TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3230315.2.1
(457 letters)
Database: Triticum_nucl_with_EST.fasta
636,343 sequences; 367,240,239 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CV777756.1|CV777756 FGAS072163 Triticum aestivum FGAS: L... 213 8e-055
gb|CK211986.1|CK211986 FGAS023849 Triticum aestivum FGAS: L... 213 1e-054
gb|CA721383.1|CA721383 wdk9n.pk001.p9 wdk9n Triticum aestiv... 211 3e-054
gb|CA717792.1|CA717792 wdk4c.pk006.h3 wdk4c Triticum aestiv... 165 4e-040
gb|CD878081.1|CD878081 AZO4.101N22R011122 AZO4 Triticum aes... 152 2e-036
gb|BJ250042.1|BJ250042 BJ250042 Y. Ogihara unpublished cDNA... 144 4e-034
gb|BJ252439.1|BJ252439 BJ252439 Y. Ogihara unpublished cDNA... 144 4e-034
gb|BQ806129.1|BQ806129 WHE3575_B07_C13ZS Wheat developing g... 119 8e-034
gb|BJ249481.1|BJ249481 BJ249481 Y. Ogihara unpublished cDNA... 105 8e-034
gb|BJ249964.1|BJ249964 BJ249964 Y. Ogihara unpublished cDNA... 141 4e-033
gb|BJ250058.1|BJ250058 BJ250058 Y. Ogihara unpublished cDNA... 141 4e-033
emb|AX660696.1| Sequence 1053 from Patent WO03000906 87 9e-032
emb|AX660733.1| Sequence 1090 from Patent WO03000906 120 1e-031
gb|BE425995.1|BE425995 WHE0326_A09_A18ZS Wheat unstressed s... 136 1e-031
gb|CA604573.1|CA604573 wr1.pk0041.c12 wr1 Triticum aestivum... 135 3e-031
gb|BJ254306.1|BJ254306 BJ254306 Y. Ogihara unpublished cDNA... 116 1e-030
gb|BJ254574.1|BJ254574 BJ254574 Y. Ogihara unpublished cDNA... 116 1e-030
gb|BJ285920.1|BJ285920 BJ285920 Y. Ogihara unpublished cDNA... 108 4e-027
gb|BJ251714.1|BJ251714 BJ251714 Y. Ogihara unpublished cDNA... 108 4e-027
gb|BJ251252.1|BJ251252 BJ251252 Y. Ogihara unpublished cDNA... 108 4e-027
gb|BJ249930.1|BJ249930 BJ249930 Y. Ogihara unpublished cDNA... 106 1e-026
gb|BJ250225.1|BJ250225 BJ250225 Y. Ogihara unpublished cDNA... 104 5e-026
gb|BJ251281.1|BJ251281 BJ251281 Y. Ogihara unpublished cDNA... 104 6e-026
gb|BJ249108.1|BJ249108 BJ249108 Y. Ogihara unpublished cDNA... 76 9e-025
gb|AL822121.1|AL822121 AL822121 p:234 Triticum aestivum cDN... 111 5e-024
gb|CD452428.1|CD452428 WHE1103_D06_H11ZT CS wheat etiolated... 110 9e-024
gb|CK210460.1|CK210460 FGAS022276 Triticum aestivum FGAS: L... 110 1e-023
gb|BE606718.1|BE606718 WHE0907_G06_N11ZS Wheat 5-15 DAP spi... 106 1e-022
gb|BJ244140.1|BJ244140 BJ244140 Y. Ogihara unpublished cDNA... 106 2e-022
gb|CA619106.1|CA619106 wl1n.pk0040.d6 wl1n Triticum aestivu... 106 2e-022
gb|BE442559.1|BE442559 WHE1103_D06_H11ZS Wheat etiolated se... 102 3e-021
>gb|CV777756.1|CV777756 FGAS072163 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 819
Score = 213 bits (460), Expect = 8e-055
Identities = 83/101 (82%), Positives = 92/101 (91%)
Frame = -1 / -3
Query: 448 KTYLGRPWKQYSRTVYLQSELDSLVDPAGWLEWNGSFALDTLYYGEYMNTGPGAGTSGRV 269
KTYLGRPWKQYSRTV++QSELDS+VDPAGWL W+G+FALDTLYY EY NTGPGAGTSGRV
Sbjct: 694 KTYLGRPWKQYSRTVFIQSELDSVVDPAGWLAWDGTFALDTLYYAEYQNTGPGAGTSGRV 515
Query: 268 KWKGYRVITSAAEASAFTVGNFIDGDLWLAGTSIPFTTGL* 146
W GYR I SA+EAS FTVG+FIDGD+WLAGTSIPF+ GL*
Sbjct: 514 SWMGYRGIISASEASTFTVGSFIDGDVWLAGTSIPFSGGL* 392
Score = 177 bits (380), Expect = 9e-044
