TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2621786.2.1
(623 letters)
Database: Triticum_nucl_with_EST.fasta
636,343 sequences; 367,240,239 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BJ307988.1|BJ307988 BJ307988 Y. Ogihara unpublished cDNA... 272 4e-073
gb|CD877306.1|CD877306 AZO4.100A13R011121 AZO4 Triticum aes... 271 5e-073
gb|CK151644.1|CK151644 FGAS034295 Triticum aestivum FGAS: T... 269 1e-072
gb|BJ298930.1|BJ298930 BJ298930 Y. Ogihara unpublished cDNA... 244 5e-064
gb|BJ302166.1|BJ302166 BJ302166 Y. Ogihara unpublished cDNA... 229 3e-059
gb|BJ297825.1|BJ297825 BJ297825 Y. Ogihara unpublished cDNA... 216 2e-055
gb|BJ292445.1|BJ292445 BJ292445 Y. Ogihara unpublished cDNA... 107 9e-053
gb|BE492817.1|BE492817 WHE0565_C03_C03ZE Triticum monococcu... 204 1e-051
gb|BJ291215.1|BJ291215 BJ291215 Y. Ogihara unpublished cDNA... 199 1e-051
gb|BJ292682.1|BJ292682 BJ292682 Y. Ogihara unpublished cDNA... 201 5e-051
gb|CD875955.1|CD875955 AZO3.108A09R011126 AZO3 Triticum aes... 180 8e-049
gb|CA688042.1|CA688042 wlm96.pk037.o19 wlm96 Triticum aesti... 189 3e-047
gb|BJ249218.1|BJ249218 BJ249218 Y. Ogihara unpublished cDNA... 171 6e-042
gb|BJ299121.1|BJ299121 BJ299121 Y. Ogihara unpublished cDNA... 166 2e-040
gb|BJ220822.1|BJ220822 BJ220822 Y. Ogihara unpublished cDNA... 131 6e-030
gb|CA681031.1|CA681031 wlm24.pk0022.g2 wlm24 Triticum aesti... 103 4e-025
gb|BJ255477.1|BJ255477 BJ255477 Y. Ogihara unpublished cDNA... 99 5e-022
>gb|BJ307988.1|BJ307988 BJ307988 Y. Ogihara unpublished cDNA library, Wh_yd Triticum
aestivum cDNA clone whyd13o18 3', mRNA sequence
Length = 673
Score = 272 bits (588), Expect(2) = 4e-073
Identities = 109/131 (83%), Positives = 123/131 (93%)
Frame = +2 / -2
Query: 2 SSARDWGFAGDYVEAMWLMLQQEQPGDYVVATEESHTVEEFLQAAFGYAGLSWKDHVVID 181
S+ARDWGFAGDYVEAMWLMLQQ++P DYVVATEE HTVEEFLQAAFGYAGL+WKDHVVID
Sbjct: 600 SAARDWGFAGDYVEAMWLMLQQDKPDDYVVATEECHTVEEFLQAAFGYAGLNWKDHVVID 421
Query: 182 KKYFRPAEVDSLKGDATKARKVLKWKPKVGFQELVEMMVDHDIELAKKEKVLVDAGFRDP 361
KKYFRP+EVD L+GD++K+R+VL WKPKVGFQ+LVEMMVD+DIELAKKEKVLVDAG+RDP
Sbjct: 420 KKYFRPSEVDCLQGDSSKSRRVLGWKPKVGFQQLVEMMVDNDIELAKKEKVLVDAGYRDP 241
Query: 362 KQQP*KHHSCF 394
KQQP* + F
Sbjct: 240 KQQP*NWYQ*F 208
Score = 204 bits (441), Expect = 5e-052
Identities = 92/126 (73%), Positives = 95/126 (75%)
Frame = -3 / +2
Query: 378 FYGCCLGSRNPASTRTFSFLAXXXXXXXXXXXXSWNPTLGFHLSTFLALVASPLRLSTSA 199
FYGCCLGSR PASTRTFSFLA W PTLGFH ST L L SP R STS
Sbjct: 224 FYGCCLGSRYPASTRTFSFLASSMSLSTIISTSCWKPTLGFHPSTLLDLDESP*RQSTSE 403
Query: 198 GRKYFLSMTT*SFQLRPA*PKAACRNSSTVWDSSVATT*SPGCSCCSMSHIAST*SPANP 19
GRKYFLS+TT*SFQLRPA PKAAC+NSSTVW SSVATT*S G SC SMSH+AST*SPA P
Sbjct: 404 GRKYFLSITT*SFQLRPAYPKAACKNSSTVWHSSVATT*SSGLSCWSMSHMAST*SPAKP 583
Query: 18 QSRADE 1
QS A E
Sbjct: 584 QSLAAE 601
Score = 112 bits (239), Expect = 4e-024
Identities = 55/84 (65%), Positives = 57/84 (67%)
Frame = +1 / -1
Query: 127 AGCLRLRRPQLEGSRGH*QEVLPACRSRQPQGGRHQGEEGAQVEAQGWVPGARGDDGRSR 306
AG +RRPQLEGS G *QEVL A P GG Q EE A VEAQGW+P A DDG R
Sbjct: 475 AGRFWVRRPQLEGSCGD*QEVLSAFGGGLPSGGFIQVEESAWVEAQGWLPAAG*DDG**R 296
Query: 307 H*ARQEGEGSGGCWVP*SQAAAIE 378
H ARQEGEG GCWVP QAAAIE
Sbjct: 295 HRARQEGEGPCGCWVPRPQAAAIE 224
Score = 74.8 bits (157), Expect(2) = 3e-027
Identities = 34/66 (51%), Positives = 42/66 (63%)
Frame = -2 / +1
Query: 238 RLGGVPLEAVDFCRPEVLLVNDHVILPAEAGVAEGSLQEXXXXXXXXXXXXVIPRLFLLQ 59
RLG +PL+AV RP+VLLVN H+ILP EAGV + LQE ++ RL LL+
Sbjct: 364 RLG*IPLKAVHLRRPKVLLVNHHMILPVEAGVPKSGLQELLHGVALLGGDDIVVRLVLLE 543
Query: 58 HEPHCL 41
HEPH L
Sbjct: 544 HEPHGL 561
Score = 67.5 bits (141), Expect(2) = 3e-027
Identities = 26/37 (70%), Positives = 29/37 (78%)
Frame = -1 / +3
Query: 377 SMAAAWDHGTQHPPEPSPSWRAQCRDRPSSPRAPGTQ 267
SMAAAW GTQHP PSPSWRA+CR +PSS A G+Q
Sbjct: 225 SMAAAWGRGTQHPQGPSPSWRARCRYQPSSQPAAGSQ 335
Score = 23.5 bits (45), Expect(2) = 4e-073
Identities = 8/11 (72%), Positives = 10/11 (90%)
Frame = +1 / -1
Query: 493 RNKDCCSMILQ 525
RNK+ CS+ILQ
