TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2950080.2.1
(687 letters)
Database: Triticum_nucl_with_EST.fasta
636,343 sequences; 367,240,239 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BQ246804.1|BQ246804 TaE15005C07R TaE15 Triticum aestivum... 356 2e-097
gb|CK216360.1|CK216360 FGAS028348 Triticum aestivum FGAS: L... 308 7e-084
gb|BQ244073.1|BQ244073 TaE15005C07F TaE15 Triticum aestivum... 291 7e-078
gb|CA609769.1|CA609769 wr1.pk0110.e1 wr1 Triticum aestivum ... 251 7e-066
gb|CA736833.1|CA736833 wpi1s.pk008.d3 wpi1s Triticum aestiv... 223 1e-057
gb|CA593339.1|CA593339 wpa1c.pk003.g18 wpa1c Triticum aesti... 186 9e-052
>gb|BQ246804.1|BQ246804 TaE15005C07R TaE15 Triticum aestivum cDNA clone TaE15005C07R, mRNA
sequence
Length = 660
Score = 356 bits (771), Expect = 2e-097
Identities = 141/168 (83%), Positives = 149/168 (88%)
Frame = +2 / +2
Query: 38 ARPNVLVXXXXXXXXXXXCSLLADAAGLRHVNIGDLVREKSLHDGWDADLECHVINEDLV 217
ARPNVLV CSLLADAAG+ HVNIGDLVREK LHDGWD DL+CHVINEDLV
Sbjct: 128 ARPNVLVTGTPGTGKTTTCSLLADAAGVAHVNIGDLVREKGLHDGWDEDLDCHVINEDLV 307
Query: 218 CDELEDMMEEGGILVDYHGCDFFPERWFDLVVVLQTDNSILHDRLTGRGYMGSKLANNIE 397
CDELED MEEGG+LVDYHGCDFFPERWFDLVVVLQTDNSILHDRLT RGYMG+KL NNIE
Sbjct: 308 CDELEDRMEEGGVLVDYHGCDFFPERWFDLVVVLQTDNSILHDRLTSRGYMGAKLTNNIE 487
Query: 398 CEIFQVLLEEARESYREDIVMPLRSDNVEDISRNVGALTDWVNNWRPS 541
CEIFQVLLEEARESY+EDIVMPLRSD+VEDISRNV LT+W+NNWRPS
Sbjct: 488 CEIFQVLLEEARESYKEDIVMPLRSDSVEDISRNVSTLTEWINNWRPS 631
Score = 203 bits (437), Expect(2) = 8e-068
Identities = 87/123 (70%), Positives = 102/123 (82%)
Frame = -3 / -3
Query: 550 TGLTRSPIVYPVCQCTYVPTNILHVVTSQWHHDVLSVALPRLLEEHLEDFALYVVGELGT 371
T L SP+VYP+ Q Y+P +IL V SQ HH +L VALPRLL+EHLED ALYVV ELGT
Sbjct: 640 TSL*WSPVVYPLRQRAYIPADILDAVASQRHHYILLVALPRLLQEHLEDLALYVVCELGT 461
Query: 370 HVTSARQAIMQN*VVSLEHNYEVKPTFWKEITSVVIY*YTTFFHHVLKLVAHQVLVDDMA 191
HV SA QAIMQN*VV L+H+++VKPTFWKEITSV+IY*YT FFH VLKL+ +QVLVDD+A
Sbjct: 460 HVASASQAIMQN*VVCLKHDHKVKPTFWKEITSVIIY*YTAFFHPVLKLITNQVLVDDVA 281
Query: 190 LEV 182
+EV
Sbjct: 280 VEV 272
Score = 157 bits (337), Expect = 1e-037
Identities = 78/113 (69%), Positives = 85/113 (75%)
Frame = +1 / +1
Query: 199 HQRGPGVRRA*GHDGRRWYTSRLPRM*FLSRTLV*PRSCAPD*QLNSA*SPDGQRLHGFQ 378
HQRGPG+ A*G DGRR TSRL RM*FLSRTLV*P A D QLNSA*S D QRLHG Q
Sbjct: 289 HQRGPGL**A*GQDGRRRCTSRLSRM*FLSRTLV*PCGRASDRQLNSA*SLD*QRLHGCQ 468
Query: 379 ARQQHRVRNLPSAPRGGEGELQRGHRDAIAK*QRGGY**ERRCIDRLGKQLET 537
A +QHRVR+LP AP GGEGELQ G+ DA AK QR GY E + +D + KQLET
