TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2441276.2.1
(1796 letters)
Database: Triticum_nucl_with_EST.fasta
636,343 sequences; 367,240,239 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AY376128.1| Triticum aestivum ETTIN-like auxin response ... 364 e-175
gb|AY376129.1| Triticum aestivum ETTIN-like auxin response ... 264 e-121
gb|CA735236.1|CA735236 wpi1s.pk003.n4 wpi1s Triticum aestiv... 217 3e-055
gb|CV764620.1|CV764620 FGAS059005 Triticum aestivum FGAS: L... 71 1e-048
gb|AY376130.1| Triticum aestivum ETTIN-like auxin response ... 95 7e-045
gb|BQ241700.1|BQ241700 TaE05001H09R TaE05 Triticum aestivum... 94 2e-031
gb|CA498059.1|CA498059 WHE3237_G05_M09ZT Wheat meiotic anth... 100 2e-031
gb|BG907022.1|BG907022 TaLr1156E09R TaLr1 Triticum aestivum... 94 2e-031
gb|BG907523.1|BG907523 TaLr1160F10R TaLr1 Triticum aestivum... 94 2e-031
gb|CA733774.1|CA733774 wlp1c.pk006.j21 wlp1c Triticum aesti... 93 5e-031
gb|CV770790.1|CV770790 FGAS065183 Triticum aestivum FGAS: L... 53 8e-029
gb|CA500766.1|CA500766 WHE4024_D06_H12ZT Wheat meiotic anth... 119 1e-027
gb|BJ304916.1|BJ304916 BJ304916 Y. Ogihara unpublished cDNA... 82 2e-027
gb|CB307104.1|CB307104 HFIG089 Hessian fly infested cDNA li... 67 2e-027
gb|CV782429.1|CV782429 FGAS076842 Triticum aestivum FGAS: L... 119 8e-026
gb|CA502175.1|CA502175 WHE4043_G07_N13ZT Wheat meiotic anth... 71 4e-025
gb|CV767919.1|CV767919 FGAS062310 Triticum aestivum FGAS: L... 94 1e-024
gb|CA501261.1|CA501261 WHE4031_D07_H13ZT Wheat meiotic anth... 94 2e-024
gb|BF292952.1|BF292952 WHE2166_G07_N14ZS Triticum turgidum ... 94 4e-023
gb|CD918964.1|CD918964 G608.111I19F010911 G608 Triticum aes... 57 1e-022
>gb|AY376128.1| Triticum aestivum ETTIN-like auxin response factor (ETT1-alpha) mRNA,
partial cds
Length = 2256
Score = 364 bits (790), Expect(5) = e-151
Identities = 168/239 (70%), Positives = 183/239 (76%)
Frame = +3 / -1
Query: 1080 PGIMLLASLEQLRSSMYCMFVASHG*EVATAALS*VL*PSNS*PCKTLWNWADSAKSGRP 1259
P +LL LEQ RSSMYC F+ASHG EVATA S*VL*P+NS*PCKTL ADSAKSGRP
Sbjct: 1236 PRTLLLPLLEQPRSSMYCKFLASHGCEVATAVPS*VL*PNNS*PCKTLRTCADSAKSGRP 1057
Query: 1260 LPFGTR*SGLTWGRHGFSLFAFGADM*DPETELVSSISQGEILFG*RKSTSSSHRTIKHF 1439
P GT SGL WGR+GF F GA DPE ELVSSISQG+ LFG R S SSSH T +HF
Sbjct: 1056 PPCGTVNSGLAWGRYGFIRFEVGAARWDPEAELVSSISQGDTLFGRRNSPSSSHLTSRHF 877
Query: 1440 HFEPRHMGSASPIPAMIPVHLLSEASSLSYLTLNLEPAENG*LKLLINFENGIMNSDWLN 1619
HFEPRH+GSASP+P +IPV+LLS ASSLSYL LNL+P ENG*LKLL+NF+ G MNSD LN
Sbjct: 876 HFEPRHIGSASPVPVIIPVYLLSAASSLSYLILNLDPTENG*LKLLVNFQ*GTMNSD*LN 697
Query: 1620 LGL**MWNTLLVATACATLGSEPRFEHWL*RAGKADPFLS*AARRTXXXXXXXXXXKNS 1796
LGL* +WN L VATA ATL S PRFEHWL* AGKADPFLS* ARRT +NS
Sbjct: 696 LGL*KIWNMLFVATA*ATLASVPRFEHWL*SAGKADPFLS*TARRTPSLSSPSSPRRNS 520
Score = 315 bits (683), Expect(6) = e-175
Identities = 121/157 (77%), Positives = 138/157 (87%)
Frame = -2 / +2
Query: 1549 GSRFKVRYESDDASERRCTGIIAGIGDADPMWRGSKWKCLMVRWDDDVDFRQPNRISPWE 1370
GSRFK+RYES+DA+ERR TGII G GDADPMWRGSKWKCL+VRWDDD +FR+PNR+SPWE
Sbjct: 767 GSRFKMRYESEDAAERRYTGIITGTGDADPMWRGSKWKCLLVRWDDDGEFRRPNRVSPWE 946
Query: 1369 IELTSSVSGSHMSAPNAKRLKPCLPHVNPDYLVPNGSGRPDFAESAQFHKVLQGQELLGY 1190
IELTSS SGSH++AP +KR+KP LPH NP++ VP+G GRPDFAESAQ KVLQGQELLGY
Sbjct: 947 IELTSSASGSHLAAPTSKRMKPYLPHANPEFTVPHGGGRPDFAESAQVRKVLQGQELLGY 1126
Query: 1189 RTHDNAAVATSQPCEATNMQYIDERSCSNDASNIIPG 1079
RTHD AVATSQPCEA N+QYIDER CSN+ SN + G
Sbjct: 1127 RTHDGTAVATSQPCEARNLQYIDERGCSNNGSNNVLG 1237
Score = 312 bits (676), Expect(6) = e-127
Identities = 151/243 (62%), Positives = 163/243 (67%)
Frame = +1 / -2
Query: 1063 HQFLEPPG*CYSHRWSNFVHQCTACSLLRMAEKLQQQHCHEFYNPVILDLARPCGIGQIP 1242
H P G CYSH SN VH+CTA LL MA K QQQ+ HEFYNP+ILDLARPCG+ Q
Sbjct: 1253 HGLGPPLGHCYSHC*SNLVHRCTASFLLHMAVK*QQQYHHEFYNPIILDLARPCGLVQTQ 1074
Query: 1243 QNQDDRFHLELGSLD*HGEDMVSVSLHLVQTCEILKLN*SAQSPKEKSCLVDENLHRHPI 1422
QNQ D H+EL D*HGE M S +L LV+ ILKLN SAQSPKE CLVDE H HP
Sbjct: 1073 QNQGDHLHVEL*IPD*HGEGMASSALKLVRPDGILKLNWSAQSPKEIPCLVDETHHHHPT 894
Query: 1423 GPSNISISNHATWGQHHQFLL*SLCIFFQKHHRSHISL*TSNQQKMVD*SS**TSKMV** 1602
P+ IS NHAT G HHQF SLC FFQ+H HIS *TS QQKMVD*S *TS V *
Sbjct: 893 LPAGISTLNHAT*GLHHQFQ*LSLCTFFQQHPHFHISF*TSIQQKMVD*SFW*TSSRVR* 714
Query: 1603 IQIGLIWGCSRCGTHFWWPQHVQH*VVNQDLSTGYKELEKQIHF*AELHGALQVLAPHYH 1782
IQI L WG R GT PQH QH*+V QD S GYK EKQIHF*AE HG L APH
Sbjct: 713 IQIDLTWGYRRSGTCSL*PQHEQH*LVYQDSSIGYKAPEKQIHF*AEPHGVLPA*APHRR 534
Query: 1783 PSK 1791
P++
Sbjct: 533 PAE 525
Score = 309 bits (669), Expect(3) = e-115
Identities = 143/238 (60%), Positives = 166/238 (69%)
Frame = +2 / -3
Query: 1079 PRDNVTRIVGATSFINVLHVRCFAWLRSCNSSIVMSSITQ*FLTLQDLVELGRFRKIRTT 1258
P D VT IV ATSFI+VL V CF WL S NSS +MSSITQ*FLTLQDL +L R KIR T
Sbjct: 1237 P*DIVTPIVRATSFIDVLQVSCFTWL*SSNSSTIMSSITQ*FLTLQDLADLCRLSKIRAT 1058
Query: 1259 ASIWN*VVWINMGKTWFQSLCIWCRHVRS*N*TSQLNLPRRNPVWLTKIYIVIPSDHQTF 1438
S+WN I+MGK W L WC + S*+*T QLNLPRR PVW TK+ I+IP Q F
Sbjct: 1057 TSMWNCEFRISMGKVWLHPL*SWCGQMGS*S*TGQLNLPRRYPVWSTKLTIIIPPYQQAF 878
Query: 1439 PFRTTPHGVSITNSCYDPCASSFRSIIALISHFEPRTSRKWLTEALDKLRKWYNEFRLA* 1618
P TTPH V IT+S PC SF SI+ ISHFEPR++RKWLT+A +L Y+EFRL *
Sbjct: 877 PL*TTPHRVCITSSSNYPCVPSFSSILTFISHFEPRSNRKWLTKAFGELPVGYDEFRLT* 698
Query: 1619 SGVVVDVEHTFGGHSMCNIR**TKI*ALVIKSWKSRSIFKLSCTAHSKS*LPIITPQK 1792
GV+ D+EH HSM NI * TKI AL IK KSRSIF+L+ TA+S+ LPI+ PQK
Sbjct: 697 PGVIEDLEHALCSHSMSNIS*CTKIRALAIKRRKSRSIFELNRTAYSQPKLPIVAPQK 524
Score = 297 bits (644), Expect(4) = e-117
Identities = 142/240 (59%), Positives = 172/240 (71%)
Frame = -1 / +1
Query: 1796 TIFEG**WGAKTWSAPCSSA*KWICFSSSL*PVLKSWFTT*CCTCCGHQKCVPHLLQPQI 1617
T+ G WGA S PC SA KWICFS +L*P+L+SW+T+*CC+CCG+++ VP LL PQ+
Sbjct: 520 TVSAGRRWGA*AGSTPCGSAQKWICFSGAL*PMLESWYTS*CCSCCGYKEHVPDLL*PQV 699
Query: 1616 KPI*IHYTIFEVYQELQSTIFCWFEVQSEI*ER*CF*KKMHRDHSRNW*C*PHVAWFEME 1437
K I*IH T+ EV+Q+L STIFCW EVQ+EI*+ C *KK+HRD+ NW*C P+VAWF++E
Sbjct: 700 KSI*IHRTLLEVHQKL*STIFCWIEVQNEI*K*GCC*KKVHRDNYWNW*CRPYVAWFKVE 879
Query: 1436 MFDGPMG*RCRFSSTKQDFSLGD*AD*FSFRISHVCTKCKETETMSSPC*SRLPSSKWKR 1257
M G +G* SSTKQ SLGD*AD FSFRI T K E + SPC*S + SS W+
Sbjct: 880 MPAGKVG**W*VSSTKQGISLGD*ADQFSFRIPSGRTNFKADEAIPSPC*SGIHSSTWRW 1059
Query: 1256 SS*FCGICPIPQGLARSRITGL*NS*QXXXCNFSAMRSNEHAVH**TKLLQRCE*HYPGG 1077
S *FC +C PQGLARSRI GL*NS* C F+AM S + AVH *T+LL + E* P G
Sbjct: 1060 SP*FC*VCTSPQGLARSRIIGL*NS*WYCCCYFTAM*SKKLAVHR*TRLL*QWE*QCPRG 1239
Score = 288 bits (624), Expect(4) = e-103
Identities = 142/238 (59%), Positives = 160/238 (67%)
Frame = -3 / +3
Query: 1791 F*GVIMGS*DLECAVQLSLKMDLLFQLFITSAQILVHYLMLHMLWPPKVCSTSTTTPD*A 1612
F G MGS E AV+ S KMDLLF+ FI +A+ILVH LML MLW + CS S+ TP *
Sbjct: 525 FCGATMGSLGWEYAVRFSSKMDLLFRRFIANARILVH*LMLLMLWLQRACSRSSITPG*V 704
Query: 1611 NLNSLYHFRSLSRASVNHFLLVRGSK*DMRAMMLLKEDAQGS*QELVMLTPCGVVRNGNV 1432
