TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3115184.2.2
(682 letters)
Database: Triticum_nucl_with_EST.fasta
636,343 sequences; 367,240,239 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BJ248931.1|BJ248931 BJ248931 Y. Ogihara unpublished cDNA... 165 3e-076
gb|BJ253558.1|BJ253558 BJ253558 Y. Ogihara unpublished cDNA... 161 5e-076
gb|BJ246629.1|BJ246629 BJ246629 Y. Ogihara unpublished cDNA... 160 1e-075
gb|BJ252567.1|BJ252567 BJ252567 Y. Ogihara unpublished cDNA... 147 9e-072
gb|BJ251356.1|BJ251356 BJ251356 Y. Ogihara unpublished cDNA... 141 2e-054
gb|BJ245473.1|BJ245473 BJ245473 Y. Ogihara unpublished cDNA... 141 3e-053
gb|BJ249864.1|BJ249864 BJ249864 Y. Ogihara unpublished cDNA... 147 7e-053
gb|CA741798.1|CA741798 wia1c.pk003.h2 wia1c Triticum aestiv... 135 1e-032
gb|BJ264150.1|BJ264150 BJ264150 Y. Ogihara unpublished cDNA... 126 4e-032
gb|BJ266660.1|BJ266660 BJ266660 Y. Ogihara unpublished cDNA... 126 4e-032
gb|BJ244077.1|BJ244077 BJ244077 Y. Ogihara unpublished cDNA... 135 6e-031
gb|CD454470.1|CD454470 WHE2319_C03_F05ZT CS wheat pre-anthe... 132 4e-030
gb|BJ253848.1|BJ253848 BJ253848 Y. Ogihara unpublished cDNA... 91 4e-029
gb|CD454818.1|CD454818 WHE3454_A04_B08ZT CS wheat pre-anthe... 88 6e-029
gb|BJ266186.1|BJ266186 BJ266186 Y. Ogihara unpublished cDNA... 99 5e-027
gb|BJ249502.1|BJ249502 BJ249502 Y. Ogihara unpublished cDNA... 112 4e-024
gb|CD454595.1|CD454595 WHE2329_A04_A07ZT CS wheat pre-anthe... 95 2e-023
gb|CD896287.1|CD896287 G174.102G03R011120 G174 Triticum aes... 59 3e-023
gb|BJ255300.1|BJ255300 BJ255300 Y. Ogihara unpublished cDNA... 68 4e-023
>gb|BJ248931.1|BJ248931 BJ248931 Y. Ogihara unpublished cDNA library, Wh_f Triticum
aestivum cDNA clone whf8k17 5', mRNA sequence
Length = 556
Score = 165 bits (354), Expect(2) = 3e-076
Identities = 64/86 (74%), Positives = 75/86 (87%)
Frame = +1 / +3
Query: 1 GISVGSLGRYKDEKDVEDVQVTGCTIAGTTNGLRIKSYEDSKSSLKASKFLYEGITMDNV 180
GISVGSLGRYKDEKDVED+QVT CTI G TNGLRIKSYEDSKS+L+A++F+Y+ + MDNV
Sbjct: 27 GISVGSLGRYKDEKDVEDIQVTNCTIKGATNGLRIKSYEDSKSALRATRFVYDDVKMDNV 206
Query: 181 SYPIIIDQKYCPNNICVKSGASKVAV 258
SYPI+IDQKYCPNNIC K+ + V
Sbjct: 207 SYPIVIDQKYCPNNICAKAPGASKVV 284
Score = 141 bits (302), Expect(2) = 3e-076
Identities = 55/76 (72%), Positives = 66/76 (86%)
Frame = +1 / +3
Query: 238 GASKVAVNDVVFKNIHGTSNTPEAITLNCANNLPCQGVQLVNVDIKYNGSGNKTMAVCKN 417
GASKV V D+VFKNI GTS TPEA+TLNC NN+PCQG+QLVNV++KY G+ NKTMAVCKN
Sbjct: 267 GASKVVVADIVFKNIVGTSATPEAVTLNCVNNVPCQGLQLVNVNLKYTGTNNKTMAVCKN 446
Query: 418 AIGKSIGLAKELACI* 465
A+G S+ + KELAC+*
Sbjct: 447 AVGTSVNVVKELACL* 494
Score = 116 bits (249), Expect(2) = 9e-046
Identities = 54/83 (65%), Positives = 57/83 (68%)
Frame = -3 / -1
Query: 464 QMHASSFAKPMDLPMAFLQTAMVLLPDPLYLMSTLTSCTPWHGRLLAQLSVMASGVLEVP 285
Q HASS D+P AFLQTAMVLL P+YL TLTSC PW G LL QLSV ASGV EVP
Sbjct: 493 QRHASSLTTLTDVPTAFLQTAMVLLFVPVYLRLTLTSCRPWQGTLLTQLSVTASGVAEVP 314
Query: 284 WMFLKTTSLTATLEAPDLTQMLL 216
MFLKT S T TLEAP +L
Sbjct: 313 TMFLKTMSATTTLEAPGALAQML 245
Score = 92.3 bits (195), Expect(2) = 1e-025
Identities = 44/65 (67%), Positives = 48/65 (73%)
Frame = -2 / -3
Query: 465 SNARQLLCQADGLADGILADGHGLVAGSIVLDVDVDELHALAWQVVGAVERDGLRRVGGA 286
S A +LL DG ADG+LADGHGLV + VL+VDVDEL ALA VV AVERDGL R GG
Sbjct: 494 SEACELLDDVDGRADGVLADGHGLVVRAGVLEVDVDELQALAGHVVDAVERDGLGRGGGP 315
Query: 285 VDVLE 271
DVLE
Sbjct: 314 DDVLE 300
Score = 89.5 bits (189), Expect(2) = 3e-029
Identities = 40/70 (57%), Positives = 48/70 (68%)
Frame = +3 / +2
Query: 276 EHPRHLQHAGGHHAQLRQQPAMPGRAARQRRHQVQWIRQQDHGRLQECHRQVHRLGKGAG 455
EH R L+HA G HAQLRQQ A+PG AARQR+ QV QQDHGRLQE R V + +GA
Sbjct: 305 EHRRDLRHARGRHAQLRQQRALPGPAARQRQPQVHRHEQQDHGRLQERRRHVRQRRQGAR 484
Query: 456 VHLNQLTNMH 485
+ L + T+ H
Sbjct: 485 MPLTRTTHAH 514
Score = 87.7 bits (185), Expect(2) = 9e-046
Identities = 39/58 (67%), Positives = 43/58 (74%)
Frame = -3 / -1