Sbjct: 469 AHKQHRVRDLPGAPGGGEGELQGGYSDAAAKRQRRGYQQECKHVDGVDKQLET 627
Score = 122 bits (261), Expect = 4e-027
Identities = 58/79 (73%), Positives = 61/79 (77%)
Frame = -1 / -1
Query: 516 SVNAPTFLLISSTLSLRNGITMXXXXXXXXXXXSTWKISHSMLLASLEPM*PLPVRRSCR 337
SVN TFLLISSTLSLR+GIT+ STWKISHSML SL PM*PL V+RSCR
Sbjct: 606 SVNVLTFLLISSTLSLRSGITISSL*LSLASSRSTWKISHSMLFVSLAPM*PLLVKRSCR 427
Query: 336 IELSVWSTTTRSNQRSGKK 280
IELSV STTTRSNQRSGKK
Sbjct: 426 IELSV*STTTRSNQRSGKK 370
Score = 120 bits (257), Expect(3) = 7e-032
Identities = 49/65 (75%), Positives = 54/65 (83%)
Frame = -2 / -2
Query: 419 GALGRFRTLCCWRAWNPCNLCPSGDHAELSCQSGAQLRGQTNVLERNHIRGNLLVYHLLP 240
GA GR RTLCC AW+PC+LC S DHAELSC S A+ +GQTNVLERNHIR NLLV+ LLP
Sbjct: 509 GAPGRSRTLCCL*AWHPCSLC*SSDHAELSCLSEARPQGQTNVLERNHIRDNLLVHRLLP 330
Query: 239 SCPQA 225
SCPQA
Sbjct: 329 SCPQA 315
Score = 112 bits (239), Expect(2) = 1e-028
Identities = 53/92 (57%), Positives = 55/92 (59%)
Frame = +3 / +3
Query: 99 SLPTPQXXXXXXXXXXXXXXXXXXXXXPTSSAMSSTRTWCATSLRT*WKKVVY**ITTDV 278
S PTP+ TS+A SSTRTW SLRT WKK VY**I TDV
Sbjct: 189 SSPTPRAWRTSTSATWSARRASTTAGTRTSTATSSTRTWFVMSLRTGWKKAVY**IITDV 368
Query: 279 ISFQNVGLTS*LCSRLTTQFCMIA*RAEVTWV 374
ISFQNVGLT C R TTQFCMIA* AE TWV
Sbjct: 369 ISFQNVGLTLWSCFRQTTQFCMIA*LAEATWV 464
Score = 75.3 bits (158), Expect(2) = 8e-068
Identities = 37/56 (66%), Positives = 38/56 (67%)
Frame = -1 / -1
Query: 204 LMTWHSRSASQPS*RLFSRTRSPMLTWRRPAASARSEHXXXXXXXXXXVTSTFGRA 37
LMTW SRS+SQPS R FSRTRSPMLT PAASAR EH VTST GRA
Sbjct: 294 LMTWQSRSSSQPSWRPFSRTRSPMLTCATPAASARREHVVVFPVPGVPVTSTLGRA 127
Score = 35.0 bits (70), Expect(2) = 1e-028
Identities = 17/32 (53%), Positives = 19/32 (59%)
Frame = +3 / +3
Query: 441 TERTS*CHCEVTTWRILVGT*VH*QTG*TIGD 536
T R *C CE T RI G * *++G*T GD
Sbjct: 531 TRRI**CRCEATASRISAGM*AR*RSG*TTGD 626
Score = 32.7 bits (65), Expect(3) = 7e-032
Identities = 15/26 (57%), Positives = 17/26 (65%)
Frame = -2 / -2
Query: 536 VSNCLPSLSMHLRSY*YPPRCHFAMA 459
VS+CL + S L S *YP RC FA A
Sbjct: 626 VSSCLSTPSTCLHSC*YPRRCRFAAA 549
Score = 22.6 bits (43), Expect(3) = 7e-032
Identities = 8/19 (42%), Positives = 14/19 (73%)
Frame = -1 / -1
Query: 153 SRTRSPMLTWRRPAASARS 97
S+TRS ++TW+ ++S S
Sbjct: 312 SQTRSSLMTWQSRSSSQPS 256
>gb|CK216360.1|CK216360 FGAS028348 Triticum aestivum FGAS: Library 6 CAP GATE 1 Triticum
aestivum cDNA, mRNA sequence
Length = 1079
Score = 308 bits (666), Expect(2) = 7e-084
Identities = 120/138 (86%), Positives = 128/138 (92%)
Frame = +2 / -1
