TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2646712.2.1
(581 letters)
Database: Triticum_nucl_with_EST.fasta
636,343 sequences; 367,240,239 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CK206554.1|CK206554 FGAS018152 Triticum aestivum FGAS: L... 137 9e-032
gb|BQ168574.1|BQ168574 WHE2460_D05_G10ZT Triticum monococcu... 136 2e-031
gb|CD878098.1|CD878098 AZO4.101O08R011121 AZO4 Triticum aes... 136 2e-031
gb|CD929976.1|CD929976 GR45.109L15F010417 GR45 Triticum aes... 136 2e-031
gb|CD929977.1|CD929977 GR45.109L15R010612 GR45 Triticum aes... 136 2e-031
gb|CK209046.1|CK209046 FGAS020782 Triticum aestivum FGAS: L... 136 2e-031
gb|DR739700.1|DR739700 FGAS084917 Triticum aestivum FGAS: L... 136 2e-031
gb|AF307997.1|AF307997 Triticum aestivum cinnamoyl-CoA redu... 136 2e-031
gb|BE400455.1|BE400455 AWB003.H04F000328 ITEC AWB Wheat Mei... 129 2e-029
gb|CA701379.1|CA701379 wkm2c.pk005.p10 wkm2c Triticum aesti... 128 4e-029
gb|CA638309.1|CA638309 wre1n.pk0008.d2 wre1n Triticum aesti... 123 1e-027
gb|CV759318.1|CV759318 FGAS053701 Triticum aestivum FGAS: L... 121 6e-027
gb|CN008270.1|CN008270 WHE2639_C08_F15ZE Wheat Fusarium gra... 115 4e-025
gb|BE403213.1|BE403213 WHE0426_G02_M04ZS Wheat etiolated se... 115 5e-025
gb|CA731337.1|CA731337 wip1c.pk006.p20 wip1c Triticum aesti... 106 2e-022
gb|BQ169888.1|BQ169888 WHE0976_E11_I22ZT Wheat pre-anthesis... 105 6e-022
gb|CD878802.1|CD878802 AZO4.103K12R011122 AZO4 Triticum aes... 105 6e-022
gb|CD935432.1|CD935432 OV.101I12R010424 OV Triticum aestivu... 105 6e-022
gb|CD454939.1|CD454939 WHE2013_A04_A07ZT CS wheat drought s... 103 2e-021
gb|BJ278739.1|BJ278739 BJ278739 Y. Ogihara unpublished cDNA... 101 7e-021
gb|BJ283791.1|BJ283791 BJ283791 Y. Ogihara unpublished cDNA... 101 7e-021
gb|BQ788904.1|BQ788904 WHE4155_B07_C13ZS Wheat CS whole pla... 101 7e-021
>gb|CK206554.1|CK206554 FGAS018152 Triticum aestivum FGAS: Library 5 GATE 7 Triticum
aestivum cDNA, mRNA sequence
Length = 1139
Score = 137 bits (294), Expect = 9e-032
Identities = 54/79 (68%), Positives = 65/79 (82%)
Frame = -1 / +1
Query: 578 AAGRYICADAVLHREDVVRTLRKSFPGYPVPERCSDEVNPRKQPYKISNQRLRELGLEFT 399
A+GR++CA+ VLHREDVV L K FP YPVP RCSDEVNPRKQPYK+SNQ+L++LGL+FT
Sbjct: 523 ASGRHLCAERVLHREDVVHILGKLFPEYPVPTRCSDEVNPRKQPYKMSNQKLQDLGLQFT 702
Query: 398 PAAQALYDTVVCFQEKGIL 342
P +LY+TV QEKG L