Identities = 78/101 (77%), Positives = 82/101 (81%)
Frame = +3 / +3
Query: 147 HKPVVKGMDVPASQRSPSMKLPTVKALASAALVMTRYPFHLTRPDVPAPGPVFMYSP**S 326
H P GMDVPASQ SPSMK PTVK LAS AL+M RYP H TRPDVPAPGPVF YS * S
Sbjct: 393 HNPPENGMDVPASQTSPSMKDPTVKVLASDALMMPRYPIHDTRPDVPAPGPVFWYSA*YS 572
Query: 327 VSSAKLPFHSSQPAGSTSESSSDCRYTVREYCFHGRPR*VL 449
VSSAK+P H+SQPAGST+ SSSD TVREYCFHGRPR*VL
Sbjct: 573 VSSAKVPSHASQPAGSTTLSSSDWMKTVREYCFHGRPR*VL 695
>gb|CK211986.1|CK211986 FGAS023849 Triticum aestivum FGAS: Library 6 CAP GATE 1 Triticum
aestivum cDNA, mRNA sequence
Length = 1075
Score = 213 bits (459), Expect = 1e-054
Identities = 83/101 (82%), Positives = 92/101 (91%)
Frame = -1 / -2
Query: 448 KTYLGRPWKQYSRTVYLQSELDSLVDPAGWLEWNGSFALDTLYYGEYMNTGPGAGTSGRV 269
KTYLGRPWKQYSRTV++QSELDS+VDPAGWL W+G+FALDTLYY EY NTGPGAGTS RV
Sbjct: 561 KTYLGRPWKQYSRTVFMQSELDSVVDPAGWLAWDGTFALDTLYYAEYQNTGPGAGTSARV 382
Query: 268 KWKGYRVITSAAEASAFTVGNFIDGDLWLAGTSIPFTTGL* 146
WKGYR I SA+EAS FTVG+FIDGD+WLAGTSIPF+ GL*
Sbjct: 381 AWKGYRGIISASEASTFTVGSFIDGDVWLAGTSIPFSGGL* 259
Score = 182 bits (392), Expect = 2e-045
Identities = 79/101 (78%), Positives = 83/101 (82%)
Frame = +3 / +2
Query: 147 HKPVVKGMDVPASQRSPSMKLPTVKALASAALVMTRYPFHLTRPDVPAPGPVFMYSP**S 326
H P GMDVPASQ SPSMK PTVK LAS AL+M RYPFH TR DVPAPGPVF YS **S
Sbjct: 260 HNPPENGMDVPASQTSPSMKDPTVKVLASDALMMPRYPFHATRADVPAPGPVFWYSA**S 439
Query: 327 VSSAKLPFHSSQPAGSTSESSSDCRYTVREYCFHGRPR*VL 449
VSSAK+P H+S PAGST+ SSSDC TVREYCFHGRPR*VL
Sbjct: 440 VSSAKVPSHASHPAGSTTLSSSDCMKTVREYCFHGRPR*VL 562
>gb|CA721383.1|CA721383 wdk9n.pk001.p9 wdk9n Triticum aestivum cDNA clone wdk9n.pk001.p9 5'
end, mRNA sequence
Length = 482
Score = 211 bits (456), Expect = 3e-054
Identities = 81/101 (80%), Positives = 92/101 (91%)
Frame = -1 / +1
Query: 448 KTYLGRPWKQYSRTVYLQSELDSLVDPAGWLEWNGSFALDTLYYGEYMNTGPGAGTSGRV 269
+TYLGRPWKQYSRTV++QSELDS+VDPAGWL W+G+FALDTLYY EY NTGPGAGTSGRV
Sbjct: 70 RTYLGRPWKQYSRTVFIQSELDSVVDPAGWLAWDGTFALDTLYYAEYQNTGPGAGTSGRV 249
Query: 268 KWKGYRVITSAAEASAFTVGNFIDGDLWLAGTSIPFTTGL* 146
W GYR + SA+EAS FTVG+FIDGD+WLAGTSIPF+ GL*
Sbjct: 250 SWMGYRGVISASEASTFTVGSFIDGDVWLAGTSIPFSGGL* 372
Score = 175 bits (377), Expect = 2e-043
Identities = 78/101 (77%), Positives = 82/101 (81%)
Frame = +3 / -1
Query: 147 HKPVVKGMDVPASQRSPSMKLPTVKALASAALVMTRYPFHLTRPDVPAPGPVFMYSP**S 326
H P GMDVPASQ SPSMK PTVK LAS AL+ RYP H TRPDVPAPGPVF YS **S
Sbjct: 371 HNPPENGMDVPASQTSPSMKDPTVKVLASDALMTPRYPIHDTRPDVPAPGPVFWYSA**S 192
Query: 327 VSSAKLPFHSSQPAGSTSESSSDCRYTVREYCFHGRPR*VL 449
VSSAK+P H+SQPAGST+ SSSD TVREYCFHGRPR*VL
Sbjct: 191 VSSAKVPSHASQPAGSTTLSSSD*MNTVREYCFHGRPR*VL 69
>gb|CA717792.1|CA717792 wdk4c.pk006.h3 wdk4c Triticum aestivum cDNA clone wdk4c.pk006.h3 5'
end, mRNA sequence
Length = 589
Score = 165 bits (354), Expect = 4e-040
Identities = 65/103 (63%), Positives = 75/103 (72%)
Frame = -1 / -1
Query: 448 KTYLGRPWKQYSRTVYLQSELDSLVDPAGWLEWNGSFALDTLYYGEYMNTGPGAGTSGRV 269
K YLGRPWK YSRTV ++S LD + PAGWLEW+G FAL TLYYGEY NTG GAGTSGRV
Sbjct: 433 KVYLGRPWKAYSRTVVMESSLDRSITPAGWLEWSGQFALSTLYYGEYGNTGAGAGTSGRV 254
Query: 268 KWKGYRVITSAAEASAFTVGNFIDGDLWLAGTSIPFTTGL*AR 140