Query: 125 HVNIGDLVREKSLHDGWDADLECHVINEDLVCDELEDMMEEGGILVDYHGCDFFPERWFD 304
HVNIGDLVREK LHDGWD DL+CHVINEDLVCDELED MEEGG+LVDYHGCDFFPERWFD
Sbjct: 695 HVNIGDLVREKGLHDGWDEDLDCHVINEDLVCDELEDRMEEGGVLVDYHGCDFFPERWFD 516
Query: 305 LVVVLQTDNSILHDRLTGRGYMGSKLANNIECEIFQVLLEEARESYREDIVMPLRSDNVE 484
LVVVLQTDNSILHDRLT RGYMG+KL NNIECEIFQVLLEEARESY+EDIVMPLRSD+VE
Sbjct: 515 LVVVLQTDNSILHDRLTSRGYMGAKLTNNIECEIFQVLLEEARESYKEDIVMPLRSDSVE 336
Query: 485 DISRNVGALTDWVNNWRP 538
DI+RNV L +W+N RP
Sbjct: 335 DITRNVSTLAEWINKRRP 282
Score = 199 bits (430), Expect(2) = 7e-060
Identities = 85/118 (72%), Positives = 99/118 (83%)
Frame = -3 / +3
Query: 535 SPIVYPVCQCTYVPTNILHVVTSQWHHDVLSVALPRLLEEHLEDFALYVVGELGTHVTSA 356
SP VYP+ Q Y+P +IL V SQ HH +L VALPRLL+EHLED ALYVV ELGTHV SA
Sbjct: 285 SPFVYPLRQRAYIPGDILDAVASQRHHYILLVALPRLLQEHLEDLALYVVCELGTHVASA 464
Query: 355 RQAIMQN*VVSLEHNYEVKPTFWKEITSVVIY*YTTFFHHVLKLVAHQVLVDDMALEV 182
QAIMQN*VV L+H+++VKPTFWKEITSV+IY*YT FFH VLKL+ +QVLVDD+A+EV
Sbjct: 465 SQAIMQN*VVCLKHDHKVKPTFWKEITSVIIY*YTAFFHPVLKLITNQVLVDDVAVEV 638
Score = 151 bits (324), Expect = 8e-036
Identities = 76/113 (67%), Positives = 83/113 (73%)
Frame = +1 / -3
Query: 199 HQRGPGVRRA*GHDGRRWYTSRLPRM*FLSRTLV*PRSCAPD*QLNSA*SPDGQRLHGFQ 378
HQRGPG+ A*G DGRR TSRL RM*FLSRTLV*P A D QLNSA*S D QRLHG Q
Sbjct: 621 HQRGPGL**A*GQDGRRRCTSRLSRM*FLSRTLV*PCGRASDRQLNSA*SLD*QRLHGCQ 442
Query: 379 ARQQHRVRNLPSAPRGGEGELQRGHRDAIAK*QRGGY**ERRCIDRLGKQLET 537
A +QHRVR+LP AP GGEGELQ G+ DA AK QR GY E + + + KQ ET
Sbjct: 441 AHKQHRVRDLPGAPGGGEGELQGGYSDAAAKRQRRGYHQECKHVGGVDKQKET 283
Score = 120 bits (257), Expect(3) = 3e-031
Identities = 49/65 (75%), Positives = 54/65 (83%)
Frame = -2 / +2
Query: 419 GALGRFRTLCCWRAWNPCNLCPSGDHAELSCQSGAQLRGQTNVLERNHIRGNLLVYHLLP 240
GA GR RTLCC AW+PC+LC S DHAELSC S A+ +GQTNVLERNHIR NLLV+ LLP
Sbjct: 401 GAPGRSRTLCCL*AWHPCSLC*SSDHAELSCLSEARPQGQTNVLERNHIRDNLLVHRLLP 580
Query: 239 SCPQA 225
SCPQA
Sbjct: 581 SCPQA 595
Score = 119 bits (254), Expect = 4e-026
Identities = 56/79 (70%), Positives = 60/79 (75%)
Frame = -1 / +1
Query: 516 SVNAPTFLLISSTLSLRNGITMXXXXXXXXXXXSTWKISHSMLLASLEPM*PLPVRRSCR 337
S N TFL+ISSTLSLR+GIT+ STWKISHSML SL PM*PL V+RSCR
Sbjct: 304 SANVLTFLVISSTLSLRSGITISSL*LSLASSRSTWKISHSMLFVSLAPM*PLLVKRSCR 483
Query: 336 IELSVWSTTTRSNQRSGKK 280
IELSV STTTRSNQRSGKK
Sbjct: 484 IELSV*STTTRSNQRSGKK 540
Score = 106 bits (227), Expect(2) = 3e-026
Identities = 49/64 (76%), Positives = 50/64 (78%)
Frame = +3 / -2
