / +1
Query: 361 TVLTLSKRTFWLFRGVGSSDMITCGIVIPPETIISMPSRIDKLGLIISAEFTKK 200
TV+ L KR G G S +ITCG+VIPPETIIS+PSR+D+LGLIISAE +K
Sbjct: 319 TVIILLKRVPSFLSGAGPSAVITCGMVIPPETIISIPSRMDRLGLIISAEVHQK 480
Score = 65.2 bits (136), Expect(2) = 5e-027
Identities = 22/28 (78%), Positives = 25/28 (89%)
Frame = -1 / +3
Query: 222 FRRSLPKRCHQYINDWLAHKHYTILHHL 139
FRR PKR HQYI+DWLAH+HYT+LHHL
Sbjct: 459 FRRGSPKRYHQYIDDWLAHRHYTVLHHL 542
Score = 65.2 bits (136), Expect(2) = 3e-030
Identities = 25/25 (100%), Positives = 25/25 (100%)
Frame = +3 / -2
Query: 138 KGDEELCSVYVPTNHLYIGDIFLVN 212
KGDEELCSVYVPTNHLYIGDIFLVN
Sbjct: 543 KGDEELCSVYVPTNHLYIGDIFLVN 469
>gb|CV779982.1|CV779982 FGAS074391 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 841
Score = 127 bits (271), Expect = 2e-028
Identities = 52/67 (77%), Positives = 55/67 (82%)
Frame = +3 / +1
Query: 3 SXXVXTXXXXDXNXXAFKEVAIISHPRVGEYAFGFITSTMVLQTDKGDEELCSVYVPTNH 182
S V T D N AFKEVAIISHPR GEYAFGFITS+M+LQTDKGDEELCSVYV TNH
Sbjct: 598 SKQVSTAVSPDQNTAAFKEVAIISHPRAGEYAFGFITSSMILQTDKGDEELCSVYVATNH 777
Query: 183 LYIGDIF 203
LYIG+IF
Sbjct: 778 LYIGEIF 798
Score = 107 bits (229), Expect = 1e-022
Identities = 44/65 (67%), Positives = 50/65 (76%)
Frame = -2 / -2
Query: 206 QKDVTNI*MIGWHINTTQFFITFVCLKNHG*CYESKCIFTNTGMTNDCYFFECXXIXIXX 27
+KD TNI*MIG HI+TTQFFITFV LKNH CYESKC+FT+TGM N C+FF+C I I
Sbjct: 801 KKDFTNI*MIGCHIDTTQFFITFVSLKNHARCYESKCVFTSTGMANYCHFFKCCCILIW* 622
Query: 26 XXSXN 12
S N
Sbjct: 621 NSSTN 607
Score = 105 bits (223), Expect = 8e-022
Identities = 49/68 (72%), Positives = 54/68 (79%)
Frame = -3 / -3
Query: 205 KKMSPIYK*LVGT*TLHNSSSPLSV*RTMVDVMNPNAYSPTRG*LMIATSLNAXXFXSXX 26
KK+SPIY+*LV T*TLH+SSSPLSV*R M+DVMNPNAYSP RG L+IATSLNA F S
Sbjct: 800 KKISPIYR*LVAT*TLHSSSSPLSV*RIMLDVMNPNAYSPARGWLIIATSLNAAVF*SGE 621
Query: 25 XXVXTXXD 2
V T D
Sbjct: 620 TAVLTCFD 597
>gb|CA610303.1|CA610303 wr1.pk0117.g11 wr1 Triticum aestivum cDNA clone wr1.pk0117.g11 5'
end, mRNA sequence
Length = 662
Score = 121 bits (259), Expect(2) = 4e-028
Identities = 54/79 (68%), Positives = 57/79 (72%)
Frame = +3 / +2
Query: 3 SXXVXTXXXXDXNXXAFKEVAIISHPRVGEYAFGFITSTMVLQTDKGDEELCSVYVPTNH 182
S V T D N AFKEVAII HPRVGEYAFGFITST+VLQTDKGDEELCSVYVPT
Sbjct: 35 SKQVSTAVSPDQNTTAFKEVAIIRHPRVGEYAFGFITSTVVLQTDKGDEELCSVYVPTII 214
Query: 183 LYIGDIFLVNSAEIIRPNL 239
+GD F N EII+ L
Sbjct: 215 YILGDTFSWNLEEIIKTKL 271
Score = 24.0 bits (46), Expect(2) = 4e-028
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = +3 / +2
Query: 273 GGMTMPQVIMSLEPTPR 323
G MTMP VI SL P+
Sbjct: 311 GXMTMPXVIASLVSXPQ 361
>gb|CD905162.1|CD905162 G468.100L17F010614 G468 Triticum aestivum cDNA clone G468100L17,
mRNA sequence
Length = 517
Score = 110 bits (234), Expect = 3e-023
Identities = 46/56 (82%), Positives = 52/56 (92%)
Frame = +3 / +3
Query: 192 GDIFLVNSAEIIRPNLSIREGIEIIVSGGMTMPQVIMSLEPTPRKSQNVRLDRVRT 359
GDIFL+NS EIIRPNLSIREGIEIIVSGGMTMPQVI SL+P PRKSQ++RL+R+ T
Sbjct: 15 GDIFLLNSEEIIRPNLSIREGIEIIVSGGMTMPQVIASLDPIPRKSQSIRLNRIMT 182
>gb|CK202735.1|CK202735 FGAS011260 Triticum aestivum FGAS: Library 3 Gate 6 Triticum
aestivum cDNA, mRNA sequence
Length = 849
Score = 105 bits (225), Expect = 4e-022
Identities = 47/59 (79%), Positives = 51/59 (86%)
Frame = +3 / +3
Query: 189 IGDIFLVNSAEIIRPNLSIREGIEIIVSGGMTMPQVIMSLEPTPRKSQNVRLDRVRTV* 365
IGDIFLVNSAEIIRPNLSIREGIEIIVSGGMTMPQVI +L P P K++ RL R+ TV*
Sbjct: 114 IGDIFLVNSAEIIRPNLSIREGIEIIVSGGMTMPQVITALGPAPDKNEGTRLSRMMTV* 290
Database: Triticum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 3:01 PM
Number of letters in database: 367,240,239
Number of sequences in database: 636,343
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 674,394,788
Number of Sequences: 636343
Number of extensions: 9885977
Number of successful extensions: 67536
Number of sequences better than 1.0e-020: 32
length of database: 122,413,413
effective HSP length: 53
effective length of database: 88,687,234
effective search space used: 17648759566
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)