TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2478343.2.1
(694 letters)
Database: Triticum_nucl_with_EST.fasta
636,343 sequences; 367,240,239 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CA624642.1|CA624642 wl1n.pk0121.g11 wl1n Triticum aestiv... 226 2e-061
gb|CD373574.1|CD373574 WHE0425_A04_A07ZT CS wheat etiolated... 121 1e-033
gb|BQ578302.1|BQ578302 WHE0301_D03_G05ZS Wheat unstressed s... 121 1e-033
gb|BQ752889.1|BQ752889 WHE4120_D01_H02ZS Wheat salt-stresse... 131 1e-032
gb|CD453688.1|CD453688 WHE0840_E04_J08ZT CS wheat vernalize... 131 1e-032
gb|CA721277.1|CA721277 wdk9n.pk001.e20 wdk9n Triticum aesti... 131 1e-032
gb|CD867745.1|CD867745 AZO2.107B06R010328 AZO2 Triticum aes... 117 2e-032
gb|BF474053.1|BF474053 WHE0840_E04_J08ZS Wheat vernalized c... 129 6e-032
gb|CD915387.1|CD915387 G550.125P10F010713 G550 Triticum aes... 128 1e-031
gb|BE425760.1|BE425760 WHE0316_C11_C11ZS Wheat unstressed s... 129 2e-031
gb|BJ281677.1|BJ281677 BJ281677 Y. Ogihara unpublished cDNA... 121 7e-031
gb|CA615942.1|CA615942 wr1.pk166.f6 wr1 Triticum aestivum c... 114 1e-030
gb|CK193504.1|CK193504 FGAS001918 Triticum aestivum FGAS: L... 121 5e-030
gb|CD865781.1|CD865781 AZO2.101M06F001124 AZO2 Triticum aes... 115 6e-029
gb|CA604693.1|CA604693 wr1.pk0043.b10 wr1 Triticum aestivum... 100 5e-027
gb|BE406114.1|BE406114 WHE0404_c07_c07zB Wheat etiolated se... 120 2e-026
gb|CA630327.1|CA630327 wle1n.pk0032.d11 wle1n Triticum aest... 92 8e-025
gb|BG313174.1|BG313174 WHE2054_F07_L14ZS Wheat salt-stresse... 72 1e-024
gb|BQ483975.1|BQ483975 WHE3515_A05_B09ZS Wheat unstressed r... 112 5e-024
gb|BE405606.1|BE405606 WHE1209_C09_E17ZS Wheat etiolated se... 111 1e-023
gb|BJ284242.1|BJ284242 BJ284242 Y. Ogihara unpublished cDNA... 108 8e-023
gb|CA615835.1|CA615835 wr1.pk169.d2 wr1 Triticum aestivum c... 89 2e-022
gb|CV765720.1|CV765720 FGAS060107 Triticum aestivum FGAS: L... 71 2e-022
gb|BQ743938.1|BQ743938 WHE4109_H10_O19ZS Wheat salt-stresse... 105 4e-022
gb|CA700350.1|CA700350 wkm1c.pk005.e20 wkm1c Triticum aesti... 105 4e-022
gb|CA720605.1|CA720605 wkm2n.pk007.f4 wkm2n Triticum aestiv... 91 1e-021
gb|CA604032.1|CA604032 wr1.pk0033.e10 wr1 Triticum aestivum... 79 3e-021
gb|BE428405.1|BE428405 MTD006.F09F990616 ITEC MTD Durum Whe... 91 9e-021
>gb|CA624642.1|CA624642 wl1n.pk0121.g11 wl1n Triticum aestivum cDNA clone wl1n.pk0121.g11
5' end, mRNA sequence
Length = 609
Score = 226 bits (488), Expect(2) = 2e-061
Identities = 99/113 (87%), Positives = 100/113 (88%)
Frame = -2 / -2
Query: 615 GVPMICHPRHGDQYGNARYVCHVWKVGTEVAGDQLERGEIKAAIDRLMGGSEEGEGIRKR 436
G P+I RHGD HVWKVGTEVAGDQLERGEIKAAIDRLMGGSEEGEGIRKR
Sbjct: 350 GFPLIXTRRHGDXXRQREVRXHVWKVGTEVAGDQLERGEIKAAIDRLMGGSEEGEGIRKR 171
Query: 435 MNELKIAADKGIDESAGSDLTNLVHLINSY*SILVLGTMFRMMSWNKSKLVFQ 277
MNELKIAADKGIDESAGSDLTNLVHLINSY*SILVLGTMFRMMSWNKSKLVFQ
Sbjct: 170 MNELKIAADKGIDESAGSDLTNLVHLINSY*SILVLGTMFRMMSWNKSKLVFQ 12
Score = 188 bits (404), Expect(2) = 3e-048
Identities = 79/91 (86%), Positives = 79/91 (86%)
Frame = +1 / +3
Query: 277 LEHKF*FIPTHHPEHGTQYKDRSVGVYEMNQIS*IRPSRFIDALVRSDLELVHXXXXXXX 456
LEHKF*FIPTHHPEHGTQYKDRSVGVYEMNQIS*IRPSRFIDALVRSDLELVH
Sbjct: 12 LEHKF*FIPTHHPEHGTQYKDRSVGVYEMNQIS*IRPSRFIDALVRSDLELVHPLPDALP 191
Query: 457 XXXXXHEPVDGGLDLPSLQLVPGDLRAHLPD 549
HEPVDGGLDLPSLQLVPGDLRAHLPD
Sbjct: 192 FLAAAHEPVDGGLDLPSLQLVPGDLRAHLPD 284
Score = 128 bits (275), Expect(4) = 2e-043
Identities = 50/50 (100%), Positives = 50/50 (100%)
Frame = -1 / -1
Query: 427 AQDRCGQGHR*ICWVGFN*FGSSHKLLLIDPCIGYHVPDDELE*IKTCVP 278
AQDRCGQGHR*ICWVGFN*FGSSHKLLLIDPCIGYHVPDDELE*IKTCVP
Sbjct: 162 AQDRCGQGHR*ICWVGFN*FGSSHKLLLIDPCIGYHVPDDELE*IKTCVP 13
Score = 109 bits (232), Expect(2) = 1e-036
Identities = 47/47 (100%), Positives = 47/47 (100%)
Frame = +2 / +1