NLNS Y S +A VNHFLL RGSK*DM+ MLLKE QG ELVM T CGVV++GN
Sbjct: 705 NLNSSYPTGSSPKALVNHFLLDRGSK*DMKVRMLLKEGTQG*LLELVMQTLCGVVQSGNA 884
Query: 1431 *WSDGMTM*IFVNQTGFLLGRLS*LVQFQDLTCLHQMQRD*NHVFPMLIQTT*FQMEAVV 1252
W GM M FV+QTG+LLGRLS* VQ QD HQ+Q *+H FPMLI+ + F ME V
Sbjct: 885 CW*GGMMMVSFVDQTGYLLGRLS*PVQLQDPIWPHQLQSG*SHTFPMLIRNSQFHMEVVA 1064
Query: 1251 LILRNLPNSTRSCKVKNYWVIEXXXXXXXXXLSHAKQRTCSTLMNEVAPTMRVTLSRG 1078
LIL +L S RSCKVKNYWVIE SH KQ TCST MNEVA TM VT+S G
Sbjct: 1065 LILLSLHKSARSCKVKNYWVIELMMVLLLLLHSHVKQETCSTSMNEVALTMGVTMS*G 1238
Score = 131 bits (281), Expect(6) = e-175
Identities = 54/62 (87%), Positives = 59/62 (95%)
Frame = -2 / +2
Query: 1795 LFLRGDNGELRLGVRRAAQLKNGSAFPALYNQCSNLGSLPNVAHAVATKSVFHIYYNPRL 1616
LFLRGD+GELRLGVRRA QLKNGSAFPALY+QCSNLG+L NVAHAVATKS+F I+YNPRL
Sbjct: 521 LFLRGDDGELRLGVRRAVQLKNGSAFPALYSQCSNLGTLANVAHAVATKSMFQIFYNPRL 700
Query: 1615 SQ 1610
SQ
Sbjct: 701 SQ 706
Score = 113 bits (242), Expect(6) = e-175
Identities = 49/64 (76%), Positives = 49/64 (76%)
Frame = -2 / +2
Query: 550 NSCKIFGISLTEKVPAMKEKGCGDINTNYPSPFLSLKQQVPKSLGNSCATVHEQRPVVAR 371
NSCKIFGISL EKV A E GC D NYPS LKQQVPKSLGNSCATVHEQRPVV R
Sbjct: 1733 NSCKIFGISLAEKVRARDEMGCDDGGANYPSSTQPLKQQVPKSLGNSCATVHEQRPVVGR 1912
Query: 370 VIDV 359
IDV
Sbjct: 1913 AIDV 1924
Score = 101 bits (216), Expect(6) = e-175
Identities = 47/84 (55%), Positives = 58/84 (69%)
Frame = -3 / +3
Query: 1041 LGFPTVAQALGSLQDSKRSCKVKKYFIPTEELWSMQA*VIVASISKMVLMCLLRPASGTH 862
L FPT+A ALGSL+DSKRSCKVKK+ + TEE+W M+A* + A ISKMVLM LL +G H
Sbjct: 1269 LEFPTIALALGSLRDSKRSCKVKKFSVRTEEVWLMRA*EVAAFISKMVLMHLLYWINGAH 1448
Query: 861 SYMDVLFVANKHQLFHLNPHPHHL 790
+ L ++HQ LN HHL
Sbjct: 1449 NNSMHLVSGHQHQFCRLNHRYHHL 1520
Score = 99.6 bits (211), Expect(4) = e-117
Identities = 38/57 (66%), Positives = 42/57 (73%)
Frame = -2 / +2
Query: 1030 YRCSGFGESPRFQKVLQGQEVFHPYRGTLVDASLSNSGFHQQDGSHVPTQASKWHAQ 860
Y CSGFGES RFQKVLQGQEVF PYRG+LVDA + + GFHQQDG + KW Q
Sbjct: 1280 YHCSGFGESQRFQKVLQGQEVFRPYRGSLVDARMRSGGFHQQDGPYASALLDKWRTQ 1450
Score = 92.7 bits (196), Expect(5) = e-151
Identities = 41/60 (68%), Positives = 45/60 (75%)
Frame = +3 / -1
Query: 360 TSITLATTGLCS*TVAQLLPSDFGTCCFKDRKGDG*LVLMSPQPFSFIAGTFSVKDMPNI 539
TSI L TTGLCS*TVAQLLP DFGTCCF+ DG*L S QP S +A TFS ++MPNI
Sbjct: 1923 TSIALPTTGLCS*TVAQLLPRDFGTCCFRG*VEDG*LAPPSSQPISSLARTFSAREMPNI 1744
Score = 82.6 bits (174), Expect(6) = e-127
Identities = 35/64 (54%), Positives = 42/64 (65%)
Frame = +2 / -3
Query: 359 NVNHPSNNRPLLMNGGTAVAQRFRHLLLQRQEGGWIVGVDVTTALFFHCWNLLGQRYAKY 538
+V+ P++NRPLLMN GT VA+ FRHLLLQ WIVG + T C NL QR AKY
Sbjct: 1924 DVDRPADNRPLLMNSGTTVAEGFRHLLLQGLS*RWIVGTTIITTHLIPCPNLFSQRNAKY 1745
Query: 539 FATV 550
AT+
Sbjct: 1744 LATI 1733
Score = 81.7 bits (172), Expect(5) = e-151
Identities = 39/76 (51%), Positives = 50/76 (65%)
Frame = +1 / -2
Query: 808 IEMEQLVLVGHEKHIHVAVRATCWPE*AHENHLADGSHYYSSLHRPEFLCRDEILLDLAR 987
+E +LVL+ + V V A E H++HLAD S ++S H+P+FL D LLDLAR
Sbjct: 1502 VETAELVLMTRNQMHAVVVCAIYPIEQMHKDHLADESRHFSCAHQPDFLGTDGKLLDLAR 1323
Query: 988 PFGILETPQSLSNGRK 1035
PFGI ETPQS SNGR+
Sbjct: 1322 PFGISETPQSQSNGRE 1275
Score = 79.9 bits (168), Expect(6) = e-127
Identities = 38/63 (60%), Positives = 40/63 (63%)
Frame = +3 / -1
Query: 837 PRKAHPCSCACHLLA*VGT*EPSC*WKPLLLKLASTRVPL*G*NTS*PCKTFWNLGDSPK 1016
P+ C C HL * PSC* KP LL ASTR+P G TS*PCKTFWNL DSPK
Sbjct: 1473 PKPNACCCCVRHLSNRADA*GPSC**KPPLLMRASTRLPRYGRKTS*PCKTFWNL*DSPK 1294
Query: 1017 PEQ 1025
PEQ
Sbjct: 1293 PEQ 1285
Score = 79.0 bits (166), Expect(3) = e-115
Identities = 42/84 (50%), Positives = 51/84 (60%)
Frame = +2 / -3
Query: 791 RWWG*GLRWNSWCLLATKSTSM*LCVPLAGLSRHMRTILLMEATITQACIDQSSSVGMKY 970
RW LR +WC + LC P SR +RTILLM+A + A I+Q+SSV +
Sbjct: 1519 RW**RWLRRQNWC**PETKCMLLLCAPFIQ*SRCIRTILLMKAATSHARINQTSSVRTEN 1340
Query: 971 FLTLQDLLESWRLPKA*ATVGKPR 1042
FLTLQDLLES RLPKA A VG +
Sbjct: 1339 FLTLQDLLESLRLPKARAMVGNSK 1268
Score = 78.0 bits (164), Expect(3) = e-115
Identities = 33/62 (53%), Positives = 42/62 (67%)
Frame = +1 / -2
Query: 352 LLKRQSP*QQQASAHERWHSCCPAISALVASKTGRGMDSWC*CHHSPFLSLLEPSRSKIC 531
++ R+SP +QQASAHE+WH+CC ISAL AS MDSW HH+P L EP + + C
Sbjct: 1931 IVGRRSPCRQQASAHEQWHNCCRGISALAASGAELKMDSWHHHHHNPSHPLPEPFQPEKC 1752
Query: 532 QI 537
QI
Sbjct: 1751 QI 1746
Score = 75.8 bits (159), Expect(4) = e-103
Identities = 40/79 (50%), Positives = 48/79 (60%)
Frame = -1 / +1
Query: 1031 LPLLRLWGVSKIPKGLARSRSISSLQRNSGRCKLE**WLPSARWFSCAYSGQQVARTATW 852
LPLL LWGVS+IPKGLARSRS S+ R SG C E L SARW C S +A T T
Sbjct: 1279 LPLLWLWGVSEIPKGLARSRSFPSVPRKSG*CAHEKWRLSSARWSLCICSIG*MAHTTTA 1458
Query: 851 MCFSWPTSTSCSISILIPT 795
+ STS ++S ++ T
Sbjct: 1459 CIWFRVISTSSAVSTIVIT 1515
Score = 61.6 bits (128), Expect(4) = e-117
Identities = 35/62 (56%), Positives = 37/62 (59%)
Frame = -1 / +1
Query: 545 LQNIWHIFDREGSSNERKGLW*HQHQLSIPLPVFEATSAEIAGQQLCHRS*AEACCC*GD 366
LQ+IWH +GS GL * QLSI EA SAEI QQLCH S*AEACC GD
Sbjct: 1738 LQDIWHFSG*KGSGKG*DGL**WWCQLSIFNSAPEAASAEIPRQQLCHCS*AEACCRQGD 1917
Query: 365 *R 360
R
Sbjct: 1918 RR 1923
Score = 55.1 bits (114), Expect(4) = e-103
Identities = 28/53 (52%), Positives = 34/53 (64%)
Frame = -3 / +3
Query: 546 VAKYLAYL*PRRFQQ*KKRAVVTSTPTIHPPSCL*SNKCRNRWATAVPPFMSR 388
VA+YLA+L +RF Q + V+ PTIH *S+KCRN AT VP FMSR
Sbjct: 1737 VARYLAFLWLKRFGQGMRWVVMMVVPTIHLQLSP*SSKCRNPSATVVPLFMSR 1895
Score = 44.1 bits (90), Expect(6) = e-175
Identities = 17/25 (68%), Positives = 20/25 (80%)
Frame = -2 / +2
Query: 787 LMFQRGDPKMSPFEFGHFHLNKNED 713
LMFQ+ DPK+S FEFG HL+KN D
Sbjct: 1526 LMFQQADPKVSRFEFGQGHLDKNMD 1600
Score = 44.1 bits (90), Expect(5) = e-151
Identities = 26/73 (35%), Positives = 32/73 (43%)
Frame = +2 / -3
Query: 581 GNSGMRFLNGHISVSRSSRNMMSLEHRRLLSSSDASSMDKHCASILVLIQVEMPKFKWGH 760
G LN + S+ M R L S+ S I VLIQV +PK +
Sbjct: 1732 GRCNTLVLNCNTSIDHF*TKMRPERQRLLSPSNGFSGDKPSIRIIHVLIQVPLPKLESRD 1553
Query: 761 LWITSLKHQDRWW 799
LWI+ LKHQ R W
Sbjct: 1552 LWISLLKHQHRRW 1514
Score = 38.2 bits (77), Expect(4) = e-117
Identities = 21/52 (40%), Positives = 30/52 (57%)
Frame = -1 / +1
Query: 863 TATWMCFSWPTSTSCSISILIPTICPDVSTR*SKDVPI*IWAFPLE*ERG*T 708
T + F +++S +I+I T C DVS *SK + I +WA L *E G*+
Sbjct: 1450 TTACIWFRVISTSSAVSTIVITTFCADVSAG*SKGLSIRVWARALG*EHG*S 1605
Score = 33.6 bits (67), Expect(6) = e-127
Identities = 15/24 (62%), Positives = 16/24 (66%)
Frame = +3 / -1
Query: 714 SSFLFKWKCPNSNGDIFGSPR*NI 785
S FL K CPNSN + FGS *NI
Sbjct: 1599 SMFLSKCPCPNSNRETFGSAC*NI 1528
Score = 32.2 bits (64), Expect(5) = e-151
Identities = 14/22 (63%), Positives = 15/22 (68%)
Frame = +3 / -1
Query: 1041 GLPSGVLTPILGTPGIMLLASL 1106
G+PSGV TP LGTP LL L
Sbjct: 1278 GIPSGVFTPWLGTPPRTLLLPL 1213
Score = 28.6 bits (56), Expect(4) = e-103
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = -3 / +3
Query: 798 HHLS*CFNEVIQRCPHLNLGIST*IRT 718
H L *CF+ +IQR +LG T IRT