Sbjct: 703 PVNDSLYETVKSLQEKGAL 759
>gb|BQ168574.1|BQ168574 WHE2460_D05_G10ZT Triticum monococcum early reproductive apex cDNA
library Triticum monococcum cDNA clone WHE2460_D05_G10,
mRNA sequence
Length = 522
Score = 136 bits (292), Expect = 2e-031
Identities = 54/79 (68%), Positives = 65/79 (82%)
Frame = -1 / -1
Query: 578 AAGRYICADAVLHREDVVRTLRKSFPGYPVPERCSDEVNPRKQPYKISNQRLRELGLEFT 399
A+GR++CA+ VLHREDVV L K FP YPVP RCSDEVNPRKQPYK+SNQ+L++LGL+FT
Sbjct: 492 ASGRHLCAERVLHREDVVHILGKLFPEYPVPTRCSDEVNPRKQPYKMSNQKLQDLGLQFT 313
Query: 398 PAAQALYDTVVCFQEKGIL 342
P +LY+TV QEKG L
Sbjct: 312 PVNDSLYETVKSLQEKGHL 256
>gb|CD878098.1|CD878098 AZO4.101O08R011121 AZO4 Triticum aestivum cDNA clone AZO4101O08,
mRNA sequence
Length = 591
Score = 136 bits (292), Expect = 2e-031
Identities = 54/79 (68%), Positives = 65/79 (82%)
Frame = -1 / -1
Query: 578 AAGRYICADAVLHREDVVRTLRKSFPGYPVPERCSDEVNPRKQPYKISNQRLRELGLEFT 399
A+GR++CA+ VLHREDVV L K FP YPVP RCSDEVNPRKQPYK+SNQ+L++LGL+FT
Sbjct: 582 ASGRHLCAERVLHREDVVHILGKLFPEYPVPTRCSDEVNPRKQPYKMSNQKLQDLGLQFT 403
Query: 398 PAAQALYDTVVCFQEKGIL 342
P +LY+TV QEKG L
Sbjct: 402 PVNDSLYETVKSLQEKGHL 346
>gb|CD929976.1|CD929976 GR45.109L15F010417 GR45 Triticum aestivum cDNA clone GR45109L15,
mRNA sequence
Length = 712
Score = 136 bits (292), Expect = 2e-031
Identities = 54/79 (68%), Positives = 65/79 (82%)
Frame = -1 / +1
Query: 578 AAGRYICADAVLHREDVVRTLRKSFPGYPVPERCSDEVNPRKQPYKISNQRLRELGLEFT 399
A+GR++CA+ VLHREDVV L K FP YPVP RCSDEVNPRKQPYK+SNQ+L++LGL+FT
Sbjct: 259 ASGRHLCAERVLHREDVVHILGKLFPEYPVPTRCSDEVNPRKQPYKMSNQKLQDLGLQFT 438
Query: 398 PAAQALYDTVVCFQEKGIL 342
P +LY+TV QEKG L
Sbjct: 439 PVNDSLYETVKSLQEKGHL 495
>gb|CD929977.1|CD929977 GR45.109L15R010612 GR45 Triticum aestivum cDNA clone GR45109L15,
mRNA sequence
Length = 570
Score = 136 bits (292), Expect = 2e-031
Identities = 54/79 (68%), Positives = 65/79 (82%)
Frame = -1 / -1
Query: 578 AAGRYICADAVLHREDVVRTLRKSFPGYPVPERCSDEVNPRKQPYKISNQRLRELGLEFT 399
A+GR++CA+ VLHREDVV L K FP YPVP RCSDEVNPRKQPYK+SNQ+L++LGL+FT
Sbjct: 441 ASGRHLCAERVLHREDVVHILGKLFPEYPVPTRCSDEVNPRKQPYKMSNQKLQDLGLQFT 262
Query: 398 PAAQALYDTVVCFQEKGIL 342
P +LY+TV QEKG L
Sbjct: 261 PVNDSLYETVKSLQEKGHL 205
>gb|CK209046.1|CK209046 FGAS020782 Triticum aestivum FGAS: Library 5 GATE 7 Triticum
aestivum cDNA, mRNA sequence
Length = 1167
Score = 136 bits (292), Expect = 2e-031
