TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2440806.2.2
(1155 letters)
Database: Triticum_nucl_with_EST.fasta
636,343 sequences; 367,240,239 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AL810355.1|AL810355 AL810355 e:29 Triticum aestivum cDNA... 330 3e-090
gb|CD938589.1|CD938589 OV.110G14F010312 OV Triticum aestivu... 287 2e-076
gb|BJ208137.1|BJ208137 BJ208137 Y. Ogihara unpublished cDNA... 278 1e-073
gb|BJ245701.1|BJ245701 BJ245701 Y. Ogihara unpublished cDNA... 268 1e-070
gb|AL812363.1|AL812363 AL812363 e:310 Triticum aestivum cDN... 266 3e-070
gb|CK161286.1|CK161286 FGAS013852 Triticum aestivum FGAS: L... 258 5e-069
gb|CD898293.1|CD898293 G174.108K23F010821 G174 Triticum aes... 261 1e-068
gb|BJ247566.1|BJ247566 BJ247566 Y. Ogihara unpublished cDNA... 245 8e-064
gb|CV769371.1|CV769371 FGAS063762 Triticum aestivum FGAS: L... 243 3e-063
gb|CV769347.1|CV769347 FGAS063738 Triticum aestivum FGAS: L... 240 3e-062
gb|AL812716.1|AL812716 AL812716 e:310 Triticum aestivum cDN... 125 5e-045
gb|BQ903526.1|BQ903526 Ta03_15d09_R Ta03_AAFC_ECORC_Fusariu... 174 1e-042
gb|BJ267963.1|BJ267963 BJ267963 Y. Ogihara unpublished cDNA... 155 9e-037
gb|CA728781.1|CA728781 wdi1c.pk005.m2 wdi1c Triticum aestiv... 146 5e-034
gb|CA679978.1|CA679978 wlm4.pk0022.b3 wlm4 Triticum aestivu... 124 2e-027
gb|CA596211.1|CA596211 wpa1c.pk012.b17 wpa1c Triticum aesti... 107 2e-022
gb|BF484839.1|BF484839 WHE2320_C04_F08ZS Wheat pre-anthesis... 80 6e-021
gb|BJ247220.1|BJ247220 BJ247220 Y. Ogihara unpublished cDNA... 102 7e-021
>gb|AL810355.1|AL810355 AL810355 e:29 Triticum aestivum cDNA clone D07_e29_plate_1, mRNA
sequence
Length = 688
Score = 330 bits (715), Expect(2) = 3e-090
Identities = 141/192 (73%), Positives = 149/192 (77%)
Frame = -1 / -2
Query: 615 GAMKRLPWLMMVGFMLPPMAYMIQCV*SLFTTWKKP*RQRGIRCTSPRPKWLNATVTCIT 436
GAM R PWLMMVG LPPMAY+ QCV*SLFTTWKKP RQRGIRCTSP PKWLNATVTCI
Sbjct: 687 GAMNRFPWLMMVGSRLPPMAYICQCV*SLFTTWKKPKRQRGIRCTSPLPKWLNATVTCII 508
Query: 435 ASCGLSLLAPNSITWSWSVKWLLDTVMAVDPFTTSISPSEQLDMDTWSIHTLLDDSTETP 256
SC L APNSITWS VKWLLDTVMAV+P TTS+ PS QLDMDTWSIHTLL++ ETP