Sbjct: 1515 HLLC*CFSRLIQRSLDSSLGKGTWIRT 1595
Score = 26.7 bits (52), Expect(6) = e-175
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = -1 / +1
Query: 1082 GGSKNWCQNTT 1050
GG K WC+NTT
Sbjct: 1237 GGPKPWCENTT 1269
Score = 23.5 bits (45), Expect(6) = e-127
Identities = 6/12 (50%), Positives = 9/12 (75%)
Frame = +2 / -3
Query: 1046 SEWCSDTNSWNP 1081
S+WC T +W+P
Sbjct: 1273 SKWCFHTMAWDP 1238
Score = 22.1 bits (42), Expect(6) = e-127
Identities = 11/19 (57%), Positives = 12/19 (63%)
Frame = +3 / -1
Query: 663 VCSVPPMPPAWTNIARLSS 719
VCS PM A TN+A SS
Sbjct: 1653 VCSPLPMASAETNLAYGSS 1597
>gb|AY376129.1| Triticum aestivum ETTIN-like auxin response factor (ETT2-alpha) mRNA,
partial cds
Length = 2372
Score = 264 bits (570), Expect(4) = 1e-097
Identities = 126/201 (62%), Positives = 137/201 (68%)
Frame = +3 / -3
Query: 1194 PSNS*PCKTLWNWADSAKSGRPLPFGTR*SGLTWGRHGFSLFAFGADM*DPETELVSSIS 1373
P+NS*PCKTLWN ADSAKS LP G+ SGLTWGRHGFS F +G D *DPET+ SSIS
Sbjct: 1155 PNNS*PCKTLWNLADSAKSEETLPLGSNMSGLTWGRHGFSRFEWGEDR*DPETDPASSIS 976
Query: 1374 QGEILFG*RKSTSSSHRTIKHFHFEPRHMGSASPIPAMIPVHLLSEASSLSYLTLNLEPA 1553
QG+ L R STSSSH T KHFHFEP S S +P +IPV LLSEASS SY LNL P
Sbjct: 975 QGDTLLRRRHSTSSSHLTTKHFHFEPCDFRSDSLLPVIIPVDLLSEASSFSYFILNLIPT 796
Query: 1554 ENG*LKLLINFENGIMNSDWLNLGL**MWNTLLVATACATLGSEPRFEHWL*RAGKADPF 1733
E G*LKLL+NF+ G MNSD NLGL**M L +ATA ATL R E WL AGK D F
Sbjct: 795 EKG*LKLLMNFQYGTMNSDSHNLGL**M*KILFIATAWATLPRLRRLESWLKSAGKGDTF 616
Query: 1734 LS*AARRTXXXXXXXXXXKNS 1796
S*AARRT +NS
Sbjct: 615 FS*AARRTPNWSTPSSPRRNS 553
Score = 221 bits (478), Expect(5) = e-121
Identities = 87/137 (63%), Positives = 110/137 (80%)
Frame = -2 / +2
Query: 1549 GSRFKVRYESDDASERRCTGIIAGIGDADPMWRGSKWKCLMVRWDDDVDFRQPNRISPWE 1370
G RFK++YE++DASERR TG+I G ++D GSKWKCL+VRWDDDV+ R+ NR+SPWE
Sbjct: 800 GMRFKMKYENEDASERRSTGMITGSRESDLKSHGSKWKCLVVRWDDDVECRRLNRVSPWE 979
Query: 1369 IELTSSVSGSHMSAPNAKRLKPCLPHVNPDYLVPNGSGRPDFAESAQFHKVLQGQELLGY 1190
IEL SVSGSH+S+P++KRLKPCLP VNPD L+P+GS DFAESA+FHKVLQGQELLG
Sbjct: 980 IELAGSVSGSHLSSPHSKRLKPCLPQVNPDMLLPSGSVSSDFAESARFHKVLQGQELLGS 1159
Query: 1189 RTHDNAAVATSQPCEAT 1139
+ HD + S+ +A+
Sbjct: 1160 KAHDGTVNSASEASQAS 1210
Score = 216 bits (466), Expect(3) = 4e-077
Identities = 111/235 (47%), Positives = 141/235 (60%)
Frame = +2 / -2
Query: 1088 NVTRIVGATSFINVLHVRCFAWLRSCNSSIVMSSITQ*FLTLQDLVELGRFRKIRTTASI 1267
+V R + + + + R LRS +S +M TQ*FLTLQDLVE GRFRKIR S
Sbjct: 1261 HVDRAIPIITVLKISCFRRLRSLRS*INSTIMGFRTQ*FLTLQDLVESGRFRKIRRNTST 1082
Query: 1268 WN*VVWINMGKTWFQSLCIWCRHVRS*N*TSQLNLPRRNPVWLTKIYIVIPSDHQTFPFR 1447
W VWIN+G+ W Q + +RS N +S+ NLPRR P+ T +YI+IPS HQTFP R
Sbjct: 1081 WKQHVWINLGEAWLQPF*MGRGQMRSRNRSSKFNLPRRYPIKATALYIIIPSHHQTFPLR 902
Query: 1448 TTPHGVSITNSCYDPCASSFRSIIALISHFEPRTSRKWLTEALDKLRKWYNEFRLA*SGV 1627
T V ++ Y P SF SI + HF+P ++RK LTEA +L WYNE RL * G+
Sbjct: 901 TMRLQV*LSAPSYHPS*PSF*SIFIFVFHFKPHSNRKRLTEASHELPIWYNELRLT*PGI 722
Query: 1628 VVDVEHTFGGHSMCNIR**TKI*ALVIKSWKSRSIFKLSCTAHSKS*LPIITPQK 1792
VVDV++TF HSM NI TK * LV K K IF LS +AHS+ I T ++
Sbjct: 721 VVDVKNTFHSHSMGNITETTKT*ILVKKCRKRGYIF*LSSSAHSQLEHSIFTSEE 557
Score = 202 bits (436), Expect(6) = 8e-086
Identities = 102/197 (51%), Positives = 121/197 (61%)
Frame = -1 / +1
Query: 1775 WGAKTWSAPCSSA*KWICFSSSL*PVLKSWFTT*CCTCCGHQKCVPHLLQPQIKPI*IHY 1596
W A SAP SA K I FS + *P KS + *CC CCG++K HLLQ Q+ +*+H
Sbjct: 574 WSAPIGSAPSCSAKKCIPFSCTF*PGFKSS*SR*CCPCCGYEKYFSHLLQSQVM*V*VHC 753
Query: 1595 TIFEVYQELQSTIFCWFEVQSEI*ER*CF*KKMHRDHSRNW*C*PHVAWFEMEMFDGPMG 1416
TI EV+++LQST FCW EV +EI + CF KK++ D + P VAWFE+EMF G MG
Sbjct: 754 TILEVHEKLQSTFFCWNEV*NEIRK*RCFRKKVNWDDNWEQRVRPEVAWFEVEMFGGEMG 933
Query: 1415 *RCRFSSTKQDFSLGD*AD*FSFRISHVCTKCKETETMSSPC*SRLPSSKWKRSS*FCGI 1236
* CR S SLGD* F IS V + K E M P *SR +SKWK FCGI
Sbjct: 934 **CRVPSP**GISLGD*TCWIGFGISSVLSPFKTAEAMPPPS*SRHVASKWKCFFGFCGI 1113
Query: 1235 CPIPQGLARSRITGL*N 1185
C IPQGLARSRI G *+
Sbjct: 1114 CQIPQGLARSRIIGF*S 1164
Score = 196 bits (423), Expect(4) = 9e-069
Identities = 110/209 (52%), Positives = 120/209 (57%)
Frame = +1 / -1
Query: 1156 EKLQQQHCHEFYNPVILDLARPCGIGQIPQNQDDRFHLELGSLD*HGEDMVSVSLHLVQT 1335
+KL Q+ H NP+ILDLARPCGI QIPQN FHLE LD* G M S L+ +T
Sbjct: 1193 QKLN*QYHHGL*NPIILDLARPCGIWQIPQNPKKHFHLEATCLD*LGGGMASAVLNGERT 1014
Query: 1336 CEILKLN*SAQSPKEKSCLVDENLHRHPIGPSNISISNHATWGQHHQFLL*SLCIFFQKH 1515
EI K QSPKE D LH HPI P NIS SNHAT G L S FF KH
Sbjct: 1013 DEIPKPIQQVQSPKEIPY*GDGTLHHHPISPPNISTSNHATSGLTLCSQLSSQLTFFLKH 834
Query: 1516 HRSHISL*TSNQQKMVD*SS**TSKMV**IQIGLIWGCSRCGTHFWWPQHVQH*VVNQDL 1695
IS *TS QQK VD*S *TS MV * Q + W CSRC +F PQH QH +DL
Sbjct: 833 LHFRISF*TSFQQKKVD*SFS*TSNMVQ*TQTHITWDCSRCEKYFS*PQHGQHYRDYEDL 654
Query: 1696 STGYKELEKQIHF*AELHGALQVLAPHYH 1782
+ G K EK IHF AE GAL + A H H
Sbjct: 653 NPG*KVQEKGIHFLAEQLGALPIGALHLH 567
Score = 185 bits (399), Expect(3) = 4e-060
Identities = 100/191 (52%), Positives = 120/191 (62%)
Frame = -3 / +3
Query: 1758 ECAVQLSLKMDLLFQLFITSAQILVHYLMLHMLWPPKVCSTSTTTPD*ANLNSLYHFRSL 1579
ECA LS KM LF F+T Q+ V +ML MLW KV TSTT P +L+SLYH S
Sbjct: 591 ECAELLS*KMYPLFLHFLTRIQVFVVSVMLPMLWL*KVFFTSTTIPGYVSLSSLYHIGSS 770
Query: 1578 SRASVNHFLLVRGSK*DMRAMMLLKEDAQGS*QELVMLTPCGVVRNGNV*WSDGMTM*IF 1399
ASVN FLL G K*+ + ML KE G * T +VR+GNV W DGM M*
Sbjct: 771 *EASVNLFLLE*GLK*NTKMKMLQKEGQLG**LGAESQT*SRMVRSGNVWW*DGMMM*SA 950
Query: 1398 VNQTGFLLGRLS*LVQFQDLTCLHQMQRD*NHVFPMLIQTT*FQMEAVVLILRNLPNSTR 1219
V G+LLGRL+ L +F+DL C +Q *+H P LIQT FQ+E + ILRNLP+STR
Sbjct: 951 VALIGYLLGRLNLLDRFRDLICPLPIQNG*SHASPKLIQTCCFQVEVFLRILRNLPDSTR 1130
Query: 1218 SCKVKNYWVIE 1186
SCKVKNYWV++
Sbjct: 1131 SCKVKNYWVLK 1163
Score = 110 bits (234), Expect(5) = e-121
Identities = 47/62 (75%), Positives = 54/62 (87%)
Frame = -2 / +2
Query: 1795 LFLRGDNGELRLGVRRAAQLKNGSAFPALYNQCSNLGSLPNVAHAVATKSVFHIYYNPRL 1616
LFLRG++G L+LGVRRAAQLKN S FPAL+NQ S+L SL NVAHAVA KS+FHIYYNPRL
Sbjct: 554 LFLRGEDGVLQLGVRRAAQLKNVSPFPALFNQDSSLRSLGNVAHAVAMKSIFHIYYNPRL 733
Query: 1615 SQ 1610
+
Sbjct: 734 CE 739
Score = 91.3 bits (193), Expect(5) = e-121
Identities = 40/84 (47%), Positives = 50/84 (59%)
Frame = -2 / +2
Query: 1087 IPGVPRIGVRTPLGSPRFSYRCSGFGESPRFQKVLQGQEVFHPYRGTLVDASLSNSGFHQ 908
IPGVP +G RTP + FSY CSGFGES RFQKVLQGQEVF PY G + ++
Sbjct: 1268 IPGVPGLGARTPPENHGFSYHCSGFGESQRFQKVLQGQEVFGPYEGGTLSDAVIRGSSFC 1447
Query: 907 QDGSHVPTQASKWHAQLHGCAFRG 836
Q + ++A+ GC +RG
Sbjct: 1448 QPDGNYTSRATYKWLMSQGCDYRG 1519
Score = 77.1 bits (162), Expect(6) = 8e-086
Identities = 32/45 (71%), Positives = 36/45 (80%)
Frame = -1 / +1
Query: 1079 GSKNWCQNTTRKP*VFLPLLRLWGVSKIPKGLARSRSISSLQRNS 945
GS+ WC N KP +FLPLLRLWGVSKIPKGLARSRS+ SL R +
Sbjct: 1276 GSRTWC*NPA*KPWIFLPLLRLWGVSKIPKGLARSRSVWSL*RRN 1410
Score = 75.3 bits (158), Expect(4) = 1e-097
Identities = 33/47 (70%), Positives = 35/47 (74%)
Frame = +3 / -3
Query: 951 PL*G*NTS*PCKTFWNLGDSPKPEQR*ENLGLPSGVLTPILGTPGIM 1091