Sbjct: 106 RNKEVCSLILQ 74
>gb|CD877306.1|CD877306 AZO4.100A13R011121 AZO4 Triticum aestivum cDNA clone AZO4100A13,
mRNA sequence
Length = 666
Score = 271 bits (587), Expect(2) = 5e-073
Identities = 109/131 (83%), Positives = 123/131 (93%)
Frame = +2 / -2
Query: 2 SSARDWGFAGDYVEAMWLMLQQEQPGDYVVATEESHTVEEFLQAAFGYAGLSWKDHVVID 181
S+ARDWGFAGDYVEAMWLMLQQ++P DYVVATEE HTVEEFLQAAFGYAGL+WKDHVVID
Sbjct: 593 SAARDWGFAGDYVEAMWLMLQQDKPDDYVVATEECHTVEEFLQAAFGYAGLNWKDHVVID 414
Query: 182 KKYFRPAEVDSLKGDATKARKVLKWKPKVGFQELVEMMVDHDIELAKKEKVLVDAGFRDP 361
KKYFRP+EVD L+GD++K+R+VL WKPKVGFQ+LVEMMVD+DIELAKKEKVLVDAG+RDP
Sbjct: 413 KKYFRPSEVDCLQGDSSKSRRVLGWKPKVGFQQLVEMMVDNDIELAKKEKVLVDAGYRDP 234
Query: 362 KQQP*KHHSCF 394
KQQP* + F
Sbjct: 233 KQQP*SWNQ*F 201
Score = 205 bits (442), Expect = 4e-052
Identities = 92/125 (73%), Positives = 94/125 (75%)
Frame = -3 / +1
Query: 375 YGCCLGSRNPASTRTFSFLAXXXXXXXXXXXXSWNPTLGFHLSTFLALVASPLRLSTSAG 196
YGCCLGSR PASTRTFSFLA W PTLGFH ST L L SP R STS G
Sbjct: 220 YGCCLGSRYPASTRTFSFLASSMSLSTIISTSCWKPTLGFHPSTLLDLDESPCRQSTSEG 399
Query: 195 RKYFLSMTT*SFQLRPA*PKAACRNSSTVWDSSVATT*SPGCSCCSMSHIAST*SPANPQ 16
RKYFLSMTT*SFQLRPA PKAAC+NSSTVW SSVATT*S G SC SMSH+AST*SPA PQ
Sbjct: 400 RKYFLSMTT*SFQLRPAYPKAACKNSSTVWHSSVATT*SSGLSCWSMSHMAST*SPAKPQ 579
Query: 15 SRADE 1
S A E
Sbjct: 580 SLAAE 594
Score = 106 bits (227), Expect = 2e-022
Identities = 52/84 (61%), Positives = 55/84 (65%)
Frame = +1 / -1
Query: 127 AGCLRLRRPQLEGSRGH*QEVLPACRSRQPQGGRHQGEEGAQVEAQGWVPGARGDDGRSR 306
AGC + RPQLEGS GH*QEVL P G Q +E A VEAQGW+P A DDG R
Sbjct: 468 AGCFWVCRPQLEGSCGH*QEVLSPFGGGLPAGRFIQVKESAWVEAQGWLPAAS*DDG**R 289
Query: 307 H*ARQEGEGSGGCWVP*SQAAAIE 378
H A QEGEG GCWVP QAAAIE
Sbjct: 288 HRACQEGEGPCGCWVPRPQAAAIE 217
Score = 71.2 bits (149), Expect(3) = 4e-026
Identities = 33/66 (50%), Positives = 42/66 (63%)
Frame = -2 / +3
Query: 235 LGGVPLEAVDFCRPEVLLVNDHVILPAEAGVAEGSLQEXXXXXXXXXXXXVIPRLFLLQH 56
LG + L+AV R +VLLVNDH+ILP EAG+ + SLQE +I RL LL+H
Sbjct: 360 LG*ISLQAVHLRRAKVLLVNDHMILPVEAGIPKSSLQELLHGVALFSGDNIIIRLVLLEH 539
Query: 55 EPHCLD 38
EPH L+
Sbjct: 540 EPHGLN 557
Score = 65.7 bits (137), Expect(3) = 4e-026
Identities = 25/37 (67%), Positives = 29/37 (78%)
Frame = -1 / +2
Query: 377 SMAAAWDHGTQHPPEPSPSWRAQCRDRPSSPRAPGTQ 267
SMAAAW GTQHP PSPSW+A+CR +PSS A G+Q
Sbjct: 218 SMAAAWGRGTQHPQGPSPSWQARCRYQPSSQLAAGSQ 328
Score = 25.4 bits (49), Expect(2) = 5e-073
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = +2 / -2
Query: 542 SDYVMCFNRMNE 577
S YVMCF+ MNE
Sbjct: 53 SYYVMCFSHMNE 18
Score = 21.7 bits (41), Expect(3) = 4e-026
Identities = 8/12 (66%), Positives = 11/12 (91%)
Frame = -1 / +2
Query: 581 IIHSFD*ST*HS 546
+IHS++ ST*HS
Sbjct: 14 LIHSYEKST*HS 49
>gb|CK151644.1|CK151644 FGAS034295 Triticum aestivum FGAS: TaLt3 Triticum aestivum cDNA,
mRNA sequence
Length = 858
Score = 269 bits (581), Expect(2) = 1e-072
Identities = 108/131 (82%), Positives = 122/131 (93%)
Frame = +2 / -1
Query: 2 SSARDWGFAGDYVEAMWLMLQQEQPGDYVVATEESHTVEEFLQAAFGYAGLSWKDHVVID 181
S+ARDWGFAG YVEAMWLMLQQ++P DYVVATEE HTVEEFLQAAFGYAGL+WKDHVVID
Sbjct: 780 SAARDWGFAGGYVEAMWLMLQQDKPDDYVVATEECHTVEEFLQAAFGYAGLNWKDHVVID 601
Query: 182 KKYFRPAEVDSLKGDATKARKVLKWKPKVGFQELVEMMVDHDIELAKKEKVLVDAGFRDP 361
KKYFRP+EVD L+GD++K+R+VL WKPKVGFQ+LVEMMVD+DIELAKKEKVLVDAG+RDP
Sbjct: 600 KKYFRPSEVDCLQGDSSKSRRVLGWKPKVGFQQLVEMMVDNDIELAKKEKVLVDAGYRDP 421
Query: 362 KQQP*KHHSCF 394
KQQP* + F
Sbjct: 420 KQQP*NWYQ*F 388
Score = 200 bits (431), Expect = 1e-050
Identities = 90/126 (71%), Positives = 93/126 (73%)
Frame = -3 / +2
Query: 378 FYGCCLGSRNPASTRTFSFLAXXXXXXXXXXXXSWNPTLGFHLSTFLALVASPLRLSTSA 199
FYGCCLGSR PASTRTFSFLA W PTLGFH ST L L SP R STS
Sbjct: 404 FYGCCLGSRYPASTRTFSFLASSMSLSTIISTSCWKPTLGFHPSTLLDLDESP*RQSTSE 583
Query: 198 GRKYFLSMTT*SFQLRPA*PKAACRNSSTVWDSSVATT*SPGCSCCSMSHIAST*SPANP 19
GRKYFLS+TT*SFQLRPA PKAAC+NSSTVW SSVATT*S G SC SMSH+AST PA P
Sbjct: 584 GRKYFLSITT*SFQLRPAYPKAACKNSSTVWHSSVATT*SSGLSCWSMSHMASTYPPAKP 763
Query: 18 QSRADE 1
QS A E
Sbjct: 764 QSLAAE 781