+W G S EA+ FTV +FI GD WL T + +T+GL* R
Sbjct: 253 EWGGVHTSLSTVEATRFTVRDFILGDSWLGDTGVSYTSGL*VR 125
>gb|CD878081.1|CD878081 AZO4.101N22R011122 AZO4 Triticum aestivum cDNA clone AZO4101N22,
mRNA sequence
Length = 621
Score = 152 bits (327), Expect = 2e-036
Identities = 57/100 (57%), Positives = 70/100 (70%)
Frame = -1 / -1
Query: 448 KTYLGRPWKQYSRTVYLQSELDSLVDPAGWLEWNGSFALDTLYYGEYMNTGPGAGTSGRV 269
+T+LGRPWK YSRTV ++S + LVD GW+ W+G FALDTLYY EY N+GPGA T RV
Sbjct: 582 RTFLGRPWKNYSRTVVMESYIGGLVDATGWMPWSGDFALDTLYYAEYNNSGPGADTGRRV 403
Query: 268 KWKGYRVITSAAEASAFTVGNFIDGDLWLAGTSIPFTTGL 149
W GY V+ A+A FTV N + G WL T +PFT+GL
Sbjct: 402 SWPGYHVLGDGADAGNFTVDNMVLGGNWLPQTGVPFTSGL 283
>gb|BJ250042.1|BJ250042 BJ250042 Y. Ogihara unpublished cDNA library, Wh_f Triticum
aestivum cDNA clone whf14o03 3', mRNA sequence
Length = 706
Score = 144 bits (310), Expect = 4e-034
Identities = 53/102 (51%), Positives = 70/102 (68%)
Frame = -1 / -1
Query: 454 RAKTYLGRPWKQYSRTVYLQSELDSLVDPAGWLEWNGSFALDTLYYGEYMNTGPGAGTSG 275
+ KTYL RPWK+YSRT+Y+Q+E+ + +DP GWLEWNG FAL+TL+Y E NTGPGA S
Sbjct: 490 KIKTYLARPWKEYSRTIYIQNEIGAFIDPKGWLEWNGDFALETLFYAEVENTGPGADMSQ 311
Query: 274 RVKWKGYRVITSAAEASAFTVGNFIDGDLWLAGTSIPFTTGL 149
R KW G + +T A +TV FI G+ ++ +PF GL
Sbjct: 310 RAKWGGIKTVTYADAQKEYTVEAFIQGEQFIPKYGVPFIPGL 185
>gb|BJ252439.1|BJ252439 BJ252439 Y. Ogihara unpublished cDNA library, Wh_f Triticum
aestivum cDNA clone whf24f19 3', mRNA sequence
Length = 668
Score = 144 bits (310), Expect = 4e-034
Identities = 53/102 (51%), Positives = 70/102 (68%)
Frame = -1 / -3
Query: 454 RAKTYLGRPWKQYSRTVYLQSELDSLVDPAGWLEWNGSFALDTLYYGEYMNTGPGAGTSG 275
+ KTYL RPWK+YSRT+Y+Q+E+ + +DP GWLEWNG FAL+TL+Y E NTGPGA S
Sbjct: 450 KIKTYLARPWKEYSRTIYIQNEIGAFIDPKGWLEWNGDFALETLFYAEVENTGPGADMSQ 271
Query: 274 RVKWKGYRVITSAAEASAFTVGNFIDGDLWLAGTSIPFTTGL 149
R KW G + +T A +TV FI G+ ++ +PF GL
Sbjct: 270 RAKWGGIKTVTYADAQKEYTVEAFIQGEQFIPKYGVPFIPGL 145
>gb|BQ806129.1|BQ806129 WHE3575_B07_C13ZS Wheat developing grains cDNA library Triticum
aestivum cDNA clone WHE3575_B07_C13, mRNA sequence
Length = 707
Score = 119 bits (254), Expect(2) = 8e-034
Identities = 45/61 (73%), Positives = 50/61 (81%)
Frame = -1 / +1
Query: 448 KTYLGRPWKQYSRTVYLQSELDSLVDPAGWLEWNGSFALDTLYYGEYMNTGPGAGTSGRV 269
K YLGRPWK YSRTV ++S LD + PAGWLEW+G FAL TLYYGEY NTG GAGTSGRV
Sbjct: 253 KVYLGRPWKAYSRTVVMESSLDRSITPAGWLEWSGQFALSTLYYGEYGNTGAGAGTSGRV 432
Query: 268 K 266
+
Sbjct: 433 E 435
Score = 44.6 bits (91), Expect(2) = 8e-034
Identities = 19/40 (47%), Positives = 24/40 (60%)
Frame = -1 / +3
Query: 259 GYRVITSAAEASAFTVGNFIDGDLWLAGTSIPFTTGL*AR 140
G S EA+ FTV +FI GD WL T + +T+GL* R
Sbjct: 444 GVHTSLSTVEATRFTVRDFILGDSWLGDTGVSYTSGL*VR 563
>gb|BJ249481.1|BJ249481 BJ249481 Y. Ogihara unpublished cDNA library, Wh_f Triticum
aestivum cDNA clone whf11b24 3', mRNA sequence
Length = 590
Score = 105 bits (224), Expect(2) = 8e-034
Identities = 41/62 (66%), Positives = 47/62 (75%)
Frame = -1 / -2
Query: 334 LDTLYYGEYMNTGPGAGTSGRVKWKGYRVITSAAEASAFTVGNFIDGDLWLAGTSIPFTT 155
L TLYYGEYMNTGPGAG GRV+W GY V S AEAS FTV FI+G++WL T + FT+