P *G NTS*PCKTFWNL DSPKPEQ *EN GVL P GTPG++
Sbjct: 1404 PS*GPNTS*PCKTFWNL*DSPKPEQW*ENPWFSGGVLAPSPGTPGML 1264
Score = 72.1 bits (151), Expect(3) = 4e-077
Identities = 31/43 (72%), Positives = 35/43 (81%)
Frame = +1 / -1
Query: 952 LCRDEILLDLARPFGILETPQSLSNGRKT*GFRVVF*HQFLEP 1080
L +D+ LLDLARPFGI ETPQSLS+GRK GF+ F*HQ LEP
Sbjct: 1403 LHKDQTLLDLARPFGIFETPQSLSSGRKIHGFQAGF*HQVLEP 1275
Score = 64.8 bits (135), Expect(5) = e-121
Identities = 27/39 (69%), Positives = 31/39 (79%)
Frame = -2 / +2
Query: 445 LKQQVPKSLGNSCATVHEQRPVVARVIDVSTVDMMI*CI 329
LK Q+ KSLGNSCATVHEQRP V V+D+S VD MI* +
Sbjct: 1910 LKPQMSKSLGNSCATVHEQRPAVGMVVDLSAVDTMI*FV 2026
Score = 64.3 bits (134), Expect(3) = 4e-060
Identities = 27/45 (60%), Positives = 34/45 (75%)
Frame = -3 / +3
Query: 1083 RGFQELVSEHHSEALGFPTVAQALGSLQDSKRSCKVKKYFIPTEE 949
+GFQ+LV E + + FPT AQALGSL+DSKRSCKVKK + +E
Sbjct: 1272 QGFQDLVLEPRLKTMDFPTTAQALGSLKDSKRSCKVKKCLVLMKE 1406
Score = 63.4 bits (132), Expect(4) = 1e-097
Identities = 27/38 (71%), Positives = 30/38 (78%)
Frame = +3 / -3
Query: 333 HQIIISTVETSITLATTGLCS*TVAQLLPSDFGTCCFK 446
+QII+ST E S T+ T GLCS*TVAQLLPSDF C FK
Sbjct: 2022 NQIIVSTAERSTTMPTAGLCS*TVAQLLPSDFDICGFK 1909
Score = 62.5 bits (130), Expect(4) = 9e-069
Identities = 29/45 (64%), Positives = 31/45 (68%)
Frame = +2 / -2
Query: 947 SSSVGMKYFLTLQDLLESWRLPKA*ATVGKPRASEWCSDTNSWNP 1081
SS + K+FLTLQDLLES RLPKA*A VGK S T SWNP
Sbjct: 1408 SSFIRTKHFLTLQDLLESLRLPKA*AVVGKSMVFRRGSSTKSWNP 1274
Score = 51.0 bits (105), Expect(3) = 4e-077
Identities = 24/48 (50%), Positives = 29/48 (60%)
Frame = +1 / -1
Query: 310 ASRTVFQYIRSSYPLLKRQSP*QQQASAHERWHSCCPAISALVASKTG 453
+S+ + IRSSY K Q P QQQA AHE+ H+CC I VA K G
Sbjct: 2045 SSQDTVRRIRSSYQPQKGQPPCQQQAFAHEQ*HNCCLVILTFVALKAG 1902
Score = 49.6 bits (102), Expect(6) = 8e-086
Identities = 22/40 (55%), Positives = 28/40 (70%)
Frame = -1 / +1
Query: 452 PVFEATSAEIAGQQLCHRS*AEACCC*GD*RFNSGYDDLM 333
P F+AT+ +I QQLC+ S*A+ACC G * F YDDL+
Sbjct: 1903 PAFKATNVKITRQQLCYCS*AKACCWHGG*PFCG*YDDLI 2022
Score = 49.6 bits (102), Expect(4) = 9e-069
Identities = 25/48 (52%), Positives = 29/48 (60%)
Frame = +2 / -2
Query: 311 PPGQFSNTSDHHIHC*NVNHPSNNRPLLMNGGTAVAQRFRHLLLQRQE 454
PP + SDH I+ VNH +N+RPLLMN T VA F HL L R E
Sbjct: 2044 PPRTQLDESDHRINRRKVNHHANSRPLLMNSSTTVA**F*HLWL*RLE 1901
Score = 42.3 bits (86), Expect(5) = e-121
Identities = 16/36 (44%), Positives = 23/36 (63%)
Frame = -2 / +2
Query: 571 DNREVSKNSCKIFGISLTEKVPAMKEKGCGDINTNY 464
++++V N CKIFGISLT+KV E C N ++
Sbjct: 1790 NDKDVHTNGCKIFGISLTQKVRVCDEVECSSANCDF 1897
Score = 36.3 bits (73), Expect(6) = 8e-086
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = -1 / +1
Query: 566 QGS*QKQLQNIWHIFDREGSSNERKGL 486
QG K LQN+W++FD EGSS G+
Sbjct: 1795 QGCSHKWLQNLWYLFDSEGSSMR*SGM 1875
Score = 35.9 bits (72), Expect(6) = 8e-086
Identities = 15/30 (50%), Positives = 19/30 (63%)
Frame = -2 / +2
Query: 1177 NAAVATSQPCEATNMQYIDERSCSNDASNI 1088
N+A SQ EA N QY D+R+CS + NI
Sbjct: 1181 NSASEASQASEARNFQYSDDRNCSINMCNI 1270
Score = 32.7 bits (65), Expect(3) = 4e-060
Identities = 22/48 (45%), Positives = 26/48 (54%)
Frame = -3 / +3
Query: 453 SCL*SNKCRNRWATAVPPFMSRXXXXXXXLTFQQWI**SDVLENCPGG 310
S L*S+KC+N AT V FMS+ LTF + I *SD GG
Sbjct: 1902 SSL*SHKCQNH*ATVVLLFMSKGLLLAWWLTFLRLIR*SDSSNCVLGG 2045
Score = 29.9 bits (59), Expect(6) = 8e-086
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = -2 / +2
Query: 952 GTLVDASLSNSGFHQQDGSHVPTQASKW 869
GTL DA + S F Q DG++ KW
Sbjct: 1406 GTLSDAVIRGSSFCQPDGNYTSRATYKW 1489
Score = 28.1 bits (55), Expect(4) = 1e-097
Identities = 13/28 (46%), Positives = 15/28 (53%)
Frame = +2 / -2
Query: 1088 NVTRIVGATSFINVLHVRCFAWLRSCNS 1171
NVT + A I VL + CF LRS S
Sbjct: 1270 NVTHVDRAIPIITVLKISCFRRLRSLRS 1187
Score = 24.4 bits (47), Expect(4) = 9e-069
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = +1 / -1
Query: 1090 CYSHRWSNFVHQCTACSLLRMAEKLQQ 1170
CY+ SN H CT LL+ EK Q+
Sbjct: 1268 CYTC**SNSDHHCTENFLLQTPEKPQK 1188
>gb|CA735236.1|CA735236 wpi1s.pk003.n4 wpi1s Triticum aestivum cDNA clone wpi1s.pk003.n4 5'
end, mRNA sequence
Length = 460
Score = 217 bits (469), Expect = 3e-055
Identities = 85/124 (68%), Positives = 104/124 (83%)
Frame = -2 / -2
Query: 1549 GSRFKVRYESDDASERRCTGIIAGIGDADPMWRGSKWKCLMVRWDDDVDFRQPNRISPWE 1370
G RFK++YE++DASERR TG+I G ++D GSKWKCL+VRWDDDV+ R+ NR+SPWE
Sbjct: 393 GMRFKMKYENEDASERRSTGMITGSRESDLKSHGSKWKCLVVRWDDDVECRRLNRVSPWE 214
Query: 1369 IELTSSVSGSHMSAPNAKRLKPCLPHVNPDYLVPNGSGRPDFAESAQFHKVLQGQELLGY 1190
IEL SVSGSH+S+P++KRLKPCLP VNPD L+P+GS DFAESA+FHKVLQGQELLG
Sbjct: 213 IELAGSVSGSHLSSPHSKRLKPCLPQVNPDMLLPSGSVSSDFAESARFHKVLQGQELLGS 34
Query: 1189 RTHD 1178
+ HD
Sbjct: 33 KAHD 22
Score = 199 bits (429), Expect = 8e-050
Identities = 89/134 (66%), Positives = 98/134 (73%)
Frame = +3 / +2
Query: 1194 PSNS*PCKTLWNWADSAKSGRPLPFGTR*SGLTWGRHGFSLFAFGADM*DPETELVSSIS 1373
P+NS*PCKTLWN ADSAKS LP G+ SGLTWGRHGFS F +G D *DPET+ SSIS
Sbjct: 38 PNNS*PCKTLWNLADSAKSEETLPLGSNMSGLTWGRHGFSRFEWGEDR*DPETDPASSIS 217
Query: 1374 QGEILFG*RKSTSSSHRTIKHFHFEPRHMGSASPIPAMIPVHLLSEASSLSYLTLNLEPA 1553
QG+ L R STSSSH T KHFHFEP S S +P +IPV LLSEASS SY LNL P
Sbjct: 218 QGDTLLRRRHSTSSSHLTTKHFHFEPCDFRSDSLLPVIIPVDLLSEASSFSYFILNLIPT 397
Query: 1554 ENG*LKLLINFENG 1595
E *LKLL+NF+ G
Sbjct: 398 EKX*LKLLMNFQYG 439
Score = 154 bits (331), Expect = 3e-036
Identities = 70/146 (47%), Positives = 90/146 (61%)
Frame = +2 / +1
Query: 1160 SCNSSIVMSSITQ*FLTLQDLVELGRFRKIRTTASIWN*VVWINMGKTWFQSLCIWCRHV 1339
+ + +M TQ*FLTLQDLVE GRFRKIR S W VWIN+G+ W Q + +
Sbjct: 4 AARAGTIMGFRTQ*FLTLQDLVESGRFRKIRRNTSTWKQHVWINLGEAWLQPF*MGRGQM 183
Query: 1340 RS*N*TSQLNLPRRNPVWLTKIYIVIPSDHQTFPFRTTPHGVSITNSCYDPCASSFRSII 1519
RS N +S+ NLPRR P+ T +YI+IPS HQTFP RT V ++ Y P SF SI
Sbjct: 184 RSRNRSSKFNLPRRYPIKATALYIIIPSHHQTFPLRTMRLQV*LSAPSYHPS*PSF*SIF 363
Query: 1520 ALISHFEPRTSRKWLTEALDKLRKWY 1597
+ HF+P ++RK +TEA +L WY
Sbjct: 364 IFVFHFKPHSNRKXVTEASHELPIWY 441
Score = 139 bits (299), Expect = 7e-032
Identities = 72/137 (52%), Positives = 84/137 (61%)
Frame = -1 / -1
Query: 1595 TIFEVYQELQSTIFCWFEVQSEI*ER*CF*KKMHRDHSRNW*C*PHVAWFEMEMFDGPMG 1416
TI EV+++LQS FCW EV +EI + CF KK++ D + P VAWFE+EMF G MG
Sbjct: 439 TILEVHEKLQSXFFCWNEV*NEIRK*RCFRKKVNWDDNWEQRVRPEVAWFEVEMFGGEMG 260
Query: 1415 *RCRFSSTKQDFSLGD*AD*FSFRISHVCTKCKETETMSSPC*SRLPSSKWKRSS*FCGI 1236
* CR S SLGD* F IS V + K E M P *SR +SKWK FCGI
Sbjct: 259 **CRVPSP**GISLGD*TCWIGFGISSVLSPFKTAEAMPPPS*SRHVASKWKCFFGFCGI 80
Query: 1235 CPIPQGLARSRITGL*N 1185
C IPQGLARSRI G *+
Sbjct: 79 CQIPQGLARSRIIGF*S 29
Score = 134 bits (288), Expect = 2e-030
Identities = 71/137 (51%), Positives = 86/137 (62%)
Frame = -3 / -3
Query: 1596 YHFRSLSRASVNHFLLVRGSK*DMRAMMLLKEDAQGS*QELVMLTPCGVVRNGNV*WSDG 1417
YH S ASV FLL G K*+ + ML KE G * T +VR+GNV W DG