Query: 278 WNTSFDLFQLIIRNMVPNTRIDQ*EFMR*TKLVKSDPADSSMPLSAA 418
WNTSFDLFQLIIRNMVPNTRIDQ*EFMR*TKLVKSDPADSSMPLSAA
Sbjct: 13 WNTSFDLFQLIIRNMVPNTRIDQ*EFMR*TKLVKSDPADSSMPLSAA 153
Score = 65.2 bits (136), Expect(2) = 1e-036
Identities = 27/40 (67%), Positives = 27/40 (67%)
Frame = +2 / +1
Query: 497 ISPLSSWSPATSVPTFQTWHTYLALPYWSPWRGWQIMGTP 616
ISPLSSWSPATSVPTFQTW Y SPWR I G P
Sbjct: 232 ISPLSSWSPATSVPTFQTWXRTSRCRYXSPWRRVXIKGKP 351
Score = 55.6 bits (115), Expect(4) = 2e-043
Identities = 20/20 (100%), Positives = 20/20 (100%)
Frame = -3 / -3
Query: 539 WARRSPGTSWREGRSRPPST 480
WARRSPGTSWREGRSRPPST
Sbjct: 274 WARRSPGTSWREGRSRPPST 215
Score = 30.9 bits (61), Expect(2) = 2e-061
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = -2 / -1
Query: 678 PAVGGFFTHCGWNSTVE 628
P G F CGWNSTVE
Sbjct: 411 PGXGRXFHPCGWNSTVE 361
Score = 26.3 bits (51), Expect(4) = 2e-043
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = -2 / -2
Query: 690 VLAHPAVGGFFTH 652
V HPA G FFTH
Sbjct: 422 VXXHPAXGXFFTH 384
Score = 24.9 bits (48), Expect(2) = 3e-048
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = +2 / +1
Query: 653 WVKKPPTAGCAST 691
WVK P AGC T
Sbjct: 385 WVKXXPXAGCXXT 423
Score = 22.1 bits (42), Expect(4) = 2e-043
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = -2 / -3
Query: 627 AVSEGVPMICHPRHGDQYGNARYV 556
AVSE P G GNARYV
Sbjct: 361 AVSEASP*XPPGATGTXXGNARYV 290
>gb|CD373574.1|CD373574 WHE0425_A04_A07ZT CS wheat etiolated seedling root cDNA library
Triticum aestivum cDNA clone WHE0425_A04_A07, mRNA
sequence
Length = 680
Score = 121 bits (259), Expect(3) = 1e-033
Identities = 46/56 (82%), Positives = 48/56 (85%)
Frame = -2 / -1
Query: 693 EVLAHPAVGGFFTHCGWNSTVEAVSEGVPMICHPRHGDQYGNARYVCHVWKVGTEV 526
EVLAHPAVG F TH GWNSTVEAVSEGVPMIC P HGDQ+ NARYVC VWKVG E+
Sbjct: 485 EVLAHPAVGAFITHSGWNSTVEAVSEGVPMICLPLHGDQFSNARYVCDVWKVGVEI 318
Score = 93.2 bits (197), Expect(2) = 3e-022
Identities = 41/55 (74%), Positives = 42/55 (76%)
Frame = +2 / +1
Query: 530 SVPTFQTWHTYLALPYWSPWRGWQIMGTPSDTASTVEFQPQWVKKPPTAGCASTS 694
S PTFQT HTYLAL WSP G I+GTPSDTASTVEFQP V K PTAG ASTS
Sbjct: 322 STPTFQTSHTYLALLNWSPCNGRHIIGTPSDTASTVEFQPLCVMKAPTAGWASTS 486
Score = 33.1 bits (66), Expect(3) = 1e-033
Identities = 13/18 (72%), Positives = 14/18 (77%)
Frame = -3 / -2
Query: 533 RRSPGTSWREGRSRPPST 480
RR G +WREGRSR PST
Sbjct: 310 RRRLGRTWREGRSRLPST 257
Score = 32.7 bits (65), Expect(2) = 3e-022
Identities = 13/21 (61%), Positives = 15/21 (71%)
Frame = +1 / +3
Query: 472 HEPVDGGLDLPSLQLVPGDLR 534
H VDG LDLPSLQ++P R
Sbjct: 249 HNLVDGSLDLPSLQVLPSRRR 311
Score = 27.2 bits (53), Expect(3) = 1e-033
Identities = 9/19 (47%), Positives = 16/19 (84%)
Frame = -2 / -1
Query: 453 EGIRKRMNELKIAADKGID 397
+GIR+RM+ K+AAD+ ++
Sbjct: 242 KGIRERMDAFKLAADEAVN 186
>gb|BQ578302.1|BQ578302 WHE0301_D03_G05ZS Wheat unstressed seedling shoot cDNA library
Triticum aestivum cDNA clone WHE0301_D03_G05, mRNA
sequence
Length = 662
Score = 121 bits (259), Expect(3) = 1e-033
Identities = 46/56 (82%), Positives = 48/56 (85%)
Frame = -2 / +1
Query: 693 EVLAHPAVGGFFTHCGWNSTVEAVSEGVPMICHPRHGDQYGNARYVCHVWKVGTEV 526
EVLAHPAVG F TH GWNSTVEAVSEGVPMIC P HGDQ+ NARYVC VWKVG E+
Sbjct: 142 EVLAHPAVGAFITHSGWNSTVEAVSEGVPMICLPLHGDQFSNARYVCDVWKVGVEI 309
Score = 93.2 bits (197), Expect(2) = 3e-022
Identities = 41/55 (74%), Positives = 42/55 (76%)
Frame = +2 / -1
Query: 530 SVPTFQTWHTYLALPYWSPWRGWQIMGTPSDTASTVEFQPQWVKKPPTAGCASTS 694
S PTFQT HTYLAL WSP G I+GTPSDTASTVEFQP V K PTAG ASTS
Sbjct: 305 STPTFQTSHTYLALLNWSPCNGRHIIGTPSDTASTVEFQPLCVMKAPTAGWASTS 141
Score = 33.1 bits (66), Expect(3) = 1e-033
Identities = 13/18 (72%), Positives = 14/18 (77%)
Frame = -3 / +2
Query: 533 RRSPGTSWREGRSRPPST 480
RR G +WREGRSR PST
Sbjct: 317 RRRLGRTWREGRSRLPST 370
Score = 32.7 bits (65), Expect(2) = 3e-022
