TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3115184.2.1
(642 letters)
Database: Triticum_nucl_with_EST.fasta
636,343 sequences; 367,240,239 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BJ248931.1|BJ248931 BJ248931 Y. Ogihara unpublished cDNA... 173 5e-077
gb|BJ253558.1|BJ253558 BJ253558 Y. Ogihara unpublished cDNA... 170 7e-077
gb|BJ246629.1|BJ246629 BJ246629 Y. Ogihara unpublished cDNA... 162 1e-074
gb|BJ252567.1|BJ252567 BJ252567 Y. Ogihara unpublished cDNA... 149 1e-070
gb|BJ251356.1|BJ251356 BJ251356 Y. Ogihara unpublished cDNA... 135 3e-054
gb|BJ249864.1|BJ249864 BJ249864 Y. Ogihara unpublished cDNA... 149 3e-053
gb|BJ245473.1|BJ245473 BJ245473 Y. Ogihara unpublished cDNA... 135 5e-053
gb|BJ264150.1|BJ264150 BJ264150 Y. Ogihara unpublished cDNA... 130 1e-034
gb|BJ266660.1|BJ266660 BJ266660 Y. Ogihara unpublished cDNA... 130 1e-034
gb|BJ244077.1|BJ244077 BJ244077 Y. Ogihara unpublished cDNA... 143 2e-033
gb|CA741798.1|CA741798 wia1c.pk003.h2 wia1c Triticum aestiv... 129 5e-031
gb|CD454470.1|CD454470 WHE2319_C03_F05ZT CS wheat pre-anthe... 127 2e-028
gb|BJ266186.1|BJ266186 BJ266186 Y. Ogihara unpublished cDNA... 98 1e-027
gb|CD454818.1|CD454818 WHE3454_A04_B08ZT CS wheat pre-anthe... 85 2e-027
gb|BJ253848.1|BJ253848 BJ253848 Y. Ogihara unpublished cDNA... 86 3e-027
gb|CD896287.1|CD896287 G174.102G03R011120 G174 Triticum aes... 62 2e-025
gb|BJ255300.1|BJ255300 BJ255300 Y. Ogihara unpublished cDNA... 64 9e-025
gb|BJ249502.1|BJ249502 BJ249502 Y. Ogihara unpublished cDNA... 106 2e-022
gb|BE404485.1|BE404485 WHE0442_H04_O08ZS Wheat etiolated se... 67 5e-022
gb|CD454595.1|CD454595 WHE2329_A04_A07ZT CS wheat pre-anthe... 94 2e-021
>gb|BJ248931.1|BJ248931 BJ248931 Y. Ogihara unpublished cDNA library, Wh_f Triticum
aestivum cDNA clone whf8k17 5', mRNA sequence
Length = 556
Score = 173 bits (372), Expect(2) = 5e-077
Identities = 67/88 (76%), Positives = 77/88 (87%)
Frame = +3 / +3
Query: 3 GHGISVGSLGRYKDEKDVEDVKVTGCTLAGTTNGLRIKSYEDSKSSLKATKFLYQDVTMD 182
GHGISVGSLGRYKDEKDVED++VT CT+ G TNGLRIKSYEDSKS+L+AT+F+Y DV MD
Sbjct: 21 GHGISVGSLGRYKDEKDVEDIQVTNCTIKGATNGLRIKSYEDSKSALRATRFVYDDVKMD 200
Query: 183 NVSYPIIIDQKYCPNNICVKSGASKVAV 266
NVSYPI+IDQKYCPNNIC K+ + V
Sbjct: 201 NVSYPIVIDQKYCPNNICAKAPGASKVV 284
Score = 135 bits (290), Expect(2) = 5e-077
Identities = 52/76 (68%), Positives = 66/76 (86%)
Frame = +3 / +3
Query: 246 GASKVAVNDVVFKNIHGTSNTPEAITLNCANNLPCQGVQLINVDIKYNRSDNKTMSVCKN 425
GASKV V D+VFKNI GTS TPEA+TLNC NN+PCQG+QL+NV++KY ++NKTM+VCKN
Sbjct: 267 GASKVVVADIVFKNIVGTSATPEAVTLNCVNNVPCQGLQLVNVNLKYTGTNNKTMAVCKN 446
Query: 426 AIGKSIGMAKELACV* 473
A+G S+ + KELAC+*
Sbjct: 447 AVGTSVNVVKELACL* 494
Score = 123 bits (263), Expect(3) = 4e-045
Identities = 55/80 (68%), Positives = 57/80 (71%)
Frame = -3 / -1
Query: 241 LTQMLLGQYFWSMMMG*ETLSMVTSWYRNLVALSDDLESSYDLMRRPLVVPASVHPVXXX 62
L QMLLGQYFWSM MG*ETLS+ TS Y VALS DLESSYDL+R PLV P V V
Sbjct: 259 LAQMLLGQYFWSMTMG*ETLSIFTSSYTKRVALSADLESSYDLIRSPLVAPLMVQLVTWM 80
Query: 61 XXXXXXSLYRPRLPTLMPWP 2
SLYRPRLPTLMPWP
Sbjct: 79 SSTSFSSLYRPRLPTLMPWP 20
Score = 71.6 bits (150), Expect(3) = 4e-045
Identities = 31/46 (67%), Positives = 32/46 (69%)
Frame = -3 / -1