Identities = 54/79 (68%), Positives = 65/79 (82%)
Frame = -1 / -2
Query: 578 AAGRYICADAVLHREDVVRTLRKSFPGYPVPERCSDEVNPRKQPYKISNQRLRELGLEFT 399
A+GR++CA+ VLHREDVV L K FP YPVP RCSDEVNPRKQPYK+SNQ+L++LGL+FT
Sbjct: 512 ASGRHLCAERVLHREDVVHILGKLFPEYPVPTRCSDEVNPRKQPYKMSNQKLQDLGLQFT 333
Query: 398 PAAQALYDTVVCFQEKGIL 342
P +LY+TV QEKG L
Sbjct: 332 PVNDSLYETVKSLQEKGHL 276
>gb|DR739700.1|DR739700 FGAS084917 Triticum aestivum FGAS: Library 6 CAP GATE 1 Triticum
aestivum cDNA, mRNA sequence
Length = 1056
Score = 136 bits (292), Expect = 2e-031
Identities = 54/79 (68%), Positives = 65/79 (82%)
Frame = -1 / +1
Query: 578 AAGRYICADAVLHREDVVRTLRKSFPGYPVPERCSDEVNPRKQPYKISNQRLRELGLEFT 399
A+GR++CA+ VLHREDVV L K FP YPVP RCSDEVNPRKQPYK+SNQ+L++LGL+FT
Sbjct: 91 ASGRHLCAERVLHREDVVHILGKLFPEYPVPTRCSDEVNPRKQPYKMSNQKLQDLGLQFT 270
Query: 398 PAAQALYDTVVCFQEKGIL 342
P +LY+TV QEKG L
Sbjct: 271 PVNDSLYETVKSLQEKGHL 327
>gb|AF307997.1|AF307997 Triticum aestivum cinnamoyl-CoA reductase I mRNA, partial cds
Length = 696
Score = 136 bits (292), Expect = 2e-031
Identities = 54/79 (68%), Positives = 65/79 (82%)
Frame = -1 / +1
Query: 578 AAGRYICADAVLHREDVVRTLRKSFPGYPVPERCSDEVNPRKQPYKISNQRLRELGLEFT 399
A+GR++CA+ VLHREDVV L K FP YPVP RCSDEVNPRKQPYK+SNQ+L++LGL+FT
Sbjct: 460 ASGRHLCAERVLHREDVVHILGKLFPEYPVPTRCSDEVNPRKQPYKMSNQKLQDLGLQFT 639
Query: 398 PAAQALYDTVVCFQEKGIL 342
P +LY+TV QEKG L
Sbjct: 640 PVNDSLYETVKSLQEKGHL 696
>gb|BE400455.1|BE400455 AWB003.H04F000328 ITEC AWB Wheat Meiotic Stage Library Triticum
aestivum cDNA clone AWB003.H04, mRNA sequence
Length = 401
Score = 129 bits (277), Expect = 2e-029
Identities = 52/63 (82%), Positives = 55/63 (87%)
Frame = -1 / -3
Query: 530 VVRTLRKSFPGYPVPERCSDEVNPRKQPYKISNQRLRELGLEFTPAAQALYDTVVCFQEK 351
VV LRK FP YP+P RCSDEVNPRKQPYK+SNQRLRELGLEFTP AQ LYDTVV FQEK
Sbjct: 399 VVTILRKFFPEYPIPSRCSDEVNPRKQPYKMSNQRLRELGLEFTPVAQCLYDTVVSFQEK 220
Query: 350 GIL 342
G+L
Sbjct: 219 GVL 211
Score = 103 bits (220), Expect = 2e-021
Identities = 43/57 (75%), Positives = 45/57 (78%)
Frame = +1 / +2
Query: 343 RMPFSWKHTTVSYSACAAGVNSRPSSLSRWLEILYGCFLGFTSSEHLSGTG*PGKDL 513
R PFSWK TTVS CA GVNSRPSS SRW +ILYGCFLGFTSSEHL G G GK+L
Sbjct: 212 RTPFSWKLTTVS*RHCATGVNSRPSSRSRWFDILYGCFLGFTSSEHLLGMGYSGKNL 382
>gb|CA701379.1|CA701379 wkm2c.pk005.p10 wkm2c Triticum aestivum cDNA clone wkm2c.pk005.p10
5' end, mRNA sequence
Length = 556