Score = 112 bits (239), Expect = 4e-024
Identities = 55/84 (65%), Positives = 57/84 (67%)
Frame = +1 / -3
Query: 127 AGCLRLRRPQLEGSRGH*QEVLPACRSRQPQGGRHQGEEGAQVEAQGWVPGARGDDGRSR 306
AG +RRPQLEGS G *QEVL A P GG Q EE A VEAQGW+P A DDG R
Sbjct: 655 AGRFWVRRPQLEGSCGD*QEVLSAFGGGLPSGGFIQVEESAWVEAQGWLPAAG*DDG**R 476
Query: 307 H*ARQEGEGSGGCWVP*SQAAAIE 378
H ARQEGEG GCWVP QAAAIE
Sbjct: 475 HRARQEGEGPCGCWVPRPQAAAIE 404
Score = 74.8 bits (157), Expect(2) = 3e-027
Identities = 34/66 (51%), Positives = 42/66 (63%)
Frame = -2 / +1
Query: 238 RLGGVPLEAVDFCRPEVLLVNDHVILPAEAGVAEGSLQEXXXXXXXXXXXXVIPRLFLLQ 59
RLG +PL+AV RP+VLLVN H+ILP EAGV + LQE ++ RL LL+
Sbjct: 544 RLG*IPLKAVHLRRPKVLLVNHHMILPVEAGVPKSGLQELLHGVALLGGDDIVVRLVLLE 723
Query: 58 HEPHCL 41
HEPH L
Sbjct: 724 HEPHGL 741
Score = 67.5 bits (141), Expect(2) = 3e-027
Identities = 26/37 (70%), Positives = 29/37 (78%)
Frame = -1 / +3
Query: 377 SMAAAWDHGTQHPPEPSPSWRAQCRDRPSSPRAPGTQ 267
SMAAAW GTQHP PSPSWRA+CR +PSS A G+Q
Sbjct: 405 SMAAAWGRGTQHPQGPSPSWRARCRYQPSSQPAAGSQ 515
Score = 25.4 bits (49), Expect(2) = 1e-072
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +1 / -3
Query: 493 RNKDCCSMILQCVHLLF*LCYVL*SNE 573
RNK+ CS+ILQ L + + Y NE
Sbjct: 286 RNKEVCSLILQYR*LSYYVAYFYHMNE 206
>gb|BJ298930.1|BJ298930 BJ298930 Y. Ogihara unpublished cDNA library, Wh_SL Triticum
aestivum cDNA clone whsl27m07 3', mRNA sequence
Length = 551
Score = 244 bits (528), Expect = 5e-064
Identities = 99/120 (82%), Positives = 112/120 (93%)
Frame = +2 / -3
Query: 35 YVEAMWLMLQQEQPGDYVVATEESHTVEEFLQAAFGYAGLSWKDHVVIDKKYFRPAEVDS 214
YVEAMWLMLQQ++P DYVVATEE HTVEEFLQAAFGYAGL+WKDHVVIDKKYFRP+EVD
Sbjct: 549 YVEAMWLMLQQDKPDDYVVATEECHTVEEFLQAAFGYAGLNWKDHVVIDKKYFRPSEVDC 370
Query: 215 LKGDATKARKVLKWKPKVGFQELVEMMVDHDIELAKKEKVLVDAGFRDPKQQP*KHHSCF 394
L+GD++K+R+VL WKPKVGFQ+LVEMMVD+DIELAKKEKVLVDAG+RDPKQQP* + F
Sbjct: 369 LQGDSSKSRRVLGWKPKVGFQQLVEMMVDNDIELAKKEKVLVDAGYRDPKQQP*SWNQ*F 190
Score = 188 bits (406), Expect = 4e-047
Identities = 84/114 (73%), Positives = 86/114 (75%)
Frame = -3 / +2
Query: 375 YGCCLGSRNPASTRTFSFLAXXXXXXXXXXXXSWNPTLGFHLSTFLALVASPLRLSTSAG 196
YGCCLGSR PASTRTFSFLA W PTLGFH ST L L SP R STS G
Sbjct: 209 YGCCLGSRYPASTRTFSFLASSMSLSTIISTSCWKPTLGFHPSTLLDLDESPCRQSTSEG 388
Query: 195 RKYFLSMTT*SFQLRPA*PKAACRNSSTVWDSSVATT*SPGCSCCSMSHIAST* 34
RKYFLSMTT*SFQLRPA PKAAC+NSSTVW SSVATT*S G SC SMSH+AST*
Sbjct: 389 RKYFLSMTT*SFQLRPAYPKAACKNSSTVWHSSVATT*SSGLSCWSMSHMAST* 550
Score = 106 bits (227), Expect = 2e-022
Identities = 52/84 (61%), Positives = 55/84 (65%)
Frame = +1 / -2
Query: 127 AGCLRLRRPQLEGSRGH*QEVLPACRSRQPQGGRHQGEEGAQVEAQGWVPGARGDDGRSR 306
AGC + RPQLEGS GH*QEVL P G Q +E A VEAQGW+P A DDG R
Sbjct: 457 AGCFWVCRPQLEGSCGH*QEVLSPFGGGLPAGRFIQVKESAWVEAQGWLPAAS*DDG**R 278
Query: 307 H*ARQEGEGSGGCWVP*SQAAAIE 378
H A QEGEG GCWVP QAAAIE
Sbjct: 277 HRACQEGEGPCGCWVPRPQAAAIE 206
Score = 71.2 bits (149), Expect(2) = 1e-025
Identities = 33/66 (50%), Positives = 42/66 (63%)
Frame = -2 / +1
Query: 235 LGGVPLEAVDFCRPEVLLVNDHVILPAEAGVAEGSLQEXXXXXXXXXXXXVIPRLFLLQH 56
LG + L+AV R +VLLVNDH+ILP EAG+ + SLQE +I RL LL+H
Sbjct: 349 LG*ISLQAVHLRRAKVLLVNDHMILPVEAGIPKSSLQELLHGVALFSGDNIIIRLVLLEH 528
Query: 55 EPHCLD 38
EPH L+
Sbjct: 529 EPHGLN 546
Score = 65.7 bits (137), Expect(2) = 1e-025
Identities = 25/37 (67%), Positives = 29/37 (78%)
Frame = -1 / +3
Query: 377 SMAAAWDHGTQHPPEPSPSWRAQCRDRPSSPRAPGTQ 267
SMAAAW GTQHP PSPSW+A+CR +PSS A G+Q
Sbjct: 207 SMAAAWGRGTQHPQGPSPSWQARCRYQPSSQLAAGSQ 317
>gb|BJ302166.1|BJ302166 BJ302166 Y. Ogihara unpublished cDNA library, Wh_yd Triticum
aestivum cDNA clone whyd13o18 5', mRNA sequence
Length = 608
Score = 229 bits (494), Expect = 3e-059
Identities = 90/106 (84%), Positives = 102/106 (96%)
Frame = +2 / +2
Query: 2 SSARDWGFAGDYVEAMWLMLQQEQPGDYVVATEESHTVEEFLQAAFGYAGLSWKDHVVID 181
S+ARDWGFAGDYVEAMWLMLQQ++P DYVVATEE HTVEEFLQAAFGYAGL+WKDHVVID
Sbjct: 290 SAARDWGFAGDYVEAMWLMLQQDKPDDYVVATEECHTVEEFLQAAFGYAGLNWKDHVVID 469
Query: 182 KKYFRPAEVDSLKGDATKARKVLKWKPKVGFQELVEMMVDHDIELA 319