Query: 361 CTPWQGRLLAQLSVMASGVLEVPWMFLKTTSLTATLEAPDLTQMLL 224
C PWQG LL QLSV ASGV EVP MFLKT S T TLEAP +L
Sbjct: 382 CRPWQGTLLTQLSVTASGVAEVPTMFLKTMSATTTLEAPGALAQML 245
Score = 58.8 bits (122), Expect(4) = 2e-023
Identities = 24/33 (72%), Positives = 26/33 (78%)
Frame = +2 / +2
Query: 125 GLQVVAQGHQVPVPGRHHGQRLLPHHHRPEVLP 223
GLQV AQGH + V R +GQRLLPH HRPEVLP
Sbjct: 143 GLQVGAQGHPLRVRRRENGQRLLPHRHRPEVLP 241
Score = 47.3 bits (97), Expect(4) = 2e-023
Identities = 20/27 (74%), Positives = 21/27 (77%)
Frame = +2 / +2
Query: 284 EHPRHLQHAGGHHAQLRQQPALPGRAA 364
EH R L+HA G HAQLRQQ ALPG AA
Sbjct: 305 EHRRDLRHARGRHAQLRQQRALPGPAA 385
Score = 32.2 bits (64), Expect(4) = 2e-023
Identities = 12/13 (92%), Positives = 12/13 (92%)
Frame = +2 / +2
Query: 2 RPRHQRRQPGAVQ 40
RPRHQR QPGAVQ
Sbjct: 20 RPRHQRGQPGAVQ 58
Score = 25.8 bits (50), Expect(4) = 2e-023
Identities = 12/19 (63%), Positives = 13/19 (68%)
Frame = +1 / +1
Query: 418 ARTPSASPLAWRRSSPASE 474
ARTPSA P RSS AS+
Sbjct: 439 ARTPSARPSTSSRSSHASD 495
Score = 25.8 bits (50), Expect(3) = 4e-045
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = -2 / -3
Query: 473 SDAGELLRHANGLADGVLA 417
S+A ELL +G ADGVLA
Sbjct: 494 SEACELLDDVDGRADGVLA 438
>gb|BJ253558.1|BJ253558 BJ253558 Y. Ogihara unpublished cDNA library, Wh_f Triticum
aestivum cDNA clone whf2g18 3', mRNA sequence
Length = 634
Score = 170 bits (365), Expect(2) = 7e-077
Identities = 66/88 (75%), Positives = 76/88 (86%)
Frame = +3 / -2
Query: 3 GHGISVGSLGRYKDEKDVEDVKVTGCTLAGTTNGLRIKSYEDSKSSLKATKFLYQDVTMD 182
GHGISVGSLGRYKDEK VED++VT CT+ G TNGLRIKSYEDSKS+L+AT+F+Y DV MD
Sbjct: 588 GHGISVGSLGRYKDEKXVEDIQVTNCTIKGATNGLRIKSYEDSKSALRATRFVYDDVRMD 409
Query: 183 NVSYPIIIDQKYCPNNICVKSGASKVAV 266
NVSYPI+IDQKYCPNNIC K+ + V
Sbjct: 408 NVSYPIVIDQKYCPNNICAKAPGASKVV 325
Score = 138 bits (296), Expect(2) = 7e-077
Identities = 53/76 (69%), Positives = 67/76 (88%)
Frame = +3 / -2
Query: 246 GASKVAVNDVVFKNIHGTSNTPEAITLNCANNLPCQGVQLINVDIKYNRSDNKTMSVCKN 425
GASKV V D+VFKNI GTS TPEA+TLNC NN+PCQG+QL+NV++KY ++NKTM+VCKN
Sbjct: 342 GASKVVVADIVFKNIVGTSATPEAVTLNCVNNVPCQGLQLVNVNLKYTGTNNKTMAVCKN 163
Query: 426 AIGKSIGMAKELACV* 473
A+GKS+ + KELAC+*
Sbjct: 162 AVGKSVNVVKELACL* 115
Score = 119 bits (254), Expect(3) = 3e-043
Identities = 54/80 (67%), Positives = 58/80 (72%)
Frame = -3 / +2
Query: 241 LTQMLLGQYFWSMMMG*ETLSMVTSWYRNLVALSDDLESSYDLMRRPLVVPASVHPVXXX 62
L QMLLGQYFWSM MG*ETLS++TS Y VA S DLESSYDL+R PLV P V V
Sbjct: 350 LAQMLLGQYFWSMTMG*ETLSILTSSYTKRVARSADLESSYDLIRSPLVAPLMVQLVTWM 529
Query: 61 XXXXXXSLYRPRLPTLMPWP 2
SLYRPRLPTL+PWP
Sbjct: 530 SSTXFSSLYRPRLPTLIPWP 589
Score = 66.6 bits (139), Expect(3) = 3e-043
Identities = 29/44 (65%), Positives = 31/44 (70%)
Frame = -3 / +2
Query: 355 PWQGRLLAQLSVMASGVLEVPWMFLKTTSLTATLEAPDLTQMLL 224
PWQG LL QLSV ASGV +VP MFLKT S T TLEAP +L
Sbjct: 233 PWQGTLLTQLSVTASGVADVPTMFLKTMSATTTLEAPGALAQML 364
Score = 28.6 bits (56), Expect(3) = 3e-043
Identities = 13/19 (68%), Positives = 15/19 (78%)
Frame = -2 / +1
Query: 473 SDAGELLRHANGLADGVLA 417
S+A ELL +GLADGVLA
Sbjct: 115 SEACELLDDVDGLADGVLA 171
>gb|BJ246629.1|BJ246629 BJ246629 Y. Ogihara unpublished cDNA library, Wh_f Triticum
aestivum cDNA clone whf24o17 5', mRNA sequence