Query: 183 TSSAMSSTRTWCATSLRT*WKKVVY**ITTDVISFQNVGLTS*LCSRLTTQFCMIA*RAE 362
TS+A SSTRTW SLRT WKK VY**I TDVISFQNVGLT C R TTQFCMIA* AE
Sbjct: 637 TSTATSSTRTWFVMSLRTGWKKAVY**IITDVISFQNVGLTLWSCFRQTTQFCMIA*LAE 458
Query: 363 VTWV 374
TWV
Sbjct: 457 ATWV 446
Score = 51.9 bits (107), Expect(2) = 7e-060
Identities = 22/26 (84%), Positives = 23/26 (88%)
Frame = -1 / +1
Query: 204 LMTWHSRSASQPS*RLFSRTRSPMLT 127
LMTW SRS+SQPS R FSRTRSPMLT
Sbjct: 616 LMTWQSRSSSQPSWRPFSRTRSPMLT 693
Score = 32.2 bits (64), Expect(2) = 3e-026
Identities = 18/37 (48%), Positives = 20/37 (54%)
Frame = +3 / -2
Query: 441 TERTS*CHCEVTTWRILVGT*VH*QTG*TIGDLVRPV 551
T R *C CE T RI G * ++G*T GD R V
Sbjct: 379 TRRI**CRCEATASRISPGM*ARWRSG*TKGDPPREV 269
Score = 30.4 bits (60), Expect(3) = 3e-031
Identities = 14/26 (53%), Positives = 16/26 (61%)
Frame = -2 / +2
Query: 536 VSNCLPSLSMHLRSY*YPPRCHFAMA 459
VS CL + L S+*YP RC FA A
Sbjct: 284 VSFCLSTPPTCLHSW*YPRRCRFAAA 361
Score = 24.0 bits (46), Expect(2) = 7e-084
Identities = 11/27 (40%), Positives = 13/27 (48%)
Frame = +2 / -3
Query: 41 RPNVLVXXXXXXXXXXXCSLLADAAGL 121
RP +L CSLLAD AG+
Sbjct: 780 RPKLL*PGTPGTGKTTTCSLLADPAGV 700
Score = 22.6 bits (43), Expect(3) = 3e-031
Identities = 8/19 (42%), Positives = 14/19 (73%)
Frame = -1 / +1
Query: 153 SRTRSPMLTWRRPAASARS 97
S+TRS ++TW+ ++S S
Sbjct: 598 SQTRSSLMTWQSRSSSQPS 654
>gb|BQ244073.1|BQ244073 TaE15005C07F TaE15 Triticum aestivum cDNA clone TaE15005C07F, mRNA
sequence
Length = 601
Score = 291 bits (629), Expect = 7e-078
Identities = 112/125 (89%), Positives = 119/125 (95%)
Frame = +2 / -1
Query: 167 DGWDADLECHVINEDLVCDELEDMMEEGGILVDYHGCDFFPERWFDLVVVLQTDNSILHD 346
DGWD DL+CHVINEDLVCDELED MEEGG+LVDYHGCDFFPERWFDLVVVLQTDNSILHD
Sbjct: 601 DGWDEDLDCHVINEDLVCDELEDRMEEGGVLVDYHGCDFFPERWFDLVVVLQTDNSILHD 422
Query: 347 RLTGRGYMGSKLANNIECEIFQVLLEEARESYREDIVMPLRSDNVEDISRNVGALTDWVN 526
RLT RGYMG+KL NNIECEIFQVLLEEARESY+EDIVMPLRSD+VEDISRNV LT+W+N
Sbjct: 421 RLTSRGYMGAKLTNNIECEIFQVLLEEARESYKEDIVMPLRSDSVEDISRNVSTLTEWIN 242
Query: 527 NWRPS 541
NWRPS
Sbjct: 241 NWRPS 227
Score = 203 bits (437), Expect = 2e-051
Identities = 87/123 (70%), Positives = 102/123 (82%)
Frame = -3 / +2
Query: 550 TGLTRSPIVYPVCQCTYVPTNILHVVTSQWHHDVLSVALPRLLEEHLEDFALYVVGELGT 371
T L SP+VYP+ Q Y+P +IL V SQ HH +L VALPRLL+EHLED ALYVV ELGT
Sbjct: 218 TSL*WSPVVYPLRQRAYIPADILDAVASQRHHYILLVALPRLLQEHLEDLALYVVCELGT 397
Query: 370 HVTSARQAIMQN*VVSLEHNYEVKPTFWKEITSVVIY*YTTFFHHVLKLVAHQVLVDDMA 191
HV SA QAIMQN*VV L+H+++VKPTFWKEITSV+IY*YT FFH VLKL+ +QVLVDD+A