Sbjct: 507 LSCSSVLXAPNSITWSCLVKWLLDTVMAVEPLTTSMRPSAQLDMDTWSIHTLLEERMETP 328
Query: 255 SPSLRVRSP*CRFESRIMPPECALESWMXXXXXXXXXXXCSVICANMMCTCAPRPSIVLL 76
SPSLRVR P* ESRIMPPEC E WM CSVICA +MCTCAPRPSIVLL
Sbjct: 327 SPSLRVRRP*WCLESRIMPPECGTEWWMWTLWMITCLTPCSVICAPVMCTCAPRPSIVLL 148
Query: 75 WFTISSCRSSIT 40
FT+SS S +T
Sbjct: 147 LFTMSSWESLMT 112
Score = 281 bits (607), Expect(3) = 3e-088
Identities = 113/145 (77%), Positives = 120/145 (82%)
Frame = +2 / +2
Query: 182 SKAHSGGMIRDSKRHYGLRTRXXXXXXXXXXXXNVWIDHVSMSSCSDGLIDVVNGSTAIT 361
S HSGGMIRDSK HYG RTR +VWIDHVSMSSC+DGLIDVV+GSTAIT
Sbjct: 254 SVPHSGGMIRDSKHHYGRRTRSDGDGVSILSSSSVWIDHVSMSSCADGLIDVVSGSTAIT 433
Query: 362 VSNSHFTDHDHVMLFGASNDSPQDAVMQVTVAFNHFGRGLVQRMPRCRYGFFHVVNNDYT 541
VSNSHFT HDHVMLFGA N QD +MQVTVAFNHFG+GLVQRMPRCR+GFF VVNNDYT
Sbjct: 434 VSNSHFTKHDHVMLFGAXNTEEQDRMMQVTVAFNHFGKGLVQRMPRCRFGFFQVVNNDYT 613
Query: 542 HWIMYAIGGNMNPTIISQGNRFIAP 616
HW MYAIGGN +PTIISQGNRFIAP
Sbjct: 614 HWQMYAIGGNRDPTIISQGNRFIAP 688
Score = 107 bits (229), Expect(5) = 3e-027
Identities = 45/64 (70%), Positives = 51/64 (79%)
Frame = +1 / +1
Query: 271 VVQQRVDRPRVHVQLLRRADRRGERVDGHHRVQQPLHRPRPRDAVRRQQRQPAGRGDAGH 450
++QQRVDRPRVHVQL RR RRG+R+ HHRVQQPLH+ PRDAVRR Q AG+ DAGH
Sbjct: 343 LLQQRVDRPRVHVQLRRRPHRRGQRLHRHHRVQQPLHQA*PRDAVRRXQHGGAGQDDAGH 522
Query: 451 GGVQ 462
GVQ
Sbjct: 523 RGVQ 534
Score = 58.3 bits (121), Expect(3) = 4e-021
Identities = 22/33 (66%), Positives = 24/33 (72%)
Frame = -3 / -1
Query: 358 DGRRPVHHVDQPVGAAGHGHVVDPHVAGRQHGD 260
DG HVD+ VGAAGHGHVVDPH AG + GD
Sbjct: 430 DGGGAADHVDEAVGAAGHGHVVDPHAAGGEDGD 332
Score = 56.5 bits (117), Expect(3) = 3e-088
Identities = 25/31 (80%), Positives = 26/31 (83%)
Frame = +2 / +2
Query: 41 VIELRQELIVNHNKTIDGRGAQVHIMFAQIT 133
VI L QELIVN NKTIDGRGAQVHI AQ+T
Sbjct: 113 VIRLSQELIVNSNKTIDGRGAQVHITGAQMT 205
Score = 43.2 bits (88), Expect(3) = 4e-021
Identities = 17/20 (85%), Positives = 18/20 (90%)
Frame = -3 / -1
Query: 115 DVHLRAPPVDRLVVVHDQLL 56
DVHLRA PVDRLV VHD+LL
Sbjct: 187 DVHLRAAPVDRLVAVHDELL 128
Score = 43.2 bits (88), Expect(3) = 4e-021
Identities = 17/20 (85%), Positives = 17/20 (85%)
Frame = -3 / -1