Sbjct: 352 LGTLYYGEYMNTGPGAGIGGRVRWPGYHVTMSPAEASNFTVAQFIEGNMWLPPTGVRFTS 173
Query: 154 GL 149
GL
Sbjct: 172 GL 167
Score = 73.9 bits (155), Expect(2) = 5e-021
Identities = 37/64 (57%), Positives = 40/64 (62%)
Frame = +3 / +3
Query: 144 AHKPVVKGMDVPASQRSPSMKLPTVKALASAALVMTRYPFHLTRPDVPAPGPVFMYSP** 323
A P V V S PSM TVK LASA L++T P HLT P +PAPGPVFMYSP*
Sbjct: 162 ASSPDVNLTPVGGSHMLPSMNCATVKLLASAGLIVTW*PGHLTLPPMPAPGPVFMYSP*X 341
Query: 324 SVSS 335
SV S
Sbjct: 342 SVPS 353
Score = 58.3 bits (121), Expect(2) = 8e-034
Identities = 19/34 (55%), Positives = 27/34 (79%)
Frame = -1 / -2
Query: 448 KTYLGRPWKQYSRTVYLQSELDSLVDPAGWLEWN 347
+T+LGRPWK YSR V++QS + ++V P GWL W+
Sbjct: 469 QTFLGRPWKAYSRVVFMQSYIGTVVRPEGWLAWD 368
Score = 46.9 bits (96), Expect(2) = 5e-021
Identities = 18/33 (54%), Positives = 21/33 (63%)
Frame = +3 / +3
Query: 342 LPFHSSQPAGSTSESSSDCRYTVREYCFHGRPR 440
L H+S P+G T+ DC T REY FHGRPR
Sbjct: 363 LSSHASHPSGRTTVPM*DCMNTTREYAFHGRPR 461
>gb|BJ249964.1|BJ249964 BJ249964 Y. Ogihara unpublished cDNA library, Wh_f Triticum
aestivum cDNA clone whf14j03 3', mRNA sequence
Length = 529
Score = 141 bits (303), Expect = 4e-033
Identities = 53/102 (51%), Positives = 67/102 (65%)
Frame = -1 / -1
Query: 454 RAKTYLGRPWKQYSRTVYLQSELDSLVDPAGWLEWNGSFALDTLYYGEYMNTGPGAGTSG 275
R +T+LGRPWK++SRT+Y+QSE+ L+DP GWL W G FAL T YY E N GPGA S
Sbjct: 382 RLRTFLGRPWKEHSRTLYIQSEIGDLIDPQGWLPWLGDFALSTCYYAEVDNRGPGADMSN 203
Query: 274 RVKWKGYRVITSAAEASAFTVGNFIDGDLWLAGTSIPFTTGL 149
RV WKG + +T +TV FI G LW++ +PF GL
Sbjct: 202 RVTWKGVKHVTYRQAEEKYTVERFIQGKLWISKYGVPFIPGL 77
>gb|BJ250058.1|BJ250058 BJ250058 Y. Ogihara unpublished cDNA library, Wh_f Triticum
aestivum cDNA clone whf14p02 3', mRNA sequence
Length = 721
Score = 141 bits (303), Expect = 4e-033
Identities = 53/102 (51%), Positives = 67/102 (65%)
Frame = -1 / -3
Query: 454 RAKTYLGRPWKQYSRTVYLQSELDSLVDPAGWLEWNGSFALDTLYYGEYMNTGPGAGTSG 275
R +T+LGRPWK++SRT+Y+QSE+ L+DP GWL W G FAL T YY E N GPGA S
Sbjct: 446 RLRTFLGRPWKEHSRTLYIQSEIGDLIDPQGWLPWLGDFALSTCYYAEVDNRGPGADMSN 267
Query: 274 RVKWKGYRVITSAAEASAFTVGNFIDGDLWLAGTSIPFTTGL 149
RV WKG + +T +TV FI G LW++ +PF GL
Sbjct: 266 RVTWKGVKHVTYRQAEEKYTVERFIQGKLWISKYGVPFIPGL 141
>emb|AX660696.1| Sequence 1053 from Patent WO03000906
Length = 573
Score = 87.2 bits (184), Expect(2) = 9e-032
Identities = 30/48 (62%), Positives = 38/48 (79%)
Frame = -1 / +3
Query: 448 KTYLGRPWKQYSRTVYLQSELDSLVDPAGWLEWNGSFALDTLYYGEYM 305
+T+LGRPWK YSRTV ++S + LVD GW+ W+G FALDTLYY EY+
Sbjct: 147 RTFLGRPWKNYSRTVVMESYIGGLVDATGWMPWSGDFALDTLYYAEYI 290
Score = 69.8 bits (146), Expect(2) = 9e-032
Identities = 27/52 (51%), Positives = 33/52 (63%)
Frame = -1 / +2
Query: 304 NTGPGAGTSGRVKWKGYRVITSAAEASAFTVGNFIDGDLWLAGTSIPFTTGL 149
N+GPGA T RV W GY V+ A+A FTV N + G WL T +PFT+GL
Sbjct: 290 NSGPGADTGRRVSWPGYHVLGDGADAGNFTVDNMVLGGNWLPQTGVPFTSGL 445
>emb|AX660733.1| Sequence 1090 from Patent WO03000906
Length = 712
Score = 120 bits (257), Expect(2) = 1e-031
Identities = 45/70 (64%), Positives = 51/70 (72%)
Frame = -1 / +1
Query: 445 TYLGRPWKQYSRTVYLQSELDSLVDPAGWLEWNGSFALDTLYYGEYMNTGPGAGTSGRVK 266