Identities = 13/21 (61%), Positives = 15/21 (71%)
Frame = +1 / -3
Query: 472 HEPVDGGLDLPSLQLVPGDLR 534
H VDG LDLPSLQ++P R
Sbjct: 378 HNLVDGSLDLPSLQVLPSRRR 316
Score = 27.2 bits (53), Expect(3) = 1e-033
Identities = 9/19 (47%), Positives = 16/19 (84%)
Frame = -2 / +1
Query: 453 EGIRKRMNELKIAADKGID 397
+GIR+RM+ K+AAD+ ++
Sbjct: 385 KGIRERMDAFKLAADEAVN 441
>gb|BQ752889.1|BQ752889 WHE4120_D01_H02ZS Wheat salt-stressed root cDNA library Triticum
aestivum cDNA clone WHE4120_D01_H02, mRNA sequence
Length = 754
Score = 131 bits (281), Expect(2) = 1e-032
Identities = 50/58 (86%), Positives = 51/58 (87%)
Frame = -2 / +1
Query: 693 EVLAHPAVGGFFTHCGWNSTVEAVSEGVPMICHPRHGDQYGNARYVCHVWKVGTEVAG 520
EVLAHPAVG FFTH GWNSTVEA+SEGVPMICHP HGDQYGNARYV VWKVG EV G
Sbjct: 394 EVLAHPAVGAFFTHSGWNSTVEAISEGVPMICHPLHGDQYGNARYVADVWKVGVEVDG 567
Score = 112 bits (239), Expect(2) = 9e-027
Identities = 45/58 (77%), Positives = 48/58 (82%)
Frame = +2 / -3
Query: 521 PATSVPTFQTWHTYLALPYWSPWRGWQIMGTPSDTASTVEFQPQWVKKPPTAGCASTS 694
P+TS PTF T TYLALPYWSP GWQI+GTPS+ ASTVEFQP VKK PTAGCASTS
Sbjct: 566 PSTSTPTFHTSATYLALPYWSPCSGWQIIGTPSEIASTVEFQPLCVKKAPTAGCASTS 393
Score = 29.0 bits (57), Expect(2) = 1e-032
Identities = 13/22 (59%), Positives = 15/22 (68%)
Frame = -2 / +1
Query: 516 QLERGEIKAAIDRLMGGSEEGE 451
+LERG IKAAI R+M E E
Sbjct: 574 RLERGSIKAAIGRMMESGEGRE 639
Score = 28.6 bits (56), Expect(2) = 9e-027
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = +1 / -2
Query: 472 HEPVDGGLDLPSLQLV 519
H P +GGLD PSLQ V
Sbjct: 618 HHPPNGGLDTPSLQPV 571
>gb|CD453688.1|CD453688 WHE0840_E04_J08ZT CS wheat vernalized crown cDNA library Triticum
aestivum cDNA clone WHE0840_E04_J08, mRNA sequence
Length = 537
Score = 131 bits (281), Expect(2) = 1e-032
Identities = 50/58 (86%), Positives = 51/58 (87%)
Frame = -2 / -3
Query: 693 EVLAHPAVGGFFTHCGWNSTVEAVSEGVPMICHPRHGDQYGNARYVCHVWKVGTEVAG 520
EVLAHPAVG FFTH GWNSTVEA+SEGVPMICHP HGDQYGNARYV VWKVG EV G
Sbjct: 472 EVLAHPAVGAFFTHSGWNSTVEAISEGVPMICHPLHGDQYGNARYVADVWKVGVEVDG 299
Score = 112 bits (239), Expect(3) = 2e-027
Identities = 45/58 (77%), Positives = 48/58 (82%)
Frame = +2 / +3
Query: 521 PATSVPTFQTWHTYLALPYWSPWRGWQIMGTPSDTASTVEFQPQWVKKPPTAGCASTS 694
P+TS PTF T TYLALPYWSP GWQI+GTPS+ ASTVEFQP VKK PTAGCASTS
Sbjct: 300 PSTSTPTFHTSATYLALPYWSPCSGWQIIGTPSEIASTVEFQPLCVKKAPTAGCASTS 473
Score = 29.0 bits (57), Expect(2) = 1e-032
Identities = 13/22 (59%), Positives = 15/22 (68%)
Frame = -2 / -3
Query: 516 QLERGEIKAAIDRLMGGSEEGE 451
+LERG IKAAI R+M E E
Sbjct: 292 RLERGSIKAAIGRMMESGEGRE 227
Score = 28.6 bits (56), Expect(3) = 2e-027
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = +1 / +2
Query: 472 HEPVDGGLDLPSLQLV 519
H P +GGLD PSLQ V
Sbjct: 248 HHPPNGGLDTPSLQPV 295
Score = 22.1 bits (42), Expect(3) = 2e-027
Identities = 7/8 (87%), Positives = 8/8 (100%)
Frame = +3 / +3
Query: 3 FFFFFYLR 26
FFFFF+LR
Sbjct: 3 FFFFFFLR 26
>gb|CA721277.1|CA721277 wdk9n.pk001.e20 wdk9n Triticum aestivum cDNA clone wdk9n.pk001.e20
5' end, mRNA sequence
Length = 516
Score = 131 bits (281), Expect(2) = 1e-032
Identities = 50/58 (86%), Positives = 51/58 (87%)
Frame = -2 / -3
Query: 693 EVLAHPAVGGFFTHCGWNSTVEAVSEGVPMICHPRHGDQYGNARYVCHVWKVGTEVAG 520
EVLAHPAVG FFTH GWNSTVEA+SEGVPMICHP HGDQYGNARYV VWKVG EV G
Sbjct: 472 EVLAHPAVGAFFTHSGWNSTVEAISEGVPMICHPLHGDQYGNARYVADVWKVGVEVDG 299
Score = 112 bits (239), Expect(2) = 9e-027
Identities = 45/58 (77%), Positives = 48/58 (82%)
Frame = +2 / +3
Query: 521 PATSVPTFQTWHTYLALPYWSPWRGWQIMGTPSDTASTVEFQPQWVKKPPTAGCASTS 694
P+TS PTF T TYLALPYWSP GWQI+GTPS+ ASTVEFQP VKK PTAGCASTS
Sbjct: 300 PSTSTPTFHTSATYLALPYWSPCSGWQIIGTPSEIASTVEFQPLCVKKAPTAGCASTS 473
Score = 29.0 bits (57), Expect(2) = 1e-032
Identities = 13/22 (59%), Positives = 15/22 (68%)
Frame = -2 / -3
Query: 516 QLERGEIKAAIDRLMGGSEEGE 451
+LERG IKAAI R+M E E