Query: 233 LTQMLLGQYFWSMMMG*ETLSMVMPSYRNLLALSDDLESSYDLMRRPFVVPAIVHPVT 60
L QMLLGQYFWSM MG*ETLS+ SY +ALS DLESSYDL+R P V P +V VT
Sbjct: 259 LAQMLLGQYFWSMTMG*ETLSIFTSSYTKRVALSADLESSYDLIRSPLVAPLMVQLVT 86
Score = 59.7 bits (124), Expect(2) = 3e-029
Identities = 30/71 (42%), Positives = 35/71 (49%)
Frame = +3 / +2
Query: 3 HQRRQPGALQXXXXXXXXXXXXVHDRRHHERPAHQVVRGLQVVAQGQQVPVRXXXXXXXX 182
HQR QPGA+Q +H + H+R QVVRGLQV AQG + VR
Sbjct: 29 HQRGQPGAVQGREGRGGHPGDQLHHQGRHQRAPDQVVRGLQVGAQGHPLRVRRRENGQRL 208
Query: 183 XXXXXRPEVLP 215
RPEVLP
Sbjct: 209 LPHRHRPEVLP 241
Score = 44.6 bits (91), Expect(2) = 1e-025
Identities = 18/30 (60%), Positives = 20/30 (66%)
Frame = -1 / -2
Query: 175 CPW*CPRTGTCWP*ATTWSPRTT*CAGRSW 86
CP+ RT + WP*A TWSPRTT* R W
Sbjct: 201 CPFSRRRTRSGWP*APTWSPRTT*SGARWW 112
>gb|BJ253558.1|BJ253558 BJ253558 Y. Ogihara unpublished cDNA library, Wh_f Triticum
aestivum cDNA clone whf2g18 3', mRNA sequence
Length = 634
Score = 161 bits (347), Expect(2) = 5e-076
Identities = 63/86 (73%), Positives = 74/86 (86%)
Frame = +1 / -2
Query: 1 GISVGSLGRYKDEKDVEDVQVTGCTIAGTTNGLRIKSYEDSKSSLKASKFLYEGITMDNV 180
GISVGSLGRYKDEK VED+QVT CTI G TNGLRIKSYEDSKS+L+A++F+Y+ + MDNV
Sbjct: 582 GISVGSLGRYKDEKXVEDIQVTNCTIKGATNGLRIKSYEDSKSALRATRFVYDDVRMDNV 403
Query: 181 SYPIIIDQKYCPNNICVKSGASKVAV 258
SYPI+IDQKYCPNNIC K+ + V
Sbjct: 402 SYPIVIDQKYCPNNICAKAPGASKVV 325
Score = 144 bits (308), Expect(2) = 5e-076
Identities = 56/76 (73%), Positives = 67/76 (88%)
Frame = +1 / -2
Query: 238 GASKVAVNDVVFKNIHGTSNTPEAITLNCANNLPCQGVQLVNVDIKYNGSGNKTMAVCKN 417
GASKV V D+VFKNI GTS TPEA+TLNC NN+PCQG+QLVNV++KY G+ NKTMAVCKN
Sbjct: 342 GASKVVVADIVFKNIVGTSATPEAVTLNCVNNVPCQGLQLVNVNLKYTGTNNKTMAVCKN 163
Query: 418 AIGKSIGLAKELACI* 465
A+GKS+ + KELAC+*
Sbjct: 162 AVGKSVNVVKELACL* 115
Score = 113 bits (242), Expect(2) = 3e-044
Identities = 55/88 (62%), Positives = 58/88 (65%)
Frame = -3 / +2
Query: 479 VSQLVQMHASSFAKPMDLPMAFLQTAMVLLPDPLYLMSTLTSCTPWHGRLLAQLSVMASG 300
V L Q HASS DLP AFLQTAMVLL P+YL TLTS PW G LL QLSV ASG
Sbjct: 101 VRGLSQRHASSLTTLTDLPTAFLQTAMVLLLVPVYLRLTLTSWRPWQGTLLTQLSVTASG 280
Query: 299 VLEVPWMFLKTTSLTATLEAPDLTQMLL 216
V +VP MFLKT S T TLEAP +L
Sbjct: 281 VADVPTMFLKTMSATTTLEAPGALAQML 364
Score = 94.5 bits (200), Expect(2) = 5e-025
Identities = 45/65 (69%), Positives = 49/65 (75%)
Frame = -2 / +1
Query: 465 SNARQLLCQADGLADGILADGHGLVAGSIVLDVDVDELHALAWQVVGAVERDGLRRVGGA 286
S A +LL DGLADG+LADGHGLV G+ VL+VDVDEL ALA VV AVERDGLRR
Sbjct: 115 SEACELLDDVDGLADGVLADGHGLVVGAGVLEVDVDELEALAGHVVDAVERDGLRRRRRP 294
Query: 285 VDVLE 271
DVLE
Sbjct: 295 DDVLE 309
Score = 85.8 bits (181), Expect(2) = 3e-044
Identities = 38/58 (65%), Positives = 43/58 (74%)
Frame = -3 / +2
Query: 233 LTQMLLGQYFWSMMMG*ETLSMVMPSYRNLLALSDDLESSYDLMRRPFVVPAIVHPVT 60
L QMLLGQYFWSM MG*ETLS++ SY +A S DLESSYDL+R P V P +V VT
Sbjct: 350 LAQMLLGQYFWSMTMG*ETLSILTSSYTKRVARSADLESSYDLIRSPLVAPLMVQLVT 523
Score = 85.4 bits (180), Expect(2) = 4e-026
Identities = 39/68 (57%), Positives = 47/68 (69%)
Frame = +3 / -1
Query: 276 EHPRHLQHAGGHHAQLRQQPAMPGRAARQRRHQVQWIRQQDHGRLQECHRQVHRLGKGAG 455
EH R + AGG HAQLRQQ A+PG ARQR+ QV +QQDHGRLQE RQV + +GA
Sbjct: 304 EHRRDVGDAGGRHAQLRQQRALPGPPARQRQPQVHRHQQQDHGRLQERRRQVRQRRQGAR 125
Query: 456 VHLNQLTN 479
+ L Q T+
Sbjct: 124 MPLTQATH 101
Score = 53.3 bits (110), Expect(2) = 4e-026
Identities = 29/70 (41%), Positives = 34/70 (48%)
Frame = +3 / -1
Query: 6 QRRQPGALQXXXXXXXXXXXXVHDRRHHERPAHQVVRGLQVVAQGQQVPVRXXXXXXXXX 185
QR QPGA+Q +H + H+R QVVRGLQV A G + VR
Sbjct: 577 QRGQPGAVQGREXRGGHPGDQLHHQGRHQRAPDQVVRGLQVGAPGHPLRVRRREDGQRLL 398
Query: 186 XXXXRPEVLP 215
RPEVLP
Sbjct: 397 PHRHRPEVLP 368
Score = 40.5 bits (82), Expect(2) = 5e-025
Identities = 17/30 (56%), Positives = 18/30 (60%)
Frame = -1 / +3
Query: 175 CPW*CPRTGTCWP*ATTWSPRTT*CAGRSW 86
CP RT + WP A TWSPRTT* R W
Sbjct: 408 CPSSRRRTRSGWPGAPTWSPRTT*SGARWW 497