Sbjct: 440 YHIGSS*EASVTLFLLE*GLK*NTKMKMLQKEGQLG**LGAESQT*SRMVRSGNVWW*DG 261
Query: 1416 MTM*IFVNQTGFLLGRLS*LVQFQDLTCLHQMQRD*NHVFPMLIQTT*FQMEAVVLILRN 1237
M M* V G+LLGRL+ L +F+DL C +Q *+H P LIQT FQ+E + ILRN
Sbjct: 260 MMM*SAVALIGYLLGRLNLLDRFRDLICPLPIQNG*SHASPKLIQTCCFQVEVFLRILRN 81
Query: 1236 LPNSTRSCKVKNYWVIE 1186
LP+STRSCKVKNYWV++
Sbjct: 80 LPDSTRSCKVKNYWVLK 30
Score = 133 bits (286), Expect = 4e-030
Identities = 76/139 (54%), Positives = 79/139 (56%)
Frame = +1 / +3
Query: 1180 HEFYNPVILDLARPCGIGQIPQNQDDRFHLELGSLD*HGEDMVSVSLHLVQTCEILKLN* 1359
H NP+ILDLARPCGI QIPQN FHLE LD* G M S L+ +T EI K
Sbjct: 24 HGL*NPIILDLARPCGIWQIPQNPKKHFHLEATCLD*LGGGMASAVLNGERTDEIPKPIQ 203
Query: 1360 SAQSPKEKSCLVDENLHRHPIGPSNISISNHATWGQHHQFLL*SLCIFFQKHHRSHISL* 1539
QSPKE D LH HPI P NIS SNHAT G L S FF KH IS *
Sbjct: 204 QVQSPKEIPY*GDGTLHHHPISPPNISTSNHATSGLTLCSQLSSQLTFFLKHLHFRISF* 383
Query: 1540 TSNQQKMVD*SS**TSKMV 1596
TS QQK D*S *TS MV
Sbjct: 384 TSFQQKKXD*SFS*TSNMV 440
>gb|CV764620.1|CV764620 FGAS059005 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 852
Score = 71.2 bits (149), Expect(7) = 1e-048
Identities = 28/45 (62%), Positives = 32/45 (71%)
Frame = -2 / +1
Query: 994 QKVLQGQEVFHPYRGTLVDASLSNSGFHQQDGSHVPTQASKWHAQ 860
+KVLQGQEVF PYRG+LVDA + N GF QQDG + KW AQ
Sbjct: 298 KKVLQGQEVFRPYRGSLVDARMRNGGFQQQDGPYASGLLDKWRAQ 432
Score = 70.3 bits (147), Expect(7) = 1e-048
Identities = 27/37 (72%), Positives = 30/37 (81%)
Frame = -2 / +3
Query: 1189 RTHDNAAVATSQPCEATNMQYIDERSCSNDASNIIPG 1079
RTHD AVATSQPCEA N+QYIDER CSN+ SN + G
Sbjct: 108 RTHDGTAVATSQPCEARNLQYIDERGCSNNVSNNVLG 218
Score = 57.0 bits (118), Expect(4) = 3e-024
Identities = 26/41 (63%), Positives = 30/41 (73%)
Frame = +2 / -2
Query: 1076 NPRDNVTRIVGATSFINVLHVRCFAWLRSCNSSIVMSSITQ 1198
+P D VT IV ATSFI+VL V CF WL S NSS +MSS T+
Sbjct: 221 SP*DIVTHIVRATSFIDVLQVSCFTWL*SSNSSTIMSSRTR 99
Score = 56.1 bits (116), Expect(8) = 6e-039
Identities = 25/45 (55%), Positives = 30/45 (66%)
Frame = +1 / -1
Query: 1078 PPG*CYSHRWSNFVHQCTACSLLRMAEKLQQQHCHEFYNPVILDL 1212
P G CYSH SN VH+CTA LL MA K QQQ+ HEF + + D+
Sbjct: 219 PLGHCYSHC*SNLVHRCTASFLLHMAVK*QQQYHHEFSDAWVDDI 85
Score = 54.2 bits (112), Expect(4) = 3e-024
Identities = 30/76 (39%), Positives = 42/76 (55%)
Frame = +2 / -1
Query: 791 RWWG*GLRWNSWCLLATKSTSM*LCVPLAGLSRHMRTILLMEATITQACIDQSSSVGMKY 970
RW LR +WC + L P +R +RTILL++A I+ A I+Q+SSV +
Sbjct: 501 RW**RWLRR*NWCWWPETECMLLLSAPFIQQTRCIRTILLLKAAISHARINQTSSVRTEN 322
Query: 971 FLTLQDLLESWRLPKA 1018
FLTLQDL P++
Sbjct: 321 FLTLQDLFGISETPQS 274
Score = 52.4 bits (108), Expect(8) = 6e-039
Identities = 26/61 (42%), Positives = 35/61 (57%)
Frame = +1 / -3
Query: 811 EMEQLVLVGHEKHIHVAVRATCWPE*AHENHLADGSHYYSSLHRPEFLCRDEILLDLARP 990
E +LVLV + V RA + H++HL S ++S H+P+FL D LLDLARP
Sbjct: 481 ETVELVLVARNRMHAVVERAIYPTDQMHKDHLVVESRHFSCAHQPDFLGTDGKLLDLARP 302
Query: 991 F 993
F
Sbjct: 301 F 299
Score = 47.8 bits (98), Expect(7) = 1e-048
Identities = 18/25 (72%), Positives = 21/25 (84%)
Frame = -2 / +1
Query: 787 LMFQRGDPKMSPFEFGHFHLNKNED 713
LMFQ+ DPK+S FEFGH HL+KN D
Sbjct: 508 LMFQQADPKVSRFEFGHGHLDKNVD 582
Score = 41.4 bits (84), Expect(8) = 6e-039
Identities = 17/27 (62%), Positives = 19/27 (70%)
Frame = +2 / -1
Query: 719 VLIQVEMPKFKWGHLWITSLKHQDRWW 799
VLIQV MPK + LWI+ LKHQ R W
Sbjct: 576 VLIQVPMPKLESRDLWISLLKHQHRRW 496
Score = 35.0 bits (70), Expect(8) = 6e-039
Identities = 15/22 (68%), Positives = 17/22 (77%)
Frame = +3 / -3
Query: 1041 GLPSGVLTPILGTPGIMLLASL 1106
G+PSGVLTP LGTP LL +L
Sbjct: 259 GIPSGVLTPWLGTPPRTLLLTL 194
Score = 34.5 bits (69), Expect(4) = 3e-024
Identities = 15/24 (62%), Positives = 17/24 (70%)
Frame = +3 / -2
Query: 714 SSFLFKWKCPNSNGDIFGSPR*NI 785
S+FL K CPNSN + FGS *NI
Sbjct: 581 STFLSKCPCPNSNRETFGSAC*NI 510
Score = 33.1 bits (66), Expect(7) = 1e-048
Identities = 13/14 (92%), Positives = 13/14 (92%)
Frame = -2 / +1
Query: 550 NSCKIFGISLTEKV 509
NSCKIFGISL EKV
Sbjct: 715 NSCKIFGISLAEKV 756
Score = 32.7 bits (65), Expect(8) = 6e-039
Identities = 12/17 (70%), Positives = 12/17 (70%)
Frame = +3 / -1
Query: 411 LLPSDFGTCCFKDRKGD 461
LLP D GTCCFK GD
Sbjct: 852 LLPRDSGTCCFKGAFGD 802
Score = 31.8 bits (63), Expect(8) = 6e-039
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = +3 / -3
Query: 984 KTFWNLGDSPKPEQ 1025
+ FWNL DSPKPEQ
Sbjct: 307 RPFWNL*DSPKPEQ 266
Score = 29.0 bits (57), Expect(7) = 1e-048
Identities = 12/16 (75%), Positives = 13/16 (81%)
Frame = -2 / +2
Query: 460 SPFLSLKQQVPKSLGN 413
SP LKQQVP+SLGN
Sbjct: 803 SPNAPLKQQVPESLGN 850
Score = 28.1 bits (55), Expect(7) = 1e-048
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = -2 / +1
Query: 718 EDRRAMFVHAGGIGGTEQTTMLQAH 644
+D A FV A GIG EQT L+ H
Sbjct: 580 DDPYARFVSAEGIGRGEQTLSLRPH 654
Score = 25.8 bits (50), Expect(8) = 6e-039
Identities = 12/19 (63%), Positives = 13/19 (68%)
Frame = +3 / -2
Query: 663 VCSVPPMPPAWTNIARLSS 719
VCS PMP A TN+A SS
Sbjct: 635 VCSPLPMPSAETNLAYGSS 579
Score = 24.0 bits (46), Expect(7) = 1e-048
Identities = 7/11 (63%), Positives = 8/11 (72%)
Frame = -1 / +2
Query: 1082 GGSKNWCQNTT 1050
G K WC+NTT
Sbjct: 218 GSPKPWCENTT 250
Score = 23.1 bits (44), Expect(4) = 3e-024
Identities = 6/11 (54%), Positives = 9/11 (81%)
Frame = +2 / -2
Query: 1046 SEWCSDTNSWN 1078
S+WCS T +W+
Sbjct: 254 SKWCSHTMAWD 222
Score = 21.7 bits (41), Expect(8) = 6e-039
Identities = 7/10 (70%), Positives = 9/10 (90%)
Frame = +3 / -2
Query: 510 TFSVKDMPNI 539
TFS ++MPNI
Sbjct: 755 TFSAREMPNI 726
>gb|AY376130.1| Triticum aestivum ETTIN-like auxin response factor (ETT-L alpha)
mRNA, partial cds
Length = 2015
Score = 95.0 bits (201), Expect(3) = 7e-031
Identities = 59/131 (45%), Positives = 73/131 (55%)
Frame = +3 / -1
Query: 1365 SISQGEILFG*RKSTSSSHRTIKHFHFEPRHMGSASPIPAMIPVHLLSEASSLSYLTLNL 1544
SIS G+ LF +S SSH T + FHFEP H+ ++ + +I LS SSL Y LNL
Sbjct: 716 SISHGDSLFWLLQSVPSSHLTSRLFHFEPVHLMGSTSLIPVIIPDRLSLTSSLPY*ILNL 537
Query: 1545 EPAENG*LKLLINFENGIMNSDWLNLGL**MWNTLLVATACATLGSEPRFEHWL*RAGKA 1724
P +NG +L NF+ GI+NSD LGL* M TLL AT S FE L +A +
Sbjct: 536 IPIQNGRFRLFRNFQYGIINSDAAALGL*QM*KTLLCFKELATADSVCIFELLLLKAFRR 357
Query: 1725 DPFLS*AARRT 1757
FLS* A T
Sbjct: 356 ASFLS*MALLT 324
Score = 77.6 bits (163), Expect(6) = 7e-045
Identities = 34/59 (57%), Positives = 43/59 (72%)
Frame = -2 / +1
Query: 1795 LFLRGDNGELRLGVRRAAQLKNGSAFPALYNQCSNLGSLPNVAHAVATKSVFHIYYNPR 1619
LFLRGD+GELRLGVRRA QLKN + A + S + +L VA+++ +SVFHI YNPR
Sbjct: 286 LFLRGDDGELRLGVRRAIQLKNEALLKAFNSNSSKIHTLSAVANSLKHRSVFHICYNPR 462
Score = 61.1 bits (127), Expect(6) = 7e-045
Identities = 20/32 (62%), Positives = 24/32 (75%)
Frame = -2 / +1
Query: 1456 WRGSKWKCLMVRWDDDVDFRQPNRISPWEIEL 1361
W GSKWK L+VRW+D D NR+SPWEIE+
Sbjct: 625 WTGSKWKSLLVRWEDGTDCNSQNRLSPWEIEI 720
Score = 55.1 bits (114), Expect(3) = 7e-031
Identities = 21/32 (65%), Positives = 25/32 (78%)
Frame = +1 / -2