KKYFRP+EVD L+GD++K+R+VL WKPKVGFQ+LVEMMVD+DIELA
Sbjct: 470 KKYFRPSEVDCLQGDSSKSRRVLGWKPKVGFQQLVEMMVDNDIELA 607
Score = 158 bits (339), Expect(2) = 5e-041
Identities = 72/92 (78%), Positives = 75/92 (81%)
Frame = -3 / -3
Query: 276 WNPTLGFHLSTFLALVASPLRLSTSAGRKYFLSMTT*SFQLRPA*PKAACRNSSTVWDSS 97
W PTLGFH ST L L SP R STS GRKYFLS+TT*SFQLRPA PKAAC+NSSTVW SS
Sbjct: 564 WKPTLGFHPSTLLDLDESP*RQSTSEGRKYFLSITT*SFQLRPAYPKAACKNSSTVWHSS 385
Query: 96 VATT*SPGCSCCSMSHIAST*SPANPQSRADE 1
VATT*S G SC SMSH+AST*SPA PQS A E
Sbjct: 384 VATT*SSGLSCWSMSHMAST*SPAKPQSLAAE 289
Score = 30.4 bits (60), Expect(2) = 5e-041
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = -1 / -1
Query: 320 WRAQCRDRPSSPRAPGTQ 267
WRA+CR +PSS A G+Q
Sbjct: 608 WRARCRYQPSSQPAAGSQ 555
>gb|BJ297825.1|BJ297825 BJ297825 Y. Ogihara unpublished cDNA library, Wh_SL Triticum
aestivum cDNA clone whsl22e05 3', mRNA sequence
Length = 512
Score = 216 bits (466), Expect = 2e-055
Identities = 88/107 (82%), Positives = 99/107 (92%)
Frame = +2 / -2
Query: 74 PGDYVVATEESHTVEEFLQAAFGYAGLSWKDHVVIDKKYFRPAEVDSLKGDATKARKVLK 253
P DYVVATEE HTVEEFLQAAFGYAGL+WKDHVVIDKKYFRP+EVD L+GD++K+R+VL
Sbjct: 511 PDDYVVATEECHTVEEFLQAAFGYAGLNWKDHVVIDKKYFRPSEVDCLQGDSSKSRRVLG 332
Query: 254 WKPKVGFQELVEMMVDHDIELAKKEKVLVDAGFRDPKQQP*KHHSCF 394
WKPKVGFQ+LVEMMVD+DIELAKKEKVLVDAG+RDPKQQP* + F
Sbjct: 331 WKPKVGFQQLVEMMVDNDIELAKKEKVLVDAGYRDPKQQP*SWNQ*F 191
Score = 167 bits (360), Expect = 8e-041
Identities = 74/101 (73%), Positives = 75/101 (74%)
Frame = -3 / +3
Query: 375 YGCCLGSRNPASTRTFSFLAXXXXXXXXXXXXSWNPTLGFHLSTFLALVASPLRLSTSAG 196
YGCCLGSR PASTRTFSFLA W PTLGFH ST L L SP R STS G
Sbjct: 210 YGCCLGSRYPASTRTFSFLASSMSLSTIISTSCWKPTLGFHPSTLLDLDESPCRQSTSEG 389
Query: 195 RKYFLSMTT*SFQLRPA*PKAACRNSSTVWDSSVATT*SPG 73
RKYFLSMTT*SFQLRPA PKAAC+NSSTVW SSVATT*S G
Sbjct: 390 RKYFLSMTT*SFQLRPAYPKAACKNSSTVWHSSVATT*SSG 512
Score = 106 bits (227), Expect = 2e-022
Identities = 52/84 (61%), Positives = 55/84 (65%)
Frame = +1 / -1
Query: 127 AGCLRLRRPQLEGSRGH*QEVLPACRSRQPQGGRHQGEEGAQVEAQGWVPGARGDDGRSR 306
AGC + RPQLEGS GH*QEVL P G Q +E A VEAQGW+P A DDG R
Sbjct: 458 AGCFWVCRPQLEGSCGH*QEVLSPFGGGLPAGRFIQVKESAWVEAQGWLPAAS*DDG**R 279
Query: 307 H*ARQEGEGSGGCWVP*SQAAAIE 378
H A QEGEG GCWVP QAAAIE
Sbjct: 278 HRACQEGEGPCGCWVPRPQAAAIE 207
Score = 65.7 bits (137), Expect(3) = 7e-023
Identities = 25/37 (67%), Positives = 29/37 (78%)
Frame = -1 / +1
Query: 377 SMAAAWDHGTQHPPEPSPSWRAQCRDRPSSPRAPGTQ 267
SMAAAW GTQHP PSPSW+A+CR +PSS A G+Q
Sbjct: 208 SMAAAWGRGTQHPQGPSPSWQARCRYQPSSQLAAGSQ 318
Score = 53.8 bits (111), Expect(3) = 7e-023
Identities = 23/38 (60%), Positives = 29/38 (76%)
Frame = -2 / +2
Query: 235 LGGVPLEAVDFCRPEVLLVNDHVILPAEAGVAEGSLQE 122
LG + L+AV R +VLLVNDH+ILP EAG+ + SLQE
Sbjct: 350 LG*ISLQAVHLRRAKVLLVNDHMILPVEAGIPKSSLQE 463
Score = 25.8 bits (50), Expect(3) = 7e-023
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = -1 / +1
Query: 128 AGTPRRCGTPQW 93
A TP RCGT QW
Sbjct: 457 ARTPPRCGTLQW 492
>gb|BJ292445.1|BJ292445 BJ292445 Y. Ogihara unpublished cDNA library, Wh_SL Triticum
aestivum cDNA clone whsl27m07 5', mRNA sequence
Length = 584
Score = 107 bits (228), Expect(5) = 9e-053
Identities = 44/57 (77%), Positives = 52/57 (91%)
Frame = +2 / +2
Query: 224 DATKARKVLKWKPKVGFQELVEMMVDHDIELAKKEKVLVDAGFRDPKQQP*KHHSCF 394
D++K+R+VL WKPKVGFQ+LVEMMVD+DIELAKKEKVLVDAG+RDPKQQP* + F
Sbjct: 212 DSSKSRRVLGWKPKVGFQQLVEMMVDNDIELAKKEKVLVDAGYRDPKQQP*SWNQ*F 382
Score = 81.3 bits (171), Expect(5) = 9e-053
Identities = 31/35 (88%), Positives = 34/35 (97%)
Frame = +2 / +1
Query: 119 EFLQAAFGYAGLSWKDHVVIDKKYFRPAEVDSLKG 223
EFLQAAFGYAGL+WKDHVVIDKKYFRP+EVD L+G
Sbjct: 106 EFLQAAFGYAGLNWKDHVVIDKKYFRPSEVDCLQG 210
Score = 75.3 bits (158), Expect(5) = 5e-037
Identities = 32/54 (59%), Positives = 33/54 (61%)
Frame = -3 / -3
Query: 375 YGCCLGSRNPASTRTFSFLAXXXXXXXXXXXXSWNPTLGFHLSTFLALVASPLR 214
YGCCLGSR PASTRTFSFLA W PTLGFH ST L L S L+
Sbjct: 363 YGCCLGSRYPASTRTFSFLASSMSLSTIISTSCWKPTLGFHPSTLLDLDESXLQ 202