Sbjct: 398 HVASASQAIMQN*VVCLKHDHKVKPTFWKEITSVIIY*YTAFFHPVLKLITNQVLVDDVA 577
Query: 190 LEV 182
+EV
Sbjct: 578 VEV 586
Score = 157 bits (337), Expect = 1e-037
Identities = 78/113 (69%), Positives = 85/113 (75%)
Frame = +1 / -3
Query: 199 HQRGPGVRRA*GHDGRRWYTSRLPRM*FLSRTLV*PRSCAPD*QLNSA*SPDGQRLHGFQ 378
HQRGPG+ A*G DGRR TSRL RM*FLSRTLV*P A D QLNSA*S D QRLHG Q
Sbjct: 569 HQRGPGL**A*GQDGRRRCTSRLSRM*FLSRTLV*PCGRASDRQLNSA*SLD*QRLHGCQ 390
Query: 379 ARQQHRVRNLPSAPRGGEGELQRGHRDAIAK*QRGGY**ERRCIDRLGKQLET 537
A +QHRVR+LP AP GGEGELQ G+ DA AK QR GY E + +D + KQLET
Sbjct: 389 AHKQHRVRDLPGAPGGGEGELQGGYSDAAAKRQRRGYQQECKHVDGVDKQLET 231
Score = 122 bits (261), Expect(2) = 2e-027
Identities = 58/79 (73%), Positives = 61/79 (77%)
Frame = -1 / +3
Query: 516 SVNAPTFLLISSTLSLRNGITMXXXXXXXXXXXSTWKISHSMLLASLEPM*PLPVRRSCR 337
SVN TFLLISSTLSLR+GIT+ STWKISHSML SL PM*PL V+RSCR
Sbjct: 252 SVNVLTFLLISSTLSLRSGITISSL*LSLASSRSTWKISHSMLFVSLAPM*PLLVKRSCR 431
Query: 336 IELSVWSTTTRSNQRSGKK 280
IELSV STTTRSNQRSGKK
Sbjct: 432 IELSV*STTTRSNQRSGKK 488
Score = 120 bits (257), Expect(3) = 2e-033
Identities = 49/65 (75%), Positives = 54/65 (83%)
Frame = -2 / +1
Query: 419 GALGRFRTLCCWRAWNPCNLCPSGDHAELSCQSGAQLRGQTNVLERNHIRGNLLVYHLLP 240
GA GR RTLCC AW+PC+LC S DHAELSC S A+ +GQTNVLERNHIR NLLV+ LLP
Sbjct: 349 GAPGRSRTLCCL*AWHPCSLC*SSDHAELSCLSEARPQGQTNVLERNHIRDNLLVHRLLP 528
Query: 239 SCPQA 225
SCPQA
Sbjct: 529 SCPQA 543
Score = 106 bits (227), Expect(2) = 5e-027
Identities = 49/64 (76%), Positives = 50/64 (78%)
Frame = +3 / -2
Query: 183 TSSAMSSTRTWCATSLRT*WKKVVY**ITTDVISFQNVGLTS*LCSRLTTQFCMIA*RAE 362
TS+A SSTRTW SLRT WKK VY**I TDVISFQNVGLT C R TTQFCMIA* AE
Sbjct: 585 TSTATSSTRTWFVMSLRTGWKKAVY**IITDVISFQNVGLTLWSCFRQTTQFCMIA*LAE 406
Query: 363 VTWV 374
TWV
Sbjct: 405 ATWV 394
Score = 35.0 bits (70), Expect(2) = 5e-027
Identities = 17/32 (53%), Positives = 19/32 (59%)
Frame = +3 / -2
Query: 441 TERTS*CHCEVTTWRILVGT*VH*QTG*TIGD 536
T R *C CE T RI G * *++G*T GD
Sbjct: 327 TRRI**CRCEATASRISAGM*AR*RSG*TTGD 232
Score = 32.7 bits (65), Expect(3) = 2e-033
Identities = 15/26 (57%), Positives = 17/26 (65%)
Frame = -2 / +1
Query: 536 VSNCLPSLSMHLRSY*YPPRCHFAMA 459
VS+CL + S L S *YP RC FA A
Sbjct: 232 VSSCLSTPSTCLHSC*YPRRCRFAAA 309
Score = 28.1 bits (55), Expect(3) = 2e-033
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = -1 / +3
Query: 204 LMTWHSRSASQP 169
LMTW SRS+SQP
Sbjct: 564 LMTWQSRSSSQP 599
Score = 22.1 bits (42), Expect(2) = 2e-027
Identities = 7/16 (43%), Positives = 13/16 (81%)