Query: 1183 EFYNPVILDLARPCGIGQIPQNQDDRFHLELG 1278
EF NP ILDLARP G+ Q+P++ DD FH ELG
Sbjct: 901 EFQNPSILDLARPWGVYQLPRSPDDHFHTELG 806
Score = 42.3 bits (86), Expect(6) = 7e-045
Identities = 19/31 (61%), Positives = 22/31 (70%)
Frame = -2 / +1
Query: 1060 RTPLGSPRFSYRCSGFGESPRFQKVLQGQEV 968
R P SP F+Y+ GFGES F +VLQGQEV
Sbjct: 1012 RFPPQSPYFAYQPVGFGESVGFPEVLQGQEV 1104
Score = 42.3 bits (86), Expect(6) = 7e-045
Identities = 21/58 (36%), Positives = 31/58 (53%)
Frame = -2 / +1
Query: 1354 SVSGSHMSAPNAKRLKPCLPHVNPDYLVPNGSGRPDFAESAQFHKVLQGQELLGYRTH 1181
SVS + + ++ + P N D G+GRPD + + +VLQGQEL+G TH
Sbjct: 730 SVSIAQSLSASSSKRTKLCPQGNVDVPTLYGNGRPDSVGADKLPRVLQGQELMGSGTH 903
Score = 37.7 bits (76), Expect(6) = 7e-045
Identities = 15/32 (46%), Positives = 21/32 (65%)
Frame = -2 / +1
Query: 589 AVAAASDNREVSKNSCKIFGISLTEKVPAMKE 494
A SD R+V++ SC +FG SLTEK+ +E
Sbjct: 1393 AAKLGSDGRKVARTSCMLFGFSLTEKMLPTEE 1488
Score = 33.1 bits (66), Expect(3) = 7e-031
Identities = 19/33 (57%), Positives = 19/33 (57%)
Frame = +3 / -1
Query: 963 *NTS*PCKTFWNLGDSPKPEQR*ENLGLPSGVL 1061
* TS*PCKT N DSPKP * GL G L
Sbjct: 1109 *ETS*PCKTSGNPTDSPKPTGW*AK*GL*GGNL 1011
Score = 29.5 bits (58), Expect(6) = 7e-045
Identities = 10/17 (58%), Positives = 14/17 (82%)
Frame = -2 / +1
Query: 1549 GSRFKVRYESDDASERR 1499
G RFK++Y S+D +ERR
Sbjct: 532 GMRFKIQYGSEDVNERR 582
>gb|BQ241700.1|BQ241700 TaE05001H09R TaE05 Triticum aestivum cDNA clone TaE05001H09R, mRNA
sequence
Length = 737
Score = 94.1 bits (199), Expect(2) = 2e-031
Identities = 38/98 (38%), Positives = 58/98 (59%)
Frame = -2 / +1
Query: 1549 GSRFKVRYESDDASERRCTGIIAGIGDADPMWRGSKWKCLMVRWDDDVDFRQPNRISPWE 1370
G RF++R+E ++A E+R TG I G + D +W S W+ L VRWD+ +P+R+SPW+
Sbjct: 298 GMRFRMRFEGEEAPEQRFTGTIVGSENLDQLWPESNWRSLKVRWDEPSTIPRPDRVSPWK 477
Query: 1369 IELTSSVSGSHMSAPNAKRLKPCLPHVNPDYLVPNGSG 1256
IE SS + + KR +P +P V+P+ V G
Sbjct: 478 IEPASSPPVNPLPLSRVKRPRPNVPPVSPESSVLTKEG 591
Score = 64.3 bits (134), Expect(2) = 2e-031
Identities = 27/61 (44%), Positives = 39/61 (63%)
Frame = -2 / +1
Query: 1795 LFLRGDNGELRLGVRRAAQLKNGSAFPALYNQCSNLGSLPNVAHAVATKSVFHIYYNPRL 1616
+FLRG++GELR+GVRRA + + + + +LG L HA+ TKS+F +YY PR
Sbjct: 52 IFLRGESGELRVGVRRAMRQLSNVPSSVISSHSMHLGVLATAWHAINTKSMFTVYYKPRT 231
Query: 1615 S 1613
S
Sbjct: 232 S 234
>gb|CA498059.1|CA498059 WHE3237_G05_M09ZT Wheat meiotic anther cDNA library Triticum aestivum
cDNA clone WHE3237_G05_M09, mRNA sequence
Length = 534
Score = 100 bits (212), Expect(3) = 2e-031
Identities = 39/57 (68%), Positives = 42/57 (73%)
Frame = -2 / +1
Query: 1030 YRCSGFGESPRFQKVLQGQEVFHPYRGTLVDASLSNSGFHQQDGSHVPTQASKWHAQ 860
Y CSGFGES RFQKVLQGQEVF PYRG+LVDA + N GF QQDG + KW AQ
Sbjct: 40 YHCSGFGESQRFQKVLQGQEVFRPYRGSLVDARMRNGGFQQQDGPYASALLDKWRAQ 210
Score = 81.7 bits (172), Expect(4) = 1e-025
Identities = 42/84 (50%), Positives = 52/84 (61%)
Frame = +2 / -1
Query: 791 RWWG*GLRWNSWCLLATKSTSM*LCVPLAGLSRHMRTILLMEATITQACIDQSSSVGMKY 970
RW LR +WC + L P SR +RTILL++A I+ ACI+Q+SSV +
Sbjct: 279 RW**RWLRR*NWCWWPETERMLLLSAPFIQQSRCIRTILLLKAAISHACINQTSSVRTEN 100
Query: 971 FLTLQDLLESWRLPKA*ATVGKPR 1042
FLTLQDLLES RLPKA A VG +
Sbjct: 99 FLTLQDLLESLRLPKARAMVGNSK 28
Score = 47.8 bits (98), Expect(3) = 2e-031
Identities = 18/25 (72%), Positives = 21/25 (84%)
Frame = -2 / +1
Query: 787 LMFQRGDPKMSPFEFGHFHLNKNED 713
LMFQ+ DPK+S FEFGH HL+KN D
Sbjct: 286 LMFQQADPKVSRFEFGHGHLDKNVD 360
Score = 41.8 bits (85), Expect(4) = 1e-025
Identities = 18/29 (62%), Positives = 20/29 (68%)
Frame = +2 / -1
Query: 713 ILVLIQVEMPKFKWGHLWITSLKHQDRWW 799
I VLIQV MPK + LWI+ LKHQ R W
Sbjct: 360 IHVLIQVPMPKLESRDLWISLLKHQHRRW 274
Score = 33.1 bits (66), Expect(3) = 2e-031
Identities = 13/14 (92%), Positives = 13/14 (92%)
Frame = -2 / +1
Query: 550 NSCKIFGISLTEKV 509
NSCKIFGISL EKV
Sbjct: 493 NSCKIFGISLAEKV 534
Score = 25.4 bits (49), Expect(4) = 1e-025
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = +3 / -2
Query: 663 VCSVPPMPPAWTNIARLSS 719
+CS PMP A TN+A SS
Sbjct: 413 ICSPLPMPSAETNLAYGSS 357
Score = 24.4 bits (47), Expect(4) = 1e-025
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = +2 / -1
Query: 509 NLLGQRYAKYFATV 550
NL QR AKY ATV
Sbjct: 534 NLFSQRNAKYLATV 493
>gb|BG907022.1|BG907022 TaLr1156E09R TaLr1 Triticum aestivum cDNA clone TaLr1156E09 5', mRNA
sequence
Length = 649
Score = 93.6 bits (198), Expect(2) = 2e-031
Identities = 36/90 (40%), Positives = 56/90 (62%)
Frame = -2 / +1
Query: 1549 GSRFKVRYESDDASERRCTGIIAGIGDADPMWRGSKWKCLMVRWDDDVDFRQPNRISPWE 1370
G RF++R+E ++A E+R TG I G + D +W S W+ L VRWD+ +P+R+SPW+
Sbjct: 331 GMRFRMRFEGEEAPEQRFTGTIVGSENLDQLWPESNWRSLKVRWDEPSTIPRPDRVSPWK 510
Query: 1369 IELTSSVSGSHMSAPNAKRLKPCLPHVNPD 1280
IE SS + + KR +P +P V+P+
Sbjct: 511 IEPASSPPVNPLPLSRVKRPRPNVPPVSPE 600
Score = 64.3 bits (134), Expect(2) = 2e-031
Identities = 27/61 (44%), Positives = 39/61 (63%)
Frame = -2 / +1
Query: 1795 LFLRGDNGELRLGVRRAAQLKNGSAFPALYNQCSNLGSLPNVAHAVATKSVFHIYYNPRL 1616
+FLRG++GELR+GVRRA + + + + +LG L HA+ TKS+F +YY PR
Sbjct: 85 IFLRGESGELRVGVRRAMRQLSNVPSSVISSHSMHLGVLATAWHAINTKSMFTVYYKPRT 264
Query: 1615 S 1613
S
Sbjct: 265 S 267
>gb|BG907523.1|BG907523 TaLr1160F10R TaLr1 Triticum aestivum cDNA clone TaLr1160F10 5', mRNA
sequence
Length = 630
Score = 93.6 bits (198), Expect(2) = 2e-031
Identities = 36/90 (40%), Positives = 56/90 (62%)
Frame = -2 / +1
Query: 1549 GSRFKVRYESDDASERRCTGIIAGIGDADPMWRGSKWKCLMVRWDDDVDFRQPNRISPWE 1370
G RF++R+E ++A E+R TG I G + D +W S W+ L VRWD+ +P+R+SPW+
Sbjct: 331 GMRFRMRFEGEEAPEQRFTGTIVGSENLDQLWPESNWRSLKVRWDEPSTIPRPDRVSPWK 510
Query: 1369 IELTSSVSGSHMSAPNAKRLKPCLPHVNPD 1280
IE SS + + KR +P +P V+P+
Sbjct: 511 IEPASSPPVNPLPLSRVKRPRPNVPPVSPE 600
Score = 64.3 bits (134), Expect(2) = 2e-031
Identities = 27/61 (44%), Positives = 39/61 (63%)
Frame = -2 / +1
Query: 1795 LFLRGDNGELRLGVRRAAQLKNGSAFPALYNQCSNLGSLPNVAHAVATKSVFHIYYNPRL 1616
+FLRG++GELR+GVRRA + + + + +LG L HA+ TKS+F +YY PR
Sbjct: 85 IFLRGESGELRVGVRRAMRQLSNVPSSVISSHSMHLGVLATAWHAINTKSMFTVYYKPRT 264
Query: 1615 S 1613
S
Sbjct: 265 S 267
>gb|CA733774.1|CA733774 wlp1c.pk006.j21 wlp1c Triticum aestivum cDNA clone wlp1c.pk006.j21 5'
end, mRNA sequence
Length = 612
Score = 92.7 bits (196), Expect(2) = 5e-031
Identities = 36/90 (40%), Positives = 55/90 (61%)
Frame = -2 / +3
Query: 1549 GSRFKVRYESDDASERRCTGIIAGIGDADPMWRGSKWKCLMVRWDDDVDFRQPNRISPWE 1370
G RFK+R+E ++A E+R TG I G + D +W S W+ L RWD+ +P+R+SPW+
Sbjct: 300 GMRFKMRFEGEEAPEQRFTGTIVGSENLDQLWPESNWRSLXXRWDEPSTIPRPDRVSPWK 479
Query: 1369 IELTSSVSGSHMSAPNAKRLKPCLPHVNPD 1280
IE SS + + KR +P +P V+P+
Sbjct: 480 IEPASSPPVNPLPLSRVKRPRPNVPPVSPE 569
Score = 64.3 bits (134), Expect(2) = 5e-031
Identities = 27/61 (44%), Positives = 39/61 (63%)
Frame = -2 / +3
Query: 1795 LFLRGDNGELRLGVRRAAQLKNGSAFPALYNQCSNLGSLPNVAHAVATKSVFHIYYNPRL 1616
+FLRG++GELR+GVRRA + + + + +LG L HA+ TKS+F +YY PR