+YLGRPWK+YSRTV ++S + L+ P GW EW G L TLYY EY NTGPGAGTS RV
Sbjct: 160 SYLGRPWKEYSRTVVMESTIGDLIKPEGWSEWMGDLGLKTLYYAEYANTGPGAGTSKRVT 339
Query: 265 WKGYRVITSA 236
W GYRVI A
Sbjct: 340 WPGYRVIGQA 369
Score = 35.9 bits (72), Expect(2) = 1e-031
Identities = 15/32 (46%), Positives = 17/32 (53%)
Frame = -1 / +1
Query: 247 ITSAAEASAFTVGNFIDGDLWLAGTSIPFTTG 152
+ AEA+ FT G FIDG WL T P G
Sbjct: 355 VIGQAEATQFTAGVFIDGMSWLKNTGTPNVMG 450
>gb|BE425995.1|BE425995 WHE0326_A09_A18ZS Wheat unstressed seedling shoot cDNA library
Triticum aestivum cDNA clone WHE0326_A09_A18, mRNA
sequence
Length = 518
Score = 136 bits (292), Expect = 1e-031
Identities = 51/60 (85%), Positives = 56/60 (93%)
Frame = -1 / +3
Query: 448 KTYLGRPWKQYSRTVYLQSELDSLVDPAGWLEWNGSFALDTLYYGEYMNTGPGAGTSGRV 269
KTYLGRPWKQYSRTV++QSELDS+VDPAGWL W+G+FALDTLYY EY NTGPGAGTS RV
Sbjct: 339 KTYLGRPWKQYSRTVFMQSELDSVVDPAGWLAWDGTFALDTLYYAEYQNTGPGAGTSARV 518
Score = 114 bits (244), Expect = 5e-025
Identities = 49/60 (81%), Positives = 52/60 (86%)
Frame = +3 / -2
Query: 270 TRPDVPAPGPVFMYSP**SVSSAKLPFHSSQPAGSTSESSSDCRYTVREYCFHGRPR*VL 449
TR DVPAPGPVF YS **SVSSAK+P H+S PAGST+ SSSDC TVREYCFHGRPR*VL
Sbjct: 517 TRADVPAPGPVFWYSA**SVSSAKVPSHASHPAGSTTLSSSDCMKTVREYCFHGRPR*VL 338
>gb|CA604573.1|CA604573 wr1.pk0041.c12 wr1 Triticum aestivum cDNA clone wr1.pk0041.c12 5'
end, mRNA sequence
Length = 602
Score = 135 bits (289), Expect = 3e-031
Identities = 50/95 (52%), Positives = 63/95 (66%)
Frame = -1 / +1
Query: 448 KTYLGRPWKQYSRTVYLQSELDSLVDPAGWLEWNGSFALDTLYYGEYMNTGPGAGTSGRV 269
+T+LGRPWK YSRTV ++S + LVD GW+ W+G F LDTLYY EY N+GPGA T RV
Sbjct: 124 RTFLGRPWKNYSRTVVMESYIGGLVDATGWMPWSGDFXLDTLYYAEYNNSGPGADTGRRV 303
Query: 268 KWKGYRVITSAAEASAFTVGNFIDGDLWLAGTSIP 164
W GY V+ A+A TV + + G WL T +P
Sbjct: 304 SWPGYHVLGDGADAGNXTVDSMVLGGNWLPQTGVP 408
>gb|BJ254306.1|BJ254306 BJ254306 Y. Ogihara unpublished cDNA library, Wh_f Triticum
aestivum cDNA clone whf5d01 3', mRNA sequence
Length = 516
Score = 116 bits (249), Expect(2) = 1e-030
Identities = 44/70 (62%), Positives = 50/70 (71%)
Frame = -1 / -1
Query: 445 TYLGRPWKQYSRTVYLQSELDSLVDPAGWLEWNGSFALDTLYYGEYMNTGPGAGTSGRVK 266
+YLGRPWK+YSRTV ++S + L+ P GW EW G L TL Y EY NTGPGAGTS RV
Sbjct: 495 SYLGRPWKEYSRTVIMESTIGDLIKPEGWSEWMGDLGLKTLXYAEYANTGPGAGTSKRVT 316
Query: 265 WKGYRVITSA 236
W GYRVI A
Sbjct: 315 WPGYRVIGQA 286
Score = 35.9 bits (72), Expect(2) = 1e-030
Identities = 15/32 (46%), Positives = 17/32 (53%)
Frame = -1 / -1
Query: 247 ITSAAEASAFTVGNFIDGDLWLAGTSIPFTTG 152
+ AEA+ FT G FIDG WL T P G
Sbjct: 300 VIGQAEATQFTAGVFIDGMSWLKNTGTPNVMG 205
>gb|BJ254574.1|BJ254574 BJ254574 Y. Ogihara unpublished cDNA library, Wh_f Triticum
aestivum cDNA clone whf6d01 3', mRNA sequence
Length = 644
Score = 116 bits (249), Expect(2) = 1e-030
Identities = 44/70 (62%), Positives = 50/70 (71%)
Frame = -1 / -3
Query: 445 TYLGRPWKQYSRTVYLQSELDSLVDPAGWLEWNGSFALDTLYYGEYMNTGPGAGTSGRVK 266
+YLGRPWK+YSRTV ++S + L+ P GW EW G L TL Y EY NTGPGAGTS RV
Sbjct: 486 SYLGRPWKEYSRTVIMESTIGDLIKPEGWSEWMGDLGLKTLXYAEYANTGPGAGTSKRVT 307
Query: 265 WKGYRVITSA 236
W GYRVI A
Sbjct: 306 WPGYRVIGQA 277