Frame = -1 / +3
Query: 153 SRTRSPMLTWRRPAAS 106
S+TRS ++TW+ ++S
Sbjct: 546 SQTRSSLMTWQSRSSS 593
>gb|CA609769.1|CA609769 wr1.pk0110.e1 wr1 Triticum aestivum cDNA clone wr1.pk0110.e1 5'
end, mRNA sequence
Length = 474
Score = 251 bits (542), Expect = 7e-066
Identities = 99/125 (79%), Positives = 104/125 (83%)
Frame = +2 / +2
Query: 38 ARPNVLVXXXXXXXXXXXCSLLADAAGLRHVNIGDLVREKSLHDGWDADLECHVINEDLV 217
ARPNVLV CSLLADAAG+ HVNIGDLVREK LHDGWD DL+CHVINEDLV
Sbjct: 17 ARPNVLVTGTPGTGKTTTCSLLADAAGVAHVNIGDLVREKGLHDGWDEDLDCHVINEDLV 196
Query: 218 CDELEDMMEEGGILVDYHGCDFFPERWFDLVVVLQTDNSILHDRLTGRGYMGSKLANNIE 397
CDELED MEEGG+LVDYHGCDFFPERWFDLVVVL TDNSILHDRLT RGYMG+ L NNI
Sbjct: 197 CDELEDRMEEGGVLVDYHGCDFFPERWFDLVVVLXTDNSILHDRLTSRGYMGAXLTNNIX 376
Query: 398 CEIFQ 412
CE F+
Sbjct: 377 CEXFK 391
Score = 136 bits (291), Expect(2) = 8e-048
Identities = 59/90 (65%), Positives = 71/90 (78%)
Frame = -3 / -3
Query: 451 VLSVALPRLLEEHLEDFALYVVGELGTHVTSARQAIMQN*VVSLEHNYEVKPTFWKEITS 272
+ S+ P LE LYVV E GTHV SARQAIMQN*VV +H+++VKPTFWKEITS
Sbjct: 430 ISSLXXPWXXPGALEXLTLYVVCEXGTHVASARQAIMQN*VVGXKHDHKVKPTFWKEITS 251
Query: 271 VVIY*YTTFFHHVLKLVAHQVLVDDMALEV 182
V+IY*YT FFH VL+L+A+QVLVDD+A+EV
Sbjct: 250 VIIY*YTAFFHPVLELIANQVLVDDVAVEV 161
Score = 111 bits (237), Expect = 8e-024
Identities = 53/92 (57%), Positives = 55/92 (59%)
Frame = +3 / +3
Query: 99 SLPTPQXXXXXXXXXXXXXXXXXXXXXPTSSAMSSTRTWCATSLRT*WKKVVY**ITTDV 278
S PTP+ TS+A SSTRTW A S RT WKK VY**I TDV
Sbjct: 78 SSPTPRAWRTSTSATWSARRASTTAGTRTSTATSSTRTWFAMSSRTGWKKAVY**IITDV 257
Query: 279 ISFQNVGLTS*LCSRLTTQFCMIA*RAEVTWV 374
ISFQNVGLT C TTQFCMIA*RAE TWV
Sbjct: 258 ISFQNVGLTLWSCFXPTTQFCMIA*RAEATWV 353
Score = 107 bits (229), Expect(2) = 1e-023
Identities = 41/58 (70%), Positives = 48/58 (82%)
Frame = -2 / -2
Query: 398 TLCCWRAWNPCNLCPSGDHAELSCQSGAQLRGQTNVLERNHIRGNLLVYHLLPSCPQA 225
T CC AW+PC+LC S DHAELSC+ A+ +GQTNVLERNHIR NLLV+ LLPSCP+A
Sbjct: 377 TXCCL*AWHPCSLCSSSDHAELSCRXEARPQGQTNVLERNHIRDNLLVHRLLPSCPRA 204
Score = 75.3 bits (158), Expect(2) = 8e-048
Identities = 37/56 (66%), Positives = 38/56 (67%)
Frame = -1 / -1
Query: 204 LMTWHSRSASQPS*RLFSRTRSPMLTWRRPAASARSEHXXXXXXXXXXVTSTFGRA 37
LMTW SRS+SQPS R FSRTRSPMLT PAASAR EH VTST GRA
Sbjct: 183 LMTWQSRSSSQPSWRPFSRTRSPMLTCATPAASARREHVVVFPVPGVPVTSTLGRA 16
Score = 22.6 bits (43), Expect(2) = 1e-023
Identities = 8/19 (42%), Positives = 14/19 (73%)
Frame = -1 / -1
Query: 153 SRTRSPMLTWRRPAASARS 97
S+TRS ++TW+ ++S S
Sbjct: 201 SQTRSSLMTWQSRSSSQPS 145