>gb|BJ246629.1|BJ246629 BJ246629 Y. Ogihara unpublished cDNA library, Wh_f Triticum
aestivum cDNA clone whf24o17 5', mRNA sequence
Length = 656
Score = 160 bits (344), Expect(2) = 1e-075
Identities = 62/84 (73%), Positives = 73/84 (86%)
Frame = +1 / +1
Query: 7 SVGSLGRYKDEKDVEDVQVTGCTIAGTTNGLRIKSYEDSKSSLKASKFLYEGITMDNVSY 186
SVGSLGRYKDEKDVED+QVT CTI G TNGLRIKSYEDSKS+L+A++F+Y+ + MDNVSY
Sbjct: 1 SVGSLGRYKDEKDVEDIQVTNCTIKGATNGLRIKSYEDSKSALRATRFVYDDVRMDNVSY 180
Query: 187 PIIIDQKYCPNNICVKSGASKVAV 258
PI+IDQKYCPNNIC K+ + V
Sbjct: 181 PIVIDQKYCPNNICAKAPGASKVV 252
Score = 144 bits (308), Expect(2) = 1e-075
Identities = 56/76 (73%), Positives = 67/76 (88%)
Frame = +1 / +1
Query: 238 GASKVAVNDVVFKNIHGTSNTPEAITLNCANNLPCQGVQLVNVDIKYNGSGNKTMAVCKN 417
GASKV V D+VFKNI GTS TPEA+TLNC NN+PCQG+QLVNV++KY G+ NKTMAVCKN
Sbjct: 235 GASKVVVADIVFKNIVGTSATPEAVTLNCVNNVPCQGLQLVNVNLKYTGTNNKTMAVCKN 414
Query: 418 AIGKSIGLAKELACI* 465
A+GKS+ + KELAC+*
Sbjct: 415 AVGKSVNVVKELACL* 462
Score = 113 bits (242), Expect(2) = 3e-044
Identities = 55/88 (62%), Positives = 58/88 (65%)
Frame = -3 / -1
Query: 479 VSQLVQMHASSFAKPMDLPMAFLQTAMVLLPDPLYLMSTLTSCTPWHGRLLAQLSVMASG 300
V L Q HASS DLP AFLQTAMVLL P+YL TLTS PW G LL QLSV ASG
Sbjct: 476 VRGLSQRHASSLTTLTDLPTAFLQTAMVLLLVPVYLRLTLTSWRPWQGTLLTQLSVTASG 297
Query: 299 VLEVPWMFLKTTSLTATLEAPDLTQMLL 216
V +VP MFLKT S T TLEAP +L
Sbjct: 296 VADVPTMFLKTMSATTTLEAPGALAQML 213
Score = 94.5 bits (200), Expect(2) = 5e-025
Identities = 45/65 (69%), Positives = 49/65 (75%)
Frame = -2 / -3
Query: 465 SNARQLLCQADGLADGILADGHGLVAGSIVLDVDVDELHALAWQVVGAVERDGLRRVGGA 286
S A +LL DGLADG+LADGHGLV G+ VL+VDVDEL ALA VV AVERDGLRR
Sbjct: 462 SEACELLDDVDGLADGVLADGHGLVVGAGVLEVDVDELEALAGHVVDAVERDGLRRRRRP 283
Query: 285 VDVLE 271
DVLE
Sbjct: 282 DDVLE 268
Score = 85.8 bits (181), Expect(2) = 3e-044
Identities = 38/58 (65%), Positives = 43/58 (74%)
Frame = -3 / -1
Query: 233 LTQMLLGQYFWSMMMG*ETLSMVMPSYRNLLALSDDLESSYDLMRRPFVVPAIVHPVT 60
L QMLLGQYFWSM MG*ETLS++ SY +A S DLESSYDL+R P V P +V VT
Sbjct: 227 LAQMLLGQYFWSMTMG*ETLSILTSSYTKRVARSADLESSYDLIRSPLVAPLMVQLVT 54
Score = 85.4 bits (180), Expect(2) = 2e-025
Identities = 39/68 (57%), Positives = 47/68 (69%)
Frame = +3 / +3
Query: 276 EHPRHLQHAGGHHAQLRQQPAMPGRAARQRRHQVQWIRQQDHGRLQECHRQVHRLGKGAG 455
EH R + AGG HAQLRQQ A+PG ARQR+ QV +QQDHGRLQE RQV + +GA
Sbjct: 273 EHRRDVGDAGGRHAQLRQQRALPGPPARQRQPQVHRHQQQDHGRLQERRRQVRQRRQGAR 452
Query: 456 VHLNQLTN 479
+ L Q T+
Sbjct: 453 MPLTQATH 476
Score = 51.0 bits (105), Expect(2) = 2e-025
Identities = 27/69 (39%), Positives = 32/69 (46%)
Frame = +3 / +3
Query: 9 RRQPGALQXXXXXXXXXXXXVHDRRHHERPAHQVVRGLQVVAQGQQVPVRXXXXXXXXXX 188
R QPGA+Q +H + H+R QVVRGLQV A G + VR
Sbjct: 3 RGQPGAVQGREGRGGHPGDQLHHQGRHQRAPDQVVRGLQVGAPGHPLRVRRREDGQRLLP 182
Query: 189 XXXRPEVLP 215
RPEVLP
Sbjct: 183 HRHRPEVLP 209
Score = 40.5 bits (82), Expect(2) = 5e-025
Identities = 17/30 (56%), Positives = 18/30 (60%)
Frame = -1 / -2
Query: 175 CPW*CPRTGTCWP*ATTWSPRTT*CAGRSW 86
CP RT + WP A TWSPRTT* R W
Sbjct: 169 CPSSRRRTRSGWPGAPTWSPRTT*SGARWW 80
>gb|BJ252567.1|BJ252567 BJ252567 Y. Ogihara unpublished cDNA library, Wh_f Triticum
aestivum cDNA clone whf24o17 3', mRNA sequence
Length = 612
Score = 147 bits (316), Expect(2) = 9e-072
Identities = 56/78 (71%), Positives = 67/78 (85%)
Frame = +1 / -2
Query: 25 RYKDEKDVEDVQVTGCTIAGTTNGLRIKSYEDSKSSLKASKFLYEGITMDNVSYPIIIDQ 204
RYKDEKDVED+QVT CTI G TNGLRIKSYEDSKS+L+A++F+Y+ + MDNVSYPI+IDQ
Sbjct: 611 RYKDEKDVEDIQVTNCTIKGATNGLRIKSYEDSKSALRATRFVYDDVRMDNVSYPIVIDQ 432
Query: 205 KYCPNNICVKSGASKVAV 258
KYCPNNIC K+ + V
Sbjct: 431 KYCPNNICAKAPGASKVV 378
Score = 144 bits (308), Expect(2) = 9e-072
Identities = 56/76 (73%), Positives = 67/76 (88%)
Frame = +1 / -2
Query: 238 GASKVAVNDVVFKNIHGTSNTPEAITLNCANNLPCQGVQLVNVDIKYNGSGNKTMAVCKN 417
GASKV V D+VFKNI GTS TPEA+TLNC NN+PCQG+QLVNV++KY G+ NKTMAVCKN
Sbjct: 395 GASKVVVADIVFKNIVGTSATPEAVTLNCVNNVPCQGLQLVNVNLKYTGTNNKTMAVCKN 216