Sbjct: 292 RLERGSIKAAIGRMMESGEGRE 227
Score = 28.6 bits (56), Expect(2) = 9e-027
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = +1 / +2
Query: 472 HEPVDGGLDLPSLQLV 519
H P +GGLD PSLQ V
Sbjct: 248 HHPPNGGLDTPSLQPV 295
>gb|CD867745.1|CD867745 AZO2.107B06R010328 AZO2 Triticum aestivum cDNA clone AZO2107B06,
mRNA sequence
Length = 542
Score = 117 bits (251), Expect(3) = 2e-032
Identities = 45/56 (80%), Positives = 47/56 (83%)
Frame = -2 / -2
Query: 693 EVLAHPAVGGFFTHCGWNSTVEAVSEGVPMICHPRHGDQYGNARYVCHVWKVGTEV 526
EVLAHPAVG F T GWNSTVEAVSEGVPMIC P HGDQ+ NARYVC VWKVG E+
Sbjct: 481 EVLAHPAVGAFITRSGWNSTVEAVSEGVPMICLPLHGDQFSNARYVCDVWKVGVEI 314
Score = 92.7 bits (196), Expect(2) = 4e-022
Identities = 41/55 (74%), Positives = 42/55 (76%)
Frame = +2 / +3
Query: 530 SVPTFQTWHTYLALPYWSPWRGWQIMGTPSDTASTVEFQPQWVKKPPTAGCASTS 694
S PTFQT HTYLAL WSP G I+GTPSDTASTVEFQP V K PTAG ASTS
Sbjct: 318 STPTFQTSHTYLALLNWSPCNGRHIIGTPSDTASTVEFQPLRVMKAPTAGWASTS 482
Score = 33.1 bits (66), Expect(3) = 2e-032
Identities = 13/18 (72%), Positives = 14/18 (77%)
Frame = -3 / -3
Query: 533 RRSPGTSWREGRSRPPST 480
RR G +WREGRSR PST
Sbjct: 306 RRRLGRTWREGRSRLPST 253
Score = 32.7 bits (65), Expect(2) = 4e-022
Identities = 13/21 (61%), Positives = 15/21 (71%)
Frame = +1 / +2
Query: 472 HEPVDGGLDLPSLQLVPGDLR 534
H VDG LDLPSLQ++P R
Sbjct: 245 HNLVDGSLDLPSLQVLPSRRR 307
Score = 27.2 bits (53), Expect(3) = 2e-032
Identities = 9/19 (47%), Positives = 16/19 (84%)
Frame = -2 / -2
Query: 453 EGIRKRMNELKIAADKGID 397
+GIR+RM+ K+AAD+ ++
Sbjct: 238 KGIRERMDAFKLAADEAVN 182
>gb|BF474053.1|BF474053 WHE0840_E04_J08ZS Wheat vernalized crown cDNA library Triticum
aestivum cDNA clone WHE0840_E04_J08, mRNA sequence
Length = 450
Score = 129 bits (276), Expect(2) = 6e-032
Identities = 49/57 (85%), Positives = 50/57 (87%)
Frame = -2 / +1
Query: 690 VLAHPAVGGFFTHCGWNSTVEAVSEGVPMICHPRHGDQYGNARYVCHVWKVGTEVAG 520
VLAHPAVG FFTH GWNSTVEA+SEGVPMICHP HGDQYGNARYV VWKVG EV G
Sbjct: 1 VLAHPAVGAFFTHSGWNSTVEAISEGVPMICHPLHGDQYGNARYVADVWKVGVEVDG 171
Score = 108 bits (230), Expect(2) = 2e-025
Identities = 43/56 (76%), Positives = 46/56 (82%)
Frame = +2 / -2
Query: 521 PATSVPTFQTWHTYLALPYWSPWRGWQIMGTPSDTASTVEFQPQWVKKPPTAGCAS 688
P+TS PTF T TYLALPYWSP GWQI+GTPS+ ASTVEFQP VKK PTAGCAS
Sbjct: 170 PSTSTPTFHTSATYLALPYWSPCSGWQIIGTPSEIASTVEFQPLCVKKAPTAGCAS 3
Score = 29.0 bits (57), Expect(2) = 6e-032
Identities = 13/22 (59%), Positives = 15/22 (68%)
Frame = -2 / +1
Query: 516 QLERGEIKAAIDRLMGGSEEGE 451
+LERG IKAAI R+M E E
Sbjct: 178 RLERGSIKAAIGRMMESGEGRE 243
Score = 28.6 bits (56), Expect(2) = 2e-025
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = +1 / -1
Query: 472 HEPVDGGLDLPSLQLV 519
H P +GGLD PSLQ V
Sbjct: 222 HHPPNGGLDTPSLQPV 175
>gb|CD915387.1|CD915387 G550.125P10F010713 G550 Triticum aestivum cDNA clone G550125P10,
mRNA sequence
Length = 463
Score = 128 bits (275), Expect(2) = 1e-031
Identities = 48/58 (82%), Positives = 51/58 (87%)
Frame = -2 / +2
Query: 693 EVLAHPAVGGFFTHCGWNSTVEAVSEGVPMICHPRHGDQYGNARYVCHVWKVGTEVAG 520
EVLAHPAVG FFTH GWNSTVEA++EGVPMICHP HGDQYGNARYV VW+VG EV G
Sbjct: 104 EVLAHPAVGAFFTHSGWNSTVEAIAEGVPMICHPLHGDQYGNARYVADVWRVGVEVDG 277
Score = 116 bits (248), Expect(2) = 4e-028
Identities = 47/62 (75%), Positives = 49/62 (79%)
Frame = +2 / -2
Query: 509 SSWSPATSVPTFQTWHTYLALPYWSPWRGWQIMGTPSDTASTVEFQPQWVKKPPTAGCAS 688
S P+TS PT QT TYLALPYWSP GWQI+GTPS ASTVEFQP WVKK PTAGCAS
Sbjct: 288 SRCEPSTSTPTLQTSATYLALPYWSPCSGWQIIGTPSAIASTVEFQPLWVKKAPTAGCAS 109
Query: 689 TS 694
TS
Sbjct: 108 TS 103
Score = 29.0 bits (57), Expect(2) = 4e-028
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = +1 / -1
Query: 472 HEPVDGGLDLPSLQLV 519
H P++GGLD PSLQ V
Sbjct: 328 HHPLNGGLDPPSLQPV 281
Score = 28.6 bits (56), Expect(2) = 1e-031
Identities = 11/15 (73%), Positives = 14/15 (93%)
