TBLASTX 2.2.10 [Oct-19-2004]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 3054736.2.1
         (725 letters)

Database: Triticum_nucl_with_EST.fasta 
           636,343 sequences; 367,240,239 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|CV066458.1|CV066458  WNEL4b5 Wheat EST endosperm library ...   164   1e-039
gb|BF473884.1|BF473884  WHE0932_D09_H18ZS Wheat 5-15 DAP spi...   160   2e-038

>gb|CV066458.1|CV066458 WNEL4b5 Wheat EST endosperm library Triticum aestivum cDNA clone
           WNEL4b5 5' similar to Oryza sativa, mRNA sequence
          Length = 546

 Score =  164 bits (352), Expect = 1e-039
 Identities = 64/117 (54%), Positives = 83/117 (70%)
 Frame = +3 / +2

                                                                       
Query: 3   VVNDPNLKWYESSWELLGNEYFMHASGSLYALSSEVVEALATAKSDSLRMFDYEDVTIGA 182
           V  DP LKWYE    LLG+EYF+HA G +YALS++VV +L   +++S RMF+ EDVTIG+
Sbjct: 29  VFTDPKLKWYEPQSFLLGSEYFLHAYGPIYALSADVVASLVALRNNSFRMFNNEDVTIGS 208

                                                                    
Query: 183 WMLAMNVKHEDNRAMCDSVCTPTSIAVWDSKKCSGTCNVADKIKQLHNTTVCSKSPT 353
           WMLAMNV HE+  A+C+  CT +SIAVWD  KCSG C+   K+ +LH    C+  PT
Sbjct: 209 WMLAMNVNHENTHALCEPECTASSIAVWDIPKCSGLCHPEVKMLELHQRKECTGGPT 379



>gb|BF473884.1|BF473884 WHE0932_D09_H18ZS Wheat 5-15 DAP spike cDNA library Triticum
           aestivum cDNA clone WHE0932_D09_H18, mRNA sequence
          Length = 651

 Score =  160 bits (343), Expect = 2e-038
 Identities = 63/117 (53%), Positives = 82/117 (70%)
 Frame = +3 / +3

                                                                       
Query: 3   VVNDPNLKWYESSWELLGNEYFMHASGSLYALSSEVVEALATAKSDSLRMFDYEDVTIGA 182
           V  DP LKWYE    LLG+EYF+HA G +YALS++VV +L   +++S RMF+ EDVTIG+
Sbjct: 72  VFTDPKLKWYEPQSFLLGSEYFLHAYGPIYALSADVVASLVAVRNNSFRMFNNEDVTIGS 251

                                                                    
Query: 183 WMLAMNVKHEDNRAMCDSVCTPTSIAVWDSKKCSGTCNVADKIKQLHNTTVCSKSPT 353
           WMLAMNV HE+  A+ +  CT +SIAVWD  KCSG C+   K+ +LH    C+  PT
Sbjct: 252 WMLAMNVNHENTHALTEPECTASSIAVWDIPKCSGLCHPEVKMLELHQRKECTGGPT 422



  Database: Triticum_nucl_with_EST.fasta
    Posted date:  Feb 7, 2006  3:01 PM
  Number of letters in database: 367,240,239
  Number of sequences in database:  636,343
  
Lambda     K      H
   0.318    0.134    0.401 


Matrix: BLOSUM62
Number of Hits to DB: 740,599,581
Number of Sequences: 636343
Number of extensions: 10616572
Number of successful extensions: 84002
Number of sequences better than 1.0e-020: 2
length of database: 122,413,413
effective HSP length: 53
effective length of database: 88,687,234
effective search space used: 16673199992
frameshift window, decay const: 40,  0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)