Query: 418 AIGKSIGLAKELACI* 465
A+GKS+ + KELAC+*
Sbjct: 215 AVGKSVNVVKELACL* 168
Score = 113 bits (242), Expect(2) = 3e-044
Identities = 55/88 (62%), Positives = 58/88 (65%)
Frame = -3 / +1
Query: 479 VSQLVQMHASSFAKPMDLPMAFLQTAMVLLPDPLYLMSTLTSCTPWHGRLLAQLSVMASG 300
V L Q HASS DLP AFLQTAMVLL P+YL TLTS PW G LL QLSV ASG
Sbjct: 154 VRGLSQRHASSLTTLTDLPTAFLQTAMVLLLVPVYLRLTLTSWRPWQGTLLTQLSVTASG 333
Query: 299 VLEVPWMFLKTTSLTATLEAPDLTQMLL 216
V +VP MFLKT S T TLEAP +L
Sbjct: 334 VADVPTMFLKTMSATTTLEAPGALAQML 417
Score = 94.5 bits (200), Expect(2) = 5e-025
Identities = 45/65 (69%), Positives = 49/65 (75%)
Frame = -2 / +3
Query: 465 SNARQLLCQADGLADGILADGHGLVAGSIVLDVDVDELHALAWQVVGAVERDGLRRVGGA 286
S A +LL DGLADG+LADGHGLV G+ VL+VDVDEL ALA VV AVERDGLRR
Sbjct: 168 SEACELLDDVDGLADGVLADGHGLVVGAGVLEVDVDELEALAGHVVDAVERDGLRRRRRP 347
Query: 285 VDVLE 271
DVLE
Sbjct: 348 DDVLE 362
Score = 85.8 bits (181), Expect(2) = 3e-044
Identities = 38/58 (65%), Positives = 43/58 (74%)
Frame = -3 / +1
Query: 233 LTQMLLGQYFWSMMMG*ETLSMVMPSYRNLLALSDDLESSYDLMRRPFVVPAIVHPVT 60
L QMLLGQYFWSM MG*ETLS++ SY +A S DLESSYDL+R P V P +V VT
Sbjct: 403 LAQMLLGQYFWSMTMG*ETLSILTSSYTKRVARSADLESSYDLIRSPLVAPLMVQLVT 576
Score = 85.4 bits (180), Expect(2) = 6e-023
Identities = 39/68 (57%), Positives = 47/68 (69%)
Frame = +3 / -1
Query: 276 EHPRHLQHAGGHHAQLRQQPAMPGRAARQRRHQVQWIRQQDHGRLQECHRQVHRLGKGAG 455
EH R + AGG HAQLRQQ A+PG ARQR+ QV +QQDHGRLQE RQV + +GA
Sbjct: 357 EHRRDVGDAGGRHAQLRQQRALPGPPARQRQPQVHRHQQQDHGRLQERRRQVRQRRQGAR 178
Query: 456 VHLNQLTN 479
+ L Q T+
Sbjct: 177 MPLTQATH 154
Score = 42.8 bits (87), Expect(2) = 6e-023
Identities = 21/49 (42%), Positives = 25/49 (51%)
Frame = +3 / -1
Query: 69 VHDRRHHERPAHQVVRGLQVVAQGQQVPVRXXXXXXXXXXXXXRPEVLP 215
+H + H+R QVVRGLQV A G + VR RPEVLP
Sbjct: 567 LHHQGRHQRAPDQVVRGLQVGAPGHPLRVRRREDGQRLLPHRHRPEVLP 421
Score = 40.5 bits (82), Expect(2) = 5e-025
Identities = 17/30 (56%), Positives = 18/30 (60%)
Frame = -1 / +2
Query: 175 CPW*CPRTGTCWP*ATTWSPRTT*CAGRSW 86
CP RT + WP A TWSPRTT* R W
Sbjct: 461 CPSSRRRTRSGWPGAPTWSPRTT*SGARWW 550
>gb|BJ251356.1|BJ251356 BJ251356 Y. Ogihara unpublished cDNA library, Wh_f Triticum
aestivum cDNA clone whf19m10 3', mRNA sequence
Length = 531
Score = 141 bits (302), Expect(2) = 2e-054
Identities = 55/76 (72%), Positives = 66/76 (86%)
Frame = +1 / -2
Query: 238 GASKVAVNDVVFKNIHGTSNTPEAITLNCANNLPCQGVQLVNVDIKYNGSGNKTMAVCKN 417
GASKV V D+VFKNI GTS TPEA+TLNC NN+PCQG+QLVNV++KY G+ NKTMAVCKN
Sbjct: 392 GASKVVVADIVFKNIVGTSATPEAVTLNCVNNVPCQGLQLVNVNLKYTGTNNKTMAVCKN 213
Query: 418 AIGKSIGLAKELACI* 465
A+G S+ + KELAC+*
Sbjct: 212 AVGTSVNVVKELACL* 165
Score = 116 bits (249), Expect(2) = 2e-041
Identities = 54/83 (65%), Positives = 57/83 (68%)
Frame = -3 / +1
Query: 464 QMHASSFAKPMDLPMAFLQTAMVLLPDPLYLMSTLTSCTPWHGRLLAQLSVMASGVLEVP 285
Q HASS D+P AFLQTAMVLL P+YL TLTSC PW G LL QLSV ASGV EVP
Sbjct: 166 QRHASSLTTLTDVPTAFLQTAMVLLFVPVYLRLTLTSCRPWQGTLLTQLSVTASGVAEVP 345
Query: 284 WMFLKTTSLTATLEAPDLTQMLL 216
MFLKT S T TLEAP +L
Sbjct: 346 TMFLKTMSATTTLEAPGALAQML 414
Score = 92.7 bits (196), Expect(2) = 2e-054
Identities = 34/52 (65%), Positives = 44/52 (84%)
Frame = +1 / -2
Query: 103 IKSYEDSKSSLKASKFLYEGITMDNVSYPIIIDQKYCPNNICVKSGASKVAV 258
IKSYEDSKS+L+A++F+Y+ + MDNVSYPI+IDQKYCPNNIC K+ + V
Sbjct: 530 IKSYEDSKSALRATRFVYDDVKMDNVSYPIVIDQKYCPNNICAKAPGASKVV 375
Score = 92.3 bits (195), Expect(2) = 6e-024
Identities = 44/65 (67%), Positives = 48/65 (73%)
Frame = -2 / +3
Query: 465 SNARQLLCQADGLADGILADGHGLVAGSIVLDVDVDELHALAWQVVGAVERDGLRRVGGA 286
S A +LL DG ADG+LADGHGLV + VL+VDVDEL ALA VV AVERDGL R GG
Sbjct: 165 SEACELLDDVDGRADGVLADGHGLVVRAGVLEVDVDELQALAGHVVDAVERDGLGRGGGP 344
Query: 285 VDVLE 271
DVLE
Sbjct: 345 DDVLE 359
Score = 89.5 bits (189), Expect(2) = 2e-022
Identities = 40/70 (57%), Positives = 48/70 (68%)
Frame = +3 / -1