Length = 656
Score = 162 bits (348), Expect(2) = 1e-074
Identities = 63/84 (75%), Positives = 73/84 (86%)
Frame = +3 / +1
Query: 15 SVGSLGRYKDEKDVEDVKVTGCTLAGTTNGLRIKSYEDSKSSLKATKFLYQDVTMDNVSY 194
SVGSLGRYKDEKDVED++VT CT+ G TNGLRIKSYEDSKS+L+AT+F+Y DV MDNVSY
Sbjct: 1 SVGSLGRYKDEKDVEDIQVTNCTIKGATNGLRIKSYEDSKSALRATRFVYDDVRMDNVSY 180
Query: 195 PIIIDQKYCPNNICVKSGASKVAV 266
PI+IDQKYCPNNIC K+ + V
Sbjct: 181 PIVIDQKYCPNNICAKAPGASKVV 252
Score = 138 bits (296), Expect(2) = 1e-074
Identities = 53/76 (69%), Positives = 67/76 (88%)
Frame = +3 / +1
Query: 246 GASKVAVNDVVFKNIHGTSNTPEAITLNCANNLPCQGVQLINVDIKYNRSDNKTMSVCKN 425
GASKV V D+VFKNI GTS TPEA+TLNC NN+PCQG+QL+NV++KY ++NKTM+VCKN
Sbjct: 235 GASKVVVADIVFKNIVGTSATPEAVTLNCVNNVPCQGLQLVNVNLKYTGTNNKTMAVCKN 414
Query: 426 AIGKSIGMAKELACV* 473
A+GKS+ + KELAC+*
Sbjct: 415 AVGKSVNVVKELACL* 462
Score = 105 bits (225), Expect(3) = 2e-039
Identities = 49/75 (65%), Positives = 52/75 (69%)
Frame = -3 / -1
Query: 241 LTQMLLGQYFWSMMMG*ETLSMVTSWYRNLVALSDDLESSYDLMRRPLVVPASVHPVXXX 62
L QMLLGQYFWSM MG*ETLS++TS Y VA S DLESSYDL+R PLV P V V
Sbjct: 227 LAQMLLGQYFWSMTMG*ETLSILTSSYTKRVARSADLESSYDLIRSPLVAPLMVQLVTWM 48
Query: 61 XXXXXXSLYRPRLPT 17
SLYRPRLPT
Sbjct: 47 SSTSFSSLYRPRLPT 3
Score = 66.6 bits (139), Expect(3) = 2e-039
Identities = 29/44 (65%), Positives = 31/44 (70%)
Frame = -3 / -1
Query: 355 PWQGRLLAQLSVMASGVLEVPWMFLKTTSLTATLEAPDLTQMLL 224
PWQG LL QLSV ASGV +VP MFLKT S T TLEAP +L
Sbjct: 344 PWQGTLLTQLSVTASGVADVPTMFLKTMSATTTLEAPGALAQML 213
Score = 28.6 bits (56), Expect(3) = 2e-039
Identities = 13/19 (68%), Positives = 15/19 (78%)
Frame = -2 / -3
Query: 473 SDAGELLRHANGLADGVLA 417
S+A ELL +GLADGVLA
Sbjct: 462 SEACELLDDVDGLADGVLA 406
>gb|BJ252567.1|BJ252567 BJ252567 Y. Ogihara unpublished cDNA library, Wh_f Triticum
aestivum cDNA clone whf24o17 3', mRNA sequence
Length = 612
Score = 149 bits (320), Expect(2) = 1e-070
Identities = 57/78 (73%), Positives = 67/78 (85%)
Frame = +3 / -2
Query: 33 RYKDEKDVEDVKVTGCTLAGTTNGLRIKSYEDSKSSLKATKFLYQDVTMDNVSYPIIIDQ 212
RYKDEKDVED++VT CT+ G TNGLRIKSYEDSKS+L+AT+F+Y DV MDNVSYPI+IDQ
Sbjct: 611 RYKDEKDVEDIQVTNCTIKGATNGLRIKSYEDSKSALRATRFVYDDVRMDNVSYPIVIDQ 432
Query: 213 KYCPNNICVKSGASKVAV 266
KYCPNNIC K+ + V
Sbjct: 431 KYCPNNICAKAPGASKVV 378
Score = 138 bits (296), Expect(2) = 1e-070
Identities = 53/76 (69%), Positives = 67/76 (88%)
Frame = +3 / -2
Query: 246 GASKVAVNDVVFKNIHGTSNTPEAITLNCANNLPCQGVQLINVDIKYNRSDNKTMSVCKN 425
GASKV V D+VFKNI GTS TPEA+TLNC NN+PCQG+QL+NV++KY ++NKTM+VCKN
Sbjct: 395 GASKVVVADIVFKNIVGTSATPEAVTLNCVNNVPCQGLQLVNVNLKYTGTNNKTMAVCKN 216
Query: 426 AIGKSIGMAKELACV* 473
A+GKS+ + KELAC+*
Sbjct: 215 AVGKSVNVVKELACL* 168
Score = 93.2 bits (197), Expect(3) = 2e-035
Identities = 44/70 (62%), Positives = 47/70 (67%)
Frame = -3 / +1
Query: 241 LTQMLLGQYFWSMMMG*ETLSMVTSWYRNLVALSDDLESSYDLMRRPLVVPASVHPVXXX 62
L QMLLGQYFWSM MG*ETLS++TS Y VA S DLESSYDL+R PLV P V V
Sbjct: 403 LAQMLLGQYFWSMTMG*ETLSILTSSYTKRVARSADLESSYDLIRSPLVAPLMVQLVTWM 582
Query: 61 XXXXXXSLYR 32
SLYR
Sbjct: 583 SSTSFSSLYR 612
Score = 66.6 bits (139), Expect(3) = 2e-035
Identities = 29/44 (65%), Positives = 31/44 (70%)
Frame = -3 / +1
Query: 355 PWQGRLLAQLSVMASGVLEVPWMFLKTTSLTATLEAPDLTQMLL 224
