TBLASTX 2.2.10 [Oct-19-2004]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 2921788.2.1
         (606 letters)

Database: Triticum_nucl_with_EST.fasta 
           636,343 sequences; 367,240,239 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|CK217415.1|CK217415  FGAS029417 Triticum aestivum FGAS: L...   116   2e-038
gb|CK205923.1|CK205923  FGAS017484 Triticum aestivum FGAS: L...   116   4e-038
gb|CA650869.1|CA650869  wre1n.pk160.d8 wre1n Triticum aestiv...   108   7e-023

>gb|CK217415.1|CK217415 FGAS029417 Triticum aestivum FGAS: Library 6 CAP GATE 1 Triticum
           aestivum cDNA, mRNA sequence
          Length = 1056

 Score =  116 bits (249), Expect(2) = 2e-038
 Identities = 49/65 (75%), Positives = 52/65 (80%)
 Frame = +1 / +3

                                                                       
Query: 175 AWCFSDPEMKRRRRVASYKAYSAEGKVKASFPRGFRWIKAKCSELIHG*TRHLGEILLYW 354
           AWCFSDPE+KRRRRVASYKAYS EGKVKASF RGFRWIK KC+  IHG* R LG +LL  
Sbjct: 306 AWCFSDPEVKRRRRVASYKAYSVEGKVKASFRRGFRWIKDKCTGFIHG*IRGLG*VLLGD 485

                
Query: 355 HGARC 369
              RC
Sbjct: 486 RRRRC 500




 Score = 62.9 bits (131), Expect(2) = 2e-038
 Identities = 21/25 (84%), Positives = 25/25 (100%)
 Frame = +1 / +3

                                    
Query: 46  EYDRPYRNEVVPYGDRRIDIIVKPP 120
           +YDRPYRNE+VPYGDRRID++VKPP
Sbjct: 162 DYDRPYRNEIVPYGDRRIDLVVKPP 236



>gb|CK205923.1|CK205923 FGAS017484 Triticum aestivum FGAS: Library 5 GATE 7 Triticum
           aestivum cDNA, mRNA sequence
          Length = 1124

 Score =  116 bits (249), Expect(2) = 4e-038
 Identities = 49/65 (75%), Positives = 52/65 (80%)
 Frame = +1 / -1

                                                                       
Query: 175 AWCFSDPEMKRRRRVASYKAYSAEGKVKASFPRGFRWIKAKCSELIHG*TRHLGEILLYW 354
           AWCFSDPE+KRRRRVASYKAYS EGKVKASF RGFRWIK KC+  IHG* R LG +LL  
Sbjct: 542 AWCFSDPEVKRRRRVASYKAYSVEGKVKASFRRGFRWIKDKCTGFIHG*IRGLG*VLLGD 363

                
Query: 355 HGARC 369
              RC
Sbjct: 362 RRRRC 348




 Score = 62.0 bits (129), Expect(2) = 4e-038
 Identities = 21/24 (87%), Positives = 24/24 (100%)
 Frame = +1 / -1

                                   
Query: 49  YDRPYRNEVVPYGDRRIDIIVKPP 120
           YDRPYRNE+VPYGDRRID++VKPP
Sbjct: 683 YDRPYRNEIVPYGDRRIDLVVKPP 612



>gb|CA650869.1|CA650869 wre1n.pk160.d8 wre1n Triticum aestivum cDNA clone wre1n.pk160.d8 5'
           end, mRNA sequence
          Length = 443

 Score =  108 bits (230), Expect = 7e-023
 Identities = 45/56 (80%), Positives = 48/56 (85%)
 Frame = +1 / +3

                                                                   
Query: 181 CFSDPEMKRRRRVASYKAYSAEGKVKASFPRGFRWIKAKCSELIHG*TRHLGEILL 348
           CFSDPE+KRRRRVASYKAYS EGKVKASF RGFRWIK KC+  IHG* R LG +LL
Sbjct: 3   CFSDPEVKRRRRVASYKAYSVEGKVKASFRRGFRWIKDKCTGFIHG*IRGLG*VLL 170



  Database: Triticum_nucl_with_EST.fasta
    Posted date:  Feb 7, 2006  3:01 PM
  Number of letters in database: 367,240,239
  Number of sequences in database:  636,343
  
Lambda     K      H
   0.318    0.134    0.401 


Matrix: BLOSUM62
Number of Hits to DB: 457,056,530
Number of Sequences: 636343
Number of extensions: 6334599
Number of successful extensions: 80649
Number of sequences better than 1.0e-020: 5
length of database: 122,413,413
effective HSP length: 53
effective length of database: 88,687,234
effective search space used: 13125710632
frameshift window, decay const: 40,  0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)