Score = 128 bits (275), Expect = 4e-029
Identities = 51/79 (64%), Positives = 62/79 (78%)
Frame = -1 / +3
Query: 578 AAGRYICADAVLHREDVVRTLRKSFPGYPVPERCSDEVNPRKQPYKISNQRLRELGLEFT 399
A+GR++CA+ VLHREDVV L K FP YPVP RCSDEVNPRKQPY +SN +L++LGL+FT
Sbjct: 246 ASGRHLCAERVLHREDVVHILAKLFPEYPVPTRCSDEVNPRKQPYXMSNHKLQDLGLQFT 425
Query: 398 PAAQALYDTVVCFQEKGIL 342
P +LY+TV EKG L
Sbjct: 426 PVNDSLYETVNSLXEKGQL 482
>gb|CA638309.1|CA638309 wre1n.pk0008.d2 wre1n Triticum aestivum cDNA clone wre1n.pk0008.d2
5' end, mRNA sequence
Length = 593
Score = 123 bits (264), Expect = 1e-027
Identities = 50/72 (69%), Positives = 58/72 (80%)
Frame = -1 / +1
Query: 557 ADAVLHREDVVRTLRKSFPGYPVPERCSDEVNPRKQPYKISNQRLRELGLEFTPAAQALY 378
A+ VLHREDVV L K FP YPVP RCSDEVNPRKQPYK+SNQ+L++LGL+FTP +LY
Sbjct: 1 AERVLHREDVVHILAKLFPEYPVPTRCSDEVNPRKQPYKMSNQKLQDLGLQFTPVNDSLY 180
Query: 377 DTVVCFQEKGIL 342
+TV QEKG L
Sbjct: 181 ETVKSLQEKGHL 216
>gb|CV759318.1|CV759318 FGAS053701 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 811
Score = 121 bits (259), Expect = 6e-027
Identities = 49/71 (69%), Positives = 57/71 (80%)
Frame = -1 / +1
Query: 554 DAVLHREDVVRTLRKSFPGYPVPERCSDEVNPRKQPYKISNQRLRELGLEFTPAAQALYD 375
+ VLHREDVV L K FP YPVP RCSDEVNPRKQPYK+SNQ+L++LGL+FTP +LY+
Sbjct: 121 ERVLHREDVVHILGKLFPEYPVPTRCSDEVNPRKQPYKMSNQKLQDLGLQFTPVNDSLYE 300
Query: 374 TVVCFQEKGIL 342
TV QEKG L
Sbjct: 301 TVKSLQEKGHL 333
>gb|CN008270.1|CN008270 WHE2639_C08_F15ZE Wheat Fusarium graminearum infected spike cDNA
library Triticum aestivum cDNA clone WHE2639_C08_F15,
mRNA sequence
Length = 493
Score = 115 bits (246), Expect = 4e-025
Identities = 47/57 (82%), Positives = 49/57 (85%)
Frame = -1 / +3
Query: 551 AVLHREDVVRTLRKSFPGYPVPERCSDEVNPRKQPYKISNQRLRELGLEFTPAAQAL 381
AVLHREDVV LRK FP Y +P RCSDEVNPRKQPYK+SNQRLRELGLEFTP AQ L
Sbjct: 321 AVLHREDVVTILRKFFPEYSIPSRCSDEVNPRKQPYKMSNQRLRELGLEFTPVAQCL 491
>gb|BE403213.1|BE403213 WHE0426_G02_M04ZS Wheat etiolated seedling root cDNA library
Triticum aestivum cDNA clone WHE0426_G02_M04, mRNA
sequence
Length = 212
Score = 115 bits (245), Expect = 5e-025
Identities = 44/61 (72%), Positives = 52/61 (85%)
Frame = -1 / +3
Query: 578 AAGRYICADAVLHREDVVRTLRKSFPGYPVPERCSDEVNPRKQPYKISNQRLRELGLEFT 399
A+GRY+CA+ VLHREDVV L K FP YPVP RCSDEVNP KQPYK+SN +L++LGL+FT
Sbjct: 21 ASGRYLCAERVLHREDVVHILAKLFPEYPVPTRCSDEVNPWKQPYKMSNHKLQDLGLQFT 200
Query: 398 P 396
P