Score = 69.8 bits (146), Expect(5) = 5e-037
Identities = 30/35 (85%), Positives = 31/35 (88%)
Frame = -3 / -1
Query: 222 PLRLSTSAGRKYFLSMTT*SFQLRPA*PKAACRNS 118
P R STS GRKYFLSMTT*SFQLRPA PKAAC+NS
Sbjct: 209 PCRQSTSEGRKYFLSMTT*SFQLRPAYPKAACKNS 105
Score = 65.7 bits (137), Expect(3) = 7e-021
Identities = 25/37 (67%), Positives = 29/37 (78%)
Frame = -1 / -1
Query: 377 SMAAAWDHGTQHPPEPSPSWRAQCRDRPSSPRAPGTQ 267
SMAAAW GTQHP PSPSW+A+CR +PSS A G+Q
Sbjct: 365 SMAAAWGRGTQHPQGPSPSWQARCRYQPSSQLAAGSQ 255
Score = 50.1 bits (103), Expect(3) = 7e-021
Identities = 21/33 (63%), Positives = 26/33 (78%)
Frame = -2 / -3
Query: 220 LEAVDFCRPEVLLVNDHVILPAEAGVAEGSLQE 122
L+AV R +VLLVNDH+ILP EAG+ + SLQE
Sbjct: 207 LQAVHLRRAKVLLVNDHMILPVEAGIPKSSLQE 109
Score = 34.1 bits (68), Expect(5) = 9e-053
Identities = 14/25 (56%), Positives = 16/25 (64%)
Frame = +2 / +3
Query: 65 QEQPGDYVVATEESHTVEEFLQAAF 139
+ +P DYVVATEE HTV L F
Sbjct: 51 RXKPDDYVVATEECHTVXGVLAGCF 125
Score = 34.1 bits (68), Expect(5) = 9e-053
Identities = 13/15 (86%), Positives = 13/15 (86%)
Frame = +2 / +2
Query: 29 GDYVEAMWLMLQQEQ 73
G YVEAMWLMLQQ Q
Sbjct: 14 GXYVEAMWLMLQQXQ 58
Score = 31.3 bits (62), Expect(5) = 5e-037
Identities = 14/22 (63%), Positives = 14/22 (63%)
Frame = -3 / -2
Query: 138 KAACRNSSTVWDSSVATT*SPG 73
K R TVW SSVATT*S G
Sbjct: 124 KQPARTPXTVWHSSVATT*SSG 59
Score = 29.9 bits (59), Expect(5) = 5e-037
Identities = 11/15 (73%), Positives = 12/15 (80%)
Frame = -3 / -3
Query: 72 CSCCSMSHIAST*SP 28
C C SMSH+AST* P
Sbjct: 57 CXCWSMSHMAST*XP 13
Score = 25.4 bits (49), Expect(5) = 9e-053
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = +2 / +2
Query: 542 SDYVMCFNRMNE 577
S YVMCF+ MNE
Sbjct: 530 SYYVMCFSHMNE 565
Score = 22.6 bits (43), Expect(3) = 7e-021
Identities = 8/12 (66%), Positives = 10/12 (83%)
Frame = -2 / -2
Query: 73 LFLLQHEPHCLD 38
L LL+HEPH L+
Sbjct: 58 LXLLEHEPHGLN 23
Score = 21.7 bits (41), Expect(5) = 5e-037
Identities = 8/12 (66%), Positives = 11/12 (91%)
Frame = -1 / -1
Query: 581 IIHSFD*ST*HS 546
+IHS++ ST*HS
Sbjct: 569 LIHSYEKST*HS 534
>gb|BE492817.1|BE492817 WHE0565_C03_C03ZE Triticum monococcum vegetative apex cDNA library
Triticum monococcum cDNA clone WHE0565_C03_C03, mRNA
sequence
Length = 525
Score = 204 bits (439), Expect = 1e-051
Identities = 83/101 (82%), Positives = 94/101 (93%)
Frame = +2 / +1
Query: 92 ATEESHTVEEFLQAAFGYAGLSWKDHVVIDKKYFRPAEVDSLKGDATKARKVLKWKPKVG 271
ATEE HTVEEFLQAAFGYAGL+WKDHVVIDKKYFRP+EVD L+GD++K+R+VL WKPKVG
Sbjct: 10 ATEECHTVEEFLQAAFGYAGLNWKDHVVIDKKYFRPSEVDCLQGDSSKSRRVLGWKPKVG 189
Query: 272 FQELVEMMVDHDIELAKKEKVLVDAGFRDPKQQP*KHHSCF 394
FQ+LVEMMVD+DIELAKKEKVLVDAG+RDPKQQP* + F
Sbjct: 190 FQQLVEMMVDNDIELAKKEKVLVDAGYRDPKQQP*SWNQ*F 312
Score = 159 bits (341), Expect = 3e-038
Identities = 69/95 (72%), Positives = 70/95 (73%)
Frame = -3 / -2
Query: 375 YGCCLGSRNPASTRTFSFLAXXXXXXXXXXXXSWNPTLGFHLSTFLALVASPLRLSTSAG 196
YGCCLGSR PASTRTFSFLA W PTLGFH ST L L SP R STS G
Sbjct: 293 YGCCLGSRYPASTRTFSFLASSMSLSTIISTSCWKPTLGFHPSTLLDLEESPCRQSTSEG 114
Query: 195 RKYFLSMTT*SFQLRPA*PKAACRNSSTVWDSSVA 91
RKYFLSMTT*SFQLRPA PKAAC+NSSTVW SSVA
Sbjct: 113 RKYFLSMTT*SFQLRPAYPKAACKNSSTVWHSSVA 9
Score = 115 bits (246), Expect = 4e-025
Identities = 54/84 (64%), Positives = 57/84 (67%)
Frame = +1 / +3
Query: 127 AGCLRLRRPQLEGSRGH*QEVLPACRSRQPQGGRHQGEEGAQVEAQGWVPGARGDDGRSR 306
AGC + RPQLEGS GH*QEVL P G Q EE A+VEAQGW+P A DDG R
Sbjct: 45 AGCFWVCRPQLEGSCGH*QEVLSPFGGGLPAGRFLQVEESARVEAQGWLPAAS*DDG*QR 224
Query: 307 H*ARQEGEGSGGCWVP*SQAAAIE 378
H ARQEGEG GCWVP QAAAIE
Sbjct: 225 HRARQEGEGPCGCWVPRPQAAAIE 296
Score = 67.5 bits (141), Expect(3) = 2e-025
Identities = 26/37 (70%), Positives = 29/37 (78%)
Frame = -1 / -3
Query: 377 SMAAAWDHGTQHPPEPSPSWRAQCRDRPSSPRAPGTQ 267
SMAAAW GTQHP PSPSWRA+CR +PSS A G+Q
Sbjct: 295 SMAAAWGRGTQHPQGPSPSWRARCRCQPSSQLAAGSQ 185
Score = 60.6 bits (126), Expect(3) = 2e-025
Identities = 25/39 (64%), Positives = 31/39 (79%)
Frame = -2 / -1
Query: 238 RLGGVPLEAVDFCRPEVLLVNDHVILPAEAGVAEGSLQE 122