PWQG LL QLSV ASGV +VP MFLKT S T TLEAP +L
Sbjct: 286 PWQGTLLTQLSVTASGVADVPTMFLKTMSATTTLEAPGALAQML 417
Score = 28.6 bits (56), Expect(3) = 2e-035
Identities = 13/19 (68%), Positives = 15/19 (78%)
Frame = -2 / +3
Query: 473 SDAGELLRHANGLADGVLA 417
S+A ELL +GLADGVLA
Sbjct: 168 SEACELLDDVDGLADGVLA 224
>gb|BJ251356.1|BJ251356 BJ251356 Y. Ogihara unpublished cDNA library, Wh_f Triticum
aestivum cDNA clone whf19m10 3', mRNA sequence
Length = 531
Score = 135 bits (290), Expect(2) = 3e-054
Identities = 52/76 (68%), Positives = 66/76 (86%)
Frame = +3 / -2
Query: 246 GASKVAVNDVVFKNIHGTSNTPEAITLNCANNLPCQGVQLINVDIKYNRSDNKTMSVCKN 425
GASKV V D+VFKNI GTS TPEA+TLNC NN+PCQG+QL+NV++KY ++NKTM+VCKN
Sbjct: 392 GASKVVVADIVFKNIVGTSATPEAVTLNCVNNVPCQGLQLVNVNLKYTGTNNKTMAVCKN 213
Query: 426 AIGKSIGMAKELACV* 473
A+G S+ + KELAC+*
Sbjct: 212 AVGTSVNVVKELACL* 165
Score = 97.3 bits (206), Expect(2) = 3e-054
Identities = 37/52 (71%), Positives = 44/52 (84%)
Frame = +3 / -2
Query: 111 IKSYEDSKSSLKATKFLYQDVTMDNVSYPIIIDQKYCPNNICVKSGASKVAV 266
IKSYEDSKS+L+AT+F+Y DV MDNVSYPI+IDQKYCPNNIC K+ + V
Sbjct: 530 IKSYEDSKSALRATRFVYDDVKMDNVSYPIVIDQKYCPNNICAKAPGASKVV 375
Score = 76.2 bits (160), Expect(3) = 3e-031
Identities = 34/44 (77%), Positives = 36/44 (81%)
Frame = -3 / +1
Query: 241 LTQMLLGQYFWSMMMG*ETLSMVTSWYRNLVALSDDLESSYDLM 110
L QMLLGQYFWSM MG*ETLS+ TS Y VALS DLESSYDL+
Sbjct: 400 LAQMLLGQYFWSMTMG*ETLSIFTSSYTKRVALSADLESSYDLI 531
Score = 71.6 bits (150), Expect(3) = 3e-031
Identities = 31/46 (67%), Positives = 32/46 (69%)
Frame = -3 / +1
Query: 361 CTPWQGRLLAQLSVMASGVLEVPWMFLKTTSLTATLEAPDLTQMLL 224
C PWQG LL QLSV ASGV EVP MFLKT S T TLEAP +L
Sbjct: 277 CRPWQGTLLTQLSVTASGVAEVPTMFLKTMSATTTLEAPGALAQML 414
Score = 25.8 bits (50), Expect(3) = 3e-031
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = -2 / +3
Query: 473 SDAGELLRHANGLADGVLA 417
S+A ELL +G ADGVLA
Sbjct: 165 SEACELLDDVDGRADGVLA 221
>gb|BJ249864.1|BJ249864 BJ249864 Y. Ogihara unpublished cDNA library, Wh_f Triticum
aestivum cDNA clone whf14b21 3', mRNA sequence
Length = 619
Score = 149 bits (320), Expect(2) = 3e-053
Identities = 57/78 (73%), Positives = 67/78 (85%)
Frame = +3 / -2
Query: 33 RYKDEKDVEDVKVTGCTLAGTTNGLRIKSYEDSKSSLKATKFLYQDVTMDNVSYPIIIDQ 212
RYKDEKDVED++VT CT+ G TNGLRIKSYEDSKS+L+AT+F+Y DV MDNVSYPI+IDQ
Sbjct: 618 RYKDEKDVEDIQVTNCTIKGATNGLRIKSYEDSKSALRATRFVYDDVRMDNVSYPIVIDQ 439
Query: 213 KYCPNNICVKSGASKVAV 266
KYCPNNIC K+ + V
Sbjct: 438 KYCPNNICAKAPGASKVV 385
Score = 93.2 bits (197), Expect(2) = 2e-032
Identities = 44/70 (62%), Positives = 47/70 (67%)
Frame = -3 / +2
Query: 241 LTQMLLGQYFWSMMMG*ETLSMVTSWYRNLVALSDDLESSYDLMRRPLVVPASVHPVXXX 62
L QMLLGQYFWSM MG*ETLS++TS Y VA S DLESSYDL+R PLV P V V
Sbjct: 410 LAQMLLGQYFWSMTMG*ETLSILTSSYTKRVARSADLESSYDLIRSPLVAPLMVQLVTWM 589
Query: 61 XXXXXXSLYR 32
SLYR
Sbjct: 590 SSTSFSSLYR 619
Score = 80.3 bits (169), Expect(2) = 3e-053
Identities = 32/42 (76%), Positives = 36/42 (85%)
Frame = +3 / -2
Query: 246 GASKVAVNDVVFKNIHGTSNTPEAITLNCANNLPCQGVQLIN 371
GASKV V D+VFKNI GTS TPEA+TLNC NN+PCQG+QL N
Sbjct: 402 GASKVVVADIVFKNIVGTSATPEAVTLNCVNNVPCQGLQLGN 277
Score = 66.6 bits (139), Expect(2) = 2e-032
Identities = 29/44 (65%), Positives = 31/44 (70%)