Frame = -2 / +2
Query: 516 QLERGEIKAAIDRLM 472
+LERG IKAAI+R+M
Sbjct: 284 RLERGRIKAAIERMM 328
>gb|BE425760.1|BE425760 WHE0316_C11_C11ZS Wheat unstressed seedling shoot cDNA library
Triticum aestivum cDNA clone WHE0316_C11_C11, mRNA
sequence
Length = 372
Score = 129 bits (277), Expect(2) = 2e-031
Identities = 49/56 (87%), Positives = 50/56 (89%)
Frame = -2 / +2
Query: 693 EVLAHPAVGGFFTHCGWNSTVEAVSEGVPMICHPRHGDQYGNARYVCHVWKVGTEV 526
EVLAHPAVG FFTH GWNSTVEA+SEGVPMICHP HGDQYGNARYV VWKVG EV
Sbjct: 125 EVLAHPAVGAFFTHSGWNSTVEAISEGVPMICHPLHGDQYGNARYVADVWKVGVEV 292
Score = 109 bits (232), Expect(2) = 2e-025
Identities = 44/57 (77%), Positives = 47/57 (82%)
Frame = +2 / -1
Query: 524 ATSVPTFQTWHTYLALPYWSPWRGWQIMGTPSDTASTVEFQPQWVKKPPTAGCASTS 694
+TS PTF T TYLALPYWSP GWQI+GTPS+ ASTVEFQP VKK PTAGCASTS
Sbjct: 294 STSTPTFHTSATYLALPYWSPCSGWQIIGTPSEIASTVEFQPLCVKKAPTAGCASTS 124
Score = 27.6 bits (54), Expect(2) = 2e-025
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = +1 / -3
Query: 472 HEPVDGGLDLPSLQLV 519
H P +GG+D PSLQ V
Sbjct: 349 HHPPNGGIDTPSLQPV 302
Score = 26.7 bits (52), Expect(2) = 2e-031
Identities = 12/22 (54%), Positives = 14/22 (63%)
Frame = -2 / +2
Query: 516 QLERGEIKAAIDRLMGGSEEGE 451
+LERG I AAI R+M E E
Sbjct: 305 RLERGSINAAIGRMMESGEGRE 370
>gb|BJ281677.1|BJ281677 BJ281677 Y. Ogihara unpublished cDNA library, Wh_r Triticum
aestivum cDNA clone whr23e01 5', mRNA sequence
Length = 549
Score = 121 bits (259), Expect(2) = 7e-031
Identities = 46/56 (82%), Positives = 48/56 (85%)
Frame = -2 / +3
Query: 693 EVLAHPAVGGFFTHCGWNSTVEAVSEGVPMICHPRHGDQYGNARYVCHVWKVGTEV 526
EVLAHPAVG F TH GWNSTVEAVSEGVPMIC P HGDQ+ NARYVC VWKVG E+
Sbjct: 279 EVLAHPAVGAFITHSGWNSTVEAVSEGVPMICLPLHGDQFSNARYVCDVWKVGVEI 446
Score = 93.2 bits (197), Expect(2) = 3e-022
Identities = 41/55 (74%), Positives = 42/55 (76%)
Frame = +2 / -3
Query: 530 SVPTFQTWHTYLALPYWSPWRGWQIMGTPSDTASTVEFQPQWVKKPPTAGCASTS 694
S PTFQT HTYLAL WSP G I+GTPSDTASTVEFQP V K PTAG ASTS
Sbjct: 442 STPTFQTSHTYLALLNWSPCNGRHIIGTPSDTASTVEFQPLCVMKAPTAGWASTS 278
Score = 33.1 bits (66), Expect(2) = 7e-031
Identities = 13/18 (72%), Positives = 14/18 (77%)
Frame = -3 / +1
Query: 533 RRSPGTSWREGRSRPPST 480
RR G +WREGRSR PST
Sbjct: 454 RRRLGRTWREGRSRLPST 507
Score = 32.7 bits (65), Expect(2) = 3e-022
Identities = 13/21 (61%), Positives = 15/21 (71%)
Frame = +1 / -2
Query: 472 HEPVDGGLDLPSLQLVPGDLR 534
H VDG LDLPSLQ++P R
Sbjct: 515 HNLVDGSLDLPSLQVLPSRRR 453
>gb|CA615942.1|CA615942 wr1.pk166.f6 wr1 Triticum aestivum cDNA clone wr1.pk166.f6 5' end,
mRNA sequence
Length = 464
Score = 114 bits (243), Expect(3) = 1e-030
Identities = 43/54 (79%), Positives = 45/54 (83%)
Frame = -2 / +1
Query: 687 LAHPAVGGFFTHCGWNSTVEAVSEGVPMICHPRHGDQYGNARYVCHVWKVGTEV 526
LAHPAVG F TH GWNSTV AVSEGVPMIC P HGDQ+ NARYVC VWKVG E+
Sbjct: 1 LAHPAVGAFITHSGWNSTVXAVSEGVPMICLPLHGDQFSNARYVCDVWKVGMEI 162
Score = 88.6 bits (187), Expect(2) = 6e-021
Identities = 38/52 (73%), Positives = 40/52 (76%)
Frame = +2 / -1
Query: 530 SVPTFQTWHTYLALPYWSPWRGWQIMGTPSDTASTVEFQPQWVKKPPTAGCA 685
S+PTFQT HTYLAL WSP G I+GTPSDTASTVEFQP V K PTAG A
Sbjct: 158 SIPTFQTSHTYLALLNWSPCNGRHIIGTPSDTASTVEFQPLCVMKAPTAGWA 3
Score = 33.1 bits (66), Expect(3) = 1e-030
Identities = 13/18 (72%), Positives = 14/18 (77%)
Frame = -3 / +2
Query: 533 RRSPGTSWREGRSRPPST 480
RR G +WREGRSR PST
Sbjct: 170 RRRLGRTWREGRSRLPST 223
Score = 32.7 bits (65), Expect(2) = 6e-021
Identities = 13/21 (61%), Positives = 15/21 (71%)
Frame = +1 / -3
Query: 472 HEPVDGGLDLPSLQLVPGDLR 534
H VDG LDLPSLQ++P R
Sbjct: 231 HNLVDGSLDLPSLQVLPSRRR 169
Score = 24.4 bits (47), Expect(3) = 1e-030
Identities = 8/19 (42%), Positives = 15/19 (78%)
Frame = -2 / +1
Query: 453 EGIRKRMNELKIAADKGID 397
+GIR+RM+ +AAD+ ++
Sbjct: 238 KGIRERMDAFXLAADEAVN 294