Query: 276 EHPRHLQHAGGHHAQLRQQPAMPGRAARQRRHQVQWIRQQDHGRLQECHRQVHRLGKGAG 455
EH R L+HA G HAQLRQQ A+PG AARQR+ QV QQDHGRLQE R V + +GA
Sbjct: 354 EHRRDLRHARGRHAQLRQQRALPGPAARQRQPQVHRHEQQDHGRLQERRRHVRQRRQGAR 175
Query: 456 VHLNQLTNMH 485
+ L + T+ H
Sbjct: 174 MPLTRTTHAH 145
Score = 73.0 bits (153), Expect(2) = 2e-041
Identities = 32/44 (72%), Positives = 35/44 (79%)
Frame = -3 / +1
Query: 233 LTQMLLGQYFWSMMMG*ETLSMVMPSYRNLLALSDDLESSYDLM 102
L QMLLGQYFWSM MG*ETLS+ SY +ALS DLESSYDL+
Sbjct: 400 LAQMLLGQYFWSMTMG*ETLSIFTSSYTKRVALSADLESSYDLI 531
Score = 39.1 bits (79), Expect(2) = 6e-024
Identities = 16/24 (66%), Positives = 18/24 (75%)
Frame = -1 / +2
Query: 175 CPW*CPRTGTCWP*ATTWSPRTT* 104
CP+ RT + WP*A TWSPRTT*
Sbjct: 458 CPFSRRRTRSGWP*APTWSPRTT* 529
Score = 36.8 bits (74), Expect(2) = 2e-022
Identities = 19/37 (51%), Positives = 20/37 (54%)
Frame = +3 / -1
Query: 105 QVVRGLQVVAQGQQVPVRXXXXXXXXXXXXXRPEVLP 215
QVVRGLQV AQG + VR RPEVLP
Sbjct: 528 QVVRGLQVGAQGHPLRVRRRENGQRLLPHRHRPEVLP 418
>gb|BJ245473.1|BJ245473 BJ245473 Y. Ogihara unpublished cDNA library, Wh_f Triticum
aestivum cDNA clone whf19m10 5', mRNA sequence
Length = 553
Score = 141 bits (302), Expect(2) = 3e-053
Identities = 55/76 (72%), Positives = 66/76 (86%)
Frame = +1 / +2
Query: 238 GASKVAVNDVVFKNIHGTSNTPEAITLNCANNLPCQGVQLVNVDIKYNGSGNKTMAVCKN 417
GASKV V D+VFKNI GTS TPEA+TLNC NN+PCQG+QLVNV++KY G+ NKTMAVCKN
Sbjct: 134 GASKVVVADIVFKNIVGTSATPEAVTLNCVNNVPCQGLQLVNVNLKYTGTNNKTMAVCKN 313
Query: 418 AIGKSIGLAKELACI* 465
A+G S+ + KELAC+*
Sbjct: 314 AVGTSVNVVKELACL* 361
Score = 116 bits (249), Expect(2) = 1e-040
Identities = 54/83 (65%), Positives = 57/83 (68%)
Frame = -3 / -2
Query: 464 QMHASSFAKPMDLPMAFLQTAMVLLPDPLYLMSTLTSCTPWHGRLLAQLSVMASGVLEVP 285
Q HASS D+P AFLQTAMVLL P+YL TLTSC PW G LL QLSV ASGV EVP
Sbjct: 360 QRHASSLTTLTDVPTAFLQTAMVLLFVPVYLRLTLTSCRPWQGTLLTQLSVTASGVAEVP 181
Query: 284 WMFLKTTSLTATLEAPDLTQMLL 216
MFLKT S T TLEAP +L
Sbjct: 180 TMFLKTMSATTTLEAPGALAQML 112
Score = 92.3 bits (195), Expect(2) = 4e-023
Identities = 44/65 (67%), Positives = 48/65 (73%)
Frame = -2 / -1
Query: 465 SNARQLLCQADGLADGILADGHGLVAGSIVLDVDVDELHALAWQVVGAVERDGLRRVGGA 286
S A +LL DG ADG+LADGHGLV + VL+VDVDEL ALA VV AVERDGL R GG
Sbjct: 361 SEACELLDDVDGRADGVLADGHGLVVRAGVLEVDVDELQALAGHVVDAVERDGLGRGGGP 182
Query: 285 VDVLE 271
DVLE
Sbjct: 181 DDVLE 167
Score = 89.5 bits (189), Expect(2) = 1e-021
Identities = 40/70 (57%), Positives = 48/70 (68%)
Frame = +3 / +1
Query: 276 EHPRHLQHAGGHHAQLRQQPAMPGRAARQRRHQVQWIRQQDHGRLQECHRQVHRLGKGAG 455
EH R L+HA G HAQLRQQ A+PG AARQR+ QV QQDHGRLQE R V + +GA
Sbjct: 172 EHRRDLRHARGRHAQLRQQRALPGPAARQRQPQVHRHEQQDHGRLQERRRHVRQRRQGAR 351
Query: 456 VHLNQLTNMH 485
+ L + T+ H
Sbjct: 352 MPLTRTTHAH 381
Score = 88.6 bits (187), Expect(2) = 3e-053
Identities = 32/50 (64%), Positives = 42/50 (84%)
Frame = +1 / +2
Query: 109 SYEDSKSSLKASKFLYEGITMDNVSYPIIIDQKYCPNNICVKSGASKVAV 258
SYEDSKS+L+A++F+Y+ + MDNVSYPI+IDQKYCPNNIC K+ + V
Sbjct: 2 SYEDSKSALRATRFVYDDVKMDNVSYPIVIDQKYCPNNICAKAPGASKVV 151
Score = 70.7 bits (148), Expect(2) = 1e-040
Identities = 31/42 (73%), Positives = 33/42 (78%)
Frame = -3 / -2
Query: 233 LTQMLLGQYFWSMMMG*ETLSMVMPSYRNLLALSDDLESSYD 108
L QMLLGQYFWSM MG*ETLS+ SY +ALS DLESSYD
Sbjct: 126 LAQMLLGQYFWSMTMG*ETLSIFTSSYTKRVALSADLESSYD 1
Score = 36.3 bits (73), Expect(2) = 4e-023
Identities = 14/22 (63%), Positives = 16/22 (72%)
Frame = -1 / -3
Query: 175 CPW*CPRTGTCWP*ATTWSPRT 110
CP+ RT + WP*A TWSPRT
Sbjct: 68 CPFSRRRTRSGWP*APTWSPRT 3
Score = 34.5 bits (69), Expect(2) = 1e-021
Identities = 18/36 (50%), Positives = 19/36 (52%)
Frame = +3 / +1
Query: 108 VVRGLQVVAQGQQVPVRXXXXXXXXXXXXXRPEVLP 215
VVRGLQV AQG + VR RPEVLP
Sbjct: 1 VVRGLQVGAQGHPLRVRRRENGQRLLPHRHRPEVLP 108
>gb|BJ249864.1|BJ249864 BJ249864 Y. Ogihara unpublished cDNA library, Wh_f Triticum
aestivum cDNA clone whf14b21 3', mRNA sequence
Length = 619