RLGG+ L+AV R +VLLVNDH+ILP EAG+ + SLQE
Sbjct: 156 RLGGISLQAVHLRRAKVLLVNDHMILPVEAGIPKSSLQE 40
Score = 25.8 bits (50), Expect(3) = 2e-025
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = -1 / -3
Query: 128 AGTPRRCGTPQW 93
A TP RCGT QW
Sbjct: 46 ARTPPRCGTLQW 11
>gb|BJ291215.1|BJ291215 BJ291215 Y. Ogihara unpublished cDNA library, Wh_SL Triticum
aestivum cDNA clone whsl22e05 5', mRNA sequence
Length = 528
Score = 199 bits (430), Expect(2) = 1e-051
Identities = 81/99 (81%), Positives = 92/99 (92%)
Frame = +2 / +2
Query: 98 EESHTVEEFLQAAFGYAGLSWKDHVVIDKKYFRPAEVDSLKGDATKARKVLKWKPKVGFQ 277
EE HTVEEFLQAAFGYAGL+WKDHVVIDKKYFRP+EVD L+GD++K+R+VL WKPKVGFQ
Sbjct: 23 EECHTVEEFLQAAFGYAGLNWKDHVVIDKKYFRPSEVDCLQGDSSKSRRVLGWKPKVGFQ 202
Query: 278 ELVEMMVDHDIELAKKEKVLVDAGFRDPKQQP*KHHSCF 394
+LVEMMVD+DIELAKKEKVLVDAG+RDPKQQP* + F
Sbjct: 203 QLVEMMVDNDIELAKKEKVLVDAGYRDPKQQP*SWNQ*F 319
Score = 155 bits (332), Expect(2) = 4e-037
Identities = 67/93 (72%), Positives = 68/93 (73%)
Frame = -3 / -1
Query: 375 YGCCLGSRNPASTRTFSFLAXXXXXXXXXXXXSWNPTLGFHLSTFLALVASPLRLSTSAG 196
YGCCLGSR PASTRTFSFLA W PTLGFH ST L L SP R STS G
Sbjct: 300 YGCCLGSRYPASTRTFSFLASSMSLSTIISTSCWKPTLGFHPSTLLDLDESPCRQSTSEG 121
Query: 195 RKYFLSMTT*SFQLRPA*PKAACRNSSTVWDSS 97
RKYFLSMTT*SFQLRPA PKAAC+NSSTVW SS
Sbjct: 120 RKYFLSMTT*SFQLRPAYPKAACKNSSTVWHSS 22
Score = 106 bits (227), Expect = 2e-022
Identities = 52/84 (61%), Positives = 55/84 (65%)
Frame = +1 / +1
Query: 127 AGCLRLRRPQLEGSRGH*QEVLPACRSRQPQGGRHQGEEGAQVEAQGWVPGARGDDGRSR 306
AGC + RPQLEGS GH*QEVL P G Q +E A VEAQGW+P A DDG R
Sbjct: 52 AGCFWVCRPQLEGSCGH*QEVLSPFGGGLPAGRFIQVKESAWVEAQGWLPAAS*DDG**R 231
Query: 307 H*ARQEGEGSGGCWVP*SQAAAIE 378
H A QEGEG GCWVP QAAAIE
Sbjct: 232 HRACQEGEGPCGCWVPRPQAAAIE 303
Score = 25.4 bits (49), Expect(2) = 1e-051
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = +2 / +2
Query: 542 SDYVMCFNRMNE 577
S YVMCF+ MNE
Sbjct: 467 SYYVMCFSHMNE 502
Score = 21.7 bits (41), Expect(2) = 4e-037
Identities = 8/12 (66%), Positives = 11/12 (91%)
Frame = -1 / -2
Query: 581 IIHSFD*ST*HS 546
+IHS++ ST*HS
Sbjct: 506 LIHSYEKST*HS 471
>gb|BJ292682.1|BJ292682 BJ292682 Y. Ogihara unpublished cDNA library, Wh_SL Triticum
aestivum cDNA clone whsl28m07 5', mRNA sequence
Length = 296
Score = 201 bits (434), Expect = 5e-051
Identities = 81/94 (86%), Positives = 91/94 (96%)
Frame = +2 / +2
Query: 95 TEESHTVEEFLQAAFGYAGLSWKDHVVIDKKYFRPAEVDSLKGDATKARKVLKWKPKVGF 274
TEE HTVEEFLQAAFGYAGL+WKDHVVIDKKYFRP+EVD L+GD++K+R+VL WKPKVGF
Sbjct: 2 TEECHTVEEFLQAAFGYAGLNWKDHVVIDKKYFRPSEVDCLQGDSSKSRRVLGWKPKVGF 181
Query: 275 QELVEMMVDHDIELAKKEKVLVDAGFRDPKQQP* 376
Q+LVEMMVD+DIELAKKEKVLVDAG+RDPKQQP*
Sbjct: 182 QQLVEMMVDNDIELAKKEKVLVDAGYRDPKQQP* 283
Score = 156 bits (336), Expect = 2e-037
Identities = 68/94 (72%), Positives = 69/94 (73%)
Frame = -3 / -3
Query: 375 YGCCLGSRNPASTRTFSFLAXXXXXXXXXXXXSWNPTLGFHLSTFLALVASPLRLSTSAG 196
YGCCLGSR PASTRTFSFLA W PTLGFH ST L L SP R STS G
Sbjct: 282 YGCCLGSRYPASTRTFSFLASSMSLSTIISTSCWKPTLGFHPSTLLDLDESPCRQSTSEG 103
Query: 195 RKYFLSMTT*SFQLRPA*PKAACRNSSTVWDSSV 94
RKYFLSMTT*SFQLRPA PKAAC+NSSTVW SSV
Sbjct: 102 RKYFLSMTT*SFQLRPAYPKAACKNSSTVWHSSV 1
Score = 106 bits (227), Expect = 2e-022
Identities = 52/84 (61%), Positives = 55/84 (65%)
Frame = +1 / +1
Query: 127 AGCLRLRRPQLEGSRGH*QEVLPACRSRQPQGGRHQGEEGAQVEAQGWVPGARGDDGRSR 306
AGC + RPQLEGS GH*QEVL P G Q +E A VEAQGW+P A DDG R
Sbjct: 34 AGCFWVCRPQLEGSCGH*QEVLSPFGGGLPAGRFIQVKESAWVEAQGWLPAAS*DDG**R 213
Query: 307 H*ARQEGEGSGGCWVP*SQAAAIE 378
H A QEGEG GCWVP QAAAIE
Sbjct: 214 HRACQEGEGPCGCWVPRPQAAAIE 285
Score = 65.7 bits (137), Expect(3) = 6e-021
Identities = 25/37 (67%), Positives = 29/37 (78%)
Frame = -1 / -1
Query: 377 SMAAAWDHGTQHPPEPSPSWRAQCRDRPSSPRAPGTQ 267
SMAAAW GTQHP PSPSW+A+CR +PSS A G+Q
Sbjct: 284 SMAAAWGRGTQHPQGPSPSWQARCRYQPSSQLAAGSQ 174
Score = 53.8 bits (111), Expect(3) = 6e-021
Identities = 23/38 (60%), Positives = 29/38 (76%)
Frame = -2 / -2
Query: 235 LGGVPLEAVDFCRPEVLLVNDHVILPAEAGVAEGSLQE 122