>gb|CK193504.1|CK193504 FGAS001918 Triticum aestivum FGAS: Library 3 Gate 6 Triticum
aestivum cDNA, mRNA sequence
Length = 821
Score = 121 bits (258), Expect(2) = 5e-030
Identities = 46/56 (82%), Positives = 48/56 (85%)
Frame = -2 / +2
Query: 693 EVLAHPAVGGFFTHCGWNSTVEAVSEGVPMICHPRHGDQYGNARYVCHVWKVGTEV 526
EVLAHPAVG F TH GWNSTVEAVSEGVPMIC P HGDQ+ NARYVC VWKVG E+
Sbjct: 407 EVLAHPAVGAFITHSGWNSTVEAVSEGVPMICLPLHGDQFSNARYVCDVWKVGMEI 574
Score = 94.5 bits (200), Expect(2) = 7e-022
Identities = 41/55 (74%), Positives = 43/55 (78%)
Frame = +2 / -3
Query: 530 SVPTFQTWHTYLALPYWSPWRGWQIMGTPSDTASTVEFQPQWVKKPPTAGCASTS 694
S+PTFQT HTYLAL WSP G I+GTPSDTASTVEFQP V K PTAG ASTS
Sbjct: 570 SIPTFQTSHTYLALLNWSPCNGRHIIGTPSDTASTVEFQPLCVMKAPTAGWASTS 406
Score = 30.9 bits (61), Expect(2) = 5e-030
Identities = 12/17 (70%), Positives = 13/17 (76%)
Frame = -3 / +3
Query: 530 RSPGTSWREGRSRPPST 480
R G +WREGRSR PST
Sbjct: 585 RRLGRTWREGRSRLPST 635
Score = 29.9 bits (59), Expect(2) = 7e-022
Identities = 11/14 (78%), Positives = 13/14 (92%)
Frame = +1 / -2
Query: 481 VDGGLDLPSLQLVP 522
VDG LDLPSLQ++P
Sbjct: 634 VDGSLDLPSLQVLP 593
>gb|CD865781.1|CD865781 AZO2.101M06F001124 AZO2 Triticum aestivum cDNA clone AZO2101M06,
mRNA sequence
Length = 723
Score = 115 bits (245), Expect(2) = 6e-029
Identities = 44/52 (84%), Positives = 45/52 (86%)
Frame = -2 / +1
Query: 693 EVLAHPAVGGFFTHCGWNSTVEAVSEGVPMICHPRHGDQYGNARYVCHVWKV 538
EVLAHPAVG F TH GWNSTVEAVSEGVPMIC P HGDQ+ NARYVC VWKV
Sbjct: 424 EVLAHPAVGAFITHSGWNSTVEAVSEGVPMICLPLHGDQFSNARYVCDVWKV 579
Score = 90.9 bits (192), Expect(2) = 1e-021
Identities = 40/59 (67%), Positives = 44/59 (74%)
Frame = +2 / -2
Query: 518 SPATSVPTFQTWHTYLALPYWSPWRGWQIMGTPSDTASTVEFQPQWVKKPPTAGCASTS 694
+P + + TFQT HTYLAL WSP G I+GTPSDTASTVEFQP V K PTAG ASTS
Sbjct: 599 TPRSPLXTFQTSHTYLALLNWSPCNGRHIIGTPSDTASTVEFQPLCVMKAPTAGWASTS 423
Score = 33.1 bits (66), Expect(2) = 6e-029
Identities = 13/18 (72%), Positives = 14/18 (77%)
Frame = -3 / +3
Query: 533 RRSPGTSWREGRSRPPST 480
RR G +WREGRSR PST
Sbjct: 600 RRRLGRTWREGRSRLPST 653
Score = 32.7 bits (65), Expect(2) = 1e-021
Identities = 13/21 (61%), Positives = 15/21 (71%)
Frame = +1 / -3
Query: 472 HEPVDGGLDLPSLQLVPGDLR 534
H VDG LDLPSLQ++P R
Sbjct: 661 HNLVDGSLDLPSLQVLPSRRR 599
>gb|CA604693.1|CA604693 wr1.pk0043.b10 wr1 Triticum aestivum cDNA clone wr1.pk0043.b10 5'
end, mRNA sequence
Length = 708
Score = 100 bits (212), Expect(3) = 5e-027
Identities = 37/46 (80%), Positives = 39/46 (84%)
Frame = -2 / +3
Query: 663 FFTHCGWNSTVEAVSEGVPMICHPRHGDQYGNARYVCHVWKVGTEV 526
F TH GWNSTVEAVSEGVPMIC P HGDQ+ NARYVC VWKVG E+
Sbjct: 3 FITHSGWNSTVEAVSEGVPMICLPLHGDQFSNARYVCDVWKVGMEI 140
Score = 33.1 bits (66), Expect(3) = 5e-027
Identities = 13/18 (72%), Positives = 14/18 (77%)
Frame = -3 / +1
Query: 533 RRSPGTSWREGRSRPPST 480
RR G +WREGRSR PST
Sbjct: 148 RRRLGRTWREGRSRLPST 201
Score = 26.3 bits (51), Expect(3) = 5e-027
Identities = 9/18 (50%), Positives = 15/18 (83%)
Frame = -2 / +3
Query: 453 EGIRKRMNELKIAADKGI 400
+GIR+RM+ K+AAD+ +
Sbjct: 216 KGIRERMDAFKLAADEAL 269
>gb|BE406114.1|BE406114 WHE0404_c07_c07zB Wheat etiolated seedling root cDNA library
Triticum aestivum cDNA clone WHE0404_c07_c07, mRNA
sequence
Length = 385
Score = 120 bits (256), Expect = 2e-026
Identities = 46/56 (82%), Positives = 48/56 (85%)
Frame = -2 / +2
Query: 693 EVLAHPAVGGFFTHCGWNSTVEAVSEGVPMICHPRHGDQYGNARYVCHVWKVGTEV 526
EVLAHPAVG F TH GWNSTVEAVSEGVPMIC P HGDQ+ NARYVC VWKVG E+
Sbjct: 218 EVLAHPAVGFFITHSGWNSTVEAVSEGVPMICLPLHGDQFSNARYVCDVWKVGVEI 385
>gb|CA630327.1|CA630327 wle1n.pk0032.d11 wle1n Triticum aestivum cDNA clone
wle1n.pk0032.d11 5' end, mRNA sequence
Length = 508
Score = 91.8 bits (194), Expect(3) = 8e-025
Identities = 34/41 (82%), Positives = 36/41 (87%)
Frame = -2 / +1
Query: 648 GWNSTVEAVSEGVPMICHPRHGDQYGNARYVCHVWKVGTEV 526