Score = 147 bits (316), Expect(2) = 7e-053
Identities = 56/78 (71%), Positives = 67/78 (85%)
Frame = +1 / -2
Query: 25 RYKDEKDVEDVQVTGCTIAGTTNGLRIKSYEDSKSSLKASKFLYEGITMDNVSYPIIIDQ 204
RYKDEKDVED+QVT CTI G TNGLRIKSYEDSKS+L+A++F+Y+ + MDNVSYPI+IDQ
Sbjct: 618 RYKDEKDVEDIQVTNCTIKGATNGLRIKSYEDSKSALRATRFVYDDVRMDNVSYPIVIDQ 439
Query: 205 KYCPNNICVKSGASKVAV 258
KYCPNNIC K+ + V
Sbjct: 438 KYCPNNICAKAPGASKVV 385
Score = 85.8 bits (181), Expect(2) = 5e-030
Identities = 38/58 (65%), Positives = 43/58 (74%)
Frame = -3 / +2
Query: 233 LTQMLLGQYFWSMMMG*ETLSMVMPSYRNLLALSDDLESSYDLMRRPFVVPAIVHPVT 60
L QMLLGQYFWSM MG*ETLS++ SY +A S DLESSYDL+R P V P +V VT
Sbjct: 410 LAQMLLGQYFWSMTMG*ETLSILTSSYTKRVARSADLESSYDLIRSPLVAPLMVQLVT 583
Score = 80.8 bits (170), Expect(2) = 7e-053
Identities = 32/42 (76%), Positives = 36/42 (85%)
Frame = +1 / -2
Query: 238 GASKVAVNDVVFKNIHGTSNTPEAITLNCANNLPCQGVQLVN 363
GASKV V D+VFKNI GTS TPEA+TLNC NN+PCQG+QL N
Sbjct: 402 GASKVVVADIVFKNIVGTSATPEAVTLNCVNNVPCQGLQLGN 277
Score = 66.1 bits (138), Expect(2) = 5e-030
Identities = 30/49 (61%), Positives = 32/49 (65%)
Frame = -3 / +2
Query: 362 LTSCTPWHGRLLAQLSVMASGVLEVPWMFLKTTSLTATLEAPDLTQMLL 216
L S PW G LL QLSV ASGV +VP MFLKT S T TLEAP +L
Sbjct: 278 LPSWRPWQGTLLTQLSVTASGVADVPTMFLKTMSATTTLEAPGALAQML 424
>gb|CA741798.1|CA741798 wia1c.pk003.h2 wia1c Triticum aestivum cDNA clone wia1c.pk003.h2 5'
end, mRNA sequence
Length = 572
Score = 135 bits (289), Expect(2) = 1e-032
Identities = 52/72 (72%), Positives = 63/72 (87%)
Frame = +1 / +3
Query: 250 VAVNDVVFKNIHGTSNTPEAITLNCANNLPCQGVQLVNVDIKYNGSGNKTMAVCKNAIGK 429
V V D+VFKNI GTS TPEA+TLNC NN+PCQG+QLVNV++KY G+ NKTMAVCKNA+GK
Sbjct: 162 VVVADIVFKNIVGTSATPEAVTLNCVNNVPCQGLQLVNVNLKYTGTNNKTMAVCKNAVGK 341
Query: 430 SIGLAKELACI* 465
S+ + KELAC+*
Sbjct: 342 SVNVVKELACL* 377
Score = 105 bits (223), Expect(2) = 8e-023
Identities = 50/79 (63%), Positives = 54/79 (68%)
Frame = -3 / -2
Query: 479 VSQLVQMHASSFAKPMDLPMAFLQTAMVLLPDPLYLMSTLTSCTPWHGRLLAQLSVMASG 300
V L Q HASS DLP AFLQTAMVLL P+YL TLTS PW G LL QLSV ASG
Sbjct: 391 VRGLSQRHASSLTTLTDLPTAFLQTAMVLLLVPVYLRLTLTSWRPWQGTLLTQLSVTASG 212
Query: 299 VLEVPWMFLKTTSLTATLE 243
V +VP MFLKT S T T++
Sbjct: 211 VADVPTMFLKTMSATTTIK 155
Score = 25.4 bits (49), Expect(2) = 1e-032
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +1 / +3
Query: 202 QKYCPNNI 225
QKYCPNNI
Sbjct: 9 QKYCPNNI 32
Score = 22.6 bits (43), Expect(2) = 8e-023
Identities = 8/10 (80%), Positives = 9/10 (90%)
Frame = -3 / -2
Query: 233 LTQMLLGQYF 204
+ QMLLGQYF
Sbjct: 40 IDQMLLGQYF 11
>gb|BJ264150.1|BJ264150 BJ264150 Y. Ogihara unpublished cDNA library, Wh_h Triticum
aestivum cDNA clone whh12d18 3', mRNA sequence
Length = 686
Score = 126 bits (269), Expect(2) = 4e-032
Identities = 54/108 (50%), Positives = 69/108 (63%)
Frame = +1 / -3
Query: 1 GISVGSLGRYKDEKDVEDVQVTGCTIAGTTNGLRIKSYEDSKSSLKASKFLYEGITMDNV 180
G+SVGSLGRY E DV + VT T GT NG+RIK++E+S + A++ L+E + M +V
Sbjct: 597 GMSVGSLGRYVGEGDVTSIHVTDMTFQGTMNGVRIKTWENSPTKSFAARMLFENMVMKDV 418
Query: 181 SYPIIIDQKYCPNNICVKSGASKVAVNDVVFKNIHGTSNTPEAITLNC 324
PIIIDQKYCP C S V + D+ FKNI GTS P A+ L C
Sbjct: 417 QTPIIIDQKYCPYYNCEHRYVSGVTIEDIKFKNIKGTSTLPVAVLLRC 274
Score = 32.7 bits (65), Expect(2) = 4e-032
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = +1 / -3
Query: 334 LPCQGVQLVNVDIKYNG 384
+PC+GV L NVD+ YNG
Sbjct: 270 VPCRGVVLQNVDLSYNG 220
>gb|BJ266660.1|BJ266660 BJ266660 Y. Ogihara unpublished cDNA library, Wh_h Triticum
aestivum cDNA clone whh27l09 3', mRNA sequence
Length = 677
Score = 126 bits (269), Expect(2) = 4e-032
Identities = 54/108 (50%), Positives = 69/108 (63%)
Frame = +1 / -2
Query: 1 GISVGSLGRYKDEKDVEDVQVTGCTIAGTTNGLRIKSYEDSKSSLKASKFLYEGITMDNV 180
G+SVGSLGRY E DV + VT T GT NG+RIK++E+S + A++ L+E + M +V
Sbjct: 595 GMSVGSLGRYVGEGDVTSIHVTDMTFQGTMNGVRIKTWENSPTKSFAARMLFENMVMKDV 416
Query: 181 SYPIIIDQKYCPNNICVKSGASKVAVNDVVFKNIHGTSNTPEAITLNC 324