Frame = -3 / +2
Query: 355 PWQGRLLAQLSVMASGVLEVPWMFLKTTSLTATLEAPDLTQMLL 224
PWQG LL QLSV ASGV +VP MFLKT S T TLEAP +L
Sbjct: 293 PWQGTLLTQLSVTASGVADVPTMFLKTMSATTTLEAPGALAQML 424
>gb|BJ245473.1|BJ245473 BJ245473 Y. Ogihara unpublished cDNA library, Wh_f Triticum
aestivum cDNA clone whf19m10 5', mRNA sequence
Length = 553
Score = 135 bits (290), Expect(2) = 5e-053
Identities = 52/76 (68%), Positives = 66/76 (86%)
Frame = +3 / +2
Query: 246 GASKVAVNDVVFKNIHGTSNTPEAITLNCANNLPCQGVQLINVDIKYNRSDNKTMSVCKN 425
GASKV V D+VFKNI GTS TPEA+TLNC NN+PCQG+QL+NV++KY ++NKTM+VCKN
Sbjct: 134 GASKVVVADIVFKNIVGTSATPEAVTLNCVNNVPCQGLQLVNVNLKYTGTNNKTMAVCKN 313
Query: 426 AIGKSIGMAKELACV* 473
A+G S+ + KELAC+*
Sbjct: 314 AVGTSVNVVKELACL* 361
Score = 93.2 bits (197), Expect(2) = 5e-053
Identities = 35/50 (70%), Positives = 42/50 (84%)
Frame = +3 / +2
Query: 117 SYEDSKSSLKATKFLYQDVTMDNVSYPIIIDQKYCPNNICVKSGASKVAV 266
SYEDSKS+L+AT+F+Y DV MDNVSYPI+IDQKYCPNNIC K+ + V
Sbjct: 2 SYEDSKSALRATRFVYDDVKMDNVSYPIVIDQKYCPNNICAKAPGASKVV 151
Score = 73.9 bits (155), Expect(3) = 2e-030
Identities = 33/42 (78%), Positives = 34/42 (80%)
Frame = -3 / -2
Query: 241 LTQMLLGQYFWSMMMG*ETLSMVTSWYRNLVALSDDLESSYD 116
L QMLLGQYFWSM MG*ETLS+ TS Y VALS DLESSYD
Sbjct: 126 LAQMLLGQYFWSMTMG*ETLSIFTSSYTKRVALSADLESSYD 1
Score = 71.6 bits (150), Expect(3) = 2e-030
Identities = 31/46 (67%), Positives = 32/46 (69%)
Frame = -3 / -2
Query: 361 CTPWQGRLLAQLSVMASGVLEVPWMFLKTTSLTATLEAPDLTQMLL 224
C PWQG LL QLSV ASGV EVP MFLKT S T TLEAP +L
Sbjct: 249 CRPWQGTLLTQLSVTASGVAEVPTMFLKTMSATTTLEAPGALAQML 112
Score = 25.8 bits (50), Expect(3) = 2e-030
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = -2 / -1
Query: 473 SDAGELLRHANGLADGVLA 417
S+A ELL +G ADGVLA
Sbjct: 361 SEACELLDDVDGRADGVLA 305
>gb|BJ264150.1|BJ264150 BJ264150 Y. Ogihara unpublished cDNA library, Wh_h Triticum
aestivum cDNA clone whh12d18 3', mRNA sequence
Length = 686
Score = 130 bits (279), Expect(3) = 1e-034
Identities = 55/110 (50%), Positives = 71/110 (64%)
Frame = +3 / -3
Query: 3 GHGISVGSLGRYKDEKDVEDVKVTGCTLAGTTNGLRIKSYEDSKSSLKATKFLYQDVTMD 182
GHG+SVGSLGRY E DV + VT T GT NG+RIK++E+S + A + L++++ M
Sbjct: 603 GHGMSVGSLGRYVGEGDVTSIHVTDMTFQGTMNGVRIKTWENSPTKSFAARMLFENMVMK 424
Query: 183 NVSYPIIIDQKYCPNNICVKSGASKVAVNDVVFKNIHGTSNTPEAITLNC 332
+V PIIIDQKYCP C S V + D+ FKNI GTS P A+ L C
Sbjct: 423 DVQTPIIIDQKYCPYYNCEHRYVSGVTIEDIKFKNIKGTSTLPVAVLLRC 274
Score = 29.5 bits (58), Expect(3) = 1e-034
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = +3 / -3
Query: 342 LPCQGVQLINVDIKYN 389
+PC+GV L NVD+ YN
Sbjct: 270 VPCRGVVLQNVDLSYN 223
Score = 25.4 bits (49), Expect(3) = 1e-034
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = +3 / -3
Query: 405 TMSVCKNAIGKSIGMAKELACV*TY 479
T+S C+NA +G C+*TY
Sbjct: 210 TLSHCENANATYVGYQHPQPCI*TY 136
>gb|BJ266660.1|BJ266660 BJ266660 Y. Ogihara unpublished cDNA library, Wh_h Triticum
aestivum cDNA clone whh27l09 3', mRNA sequence
Length = 677
Score = 130 bits (279), Expect(3) = 1e-034
Identities = 55/110 (50%), Positives = 71/110 (64%)
Frame = +3 / -2
Query: 3 GHGISVGSLGRYKDEKDVEDVKVTGCTLAGTTNGLRIKSYEDSKSSLKATKFLYQDVTMD 182
GHG+SVGSLGRY E DV + VT T GT NG+RIK++E+S + A + L++++ M