GWNSTVEAVSEGVPMIC P HGDQ+ NARYVC VWKVG E+
Sbjct: 4 GWNSTVEAVSEGVPMICLPLHGDQFSNARYVCDVWKVGMEI 126
Score = 33.1 bits (66), Expect(3) = 8e-025
Identities = 13/18 (72%), Positives = 14/18 (77%)
Frame = -3 / +2
Query: 533 RRSPGTSWREGRSRPPST 480
RR G +WREGRSR PST
Sbjct: 134 RRRLGRTWREGRSRLPST 187
Score = 27.2 bits (53), Expect(3) = 8e-025
Identities = 9/19 (47%), Positives = 16/19 (84%)
Frame = -2 / +1
Query: 453 EGIRKRMNELKIAADKGID 397
+GIR+RM+ K+AAD+ ++
Sbjct: 202 KGIRERMDAFKLAADEAVN 258
>gb|BG313174.1|BG313174 WHE2054_F07_L14ZS Wheat salt-stressed sheath cDNA library Triticum
aestivum cDNA clone WHE2054_F07_L14, mRNA sequence
Length = 376
Score = 71.6 bits (150), Expect(3) = 1e-024
Identities = 27/31 (87%), Positives = 29/31 (93%)
Frame = -2 / +3
Query: 693 EVLAHPAVGGFFTHCGWNSTVEAVSEGVPMI 601
EVLAHPAVG FFTH GWNSTVEA++EGVPMI
Sbjct: 150 EVLAHPAVGAFFTHSGWNSTVEAIAEGVPMI 242
Score = 53.8 bits (111), Expect(3) = 1e-024
Identities = 20/25 (80%), Positives = 20/25 (80%)
Frame = -2 / +2
Query: 594 PRHGDQYGNARYVCHVWKVGTEVAG 520
P HGDQYGNARYV VWKVG EV G
Sbjct: 248 PLHGDQYGNARYVADVWKVGVEVDG 322
Score = 25.8 bits (50), Expect(3) = 1e-024
Identities = 10/15 (66%), Positives = 13/15 (86%)
Frame = -2 / +2
Query: 516 QLERGEIKAAIDRLM 472
+LER IKAAI+R+M
Sbjct: 329 RLERASIKAAIERMM 373
>gb|BQ483975.1|BQ483975 WHE3515_A05_B09ZS Wheat unstressed root cDNA library Triticum
aestivum cDNA clone WHE3515_A05_B09, mRNA sequence
Length = 545
Score = 112 bits (239), Expect = 5e-024
Identities = 42/49 (85%), Positives = 44/49 (89%)
Frame = -2 / +2
Query: 693 EVLAHPAVGGFFTHCGWNSTVEAVSEGVPMICHPRHGDQYGNARYVCHV 547
EVLAHPAVG FFTH GWNSTVEA++EGVPMICHP HGDQYGNARYV V
Sbjct: 398 EVLAHPAVGAFFTHSGWNSTVEAIAEGVPMICHPLHGDQYGNARYVADV 544
>gb|BE405606.1|BE405606 WHE1209_C09_E17ZS Wheat etiolated seedling root cDNA library
Triticum aestivum cDNA clone WHE1209_C09_E17, mRNA
sequence
Length = 634
Score = 111 bits (236), Expect = 1e-023
Identities = 42/50 (84%), Positives = 43/50 (86%)
Frame = -2 / +2
Query: 693 EVLAHPAVGGFFTHCGWNSTVEAVSEGVPMICHPRHGDQYGNARYVCHVW 544
EVLAHPAVG F TH GWNSTVEAVSEGVPMIC P HGDQ+ NARYVC VW
Sbjct: 485 EVLAHPAVGAFITHSGWNSTVEAVSEGVPMICLPLHGDQFSNARYVCDVW 634
>gb|BJ284242.1|BJ284242 BJ284242 Y. Ogihara unpublished cDNA library, Wh_r Triticum
aestivum cDNA clone whr1k09 3', mRNA sequence
Length = 717
Score = 108 bits (230), Expect = 8e-023
Identities = 44/104 (42%), Positives = 62/104 (59%)
Frame = -2 / -1
Query: 693 EVLAHPAVGGFFTHCGWNSTVEAVSEGVPMICHPRHGDQYGNARYVCHVWKVGTEVAGDQ 514
+VL HPAVG F THCGWNST+E V G+PM+C P DQ+ N Y+C +W+VG VA +
Sbjct: 402 QVLGHPAVGCFVTHCGWNSTLEGVRNGLPMLCWPYFTDQFTNQTYICDIWRVGLRVASAE 223
Query: 513 LERGEIKAAIDRLMGGSEEGEGIRKRMNELKIAADKGIDESAGS 382
+K + L+ E EG ++R+ LK A+K + + S
Sbjct: 222 GGGLVMKERVVELLDRIFEDEGAKERVLRLKEMAEKNMSDEGQS 91
>gb|CA615835.1|CA615835 wr1.pk169.d2 wr1 Triticum aestivum cDNA clone wr1.pk169.d2 5' end,
mRNA sequence
Length = 521
Score = 88.6 bits (187), Expect(3) = 2e-022
Identities = 34/40 (85%), Positives = 35/40 (87%)
Frame = -2 / +2
Query: 693 EVLAHPAVGGFFTHCGWNSTVEAVSEGVPMICHPRHGDQY 574
EVLAHPAVG F TH GWNSTVEAVSEGVPMIC P HGDQ+
Sbjct: 65 EVLAHPAVGAFITHSGWNSTVEAVSEGVPMICLPLHGDQF 184
Score = 35.4 bits (71), Expect(3) = 2e-022
Identities = 12/15 (80%), Positives = 13/15 (86%)
Frame = -2 / +3
Query: 570 NARYVCHVWKVGTEV 526
NARYVC VWKVG E+
Sbjct: 189 NARYVCDVWKVGMEI 233
Score = 21.7 bits (41), Expect(3) = 2e-022
Identities = 8/14 (57%), Positives = 12/14 (85%)
Frame = -2 / +2
Query: 513 LERGEIKAAIDRLM 472
LERG +KAAI +++
Sbjct: 260 LERGRLKAAIRQIV 301
>gb|CV765720.1|CV765720 FGAS060107 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 851
Score = 70.7 bits (148), Expect(2) = 2e-022
Identities = 24/30 (80%), Positives = 27/30 (90%)
Frame = -2 / +3