Query: 487 LHQPAAEVVERHRDLHHRVL 428
LHQP AEVVERH DLHH VL
Sbjct: 559 LHQPLAEVVERHGDLHHPVL 500
Score = 29.0 bits (57), Expect(3) = 3e-088
Identities = 10/12 (83%), Positives = 10/12 (83%)
Frame = +2 / +1
Query: 5 DRPLWIVFARDM 40
DRPLWIVF R M
Sbjct: 76 DRPLWIVFGRSM 111
Score = 24.0 bits (46), Expect(5) = 3e-027
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = +3 / +2
Query: 6 TGRCGSCSRATW 41
TGRCGS S W
Sbjct: 77 TGRCGSSSGGPW 112
Score = 23.5 bits (45), Expect(2) = 3e-090
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = -1 / -3
Query: 39 MSRANTIHSGRS 4
M R TIHSGRS
Sbjct: 110 MDRPKTIHSGRS 75
Score = 23.5 bits (45), Expect(5) = 3e-027
Identities = 6/6 (100%), Positives = 6/6 (100%)
Frame = +3 / +3
Query: 477 GWCSGC 494
GWCSGC
Sbjct: 549 GWCSGC 566
Score = 23.5 bits (45), Expect(5) = 3e-027
Identities = 8/10 (80%), Positives = 9/10 (90%)
Frame = +1 / +1
Query: 181 LQGALGRHDP 210
L+ ALGRHDP
Sbjct: 253 LRAALGRHDP 282
Score = 21.7 bits (41), Expect(5) = 3e-027
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +1 / +1
Query: 523 GEQRLHAL 546
GEQRLHAL
Sbjct: 595 GEQRLHAL 618
>gb|CD938589.1|CD938589 OV.110G14F010312 OV Triticum aestivum cDNA clone OV110G14, mRNA
sequence
Length = 708
Score = 287 bits (621), Expect = 2e-076
Identities = 114/216 (52%), Positives = 144/216 (66%)
Frame = +2 / +2
Query: 179 DSKAHSGGMIRDSKRHYGLRTRXXXXXXXXXXXXNVWIDHVSMSSCSDGLIDVVNGSTAI 358
D + M+R S HYG RT +VW+DH +S+C+DGL+D + GSTAI
Sbjct: 59 DCRPTGNAMVRSSPSHYGWRTMADGDAVSIFGASHVWVDHCWVSNCADGLVDAIMGSTAI 238
Query: 359 TVSNSHFTDHDHVMLFGASNDSPQDAVMQVTVAFNHFGRGLVQRMPRCRYGFFHVVNNDY 538
TVSN++FT H+ VML G S+ +D MQVT+AFNHFG GL+QRMPRCR+G+FHVVNNDY
Sbjct: 239 TVSNNYFTHHNEVMLLGHSDSYLKDKAMQVTIAFNHFGEGLIQRMPRCRHGYFHVVNNDY 418
Query: 539 THWIMYAIGGNMNPTIISQGNRFIAPDDPNAKEVTKREYTPYKDYKEWVWKSQGDVMMNG 718
THW MYAIGG+ PTI SQGNR++AP +P AKEVTKR T +K W W+S+GD+++NG
Sbjct: 419 THWEMYAIGGSAEPTINSQGNRYLAPTNPFAKEVTKRVETAQTTWKAWNWRSEGDMLLNG 598
Query: 719 AFFNESGGQNERKYDRFDFIPAKHGRYVGQLTRFAG 826
AFF SG Y R + AK V +T AG
Sbjct: 599 AFFTPSGAGASASYSRAXSLGAKSSXMVATITSGAG 706
Score = 193 bits (417), Expect = 2e-048