Sbjct: 201 P 203
>gb|CA731337.1|CA731337 wip1c.pk006.p20 wip1c Triticum aestivum cDNA clone wip1c.pk006.p20
5' end, mRNA sequence
Length = 637
Score = 106 bits (227), Expect = 2e-022
Identities = 43/79 (54%), Positives = 53/79 (67%)
Frame = -1 / +2
Query: 578 AAGRYICADAVLHREDVVRTLRKSFPGYPVPERCSDEVNPRKQPYKISNQRLRELGLEFT 399
A GRY+C AVLHR ++ L FP Y + +C D+ P +PYK SN RLRELGLEFT
Sbjct: 254 ARGRYLCIGAVLHRAHFLQLLGDLFPQYHITAKCEDDGKPTAKPYKFSNLRLRELGLEFT 433
Query: 398 PAAQALYDTVVCFQEKGIL 342
P Q+LY+TV C Q+KG L
Sbjct: 434 PLRQSLYETVTCLQKKGHL 490
>gb|BQ169888.1|BQ169888 WHE0976_E11_I22ZT Wheat pre-anthesis spike cDNA library Triticum
aestivum cDNA clone WHE0976_E11_I22, mRNA sequence
Length = 614
Score = 105 bits (223), Expect = 6e-022
Identities = 39/76 (51%), Positives = 53/76 (69%)
Frame = -1 / -2
Query: 569 RYICADAVLHREDVVRTLRKSFPGYPVPERCSDEVNPRKQPYKISNQRLRELGLEFTPAA 390
RY+CA+ LHR ++ R L FP YP+P RC DEVNP K+ YK +NQ L++LG++FTP
Sbjct: 547 RYVCAERTLHRGELCRILAGLFPEYPIPTRCKDEVNPPKKGYKYTNQPLKDLGIKFTPVQ 368
Query: 389 QALYDTVVCFQEKGIL 342
+ LY+ V QEKG +
Sbjct: 367 EYLYEAVKSLQEKGFI 320
>gb|CD878802.1|CD878802 AZO4.103K12R011122 AZO4 Triticum aestivum cDNA clone AZO4103K12,
mRNA sequence
Length = 644
Score = 105 bits (223), Expect = 6e-022
Identities = 43/79 (54%), Positives = 52/79 (65%)
Frame = -1 / -1
Query: 578 AAGRYICADAVLHREDVVRTLRKSFPGYPVPERCSDEVNPRKQPYKISNQRLRELGLEFT 399
A GRY+C AVLHR + L FP Y + +C D+ P +PYK SN RLRELGLEFT
Sbjct: 476 AHGRYLCIGAVLHRAYFLELLGDLFPQYHITAKCEDDGKPMAKPYKFSNLRLRELGLEFT 297
Query: 398 PAAQALYDTVVCFQEKGIL 342
P Q+LY+TV C Q+KG L
Sbjct: 296 PLRQSLYETVTCLQKKGHL 240
>gb|CD935432.1|CD935432 OV.101I12R010424 OV Triticum aestivum cDNA clone OV101I12, mRNA
sequence
Length = 671
Score = 105 bits (223), Expect = 6e-022
Identities = 39/76 (51%), Positives = 53/76 (69%)
Frame = -1 / -3
Query: 569 RYICADAVLHREDVVRTLRKSFPGYPVPERCSDEVNPRKQPYKISNQRLRELGLEFTPAA 390
RY+CA+ LHR ++ R L FP YP+P RC DEVNP K+ YK +NQ L++LG++FTP
Sbjct: 513 RYVCAERTLHRGELCRILAGLFPEYPIPTRCKDEVNPPKKGYKYTNQPLKDLGIKFTPVQ 334
Query: 389 QALYDTVVCFQEKGIL 342
+ LY+ V QEKG +
Sbjct: 333 EYLYEAVKSLQEKGFI 286
>gb|CD454939.1|CD454939 WHE2013_A04_A07ZT CS wheat drought stressed leaf cDNA library
Triticum aestivum cDNA clone WHE2013_A04_A07, mRNA
sequence
Length = 565
Score = 103 bits (219), Expect = 2e-021
Identities = 40/56 (71%), Positives = 47/56 (83%)