Sbjct: 601 GHGMSVGSLGRYVGEGDVTSIHVTDMTFQGTMNGVRIKTWENSPTKSFAARMLFENMVMK 422
Query: 183 NVSYPIIIDQKYCPNNICVKSGASKVAVNDVVFKNIHGTSNTPEAITLNC 332
+V PIIIDQKYCP C S V + D+ FKNI GTS P A+ L C
Sbjct: 421 DVQTPIIIDQKYCPYYNCEHRYVSGVTIEDIKFKNIKGTSTLPVAVLLRC 272
Score = 29.5 bits (58), Expect(3) = 1e-034
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = +3 / -2
Query: 342 LPCQGVQLINVDIKYN 389
+PC+GV L NVD+ YN
Sbjct: 268 VPCRGVVLQNVDLSYN 221
Score = 25.4 bits (49), Expect(3) = 1e-034
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = +3 / -2
Query: 405 TMSVCKNAIGKSIGMAKELACV*TY 479
T+S C+NA +G C+*TY
Sbjct: 208 TLSHCENANATYVGYQHPQPCI*TY 134
>gb|BJ244077.1|BJ244077 BJ244077 Y. Ogihara unpublished cDNA library, Wh_f Triticum
aestivum cDNA clone whf14b21 5', mRNA sequence
Length = 642
Score = 143 bits (307), Expect = 2e-033
Identities = 56/69 (81%), Positives = 64/69 (92%)
Frame = +3 / +3
Query: 3 GHGISVGSLGRYKDEKDVEDVKVTGCTLAGTTNGLRIKSYEDSKSSLKATKFLYQDVTMD 182
GHGISVGSLGRYKDEKDVED++VT CT+ G TNGLRIKSYEDSKS+L+AT+F+Y DV MD
Sbjct: 435 GHGISVGSLGRYKDEKDVEDIQVTNCTIKGATNGLRIKSYEDSKSALRATRFVYDDVRMD 614
Query: 183 NVSYPIIID 209
NVSYPI+ID
Sbjct: 615 NVSYPIVID 641
>gb|CA741798.1|CA741798 wia1c.pk003.h2 wia1c Triticum aestivum cDNA clone wia1c.pk003.h2 5'
end, mRNA sequence
Length = 572
Score = 129 bits (277), Expect(2) = 5e-031
Identities = 49/72 (68%), Positives = 63/72 (87%)
Frame = +3 / +3
Query: 258 VAVNDVVFKNIHGTSNTPEAITLNCANNLPCQGVQLINVDIKYNRSDNKTMSVCKNAIGK 437
V V D+VFKNI GTS TPEA+TLNC NN+PCQG+QL+NV++KY ++NKTM+VCKNA+GK
Sbjct: 162 VVVADIVFKNIVGTSATPEAVTLNCVNNVPCQGLQLVNVNLKYTGTNNKTMAVCKNAVGK 341
Query: 438 SIGMAKELACV* 473
S+ + KELAC+*
Sbjct: 342 SVNVVKELACL* 377
Score = 25.4 bits (49), Expect(2) = 5e-031
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +3 / +3
Query: 210 QKYCPNNI 233
QKYCPNNI
Sbjct: 9 QKYCPNNI 32
>gb|CD454470.1|CD454470 WHE2319_C03_F05ZT CS wheat pre-anthesis spike cDNA library Triticum
aestivum cDNA clone WHE2319_C03_F05, mRNA sequence
Length = 649
Score = 127 bits (271), Expect = 2e-028
Identities = 47/68 (69%), Positives = 61/68 (89%)
Frame = +3 / -2
Query: 270 DVVFKNIHGTSNTPEAITLNCANNLPCQGVQLINVDIKYNRSDNKTMSVCKNAIGKSIGM 449
D+VFKNI GTS TPEA+TLNC NN+PCQG+QL+NV++KY ++NKTM+VCKNA+GKS+ +
Sbjct: 405 DIVFKNIVGTSATPEAVTLNCVNNVPCQGLQLVNVNLKYTGTNNKTMAVCKNAVGKSVNV 226
Query: 450 AKELACV* 473
KELAC+*
Sbjct: 225 VKELACL* 202
>gb|BJ266186.1|BJ266186 BJ266186 Y. Ogihara unpublished cDNA library, Wh_h Triticum
aestivum cDNA clone whh25d18 3', mRNA sequence
Length = 557
Score = 97.7 bits (207), Expect(3) = 1e-027
Identities = 41/88 (46%), Positives = 55/88 (62%)
Frame = +3 / -1
Query: 69 VTGCTLAGTTNGLRIKSYEDSKSSLKATKFLYQDVTMDNVSYPIIIDQKYCPNNICVKSG 248
VT T GT NG+RIK++E+S + A + L++++ M +V PIIIDQKYCP C
Sbjct: 410 VTDMTFQGTMNGVRIKTWENSPTKSFAARMLFENMVMKDVQTPIIIDQKYCPYYNCEHRY 231
Query: 249 ASKVAVNDVVFKNIHGTSNTPEAITLNC 332
S V + D+ FKNI GTS P A+ L C
Sbjct: 230 VSGVTIEDIKFKNIKGTSTLPVAVLLRC 147
Score = 34.1 bits (68), Expect(3) = 1e-027
Identities = 13/21 (61%), Positives = 15/21 (71%)
Frame = +3 / -3
Query: 3 GHGISVGSLGRYKDEKDVEDV 65
GHG+SVGS GRY E DV +
Sbjct: 477 GHGMSVGSXGRYVGEGDVTSI 415