>gb|CA736833.1|CA736833 wpi1s.pk008.d3 wpi1s Triticum aestivum cDNA clone wpi1s.pk008.d3 5'
end, mRNA sequence
Length = 338
Score = 223 bits (482), Expect = 1e-057
Identities = 87/98 (88%), Positives = 93/98 (94%)
Frame = +2 / -3
Query: 248 GGILVDYHGCDFFPERWFDLVVVLQTDNSILHDRLTGRGYMGSKLANNIECEIFQVLLEE 427
G +LVDYHGCDFFPERWFDLVVVLQTDNSILHDRLT RGYMG+KL NNIECEIFQVLLEE
Sbjct: 324 GQVLVDYHGCDFFPERWFDLVVVLQTDNSILHDRLTSRGYMGAKLTNNIECEIFQVLLEE 145
Query: 428 ARESYREDIVMPLRSDNVEDISRNVGALTDWVNNWRPS 541
ARESY+EDIVMPLRSD+VEDISRNV LT+W+NNWRPS
Sbjct: 144 ARESYKEDIVMPLRSDSVEDISRNVSTLTEWINNWRPS 31
Score = 163 bits (351), Expect = 2e-039
Identities = 68/99 (68%), Positives = 80/99 (80%)
Frame = -3 / +1
Query: 550 TGLTRSPIVYPVCQCTYVPTNILHVVTSQWHHDVLSVALPRLLEEHLEDFALYVVGELGT 371
T L SP+VYP+ Q +VP +IL V SQWHH +L V LPRLL+EHLED ALYVV ELG
Sbjct: 22 TSLGWSPVVYPLRQRAHVPADILDAVASQWHHYILLVTLPRLLQEHLEDLALYVVCELGP 201
Query: 370 HVTSARQAIMQN*VVSLEHNYEVKPTFWKEITSVVIY*Y 254
HV SA QAIMQN*+V L+H+++VKPTFWKEITSV+IY*Y
Sbjct: 202 HVASASQAIMQN*IVGLKHDHKVKPTFWKEITSVIIY*Y 318
Score = 131 bits (280), Expect = 1e-029
Identities = 65/94 (69%), Positives = 70/94 (74%)
Frame = +1 / -2
Query: 256 TSRLPRM*FLSRTLV*PRSCAPD*QLNSA*SPDGQRLHGFQARQQHRVRNLPSAPRGGEG 435
TSRL RM*FLSRTLV*P A D Q NSA*S D QRLHG QA +QHRVR+LP AP GGEG
Sbjct: 316 TSRLSRM*FLSRTLV*PCGRASDRQFNSA*SLD*QRLHGGQAHKQHRVRDLPGAPGGGEG 137
Query: 436 ELQRGHRDAIAK*QRGGY**ERRCIDRLGKQLET 537
ELQ G+ DA AK QR GY ER +D + KQLET
Sbjct: 136 ELQGGYSDATAKRQRRGYQQEREHVDGVDKQLET 35
Score = 122 bits (261), Expect = 4e-027
Identities = 58/79 (73%), Positives = 61/79 (77%)
Frame = -1 / +2
Query: 516 SVNAPTFLLISSTLSLRNGITMXXXXXXXXXXXSTWKISHSMLLASLEPM*PLPVRRSCR 337
SVN TFLLISSTLSLR+GIT+ STWKISHSML SL PM*PL V+RSCR
Sbjct: 56 SVNVLTFLLISSTLSLRSGITISSL*LSLASSRSTWKISHSMLFVSLAPM*PLLVKRSCR 235
Query: 336 IELSVWSTTTRSNQRSGKK 280
IELSV STTTRSNQRSGKK
Sbjct: 236 IELSV*STTTRSNQRSGKK 292
Score = 98.2 bits (208), Expect(2) = 5e-024
Identities = 40/55 (72%), Positives = 45/55 (81%)
Frame = -2 / +3
Query: 419 GALGRFRTLCCWRAWNPCNLCPSGDHAELSCQSGAQLRGQTNVLERNHIRGNLLV 255
GA GR RTLCC AW PC+LC S DHAEL+C+S A+ +GQTNVLERNHIR NLLV
Sbjct: 153 GAPGRSRTLCCL*AWPPCSLC*SSDHAELNCRSEARPQGQTNVLERNHIRDNLLV 317
Score = 33.1 bits (66), Expect(2) = 5e-024
Identities = 15/26 (57%), Positives = 18/26 (69%)
Frame = -2 / +3
Query: 536 VSNCLPSLSMHLRSY*YPPRCHFAMA 459
VS+CL + S RS *YP RC FA+A
Sbjct: 36 VSSCLSTPSTCSRSC*YPRRCRFAVA 113