Query: 624 VSEGVPMICHPRHGDQYGNARYVCHVWKVG 535
++EGVPMICHP HGDQYGNARYV +WKVG
Sbjct: 708 IAEGVPMICHPLHGDQYGNARYVAELWKVG 797
Score = 55.6 bits (115), Expect(2) = 2e-022
Identities = 21/23 (91%), Positives = 21/23 (91%)
Frame = -2 / +2
Query: 693 EVLAHPAVGGFFTHCGWNSTVEA 625
EVLAHPAVG FFTH GWNSTVEA
Sbjct: 638 EVLAHPAVGAFFTHSGWNSTVEA 706
>gb|BQ743938.1|BQ743938 WHE4109_H10_O19ZS Wheat salt-stressed root cDNA library Triticum
aestivum cDNA clone WHE4109_H10_O19, mRNA sequence
Length = 656
Score = 105 bits (225), Expect = 4e-022
Identities = 41/49 (83%), Positives = 42/49 (85%)
Frame = -2 / +1
Query: 693 EVLAHPAVGGFFTHCGWNSTVEAVSEGVPMICHPRHGDQYGNARYVCHV 547
EVLAHPAVG F TH GWNSTVEAVSEGVPMIC P HGDQ+ NARYVC V
Sbjct: 508 EVLAHPAVGAFITHSGWNSTVEAVSEGVPMICLPLHGDQFSNARYVCDV 654
>gb|CA700350.1|CA700350 wkm1c.pk005.e20 wkm1c Triticum aestivum cDNA clone wkm1c.pk005.e20
5' end, mRNA sequence
Length = 504
Score = 105 bits (225), Expect = 4e-022
Identities = 39/46 (84%), Positives = 42/46 (91%)
Frame = -2 / +2
Query: 693 EVLAHPAVGGFFTHCGWNSTVEAVSEGVPMICHPRHGDQYGNARYV 556
EVLAHPAVG FFTH GWNSTVEA++EGVPMIC P HGDQYGNA+YV
Sbjct: 335 EVLAHPAVGAFFTHSGWNSTVEAIAEGVPMICQPLHGDQYGNAKYV 472
>gb|CA720605.1|CA720605 wkm2n.pk007.f4 wkm2n Triticum aestivum cDNA clone wkm2n.pk007.f4 5'
end, mRNA sequence
Length = 342
Score = 90.9 bits (192), Expect(2) = 1e-021
Identities = 35/44 (79%), Positives = 37/44 (84%)
Frame = -2 / +1
Query: 693 EVLAHPAVGGFFTHCGWNSTVEAVSEGVPMICHPRHGDQYGNAR 562
EVLAHPAVG F TH GWNSTVEAVSEGVPMIC P HGD + NA+
Sbjct: 115 EVLAHPAVGAFITHSGWNSTVEAVSEGVPMICLPLHGDXFXNAK 246
Score = 32.7 bits (65), Expect(2) = 1e-021
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = -2 / +2
Query: 564 RYVCHVWKVGTEV 526
RY CHVWKVG E+
Sbjct: 245 RYXCHVWKVGMEI 283
>gb|CA604032.1|CA604032 wr1.pk0033.e10 wr1 Triticum aestivum cDNA clone wr1.pk0033.e10 5'
end, mRNA sequence
Length = 469
Score = 79.4 bits (167), Expect(3) = 3e-021
Identities = 30/37 (81%), Positives = 32/37 (86%)
Frame = -2 / +2
Query: 636 TVEAVSEGVPMICHPRHGDQYGNARYVCHVWKVGTEV 526
TVEAVSEGVPMIC P HGDQ+ NARYVC VWKVG E+
Sbjct: 2 TVEAVSEGVPMICLPLHGDQFSNARYVCDVWKVGMEI 112
Score = 33.1 bits (66), Expect(3) = 3e-021
Identities = 13/18 (72%), Positives = 14/18 (77%)
Frame = -3 / +3
Query: 533 RRSPGTSWREGRSRPPST 480
RR G +WREGRSR PST
Sbjct: 120 RRRLGRTWREGRSRLPST 173
Score = 27.2 bits (53), Expect(3) = 3e-021
Identities = 9/19 (47%), Positives = 16/19 (84%)
Frame = -2 / +2
Query: 453 EGIRKRMNELKIAADKGID 397
+GIR+RM+ K+AAD+ ++
Sbjct: 188 KGIRERMDAFKLAADEAVN 244
>gb|BE428405.1|BE428405 MTD006.F09F990616 ITEC MTD Durum Wheat Root Library Triticum
turgidum subsp. durum cDNA clone MTD006.F09, mRNA
sequence
Length = 397
Score = 91.3 bits (193), Expect(2) = 9e-021
Identities = 35/57 (61%), Positives = 41/57 (71%)
Frame = -2 / +2
Query: 690 VLAHPAVGGFFTHCGWNSTVEAVSEGVPMICHPRHGDQYGNARYVCHVWKVGTEVAG 520
+L HPAVGGF THCGWNST+EAVS GVPM+ PR+ DQ N + V V +VG V G
Sbjct: 113 ILDHPAVGGFLTHCGWNSTLEAVSAGVPMVTWPRYADQLHNEQLVVEVLRVGVSVTG 283
Score = 29.5 bits (58), Expect(2) = 9e-021
Identities = 12/24 (50%), Positives = 17/24 (70%)
Frame = -2 / +2
Query: 498 IKAAIDRLMGGSEEGEGIRKRMNE 427
I +I RLMG SEEG+ IR++ +
Sbjct: 326 IAESIVRLMGDSEEGDAIREKARD 397
Database: Triticum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 3:01 PM
Number of letters in database: 367,240,239
Number of sequences in database: 636,343
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 532,884,712
Number of Sequences: 636343
Number of extensions: 7809825
Number of successful extensions: 227132
Number of sequences better than 1.0e-020: 41
length of database: 122,413,413
effective HSP length: 53
effective length of database: 88,687,234
effective search space used: 15697640418
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)