Frame = -1 / -2
Query: 509 SFPGYPVPERCSDEVNPRKQPYKISNQRLRELGLEFTPAAQALYDTVVCFQEKGIL 342
SFP YPVP RCSDEVNPRKQPYK+SNQ+L++LGL+FTP +LY+TV QEKG L
Sbjct: 489 SFPEYPVPTRCSDEVNPRKQPYKMSNQKLQDLGLQFTPVKDSLYETVKSLQEKGHL 322
>gb|BJ278739.1|BJ278739 BJ278739 Y. Ogihara unpublished cDNA library, Wh_r Triticum
aestivum cDNA clone whr17i23 5', mRNA sequence
Length = 702
Score = 101 bits (215), Expect = 7e-021
Identities = 39/68 (57%), Positives = 50/68 (73%)
Frame = -1 / +3
Query: 545 LHREDVVRTLRKSFPGYPVPERCSDEVNPRKQPYKISNQRLRELGLEFTPAAQALYDTVV 366
LHR D+ R L K FP YPVP +C DEVNP + YK +NQRL++LG+EF P Q++Y+TV
Sbjct: 246 LHRGDLCRVLGKLFPEYPVPTKCKDEVNPPVKGYKFTNQRLKDLGMEFVPVLQSIYETVK 425
Query: 365 CFQEKGIL 342
QEKG+L
Sbjct: 426 SLQEKGML 449
>gb|BJ283791.1|BJ283791 BJ283791 Y. Ogihara unpublished cDNA library, Wh_r Triticum
aestivum cDNA clone whr17i23 3', mRNA sequence
Length = 724
Score = 101 bits (215), Expect = 7e-021
Identities = 39/68 (57%), Positives = 50/68 (73%)
Frame = -1 / -3
Query: 545 LHREDVVRTLRKSFPGYPVPERCSDEVNPRKQPYKISNQRLRELGLEFTPAAQALYDTVV 366
LHR D+ R L K FP YPVP +C DEVNP + YK +NQRL++LG+EF P Q++Y+TV
Sbjct: 491 LHRGDLCRVLGKLFPEYPVPTKCKDEVNPPVKGYKFTNQRLKDLGMEFVPVLQSIYETVK 312
Query: 365 CFQEKGIL 342
QEKG+L
Sbjct: 311 SLQEKGML 288
>gb|BQ788904.1|BQ788904 WHE4155_B07_C13ZS Wheat CS whole plant cDNA library Triticum
aestivum cDNA clone WHE4155_B07_C13, mRNA sequence
Length = 630
Score = 101 bits (215), Expect = 7e-021
Identities = 39/68 (57%), Positives = 50/68 (73%)
Frame = -1 / +2
Query: 545 LHREDVVRTLRKSFPGYPVPERCSDEVNPRKQPYKISNQRLRELGLEFTPAAQALYDTVV 366
LHR D+ R L K FP YPVP +C DEVNP + YK +NQRL++LG+EF P Q++Y+TV
Sbjct: 83 LHRGDLCRVLGKLFPEYPVPTKCKDEVNPPVKGYKFTNQRLKDLGMEFVPVLQSIYETVK 262
Query: 365 CFQEKGIL 342
QEKG+L
Sbjct: 263 SLQEKGML 286
Database: Triticum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 3:01 PM
Number of letters in database: 367,240,239
Number of sequences in database: 636,343
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 482,005,600
Number of Sequences: 636343
Number of extensions: 7478292
Number of successful extensions: 146466
Number of sequences better than 1.0e-020: 29
length of database: 122,413,413
effective HSP length: 52
effective length of database: 89,323,577
effective search space used: 12594624357
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)