>gb|CA593339.1|CA593339 wpa1c.pk003.g18 wpa1c Triticum aestivum cDNA clone wpa1c.pk003.g18
5' end, mRNA sequence
Length = 473
Score = 186 bits (400), Expect(2) = 9e-052
Identities = 74/84 (88%), Positives = 79/84 (94%)
Frame = +2 / +1
Query: 245 EGGILVDYHGCDFFPERWFDLVVVLQTDNSILHDRLTGRGYMGSKLANNIECEIFQVLLE 424
EGG+LV YHGCDFFPERWFDLVVVLQTDNSILHDRLT RGYMG+KL NNIECEIFQVLLE
Sbjct: 1 EGGVLVXYHGCDFFPERWFDLVVVLQTDNSILHDRLTSRGYMGAKLTNNIECEIFQVLLE 180
Query: 425 EARESYREDIVMPLRSDNVEDISR 496
EARESY+EDIVMPLRSD+V DI +
Sbjct: 181 EARESYKEDIVMPLRSDSVXDIKQ 252
Score = 142 bits (304), Expect = 5e-033
Identities = 61/82 (74%), Positives = 69/82 (84%)
Frame = -3 / -3
Query: 490 NILHVVTSQWHHDVLSVALPRLLEEHLEDFALYVVGELGTHVTSARQAIMQN*VVSLEHN 311
+IL V SQ HH +L VALPRLL+EHLED ALYVV ELGTHV SA QAIMQN*VV L+H+
Sbjct: 246 DILDAVASQRHHYILLVALPRLLQEHLEDLALYVVCELGTHVASASQAIMQN*VVCLKHD 67
Query: 310 YEVKPTFWKEITSVVIY*YTTF 245
++VKPTFWKEITSV+ Y*YT F
Sbjct: 66 HKVKPTFWKEITSVIXY*YTAF 1
Score = 117 bits (250), Expect = 1e-025
Identities = 57/78 (73%), Positives = 60/78 (76%)
Frame = +1 / +3
Query: 256 TSRLPRM*FLSRTLV*PRSCAPD*QLNSA*SPDGQRLHGFQARQQHRVRNLPSAPRGGEG 435
TS L RM*FLSRTLV*P A D QLNSA*S D QRLHG QA +QHRVR+LP AP GGEG
Sbjct: 12 TSXLSRM*FLSRTLV*PCGRASDRQLNSA*SLD*QRLHGCQAHKQHRVRDLPGAPGGGEG 191
Query: 436 ELQRGHRDAIAK*QRGGY 489
ELQ G+ DA AK QR GY
Sbjct: 192 ELQGGYSDAAAKRQRXGY 245
Score = 108 bits (231), Expect = 6e-023
Identities = 51/71 (71%), Positives = 54/71 (76%)
Frame = -1 / -1
Query: 492 LISSTLSLRNGITMXXXXXXXXXXXSTWKISHSMLLASLEPM*PLPVRRSCRIELSVWST 313
LIS TLSLR+GIT+ STWKISHSML SL PM*PL V+RSCRIELSV ST
Sbjct: 248 LISXTLSLRSGITISSL*LSLASSRSTWKISHSMLFVSLAPM*PLLVKRSCRIELSV*ST 69
Query: 312 TTRSNQRSGKK 280
TTRSNQRSGKK
Sbjct: 68 TTRSNQRSGKK 36
Score = 38.6 bits (78), Expect(2) = 9e-052
Identities = 12/17 (70%), Positives = 14/17 (82%)
Frame = +2 / +2
Query: 491 SRNVGALTDWVNNWRPS 541
SRNV T+W+NNWRPS
Sbjct: 248 SRNVSTXTEWINNWRPS 298
Database: Triticum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 3:01 PM
Number of letters in database: 367,240,239
Number of sequences in database: 636,343
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 558,395,397
Number of Sequences: 636343
Number of extensions: 7833678
Number of successful extensions: 96100
Number of sequences better than 1.0e-020: 8
length of database: 122,413,413
effective HSP length: 53
effective length of database: 88,687,234
effective search space used: 15520265950
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)