PIIIDQKYCP C S V + D+ FKNI GTS P A+ L C
Sbjct: 415 QTPIIIDQKYCPYYNCEHRYVSGVTIEDIKFKNIKGTSTLPVAVLLRC 272
Score = 32.7 bits (65), Expect(2) = 4e-032
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = +1 / -2
Query: 334 LPCQGVQLVNVDIKYNG 384
+PC+GV L NVD+ YNG
Sbjct: 268 VPCRGVVLQNVDLSYNG 218
>gb|BJ244077.1|BJ244077 BJ244077 Y. Ogihara unpublished cDNA library, Wh_f Triticum
aestivum cDNA clone whf14b21 5', mRNA sequence
Length = 642
Score = 135 bits (289), Expect = 6e-031
Identities = 53/67 (79%), Positives = 62/67 (92%)
Frame = +1 / +3
Query: 1 GISVGSLGRYKDEKDVEDVQVTGCTIAGTTNGLRIKSYEDSKSSLKASKFLYEGITMDNV 180
GISVGSLGRYKDEKDVED+QVT CTI G TNGLRIKSYEDSKS+L+A++F+Y+ + MDNV
Sbjct: 441 GISVGSLGRYKDEKDVEDIQVTNCTIKGATNGLRIKSYEDSKSALRATRFVYDDVRMDNV 620
Query: 181 SYPIIID 201
SYPI+ID
Sbjct: 621 SYPIVID 641
>gb|CD454470.1|CD454470 WHE2319_C03_F05ZT CS wheat pre-anthesis spike cDNA library Triticum
aestivum cDNA clone WHE2319_C03_F05, mRNA sequence
Length = 649
Score = 132 bits (283), Expect = 4e-030
Identities = 50/68 (73%), Positives = 61/68 (89%)
Frame = +1 / -2
Query: 262 DVVFKNIHGTSNTPEAITLNCANNLPCQGVQLVNVDIKYNGSGNKTMAVCKNAIGKSIGL 441
D+VFKNI GTS TPEA+TLNC NN+PCQG+QLVNV++KY G+ NKTMAVCKNA+GKS+ +
Sbjct: 405 DIVFKNIVGTSATPEAVTLNCVNNVPCQGLQLVNVNLKYTGTNNKTMAVCKNAVGKSVNV 226
Query: 442 AKELACI* 465
KELAC+*
Sbjct: 225 VKELACL* 202
>gb|BJ253848.1|BJ253848 BJ253848 Y. Ogihara unpublished cDNA library, Wh_f Triticum
aestivum cDNA clone whf3i08 3', mRNA sequence
Length = 583
Score = 90.9 bits (192), Expect(2) = 4e-029
Identities = 37/76 (48%), Positives = 50/76 (65%)
Frame = +1 / -2
Query: 232 KSGASKVAVNDVVFKNIHGTSNTPEAITLNCANNLPCQGVQLVNVDIKYNGSGNKTMAVC 411
K A +V V DV FKNI GTS+TPEA++L C+ PC+GV + +V I+Y+G NKTMAVC
Sbjct: 483 KGDADRVTVKDVSFKNITGTSSTPEAVSLLCSEKKPCEGVTMSDVKIEYSGKNNKTMAVC 304
Query: 412 KNAIGKSIGLAKELAC 459
+ + G+ K C
Sbjct: 303 SHVKVTATGVDKANTC 256
Score = 57.9 bits (120), Expect(2) = 4e-029
Identities = 20/34 (58%), Positives = 24/34 (70%)
Frame = +1 / -2
Query: 139 ASKFLYEGITMDNVSYPIIIDQKYCPNNICVKSG 240
ASK YE + M++ YPIIIDQKYCPN +C G
Sbjct: 579 ASKITYENVKMEDSGYPIIIDQKYCPNKLCTSKG 478
>gb|CD454818.1|CD454818 WHE3454_A04_B08ZT CS wheat pre-anthesis spike cDNA library Triticum
aestivum cDNA clone WHE3454_A04_B08, mRNA sequence
Length = 710
Score = 88.1 bits (186), Expect(2) = 6e-029
Identities = 36/76 (47%), Positives = 48/76 (63%)
Frame = +1 / -3
Query: 232 KSGASKVAVNDVVFKNIHGTSNTPEAITLNCANNLPCQGVQLVNVDIKYNGSGNKTMAVC 411
K A +V V DV FKNI GTS TPEA++L C+ PC+GV + +V I+Y+G NKTM VC
Sbjct: 603 KGDADRVTVKDVTFKNITGTSATPEAVSLLCSEKKPCEGVTMSDVKIEYSGKNNKTMTVC 424
Query: 412 KNAIGKSIGLAKELAC 459
+ + G+ K C
Sbjct: 423 THVKVTATGVDKANTC 376
Score = 60.2 bits (125), Expect(2) = 6e-029
Identities = 23/36 (63%), Positives = 25/36 (69%)
Frame = +1 / -3
Query: 133 LKASKFLYEGITMDNVSYPIIIDQKYCPNNICVKSG 240
L ASK YE I MD+ YPIIIDQKYCPN +C G
Sbjct: 705 LVASKIHYENIEMDDSGYPIIIDQKYCPNKLCTSKG 598
>gb|BJ266186.1|BJ266186 BJ266186 Y. Ogihara unpublished cDNA library, Wh_h Triticum
aestivum cDNA clone whh25d18 3', mRNA sequence
Length = 557
Score = 99.1 bits (210), Expect(3) = 5e-027
Identities = 42/88 (47%), Positives = 55/88 (62%)
Frame = +1 / -1
Query: 61 VTGCTIAGTTNGLRIKSYEDSKSSLKASKFLYEGITMDNVSYPIIIDQKYCPNNICVKSG 240
VT T GT NG+RIK++E+S + A++ L+E + M +V PIIIDQKYCP C
Sbjct: 410 VTDMTFQGTMNGVRIKTWENSPTKSFAARMLFENMVMKDVQTPIIIDQKYCPYYNCEHRY 231
Query: 241 ASKVAVNDVVFKNIHGTSNTPEAITLNC 324
S V + D+ FKNI GTS P A+ L C
Sbjct: 230 VSGVTIEDIKFKNIKGTSTLPVAVLLRC 147
Score = 32.7 bits (65), Expect(3) = 5e-027
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = +1 / -1
Query: 334 LPCQGVQLVNVDIKYNG 384
+PC+GV L NVD+ YNG
Sbjct: 143 VPCRGVVLQNVDLSYNG 93
Score = 27.6 bits (54), Expect(3) = 5e-027
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = +1 / -3
Query: 1 GISVGSLGRYKDEKDVEDV 57
G+SVGS GRY E DV +