Score = 35.9 bits (72), Expect(2) = 1e-030
Identities = 15/32 (46%), Positives = 17/32 (53%)
Frame = -1 / -3
Query: 247 ITSAAEASAFTVGNFIDGDLWLAGTSIPFTTG 152
+ AEA+ FT G FIDG WL T P G
Sbjct: 291 VIGQAEATQFTAGVFIDGMSWLKNTGTPNVMG 196
>gb|BJ285920.1|BJ285920 BJ285920 Y. Ogihara unpublished cDNA library, Wh_r Triticum
aestivum cDNA clone whr13h13 3', mRNA sequence
Length = 697
Score = 108 bits (230), Expect(2) = 4e-027
Identities = 39/67 (58%), Positives = 50/67 (74%)
Frame = -1 / -2
Query: 445 TYLGRPWKQYSRTVYLQSELDSLVDPAGWLEWNGSFALDTLYYGEYMNTGPGAGTSGRVK 266
+YLGRPWK++SR V ++S + + P G++ WNG FAL TLYY E+ N GPGAGTS RV
Sbjct: 534 SYLGRPWKEFSRLVIMESMIADFIKPEGYMPWNGDFALKTLYYAEFGNRGPGAGTSKRVT 355
Query: 265 WKGYRVI 245
W G+RVI
Sbjct: 354 WPGFRVI 334
Score = 33.1 bits (66), Expect(2) = 4e-027
Identities = 13/23 (56%), Positives = 14/23 (60%)
Frame = -1 / -2
Query: 232 EASAFTVGNFIDGDLWLAGTSIP 164
EA FT G FIDG WL T +P
Sbjct: 324 EAEQFTAGPFIDGATWLKFTGMP 256
>gb|BJ251714.1|BJ251714 BJ251714 Y. Ogihara unpublished cDNA library, Wh_f Triticum
aestivum cDNA clone whf20e17 3', mRNA sequence
Length = 632
Score = 108 bits (230), Expect(2) = 4e-027
Identities = 39/67 (58%), Positives = 50/67 (74%)
Frame = -1 / -1
Query: 445 TYLGRPWKQYSRTVYLQSELDSLVDPAGWLEWNGSFALDTLYYGEYMNTGPGAGTSGRVK 266
+YLGRPWK++SR V ++S + + P G++ WNG FAL TLYY E+ N GPGAGTS RV
Sbjct: 506 SYLGRPWKEFSRLVIMESMIADFIKPEGYMPWNGDFALKTLYYAEFGNRGPGAGTSKRVT 327
Query: 265 WKGYRVI 245
W G+RVI
Sbjct: 326 WPGFRVI 306
Score = 33.1 bits (66), Expect(2) = 4e-027
Identities = 13/23 (56%), Positives = 14/23 (60%)
Frame = -1 / -1
Query: 232 EASAFTVGNFIDGDLWLAGTSIP 164
EA FT G FIDG WL T +P
Sbjct: 296 EAEQFTAGPFIDGATWLKFTGMP 228
>gb|BJ251252.1|BJ251252 BJ251252 Y. Ogihara unpublished cDNA library, Wh_f Triticum
aestivum cDNA clone whf19e14 3', mRNA sequence
Length = 613
Score = 108 bits (230), Expect(2) = 4e-027
Identities = 39/67 (58%), Positives = 50/67 (74%)
Frame = -1 / -2
Query: 445 TYLGRPWKQYSRTVYLQSELDSLVDPAGWLEWNGSFALDTLYYGEYMNTGPGAGTSGRVK 266
+YLGRPWK++SR V ++S + + P G++ WNG FAL TLYY E+ N GPGAGTS RV
Sbjct: 495 SYLGRPWKEFSRLVIMESMIADFIKPEGYMPWNGDFALKTLYYAEFGNRGPGAGTSKRVT 316
Query: 265 WKGYRVI 245
W G+RVI
Sbjct: 315 WPGFRVI 295
Score = 33.1 bits (66), Expect(2) = 4e-027
Identities = 13/23 (56%), Positives = 14/23 (60%)
Frame = -1 / -2
Query: 232 EASAFTVGNFIDGDLWLAGTSIP 164
EA FT G FIDG WL T +P
Sbjct: 285 EAEQFTAGPFIDGATWLKFTGMP 217
>gb|BJ249930.1|BJ249930 BJ249930 Y. Ogihara unpublished cDNA library, Wh_f Triticum
aestivum cDNA clone whf14g15 3', mRNA sequence
Length = 712
Score = 106 bits (226), Expect(2) = 1e-026
Identities = 38/67 (56%), Positives = 49/67 (73%)
Frame = -1 / -3
Query: 445 TYLGRPWKQYSRTVYLQSELDSLVDPAGWLEWNGSFALDTLYYGEYMNTGPGAGTSGRVK 266
+YLGRPWK++SR V ++S + + P G++ WNG F L TLYY E+ N GPGAGTS RV
Sbjct: 527 SYLGRPWKEFSRLVIMESMIADFIKPEGYMPWNGDFGLKTLYYAEFGNRGPGAGTSKRVT 348
Query: 265 WKGYRVI 245
W G+RVI
Sbjct: 347 WPGFRVI 327
Score = 33.1 bits (66), Expect(2) = 1e-026
Identities = 13/23 (56%), Positives = 14/23 (60%)
Frame = -1 / -3
Query: 232 EASAFTVGNFIDGDLWLAGTSIP 164