Sbjct: 54 IFLRGESGELRVGVRRAMRQLSNVPSSVISSHSMHLGVLATAWHAINTKSMFTVYYKPRT 233
Query: 1615 S 1613
S
Sbjct: 234 S 236
>gb|CV770790.1|CV770790 FGAS065183 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 882
Score = 52.8 bits (109), Expect(5) = 8e-029
Identities = 22/30 (73%), Positives = 22/30 (73%)
Frame = -2 / +1
Query: 487 CGDINTNYPSPFLSLKQQVPKSLGNSCATV 398
C D NYPS LKQQVPKSLGNSCATV
Sbjct: 529 CDDGGANYPSSTQPLKQQVPKSLGNSCATV 618
Score = 46.4 bits (95), Expect(5) = 8e-023
Identities = 19/37 (51%), Positives = 22/37 (59%)
Frame = +1 / -3
Query: 394 HERWHSCCPAISALVASKTGRGMDSWC*CHHSPFLSL 504
H +WH+CC ISAL AS MDSW HH+ SL
Sbjct: 622 HLQWHNCCRGISALAASGAELKMDSWHHHHHNXISSL 512
Score = 44.1 bits (90), Expect(5) = 8e-023
Identities = 26/73 (35%), Positives = 32/73 (43%)
Frame = +2 / -2
Query: 581 GNSGMRFLNGHISVSRSSRNMMSLEHRRLLSSSDASSMDKHCASILVLIQVEMPKFKWGH 760
G LN + S+ M R L S+ S I VLIQV +PK +
Sbjct: 464 GRCNTLVLNCNTSIDHF*TKMRPERQRLLSPSNGFSGDKPSIRIIHVLIQVPLPKLESRD 285
Query: 761 LWITSLKHQDRWW 799
LWI+ LKHQ R W
Sbjct: 284 LWISLLKHQHRRW 246
Score = 44.1 bits (90), Expect(5) = 8e-029
Identities = 17/25 (68%), Positives = 20/25 (80%)
Frame = -2 / +3
Query: 787 LMFQRGDPKMSPFEFGHFHLNKNED 713
LMFQ+ DPK+S FEFG HL+KN D
Sbjct: 258 LMFQQADPKVSRFEFGQGHLDKNMD 332
Score = 41.4 bits (84), Expect(5) = 8e-029
Identities = 22/49 (44%), Positives = 28/49 (57%)
Frame = -3 / +1
Query: 936 QA*VIVASISKMVLMCLLRPASGTHSYMDVLFVANKHQLFHLNPHPHHL 790
+A* + A ISKMVLM LL +G H+ L ++HQ LN HHL
Sbjct: 106 RA*EVAAFISKMVLMHLLYWINGAHNNSMHLVSGHQHQFCRLNHRYHHL 252
Score = 37.3 bits (75), Expect(5) = 8e-029
Identities = 15/23 (65%), Positives = 15/23 (65%)
Frame = -2 / +1
Query: 421 LGNSCATVHEQRPVVARVIDVST 353
L C VHEQRPVV R IDV T
Sbjct: 670 LTECCVQVHEQRPVVGRAIDVQT 738
Score = 35.4 bits (71), Expect(5) = 8e-029
Identities = 15/19 (78%), Positives = 15/19 (78%)
Frame = -2 / +3
Query: 550 NSCKIFGISLTEKVPAMKE 494
NSCKIFGISL EKV A E
Sbjct: 465 NSCKIFGISLAEKVRARDE 521
Score = 35.0 bits (70), Expect(5) = 8e-023
Identities = 19/48 (39%), Positives = 24/48 (50%)
Frame = +2 / -2
Query: 791 RWWG*GLRWNSWCLLATKSTSM*LCVPLAGLSRHMRTILLMEATITQA 934
RW LR +WC + LC P SR +RTILLM+A + A
Sbjct: 251 RW**RWLRRQNWC**PETKCMLLLCAPFIQ*SRCIRTILLMKAATSHA 108
Score = 30.4 bits (60), Expect(5) = 8e-023
Identities = 14/19 (73%), Positives = 14/19 (73%)
Frame = +3 / -2
Query: 354 VETSITLATTGLCS*TVAQ 410
V TSI L TTGLCS*T Q
Sbjct: 737 VWTSIALPTTGLCS*TCTQ 681
Score = 24.4 bits (47), Expect(5) = 8e-023
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = +3 / -3
Query: 495 SFIAGTFSVKDMPNI 539
S +A TFS ++MPNI
Sbjct: 520 SSLARTFSAREMPNI 476
>gb|CA500766.1|CA500766 WHE4024_D06_H12ZT Wheat meiotic anther cDNA library Triticum aestivum
cDNA clone WHE4024_D06_H12, mRNA sequence
Length = 655
Score = 119 bits (255), Expect(2) = 1e-027
Identities = 48/130 (36%), Positives = 72/130 (55%)
Frame = -2 / +3
Query: 1795 LFLRGDNGELRLGVRRAAQLKNGSAFPALYNQCSNLGSLPNVAHAVATKSVFHIYYNPRL 1616
++LR + GE R+GVRR Q ++ + +Q +LG L + +HA+ T S+F +YY PRL
Sbjct: 60 VYLRSETGEQRVGVRRLVQKQSTMPASVISSQSMHLGVLASASHALKTNSIFVVYYRPRL 239
Query: 1615 SQXXXXXXXXXXXXXXXXXXSAGSRFKVRYESDDASERRCTGIIAGIGDADPMWRGSKWK 1436
SQ + G RF++ +E++D ++ G I G GD P W GS+WK
Sbjct: 240 SQSQYIVSVNKYLQASKTGFTVGMRFRMNFEAEDVPVKKFFGTIVGDGDLSPQWSGSEWK 419
Query: 1435 CLMVRWDDDV 1406
L V+WDD V
Sbjct: 420 SLKVQWDDSV 449
Score = 25.8 bits (50), Expect(2) = 1e-027
Identities = 8/16 (50%), Positives = 12/16 (75%)
Frame = -2 / +3
Query: 1393 PNRISPWEIELTSSVS 1346
P R+SPWEI+ + + S
Sbjct: 465 PERVSPWEIDSSDASS 512
>gb|BJ304916.1|BJ304916 BJ304916 Y. Ogihara unpublished cDNA library, Wh_yd Triticum aestivum
cDNA clone whyd8p17 5', mRNA sequence
Length = 662
Score = 82.2 bits (173), Expect(2) = 2e-027
Identities = 30/66 (45%), Positives = 44/66 (66%)
Frame = -2 / +2
Query: 1549 GSRFKVRYESDDASERRCTGIIAGIGDADPMWRGSKWKCLMVRWDDDVDFRQPNRISPWE 1370
G RF++R+E ++A E+R TG I G + D +W S W+ L VRWD+ +P+R+SPW+
Sbjct: 455 GMRFRMRFEGEEAPEQRFTGTIVGSENLDQLWPESNWRSLKVRWDEPSTIPRPDRVSPWK 634
Query: 1369 IELTSS 1352
IE SS
Sbjct: 635 IEPASS 652
Score = 62.9 bits (131), Expect(2) = 2e-027
Identities = 27/61 (44%), Positives = 38/61 (62%)
Frame = -2 / +2
Query: 1795 LFLRGDNGELRLGVRRAAQLKNGSAFPALYNQCSNLGSLPNVAHAVATKSVFHIYYNPRL 1616
+FLRG++GELR+GVRRA + + + +LG L HA+ TKS+F +YY PR
Sbjct: 209 IFLRGESGELRVGVRRAMRQLPNVPSSVISSHSMHLGVLATAWHAINTKSMFTVYYKPRT 388
Query: 1615 S 1613
S
Sbjct: 389 S 391
>gb|CB307104.1|CB307104 HFIG089 Hessian fly infested cDNA library Triticum aestivum cDNA,
mRNA sequence
Length = 698
Score = 66.6 bits (139), Expect(3) = 3e-021
Identities = 37/82 (45%), Positives = 47/82 (57%)
Frame = +3 / -2
Query: 1365 SISQGEILFG*RKSTSSSHRTIKHFHFEPRHMGSASPIPAMIPVHLLSEASSLSYLTLNL 1544
SIS GE L + SSH T +H HF+P H+ ++ + I LS ASSLS +LNL
Sbjct: 259 SISHGETLRWWLQWLPSSHLTCRHLHFDPGHLMGSTSLIPEINPVDLSFASSLSLESLNL 80
Query: 1545 EPAENG*LKLLINFENGIMNSD 1610
P EN KLL N + G +NSD
Sbjct: 79 IPMENEWFKLLENLQYGTINSD 14
Score = 57.0 bits (118), Expect(5) = 2e-027
Identities = 19/31 (61%), Positives = 21/31 (67%)
Frame = -2 / +3
Query: 1456 WRGSKWKCLMVRWDDDVDFRQPNRISPWEIE 1364
W GSKW+CL VRWDD R+SPWEIE
Sbjct: 168 WPGSKWRCLQVRWDDGNHCNHQRRVSPWEIE 260
Score = 54.7 bits (113), Expect(5) = 2e-027
Identities = 24/47 (51%), Positives = 31/47 (65%)
Frame = -2 / +3
Query: 1336 MSAPNAKRLKPCLPHVNPDYLVPNGSGRPDFAESAQFHKVLQGQELL 1196
+SA ++KR K P N D V +G+G PD E+ FH+VLQGQELL
Sbjct: 294 LSASSSKRAKLYFPQGNLDAPVTDGNGYPDSVETGSFHRVLQGQELL 434
Score = 44.1 bits (90), Expect(3) = 3e-021
Identities = 21/46 (45%), Positives = 26/46 (56%)
Frame = +3 / -2
Query: 1197 SNS*PCKTLWNWADSAKSGRPLPFGTR*SGLTWGRHGFSLFAFGAD 1334
+NS*PCKTLW S +SG P P T S L G++ + F AD
Sbjct: 433 NNS*PCKTLWKLPVSTESG*PFPSVTGASKLP*GKYNLARFELDAD 296
Score = 40.0 bits (81), Expect(5) = 2e-027
Identities = 17/28 (60%), Positives = 19/28 (67%)
Frame = -2 / +3
Query: 1036 FSYRCSGFGESPRFQKVLQGQEVFHPYR 953
F Y SGFGES RF +VLQGQE+ R
Sbjct: 561 FPYHSSGFGESLRFPEVLQGQEMSQALR 644
Score = 36.8 bits (74), Expect(3) = 3e-021
Identities = 17/25 (68%), Positives = 19/25 (76%)
Frame = +3 / -2
Query: 963 *NTS*PCKTFWNLGDSPKPEQR*EN 1037
*+ S*PCKT NL DSPKPE+ * N
Sbjct: 634 *DIS*PCKTSGNLRDSPKPEEW*GN 560
Score = 27.2 bits (53), Expect(5) = 2e-027
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = -2 / +3
Query: 1516 DASERRCTGIIAGIGDADPM 1457
D + R TG+I+GI + DP+
Sbjct: 105 DDANERSTGLISGISEVDPI 164
Score = 26.3 bits (51), Expect(5) = 2e-027
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = -2 / +3
Query: 1549 GSRFKVRYESDDASER 1502
G RFK ESDDA+ER
Sbjct: 75 GMRFKDSNESDDANER 122
>gb|CV782429.1|CV782429 FGAS076842 Triticum aestivum FGAS: Library 2 Gate 3 Triticum aestivum
cDNA, mRNA sequence
Length = 879
Score = 119 bits (255), Expect = 8e-026