Score = 29.5 bits (58), Expect(3) = 1e-027
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = +3 / -1
Query: 342 LPCQGVQLINVDIKYN 389
+PC+GV L NVD+ YN
Sbjct: 143 VPCRGVVLQNVDLSYN 96
>gb|CD454818.1|CD454818 WHE3454_A04_B08ZT CS wheat pre-anthesis spike cDNA library Triticum
aestivum cDNA clone WHE3454_A04_B08, mRNA sequence
Length = 710
Score = 85.4 bits (180), Expect(2) = 2e-027
Identities = 35/76 (46%), Positives = 49/76 (64%)
Frame = +3 / -3
Query: 240 KSGASKVAVNDVVFKNIHGTSNTPEAITLNCANNLPCQGVQLINVDIKYNRSDNKTMSVC 419
K A +V V DV FKNI GTS TPEA++L C+ PC+GV + +V I+Y+ +NKTM+VC
Sbjct: 603 KGDADRVTVKDVTFKNITGTSATPEAVSLLCSEKKPCEGVTMSDVKIEYSGKNNKTMTVC 424
Query: 420 KNAIGKSIGMAKELAC 467
+ + G+ K C
Sbjct: 423 THVKVTATGVDKANTC 376
Score = 57.4 bits (119), Expect(2) = 2e-027
Identities = 20/36 (55%), Positives = 26/36 (72%)
Frame = +3 / -3
Query: 141 LKATKFLYQDVTMDNVSYPIIIDQKYCPNNICVKSG 248
L A+K Y+++ MD+ YPIIIDQKYCPN +C G
Sbjct: 705 LVASKIHYENIEMDDSGYPIIIDQKYCPNKLCTSKG 598
>gb|BJ253848.1|BJ253848 BJ253848 Y. Ogihara unpublished cDNA library, Wh_f Triticum
aestivum cDNA clone whf3i08 3', mRNA sequence
Length = 583
Score = 86.3 bits (182), Expect(2) = 3e-027
Identities = 35/76 (46%), Positives = 50/76 (65%)
Frame = +3 / -2
Query: 240 KSGASKVAVNDVVFKNIHGTSNTPEAITLNCANNLPCQGVQLINVDIKYNRSDNKTMSVC 419
K A +V V DV FKNI GTS+TPEA++L C+ PC+GV + +V I+Y+ +NKTM+VC
Sbjct: 483 KGDADRVTVKDVSFKNITGTSSTPEAVSLLCSEKKPCEGVTMSDVKIEYSGKNNKTMAVC 304
Query: 420 KNAIGKSIGMAKELAC 467
+ + G+ K C
Sbjct: 303 SHVKVTATGVDKANTC 256
Score = 56.1 bits (116), Expect(2) = 3e-027
Identities = 19/34 (55%), Positives = 25/34 (73%)
Frame = +3 / -2
Query: 147 ATKFLYQDVTMDNVSYPIIIDQKYCPNNICVKSG 248
A+K Y++V M++ YPIIIDQKYCPN +C G
Sbjct: 579 ASKITYENVKMEDSGYPIIIDQKYCPNKLCTSKG 478
>gb|CD896287.1|CD896287 G174.102G03R011120 G174 Triticum aestivum cDNA clone G174102G03,
mRNA sequence
Length = 591
Score = 62.0 bits (129), Expect(3) = 2e-025
Identities = 24/75 (32%), Positives = 40/75 (53%)
Frame = +3 / -3
Query: 246 GASKVAVNDVVFKNIHGTSNTPEAITLNCANNLPCQGVQLINVDIKYNRSDNKTMSVCKN 425
G S + + +V + N+ GTS TP A+ +C+ + PC G+ + NV + Y S C+N
Sbjct: 358 GGSGIKITNVSYTNVEGTSATPVAVRFDCSPSRPCTGITMRNVWLGYGERRRAAESFCRN 179
Query: 426 AIGKSIGMAKELACV 470
A G + G +C+
Sbjct: 178 AHGVAYGQVVPPSCL 134
Score = 51.9 bits (107), Expect(3) = 2e-025
Identities = 23/44 (52%), Positives = 30/44 (68%)
Frame = +3 / -1
Query: 12 ISVGSLGRYKDEKDVEDVKVTGCTLAGTTNGLRIKSYEDSKSSL 143
IS+GSLG ++ V ++ V TLAGTTNGLRIKS+ + S L
Sbjct: 591 ISIGSLGDTPEQVAVRNITVKAVTLAGTTNGLRIKSWAKANSGL 460
Score = 40.0 bits (81), Expect(3) = 2e-025
Identities = 14/23 (60%), Positives = 16/23 (69%)
Frame = +3 / -1
Query: 162 YQDVTMDNVSYPIIIDQKYCPNN 230
+ DV M NV PII+DQ YCP N
Sbjct: 444 FSDVVMRNVRNPIIVDQNYCPGN 376
>gb|BJ255300.1|BJ255300 BJ255300 Y. Ogihara unpublished cDNA library, Wh_f Triticum
aestivum cDNA clone whf23c18 3', mRNA sequence
Length = 716
Score = 63.8 bits (133), Expect(3) = 9e-025
Identities = 27/78 (34%), Positives = 44/78 (56%)
Frame = +3 / -3
Query: 234 CVKSGASKVAVNDVVFKNIHGTSNTPEAITLNCANNLPCQGVQLINVDIKYNRSDNKTMS 413
C + S V V++VVFKNI GT+ + +AI L+C++++ C + L N+++K T S
Sbjct: 324 CNRGQGSAVEVSNVVFKNIRGTTVSKDAIKLSCSHSISCSDIVLENINLKMEGGKGDTES 145