EA FT G FIDG WL T +P
Sbjct: 317 EAEQFTAGPFIDGATWLKFTGMP 249
>gb|BJ250225.1|BJ250225 BJ250225 Y. Ogihara unpublished cDNA library, Wh_f Triticum
aestivum cDNA clone whf9k15 3', mRNA sequence
Length = 701
Score = 104 bits (222), Expect(2) = 5e-026
Identities = 37/67 (55%), Positives = 49/67 (73%)
Frame = -1 / -2
Query: 445 TYLGRPWKQYSRTVYLQSELDSLVDPAGWLEWNGSFALDTLYYGEYMNTGPGAGTSGRVK 266
++LGRPWK++SR V ++S + + P G++ WNG F L TLYY E+ N GPGAGTS RV
Sbjct: 538 SFLGRPWKEFSRLVIMESMIADFIKPEGYMPWNGDFGLKTLYYAEFGNRGPGAGTSKRVT 359
Query: 265 WKGYRVI 245
W G+RVI
Sbjct: 358 WPGFRVI 338
Score = 33.1 bits (66), Expect(2) = 5e-026
Identities = 13/23 (56%), Positives = 14/23 (60%)
Frame = -1 / -2
Query: 232 EASAFTVGNFIDGDLWLAGTSIP 164
EA FT G FIDG WL T +P
Sbjct: 328 EAEQFTAGPFIDGATWLKFTGMP 260
>gb|BJ251281.1|BJ251281 BJ251281 Y. Ogihara unpublished cDNA library, Wh_f Triticum
aestivum cDNA clone whf19g21 3', mRNA sequence
Length = 576
Score = 104 bits (221), Expect(2) = 6e-026
Identities = 37/67 (55%), Positives = 49/67 (73%)
Frame = -1 / -3
Query: 445 TYLGRPWKQYSRTVYLQSELDSLVDPAGWLEWNGSFALDTLYYGEYMNTGPGAGTSGRVK 266
++LGRPWK++SR V ++S + + P G++ WNG F L TLYY E+ N GPGAGTS RV
Sbjct: 508 SFLGRPWKEFSRLVIMESMIADFIKPEGYMPWNGDFGLKTLYYAEFGNHGPGAGTSKRVT 329
Query: 265 WKGYRVI 245
W G+RVI
Sbjct: 328 WPGFRVI 308
Score = 33.1 bits (66), Expect(2) = 6e-026
Identities = 13/23 (56%), Positives = 14/23 (60%)
Frame = -1 / -3
Query: 232 EASAFTVGNFIDGDLWLAGTSIP 164
EA FT G FIDG WL T +P
Sbjct: 298 EAEQFTAGPFIDGATWLKFTGMP 230
>gb|BJ249108.1|BJ249108 BJ249108 Y. Ogihara unpublished cDNA library, Wh_f Triticum
aestivum cDNA clone whf23g24 5', mRNA sequence
Length = 430
Score = 76.2 bits (160), Expect(2) = 9e-025
Identities = 28/45 (62%), Positives = 33/45 (73%)
Frame = -1 / +1
Query: 418 YSRTVYLQSELDSLVDPAGWLEWNGSFALDTLYYGEYMNTGPGAG 284
+SRT+Y+QSE+ L+DP GWL W G FAL T YY E N GPGAG
Sbjct: 1 HSRTLYIQSEIGDLIDPQGWLPWLGDFALTTCYYAEVDNRGPGAG 135
Score = 56.5 bits (117), Expect(2) = 9e-025
Identities = 22/50 (44%), Positives = 28/50 (56%)
Frame = -1 / +2
Query: 298 GPGAGTSGRVKWKGYRVITSAAEASAFTVGNFIDGDLWLAGTSIPFTTGL 149
GPGA S RV WKG + +T +TV FI G LW++ +PF GL
Sbjct: 128 GPGADMSNRVTWKGVKHVTYRQAQEKYTVERFIQGKLWISKYGVPFIPGL 277
>gb|AL822121.1|AL822121 AL822121 p:234 Triticum aestivum cDNA clone
A09_p234_plate_20_run_2, mRNA sequence
Length = 576
Score = 111 bits (237), Expect = 5e-024
Identities = 41/68 (60%), Positives = 50/68 (73%)
Frame = -1 / +2
Query: 448 KTYLGRPWKQYSRTVYLQSELDSLVDPAGWLEWNGSFALDTLYYGEYMNTGPGAGTSGRV 269
+T+LGRPWK YSRTV ++S + LVD AGW+ W+G FALDTLYY Y N+GPGA RV
Sbjct: 368 RTFLGRPWKNYSRTVVMESYIGWLVDAAGWMPWSGDFALDTLYYA*YNNSGPGADAGRRV 547
Query: 268 KWKGYRVI 245
W GY V+
Sbjct: 548 TWPGYHVL 571
>gb|CD452428.1|CD452428 WHE1103_D06_H11ZT CS wheat etiolated seedling root normalized cDNA
library Triticum aestivum cDNA clone WHE1103_D06_H11,
mRNA sequence
Length = 357
Score = 110 bits (235), Expect = 9e-024
Identities = 41/72 (56%), Positives = 49/72 (68%)
Frame = -1 / -2
Query: 364 GWLEWNGSFALDTLYYGEYMNTGPGAGTSGRVKWKGYRVITSAAEASAFTVGNFIDGDLW 185