Sbjct: 471 GMSVGSXGRYVGEGDVTSI 415
>gb|BJ249502.1|BJ249502 BJ249502 Y. Ogihara unpublished cDNA library, Wh_f Triticum
aestivum cDNA clone whf11d16 3', mRNA sequence
Length = 337
Score = 112 bits (239), Expect = 4e-024
Identities = 41/56 (73%), Positives = 51/56 (91%)
Frame = +1 / -2
Query: 298 TPEAITLNCANNLPCQGVQLVNVDIKYNGSGNKTMAVCKNAIGKSIGLAKELACI* 465
TPEA+TLNC NN+PCQG+QLVNV++KY G+ NKTMAVCKNA+GKS+ + KELAC+*
Sbjct: 336 TPEAVTLNCVNNVPCQGLQLVNVNLKYTGTNNKTMAVCKNAVGKSVNVVKELACL* 169
>gb|CD454595.1|CD454595 WHE2329_A04_A07ZT CS wheat pre-anthesis spike cDNA library Triticum
aestivum cDNA clone WHE2329_A04_A07, mRNA sequence
Length = 619
Score = 95.5 bits (202), Expect(2) = 2e-023
Identities = 40/84 (47%), Positives = 53/84 (63%)
Frame = +1 / -3
Query: 73 TIAGTTNGLRIKSYEDSKSSLKASKFLYEGITMDNVSYPIIIDQKYCPNNICVKSGASKV 252
T GT NG+RIK++E+S + A+ L+E + M +V PIIIDQKYCP C S V
Sbjct: 608 TFEGTMNGVRIKTWENSPTKSLAAHMLFENMIMKDVQNPIIIDQKYCPYYDCEHKHVSGV 429
Query: 253 AVNDVVFKNIHGTSNTPEAITLNC 324
+ D+ FKNI GTS+ P A+ L C
Sbjct: 428 ILKDITFKNIKGTSSMPVAVLLRC 357
Score = 34.1 bits (68), Expect(2) = 2e-023
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = +1 / -3
Query: 334 LPCQGVQLVNVDIKYNGSGNKT 399
+PCQGV L +VD+KY G G +
Sbjct: 353 VPCQGVVLQDVDLKYMGEGGSS 288
>gb|CD896287.1|CD896287 G174.102G03R011120 G174 Triticum aestivum cDNA clone G174102G03,
mRNA sequence
Length = 591
Score = 59.3 bits (123), Expect(3) = 3e-023
Identities = 23/75 (30%), Positives = 40/75 (53%)
Frame = +1 / -3
Query: 238 GASKVAVNDVVFKNIHGTSNTPEAITLNCANNLPCQGVQLVNVDIKYNGSGNKTMAVCKN 417
G S + + +V + N+ GTS TP A+ +C+ + PC G+ + NV + Y + C+N
Sbjct: 358 GGSGIKITNVSYTNVEGTSATPVAVRFDCSPSRPCTGITMRNVWLGYGERRRAAESFCRN 179
Query: 418 AIGKSIGLAKELACI 462
A G + G +C+
Sbjct: 178 AHGVAYGQVVPPSCL 134
Score = 51.0 bits (105), Expect(3) = 3e-023
Identities = 22/44 (50%), Positives = 30/44 (68%)
Frame = +1 / -1
Query: 4 ISVGSLGRYKDEKDVEDVQVTGCTIAGTTNGLRIKSYEDSKSSL 135
IS+GSLG ++ V ++ V T+AGTTNGLRIKS+ + S L
Sbjct: 591 ISIGSLGDTPEQVAVRNITVKAVTLAGTTNGLRIKSWAKANSGL 460
Score = 36.3 bits (73), Expect(3) = 3e-023
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = +1 / -1
Query: 154 YEGITMDNVSYPIIIDQKYCPNN 222
+ + M NV PII+DQ YCP N
Sbjct: 444 FSDVVMRNVRNPIIVDQNYCPGN 376
>gb|BJ255300.1|BJ255300 BJ255300 Y. Ogihara unpublished cDNA library, Wh_f Triticum
aestivum cDNA clone whf23c18 3', mRNA sequence
Length = 716
Score = 67.5 bits (141), Expect(3) = 4e-023
Identities = 30/84 (35%), Positives = 48/84 (57%)
Frame = +1 / -3
Query: 226 CVKSGASKVAVNDVVFKNIHGTSNTPEAITLNCANNLPCQGVQLVNVDIKYNGSGNKTMA 405
C + S V V++VVFKNI GT+ + +AI L+C++++ C + L N+++K G T +
Sbjct: 324 CNRGQGSAVEVSNVVFKNIRGTTVSKDAIKLSCSHSISCSDIVLENINLKMEGGKGDTES 145
Query: 406 VCKNAIGKSIGLAKELACI*TN*L 477
C+NA + G C N*L
Sbjct: 144 TCQNAKWQESGTVIPQPCQFQN*L 73
Score = 42.3 bits (86), Expect(3) = 4e-023
Identities = 18/50 (36%), Positives = 26/50 (52%)
Frame = +1 / -3
Query: 1 GISVGSLGRYKDEKDVEDVQVTGCTIAGTTNGLRIKSYEDSKSSLKASKF 150
GIS+GSLG +V + + + GTTNG RIK+++ K F
Sbjct: 546 GISIGSLGDDNSRAEVSGITIDSVQLYGTTNGARIKTWQGGSGYAKDITF 397
Score = 36.3 bits (73), Expect(3) = 4e-023
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = +1 / -3
Query: 139 ASKFLYEGITMDNVSYPIIIDQKYC 213
A ++ + MDNV PIIIDQ YC
Sbjct: 414 AKDITFQNMVMDNVQNPIIIDQNYC 340
Database: Triticum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 3:01 PM
Number of letters in database: 367,240,239
Number of sequences in database: 636,343
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 571,410,384
Number of Sequences: 636343
Number of extensions: 9066850
Number of successful extensions: 131078
Number of sequences better than 1.0e-020: 26
length of database: 122,413,413
effective HSP length: 53
effective length of database: 88,687,234
effective search space used: 15342891482
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)