LG + L+AV R +VLLVNDH+ILP EAG+ + SLQE
Sbjct: 142 LG*ISLQAVHLRRAKVLLVNDHMILPVEAGIPKSSLQE 29
Score = 17.6 bits (32), Expect(3) = 6e-021
Identities = 6/8 (75%), Positives = 6/8 (75%)
Frame = -1 / -1
Query: 128 AGTPRRCG 105
A TP RCG
Sbjct: 35 ARTPPRCG 12
>gb|CD875955.1|CD875955 AZO3.108A09R011126 AZO3 Triticum aestivum cDNA clone AZO3108A09,
mRNA sequence
Length = 567
Score = 180 bits (388), Expect(3) = 8e-049
Identities = 74/95 (77%), Positives = 87/95 (91%)
Frame = +2 / -2
Query: 110 TVEEFLQAAFGYAGLSWKDHVVIDKKYFRPAEVDSLKGDATKARKVLKWKPKVGFQELVE 289
+VEEFLQAAFGYAGL+WKDHVVID+KYFRP+EVD L+GD++ +R+VL WKPKVGFQ+LVE
Sbjct: 524 SVEEFLQAAFGYAGLNWKDHVVIDQKYFRPSEVDCLQGDSS*SRRVLGWKPKVGFQQLVE 345
Query: 290 MMVDHDIELAKKEKVLVDAGFRDPKQQP*KHHSCF 394
MMVD+DIELA KEKVLVDAG+RDPKQQP* + F
Sbjct: 344 MMVDNDIELA*KEKVLVDAGYRDPKQQP*NWYQ*F 240
Score = 134 bits (287), Expect = 9e-031
Identities = 60/89 (67%), Positives = 62/89 (69%)
Frame = -3 / +1
Query: 378 FYGCCLGSRNPASTRTFSFLAXXXXXXXXXXXXSWNPTLGFHLSTFLALVASPLRLSTSA 199
FYGCCLGSR PASTRTFSF A W PTLGFH ST L SP R STS
Sbjct: 256 FYGCCLGSRYPASTRTFSF*ASSMSLSTIISTSCWKPTLGFHPSTLLD*DESP*RQSTSE 435
Query: 198 GRKYFLSMTT*SFQLRPA*PKAACRNSST 112
GRKYF S+TT*SFQLRPA PKAAC+NSST
Sbjct: 436 GRKYFWSITT*SFQLRPAYPKAACKNSST 522
Score = 103 bits (219), Expect = 2e-021
Identities = 52/84 (61%), Positives = 54/84 (64%)
Frame = +1 / -1
Query: 127 AGCLRLRRPQLEGSRGH*QEVLPACRSRQPQGGRHQGEEGAQVEAQGWVPGARGDDGRSR 306
AG +RRPQLEGS G * EVL A P GG EE A VEAQGW+P A DDG R
Sbjct: 507 AGRFWVRRPQLEGSCGD*PEVLSAFGGGLPSGGFILVEESAWVEAQGWLPAAG*DDG**R 328
Query: 307 H*ARQEGEGSGGCWVP*SQAAAIE 378
H AR EGEG GCWVP QAAAIE
Sbjct: 327 HRARLEGEGPCGCWVPRPQAAAIE 256
Score = 27.2 bits (53), Expect(3) = 8e-049
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = +2 / -1
Query: 68 EQPGDYVVATEE 103
+QP DYVVATEE
Sbjct: 567 DQPDDYVVATEE 532
Score = 25.4 bits (49), Expect(3) = 8e-049
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +1 / -1
Query: 493 RNKDCCSMILQCVHLLF*LCYVL*SNE 573
RNK+ CS+ILQ L + + Y NE
Sbjct: 138 RNKEVCSLILQYR*LSYYVAYFYHMNE 58
>gb|CA688042.1|CA688042 wlm96.pk037.o19 wlm96 Triticum aestivum cDNA clone wlm96.pk037.o19
5' end, mRNA sequence
Length = 497
Score = 189 bits (407), Expect = 3e-047
Identities = 76/95 (80%), Positives = 87/95 (91%)
Frame = +2 / -3
Query: 98 EESHTVEEFLQAAFGYAGLSWKDHVVIDKKYFRPAEVDSLKGDATKARKVLKWKPKVGFQ 277
EE HTVEEFLQAAFGYAGL+WKDHVVIDKKYFRP+EVD L+GD++K+R+VL WKPKVGFQ
Sbjct: 288 EECHTVEEFLQAAFGYAGLNWKDHVVIDKKYFRPSEVDCLQGDSSKSRRVLGWKPKVGFQ 109
Query: 278 ELVEMMVDHDIELAKKEKVLVDAGFRDPKQQP*KH 382
+LVEMMVD+DIELAKKEKVLVDAG+RDP +H
Sbjct: 108 QLVEMMVDNDIELAKKEKVLVDAGYRDPNSCRIRH 4
Score = 140 bits (301), Expect = 1e-032
Identities = 63/89 (70%), Positives = 64/89 (71%)
Frame = -3 / +2
Query: 363 LGSRNPASTRTFSFLAXXXXXXXXXXXXSWNPTLGFHLSTFLALVASPLRLSTSAGRKYF 184
LGSR PASTRTFSFLA W PTLGFH ST L L SP R STS GRKYF
Sbjct: 23 LGSRYPASTRTFSFLASSMSLSTIISTSCWKPTLGFHPSTLLDLDESPCRQSTSEGRKYF 202
Query: 183 LSMTT*SFQLRPA*PKAACRNSSTVWDSS 97
LSMTT*SFQLRPA PKAAC+NSSTVW SS
Sbjct: 203 LSMTT*SFQLRPAYPKAACKNSSTVWHSS 289
>gb|BJ249218.1|BJ249218 BJ249218 Y. Ogihara unpublished cDNA library, Wh_f Triticum
aestivum cDNA clone whf23o21 5', mRNA sequence
Length = 358
Score = 171 bits (368), Expect = 6e-042
Identities = 69/88 (78%), Positives = 81/88 (92%)
Frame = +2 / +2
Query: 131 AAFGYAGLSWKDHVVIDKKYFRPAEVDSLKGDATKARKVLKWKPKVGFQELVEMMVDHDI 310
+A GYAGL+WKDHVVIDKKYFRP+EVD L+GD++K+R+VL WKPKVGFQ+LVEMMVD+DI
Sbjct: 11 SARGYAGLNWKDHVVIDKKYFRPSEVDCLQGDSSKSRRVLGWKPKVGFQQLVEMMVDNDI 190
Query: 311 ELAKKEKVLVDAGFRDPKQQP*KHHSCF 394
ELAKKEKVLVDAG+RDPKQQP* + F
Sbjct: 191 ELAKKEKVLVDAGYRDPKQQP*NWYQ*F 274
Score = 127 bits (272), Expect = 1e-028
Identities = 56/82 (68%), Positives = 58/82 (70%)
Frame = -3 / -2
Query: 378 FYGCCLGSRNPASTRTFSFLAXXXXXXXXXXXXSWNPTLGFHLSTFLALVASPLRLSTSA 199
FYGCCLGSR PASTRTFSFLA W PTLGFH ST L L SP R STS
Sbjct: 258 FYGCCLGSRYPASTRTFSFLASSMSLSTIISTSCWKPTLGFHPSTLLDLDESP*RQSTSE 79