Identities = 97/189 (51%), Positives = 108/189 (57%)
Frame = -1 / -1
Query: 738 PDSLKKAPFIMTSPCDFHTHSL*SLYGVYSRLVTSLALGSSGAMKRLPWLMMVGFMLPPM 559
PD +KKAPF SP D + ++ V + VTSLA G GA R PWL+MVG LPPM
Sbjct: 618 PDGVKKAPFSSMSPSDLQFQAFHVVWAVSTLFVTSLAKGLVGAR*RFPWLLMVGSALPPM 439
Query: 558 AYMIQCV*SLFTTWKKP*RQRGIRCTSPRPKWLNATVTCITASCGLSLLAPNSITWSWSV 379
AY+ Q V*SLFTTWK P GI SP PKWL A VTCI S L P SIT W V
Sbjct: 438 AYISQWV*SLFTTWK*PCLHLGILWMSPSPKWLKAIVTCIALSLR*ESL*PRSITSLWWV 259
Query: 378 KWLLDTVMAVDPFTTSISPSEQLDMDTWSIHTLLDDSTETPSPSLRVRSP*CRFESRIMP 199
K LL+TVMAV+P S PS QL+ WS T L ET SPS VR P* E R M
Sbjct: 258 K*LLETVMAVEPIMASTRPSAQLETQQWSTQTWLAPKMETASPSAMVRHP*WLGELRTMA 79
Query: 198 PECALESWM 172
+SWM
Sbjct: 78 LPVGRQSWM 52
>gb|BJ208137.1|BJ208137 BJ208137 Y. Ogihara unpublished cDNA library, Wh Triticum aestivum
cDNA clone wh6p12 5', mRNA sequence
Length = 585
Score = 278 bits (601), Expect = 1e-073
Identities = 106/179 (59%), Positives = 133/179 (74%)
Frame = +2 / +3
Query: 203 MIRDSKRHYGLRTRXXXXXXXXXXXXNVWIDHVSMSSCSDGLIDVVNGSTAITVSNSHFT 382
M+R S HYG RT +VW+DH S+S+C+DGL+D + GSTAITVSN++FT
Sbjct: 15 MVRSSPSHYGWRTMADGDAVSIFGASHVWVDHCSLSNCADGLVDAIMGSTAITVSNNYFT 194
Query: 383 DHDHVMLFGASNDSPQDAVMQVTVAFNHFGRGLVQRMPRCRYGFFHVVNNDYTHWIMYAI 562
H+ VML G S+ +D MQVT+AFNHFG GL+QRMPRCR+G+FHVVNNDYTHW MYAI
Sbjct: 195 HHNEVMLLGHSDSYLKDKAMQVTIAFNHFGEGLIQRMPRCRHGYFHVVNNDYTHWEMYAI 374
Query: 563 GGNMNPTIISQGNRFIAPDDPNAKEVTKREYTPYKDYKEWVWKSQGDVMMNGAFFNESG 739
GG+ PTI SQGNR++AP +P AKEVTKR T +K W W+S+GD+++NGAFF SG
Sbjct: 375 GGSAEPTINSQGNRYLAPTNPFAKEVTKRVETAQTTWKAWNWRSEGDMLLNGAFFTPSG 551
Score = 188 bits (405), Expect = 1e-046
Identities = 94/179 (52%), Positives = 105/179 (58%)
Frame = -1 / -3
Query: 738 PDSLKKAPFIMTSPCDFHTHSL*SLYGVYSRLVTSLALGSSGAMKRLPWLMMVGFMLPPM 559
PD +KKAPF SP D + ++ V + VTSLA G GA R PWL+MVG LPPM
Sbjct: 550 PDGVKKAPFSSMSPSDLQFQAFHVVWAVSTLFVTSLAKGLVGAR*RFPWLLMVGSALPPM 371
Query: 558 AYMIQCV*SLFTTWKKP*RQRGIRCTSPRPKWLNATVTCITASCGLSLLAPNSITWSWSV 379
AY+ Q V*SLFTTWK P GI SP PKWL A VTCI S L P SIT W V
Sbjct: 370 AYISQWV*SLFTTWK*PCLHLGILWMSPSPKWLKAIVTCIALSLR*ESL*PRSITSLWWV 191