Query: 414 VCKNAIGKSIGMAKELAC 467
C+NA + G C
Sbjct: 144 TCQNAKWQESGTVIPQPC 91
Score = 50.1 bits (103), Expect(3) = 9e-025
Identities = 21/52 (40%), Positives = 28/52 (53%)
Frame = +3 / -3
Query: 3 GHGISVGSLGRYKDEKDVEDVKVTGCTLAGTTNGLRIKSYEDSKSSLKATKF 158
GHGIS+GSLG +V + + L GTTNG RIK+++ K F
Sbjct: 552 GHGISIGSLGDDNSRAEVSGITIDSVQLYGTTNGARIKTWQGGSGYAKDITF 397
Score = 37.7 bits (76), Expect(3) = 9e-025
Identities = 14/25 (56%), Positives = 17/25 (68%)
Frame = +3 / -3
Query: 147 ATKFLYQDVTMDNVSYPIIIDQKYC 221
A +Q++ MDNV PIIIDQ YC
Sbjct: 414 AKDITFQNMVMDNVQNPIIIDQNYC 340
>gb|BJ249502.1|BJ249502 BJ249502 Y. Ogihara unpublished cDNA library, Wh_f Triticum
aestivum cDNA clone whf11d16 3', mRNA sequence
Length = 337
Score = 106 bits (227), Expect = 2e-022
Identities = 38/56 (67%), Positives = 51/56 (91%)
Frame = +3 / -2
Query: 306 TPEAITLNCANNLPCQGVQLINVDIKYNRSDNKTMSVCKNAIGKSIGMAKELACV* 473
TPEA+TLNC NN+PCQG+QL+NV++KY ++NKTM+VCKNA+GKS+ + KELAC+*
Sbjct: 336 TPEAVTLNCVNNVPCQGLQLVNVNLKYTGTNNKTMAVCKNAVGKSVNVVKELACL* 169
>gb|BE404485.1|BE404485 WHE0442_H04_O08ZS Wheat etiolated seedling root cDNA library
Triticum aestivum cDNA clone WHE0442_H04_O08, mRNA
sequence
Length = 632
Score = 66.6 bits (139), Expect(2) = 5e-022
Identities = 28/73 (38%), Positives = 42/73 (57%)
Frame = +3 / +1
Query: 162 YQDVTMDNVSYPIIIDQKYCPNNICVKSGASKVAVNDVVFKNIHGTSNTPEAITLNCANN 341
++ + M NVS PIIIDQ YC + V V V F ++ GTS T +AI + C++
Sbjct: 412 FESIVMKNVSNPIIIDQYYCDQPTPCANQTKAVEVRKVEFVDVRGTSATAQAIKIACSDT 591
Query: 342 LPCQGVQLINVDI 380
PC ++L NV++
Sbjct: 592 APCTELELRNVNL 630
Score = 58.3 bits (121), Expect(2) = 5e-022
Identities = 23/41 (56%), Positives = 30/41 (73%)
Frame = +3 / +3
Query: 3 GHGISVGSLGRYKDEKDVEDVKVTGCTLAGTTNGLRIKSYE 125
GHGIS+GSLG+ + VE V+V C L TTNG+RIKS++
Sbjct: 258 GHGISIGSLGKNRTTDRVESVRVDTCLLTNTTNGVRIKSWQ 380
>gb|CD454595.1|CD454595 WHE2329_A04_A07ZT CS wheat pre-anthesis spike cDNA library Triticum
aestivum cDNA clone WHE2329_A04_A07, mRNA sequence
Length = 619
Score = 94.1 bits (199), Expect(2) = 2e-021
Identities = 39/84 (46%), Positives = 53/84 (63%)
Frame = +3 / -3
Query: 81 TLAGTTNGLRIKSYEDSKSSLKATKFLYQDVTMDNVSYPIIIDQKYCPNNICVKSGASKV 260
T GT NG+RIK++E+S + A L++++ M +V PIIIDQKYCP C S V
Sbjct: 608 TFEGTMNGVRIKTWENSPTKSLAAHMLFENMIMKDVQNPIIIDQKYCPYYDCEHKHVSGV 429
Query: 261 AVNDVVFKNIHGTSNTPEAITLNC 332
+ D+ FKNI GTS+ P A+ L C
Sbjct: 428 ILKDITFKNIKGTSSMPVAVLLRC 357
Score = 28.6 bits (56), Expect(2) = 2e-021
Identities = 10/15 (66%), Positives = 13/15 (86%)
Frame = +3 / -3
Query: 342 LPCQGVQLINVDIKY 386
+PCQGV L +VD+KY
Sbjct: 353 VPCQGVVLQDVDLKY 309
Database: Triticum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 3:01 PM
Number of letters in database: 367,240,239
Number of sequences in database: 636,343
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 388,947,062
Number of Sequences: 636343
Number of extensions: 4061327
Number of successful extensions: 79624
Number of sequences better than 1.0e-020: 27
length of database: 122,413,413
effective HSP length: 53
effective length of database: 88,687,234
effective search space used: 14189957440
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)