Query: 198 GRKYFLSMTT*SFQLRPA*PKA 133
GRKYFLS+TT*SFQLRPA P+A
Sbjct: 78 GRKYFLSITT*SFQLRPAYPRA 13
Score = 112 bits (240), Expect = 3e-024
Identities = 54/80 (67%), Positives = 56/80 (70%)
Frame = +1 / +1
Query: 139 RLRRPQLEGSRGH*QEVLPACRSRQPQGGRHQGEEGAQVEAQGWVPGARGDDGRSRH*AR 318
R+RRPQLEGS G *QEVL A P GG Q EE A VEAQGW+P A DDG RH AR
Sbjct: 19 RVRRPQLEGSCGD*QEVLSAFGGGLPSGGFIQVEESAWVEAQGWLPAAG*DDG**RHRAR 198
Query: 319 QEGEGSGGCWVP*SQAAAIE 378
QEGEG GCWVP QAAAIE
Sbjct: 199 QEGEGPCGCWVPRPQAAAIE 258
>gb|BJ299121.1|BJ299121 BJ299121 Y. Ogihara unpublished cDNA library, Wh_SL Triticum
aestivum cDNA clone whsl28m07 3', mRNA sequence
Length = 314
Score = 166 bits (358), Expect = 2e-040
Identities = 67/80 (83%), Positives = 76/80 (95%)
Frame = +2 / -1
Query: 113 VEEFLQAAFGYAGLSWKDHVVIDKKYFRPAEVDSLKGDATKARKVLKWKPKVGFQELVEM 292
VEEFLQAAFGYAGL+WKDHVVIDKKYFRP+EVD L+GD++K+R+VL WKPKVGFQ+LVEM
Sbjct: 314 VEEFLQAAFGYAGLNWKDHVVIDKKYFRPSEVDCLQGDSSKSRRVLGWKPKVGFQQLVEM 135
Query: 293 MVDHDIELAKKEKVLVDAGF 352
MVD DIELAKK KVLVDAG+
Sbjct: 134 MVDSDIELAKKXKVLVDAGY 75
Score = 120 bits (257), Expect = 1e-026
Identities = 55/81 (67%), Positives = 56/81 (69%)
Frame = -3 / +1
Query: 357 SRNPASTRTFSFLAXXXXXXXXXXXXSWNPTLGFHLSTFLALVASPLRLSTSAGRKYFLS 178
SR PASTRT SFLA W PTLGFH ST L L SP R STS GRKYFLS
Sbjct: 70 SRYPASTRTXSFLASSMSLSTIISTSCWKPTLGFHPSTLLDLDESPCRQSTSEGRKYFLS 249
Query: 177 MTT*SFQLRPA*PKAACRNSS 115
MTT*SFQLRPA PKAAC+NSS
Sbjct: 250 MTT*SFQLRPAYPKAACKNSS 312
>gb|BJ220822.1|BJ220822 BJ220822 Y. Ogihara unpublished cDNA library, Wh Triticum aestivum
cDNA clone wh21o06 3', mRNA sequence
Length = 680
Score = 131 bits (281), Expect = 6e-030
Identities = 53/70 (75%), Positives = 64/70 (91%)
Frame = +2 / -1
Query: 185 KYFRPAEVDSLKGDATKARKVLKWKPKVGFQELVEMMVDHDIELAKKEKVLVDAGFRDPK 364
+YFRP+EVD L+GD++K+R+VL WKPKVGFQ+LVEMMVD+DIELAKKEKVLVDAG+RDPK
Sbjct: 404 RYFRPSEVDCLQGDSSKSRRVLGWKPKVGFQQLVEMMVDNDIELAKKEKVLVDAGYRDPK 225
Query: 365 QQP*KHHSCF 394
QQP* + F
Sbjct: 224 QQP*SWNQ*F 195
>gb|CA681031.1|CA681031 wlm24.pk0022.g2 wlm24 Triticum aestivum cDNA clone wlm24.pk0022.g2
5' end, mRNA sequence
Length = 624
Score = 103 bits (220), Expect(3) = 4e-025
Identities = 43/54 (79%), Positives = 49/54 (90%)
Frame = +2 / -2
Query: 233 KARKVLKWKPKVGFQELVEMMVDHDIELAKKEKVLVDAGFRDPKQQP*KHHSCF 394
K+R+VL WKPKVGFQ+LVEMMVD+DIELAKKEKVLVDAG+RDPKQQP* + F
Sbjct: 242 KSRRVLGWKPKVGFQQLVEMMVDNDIELAKKEKVLVDAGYRDPKQQP*SWYR*F 81
Score = 24.9 bits (48), Expect(3) = 4e-025
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = +2 / -1
Query: 122 FLQAAFGYAGL 154
FLQ AFGY GL
Sbjct: 357 FLQXAFGYTGL 325
Score = 24.4 bits (47), Expect(3) = 4e-025
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = +2 / -3
Query: 161 KDHVVIDKKYF 193
KDHVVIDK F
Sbjct: 316 KDHVVIDKSXF 284
>gb|BJ255477.1|BJ255477 BJ255477 Y. Ogihara unpublished cDNA library, Wh_f Triticum
aestivum cDNA clone whf23o21 3', mRNA sequence
Length = 357
Score = 99.1 bits (210), Expect(2) = 5e-022
Identities = 41/51 (80%), Positives = 46/51 (90%)
Frame = +2 / -2
Query: 242 KVLKWKPKVGFQELVEMMVDHDIELAKKEKVLVDAGFRDPKQQP*KHHSCF 394
+VL WKPKVGFQ+LVEMMVD+DIELAKKEKVLVDAG+RDPKQQP* + F
Sbjct: 356 RVLGWKPKVGFQQLVEMMVDNDIELAKKEKVLVDAGYRDPKQQP*NWYQ*F 204
Score = 25.4 bits (49), Expect(2) = 5e-022
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +1 / -1
Query: 493 RNKDCCSMILQCVHLLF*LCYVL*SNE 573
RNK+ CS+ILQ L + + Y NE
Sbjct: 102 RNKEVCSLILQYR*LSYYVAYFYHMNE 22
Database: Triticum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 3:01 PM
Number of letters in database: 367,240,239
Number of sequences in database: 636,343
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 578,542,308
Number of Sequences: 636343
Number of extensions: 9149961
Number of successful extensions: 175390
Number of sequences better than 1.0e-020: 26
length of database: 122,413,413
effective HSP length: 53
effective length of database: 88,687,234
effective search space used: 13657834036
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)