Identities = 48/130 (36%), Positives = 72/130 (55%)
Frame = -2 / +1
Query: 1795 LFLRGDNGELRLGVRRAAQLKNGSAFPALYNQCSNLGSLPNVAHAVATKSVFHIYYNPRL 1616
++LR + GE R+GVRR Q ++ + +Q +LG L + +HA+ T S+F +YY PRL
Sbjct: 169 VYLRSETGEQRVGVRRLVQKQSTMPASVISSQSMHLGVLASASHALKTNSIFVVYYRPRL 348
Query: 1615 SQXXXXXXXXXXXXXXXXXXSAGSRFKVRYESDDASERRCTGIIAGIGDADPMWRGSKWK 1436
SQ + G RF++ +E++D ++ G I G GD P W GS+WK
Sbjct: 349 SQSQYIVSVNKYLQASKTGFTVGMRFRMNFEAEDVPVKKFFGTIVGDGDLSPQWSGSEWK 528
Query: 1435 CLMVRWDDDV 1406
L V+WDD V
Sbjct: 529 SLKVQWDDSV 558
>gb|CA502175.1|CA502175 WHE4043_G07_N13ZT Wheat meiotic anther cDNA library Triticum aestivum
cDNA clone WHE4043_G07_N13, mRNA sequence
Length = 777
Score = 71.2 bits (149), Expect(3) = 8e-021
Identities = 40/89 (44%), Positives = 51/89 (57%)
Frame = +3 / -1
Query: 1359 VSSISQGEILFG*RKSTSSSHRTIKHFHFEPRHMGSASPIPAMIPVHLLSEASSLSYLTL 1538
+ SIS GE L + SSH T +H HF+P H+ ++ + I LS ASSLS +L
Sbjct: 303 ILSISHGETLRWWLQWLPSSHLTCRHLHFDPGHLMGSTSLIPEINPVDLSFASSLSLESL 124
Query: 1539 NLEPAENG*LKLLINFENGIMNSDWLNLG 1625
NL P ENG KLL N + G +NSD LG
Sbjct: 123 NLIPMENGWFKLLENLQYGTINSDAPLLG 37
Score = 57.0 bits (118), Expect(5) = 4e-025
Identities = 19/31 (61%), Positives = 21/31 (67%)
Frame = -2 / +2
Query: 1456 WRGSKWKCLMVRWDDDVDFRQPNRISPWEIE 1364
W GSKW+CL VRWDD R+SPWEIE
Sbjct: 206 WPGSKWRCLQVRWDDGNHCNHQRRVSPWEIE 298
Score = 50.1 bits (103), Expect(5) = 4e-025
Identities = 23/47 (48%), Positives = 30/47 (63%)
Frame = -2 / +2
Query: 1336 MSAPNAKRLKPCLPHVNPDYLVPNGSGRPDFAESAQFHKVLQGQELL 1196
+SA ++KR K P N D V +G+ PD E+ FH+VLQGQELL
Sbjct: 332 LSASSSKRAKLYFPQGNLDAPVTDGNDFPDPVETGSFHRVLQGQELL 472
Score = 41.8 bits (85), Expect(3) = 8e-021
Identities = 20/46 (43%), Positives = 25/46 (54%)
Frame = +3 / -1
Query: 1197 SNS*PCKTLWNWADSAKSGRPLPFGTR*SGLTWGRHGFSLFAFGAD 1334
+NS*PCKTLW S SG+ P T S L G++ + F AD
Sbjct: 471 NNS*PCKTLWKLPVSTGSGKSFPSVTGASKLP*GKYNLARFELDAD 334
Score = 38.2 bits (77), Expect(5) = 4e-025
Identities = 15/26 (57%), Positives = 21/26 (80%)
Frame = -1 / +1
Query: 1037 VFLPLLRLWGVSKIPKGLARSRSISS 960
V LP LRL + ++P+GLARSR++SS
Sbjct: 598 VSLPFLRLRRIPRVPRGLARSRNVSS 675
Score = 33.1 bits (66), Expect(3) = 8e-021
Identities = 15/22 (68%), Positives = 16/22 (72%)
Frame = +3 / -1
Query: 972 S*PCKTFWNLGDSPKPEQR*EN 1037
S*PCKT N DSPKPE+ * N
Sbjct: 663 S*PCKTSGNPRDSPKPEEW*GN 598
Score = 27.2 bits (53), Expect(5) = 4e-025
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = -2 / +2
Query: 1516 DASERRCTGIIAGIGDADPM 1457
D + R TG+I+GI + DP+
Sbjct: 143 DDANERSTGLISGISEVDPI 202
Score = 24.9 bits (48), Expect(5) = 4e-025
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = -2 / +2
Query: 1549 GSRFKVRYESDDASER 1502
G RFK +SDDA+ER
Sbjct: 113 GMRFKDSNDSDDANER 160
>gb|CV767919.1|CV767919 FGAS062310 Triticum aestivum FGAS: Library 2 Gate 3 Triticum aestivum
cDNA, mRNA sequence
Length = 833
Score = 93.6 bits (198), Expect(2) = 1e-024
Identities = 36/90 (40%), Positives = 56/90 (62%)
Frame = -2 / +2
Query: 1549 GSRFKVRYESDDASERRCTGIIAGIGDADPMWRGSKWKCLMVRWDDDVDFRQPNRISPWE 1370
G RF++R+E ++A E+R TG I G + D +W S W+ L VRWD+ +P+R+SPW+
Sbjct: 233 GMRFRMRFEGEEAPEQRFTGTIVGSENLDQLWPESNWRSLKVRWDEPSTIPRPDRVSPWK 412
Query: 1369 IELTSSVSGSHMSAPNAKRLKPCLPHVNPD 1280
IE SS + + KR +P +P V+P+
Sbjct: 413 IEPASSPPVNPLPLSRVKRPRPNVPPVSPE 502
Score = 41.8 bits (85), Expect(2) = 1e-024
Identities = 21/60 (35%), Positives = 31/60 (51%)
Frame = -1 / +1
Query: 1703 PVLKSWFTT*CCTCCGHQKCVPHLLQPQIKPI*IHYTIFEVYQELQSTIFCWFEVQSEI* 1524
P + S + C C H+K V LLQ +P +HYTI +Y + +F E+Q E+*
Sbjct: 79 PGISSTHASDCMACHQHEKHVHCLLQT*NEPFRVHYTI*SIYGVCKKQLFNRDEIQDEV* 258
>gb|CA501261.1|CA501261 WHE4031_D07_H13ZT Wheat meiotic anther cDNA library Triticum aestivum
cDNA clone WHE4031_D07_H13, mRNA sequence
Length = 669
Score = 93.6 bits (198), Expect(2) = 2e-024
Identities = 36/90 (40%), Positives = 56/90 (62%)
Frame = -2 / +2
Query: 1549 GSRFKVRYESDDASERRCTGIIAGIGDADPMWRGSKWKCLMVRWDDDVDFRQPNRISPWE 1370
G RF++R+E ++A E+R TG I G + D +W S W+ L VRWD+ +P+R+SPW+
Sbjct: 155 GMRFRMRFEGEEAPEQRFTGTIVGSENLDQLWPESNWRSLKVRWDEPSTIPRPDRVSPWK 334
Query: 1369 IELTSSVSGSHMSAPNAKRLKPCLPHVNPD 1280
IE SS + + KR +P +P V+P+
Sbjct: 335 IEPASSPPVNPLPLSRVKRPRPNVPPVSPE 424
Score = 41.4 bits (84), Expect(2) = 2e-024
Identities = 20/55 (36%), Positives = 28/55 (50%)
Frame = -1 / +1
Query: 1688 WFTT*CCTCCGHQKCVPHLLQPQIKPI*IHYTIFEVYQELQSTIFCWFEVQSEI* 1524
W C C H+K V LLQ +P +HYTI +Y + +F E+Q E+*
Sbjct: 16 WSPCNCMACHQHEKHVHCLLQT*NEPFRVHYTI*SIYGVCKKQLFNRDEIQDEV* 180
>gb|BF292952.1|BF292952 WHE2166_G07_N14ZS Triticum turgidum L. var. durum (durum wheat) whole
plant cDNA library Triticum turgidum cDNA clone
WHE2166_G07_N14, mRNA sequence
Length = 582
Score = 94.1 bits (199), Expect(2) = 4e-023
Identities = 38/98 (38%), Positives = 58/98 (59%)
Frame = -2 / +1
Query: 1549 GSRFKVRYESDDASERRCTGIIAGIGDADPMWRGSKWKCLMVRWDDDVDFRQPNRISPWE 1370
G RF++R+E ++A E+R TG I G + D +W S W+ L VRWD+ +P+R+SPW+
Sbjct: 160 GMRFRMRFEGEEAPEQRFTGTIVGSENLDQLWPESNWRSLKVRWDEPSTIPRPDRVSPWK 339
Query: 1369 IELTSSVSGSHMSAPNAKRLKPCLPHVNPDYLVPNGSG 1256
IE SS + + KR +P +P V+P+ V G
Sbjct: 340 IEPASSPPVNPLPLSRVKRPRPNVPPVSPESSVLTKEG 453
Score = 36.3 bits (73), Expect(2) = 4e-023
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = -2 / +1
Query: 1693 NLGSLPNVAHAVATKSVFHIYYNPRLS 1613
+LG L HA+ TKS+F +YY PR S
Sbjct: 16 HLGVLATAWHAINTKSMFTVYYKPRTS 96
>gb|CD918964.1|CD918964 G608.111I19F010911 G608 Triticum aestivum cDNA clone G608111I19, mRNA
sequence
Length = 672
Score = 57.0 bits (118), Expect(3) = 1e-022
Identities = 19/31 (61%), Positives = 21/31 (67%)
Frame = -2 / +1
Query: 1456 WRGSKWKCLMVRWDDDVDFRQPNRISPWEIE 1364
W GSKW+CL VRWDD R+SPWEIE
Sbjct: 43 WPGSKWRCLQVRWDDGNHCNHQRRVSPWEIE 135
Score = 54.7 bits (113), Expect(3) = 1e-022
Identities = 24/47 (51%), Positives = 31/47 (65%)
Frame = -2 / +1
Query: 1336 MSAPNAKRLKPCLPHVNPDYLVPNGSGRPDFAESAQFHKVLQGQELL 1196
+SA ++KR K P N D V +G+G PD E+ FH+VLQGQELL
Sbjct: 169 LSASSSKRAKLYFPQGNLDAPVTDGNGYPDSVETGSFHRVLQGQELL 309
Score = 40.0 bits (81), Expect(3) = 1e-022
Identities = 17/28 (60%), Positives = 19/28 (67%)
Frame = -2 / +1
Query: 1036 FSYRCSGFGESPRFQKVLQGQEVFHPYR 953
F Y SGFGES RF +VLQGQE+ R
Sbjct: 436 FPYHSSGFGESLRFPEVLQGQEMSQALR 519
Database: Triticum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 3:01 PM
Number of letters in database: 367,240,239
Number of sequences in database: 636,343
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 1,947,392,208
Number of Sequences: 636343
Number of extensions: 33383691
Number of successful extensions: 159301
Number of sequences better than 1.0e-020: 27
length of database: 122,413,413
effective HSP length: 56
effective length of database: 86,778,205
effective search space used: 47033787110
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)