GW+ W+G FALDTLYY EY N+GPGA T RV W GY V+ A+A FTV N + G W
Sbjct: 356 GWMPWSGDFALDTLYYAEYNNSGPGADTGRRVSWPGYHVLGDGADAGNFTVDNMVLGGNW 177
Query: 184 LAGTSIPFTTGL 149
L T +PFT+GL
Sbjct: 176 LPQTGVPFTSGL 141
>gb|CK210460.1|CK210460 FGAS022276 Triticum aestivum FGAS: Library 5 GATE 7 Triticum
aestivum cDNA, mRNA sequence
Length = 1102
Score = 110 bits (234), Expect = 1e-023
Identities = 39/51 (76%), Positives = 46/51 (90%)
Frame = -1 / +3
Query: 445 TYLGRPWKQYSRTVYLQSELDSLVDPAGWLEWNGSFALDTLYYGEYMNTGP 293
+YLGRPWK YSRTV++QS+++SLV P GWLEWNG+FALDTLYY EYMN GP
Sbjct: 753 SYLGRPWKTYSRTVFMQSKMESLVHPRGWLEWNGTFALDTLYYAEYMNRGP 905
>gb|BE606718.1|BE606718 WHE0907_G06_N11ZS Wheat 5-15 DAP spike cDNA library Triticum
aestivum cDNA clone WHE0907_G06_N11, mRNA sequence
Length = 479
Score = 106 bits (227), Expect = 1e-022
Identities = 39/46 (84%), Positives = 44/46 (95%)
Frame = -1 / +3
Query: 448 KTYLGRPWKQYSRTVYLQSELDSLVDPAGWLEWNGSFALDTLYYGE 311
KTYLGRPWKQYSRTV++QSELDS+VDPAGWL W+G+FALDTLYY E
Sbjct: 342 KTYLGRPWKQYSRTVFIQSELDSVVDPAGWLAWDGTFALDTLYYAE 479
>gb|BJ244140.1|BJ244140 BJ244140 Y. Ogihara unpublished cDNA library, Wh_f Triticum
aestivum cDNA clone whf14g15 5', mRNA sequence
Length = 591
Score = 106 bits (226), Expect = 2e-022
Identities = 38/67 (56%), Positives = 49/67 (73%)
Frame = -1 / +3
Query: 445 TYLGRPWKQYSRTVYLQSELDSLVDPAGWLEWNGSFALDTLYYGEYMNTGPGAGTSGRVK 266
+YLGRPWK++SR V ++S + + P G++ WNG F L TLYY E+ N GPGAGTS RV
Sbjct: 333 SYLGRPWKEFSRLVIMESMIADFIKPEGYMPWNGDFGLKTLYYAEFGNRGPGAGTSKRVT 512
Query: 265 WKGYRVI 245
W G+RVI
Sbjct: 513 WPGFRVI 533
>gb|CA619106.1|CA619106 wl1n.pk0040.d6 wl1n Triticum aestivum cDNA clone wl1n.pk0040.d6 5'
end, mRNA sequence
Length = 468
Score = 106 bits (226), Expect = 2e-022
Identities = 43/53 (81%), Positives = 47/53 (88%)
Frame = -1 / +1
Query: 304 NTGPGAGTSGRVKWKGYRVITSAAEASAFTVGNFIDGDLWLAGTSIPFTTGL* 146
NTGPGAGTSGRV W GYR I SA+EAS FTVG+FIDGD+WLAGTSIPF+ GL*
Sbjct: 4 NTGPGAGTSGRVSWMGYRGIISASEASTFTVGSFIDGDVWLAGTSIPFSGGL* 162
>gb|BE442559.1|BE442559 WHE1103_D06_H11ZS Wheat etiolated seedling root normalized cDNA
library Triticum aestivum cDNA clone WHE1103_D06_H11,
mRNA sequence
Length = 347
Score = 102 bits (217), Expect = 3e-021
Identities = 39/68 (57%), Positives = 46/68 (67%)
Frame = -1 / +1
Query: 352 WNGSFALDTLYYGEYMNTGPGAGTSGRVKWKGYRVITSAAEASAFTVGNFIDGDLWLAGT 173
W+G FALDTLYY EY N+GPGA T RV W GY V+ A+A FTV N + G WL T
Sbjct: 4 WSGDFALDTLYYAEYNNSGPGADTGRRVSWPGYHVLGDGADAGNFTVDNMVLGGNWLPQT 183
Query: 172 SIPFTTGL 149
+PFT+GL
Sbjct: 184 GVPFTSGL 207
Database: Triticum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 3:01 PM
Number of letters in database: 367,240,239
Number of sequences in database: 636,343
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 379,421,745
Number of Sequences: 636343
Number of extensions: 5189492
Number of successful extensions: 216833
Number of sequences better than 1.0e-020: 47
length of database: 122,413,413
effective HSP length: 52
effective length of database: 89,323,577
effective search space used: 8843034123
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)