Query: 378 KWLLDTVMAVDPFTTSISPSEQLDMDTWSIHTLLDDSTETPSPSLRVRSP*CRFESRIM 202
K LL+TVMAV+P S PS QL+ + WS T L ET SPS VR P* E R M
Sbjct: 190 K*LLETVMAVEPMMASTRPSAQLEREQWSTQTWLAPKMETASPSAMVRHP*WLGELRTM 14
>gb|BJ245701.1|BJ245701 BJ245701 Y. Ogihara unpublished cDNA library, Wh_f Triticum
aestivum cDNA clone whf1m10 5', mRNA sequence
Length = 614
Score = 268 bits (579), Expect = 1e-070
Identities = 103/155 (66%), Positives = 127/155 (81%)
Frame = +2 / +2
Query: 395 VMLFGASNDSPQDAVMQVTVAFNHFGRGLVQRMPRCRYGFFHVVNNDYTHWIMYAIGGNM 574
VMLFG+S+ +P+D +MQ+TVAFNHFGRGLVQRMPRCR+GFFHVVNNDYTHW+MYAIGG+
Sbjct: 8 VMLFGSSDSNPKDEIMQITVAFNHFGRGLVQRMPRCRWGFFHVVNNDYTHWLMYAIGGSK 187
Query: 575 NPTIISQGNRFIAPDDPNAKEVTKREYTPYKDYKEWVWKSQGDVMMNGAFFNESGGQNER 754
NPTIISQGNR+IAP + AK +TKR Y ++K WVW S+GD+M+N A F +SGG N+R
Sbjct: 188 NPTIISQGNRYIAPPNLAAKLITKRLYAEEAEWKNWVWHSEGDLMLNDAVFTDSGGPNQR 367
Query: 755 KYDRFDFIPAKHGRYVGQLTRFAGPLKCIVGQPC* 859
K+++ D IP K G YV +LTRFAG L C G+PC*
Sbjct: 368 KFEKDDLIPPKPGSYVTRLTRFAGCLPCKPGKPC* 472
Score = 176 bits (379), Expect = 4e-043
Identities = 85/159 (53%), Positives = 95/159 (59%)
Frame = -1 / -3
Query: 870 AAVY*HGWPTMHLSGPAKRVS*PT*RPCLAGMKSNLSYLRSFWPPDSLKKAPFIMTSPCD 691
A * G P +H PAKRVS T P L GM+S+ S PP S+K A + SP +
Sbjct: 483 ATKV*QGLPGLHGKQPAKRVSLVTYDPGLGGMRSSFSNFLWLGPPLSVKTASLSIRSPSE 304
Query: 690 FHTHSL*SLYGVYSRLVTSLALGSSGAMKRLPWLMMVGFMLPPMAYMIQCV*SLFTTWKK 511
HT S YSR V S A GAM R PWLMMVGF+LPPMAYM Q V*SLFTTWK
Sbjct: 303 CHTQFFHSASSAYSRFVISFAARFGGAM*RFPWLMMVGFLLPPMAYMSQWV*SLFTTWKN 124
Query: 510 P*RQRGIRCTSPRPKWLNATVTCITASCGLSLLAPNSIT 394
P R GI CT P PKWL ATV C+ +S GL L P S+T
Sbjct: 123 PHRHLGILCTRPLPKWLKATVICMISSLGLLSLEPKSMT 7
>gb|AL812363.1|AL812363 AL812363 e:310 Triticum aestivum cDNA clone A04_e310_plate_3, mRNA
sequence
Length = 529
Score = 266 bits (576), Expect = 3e-070
Identities = 101/172 (58%), Positives = 128/172 (74%)
Frame = +2 / +3
Query: 203 MIRDSKRHYGLRTRXXXXXXXXXXXXNVWIDHVSMSSCSDGLIDVVNGSTAITVSNSHFT 382
M+R S HYG RT +VW+DH S+S+C+DGL+D + GSTAITVSN++FT
Sbjct: 12 MVRSSPSHYGWRTMADGDAVSIFGASHVWVDHCSLSNCADGLVDAIMGSTAITVSNNYFT 191
Query: 383 DHDHVMLFGASNDSPQDAVMQVTVAFNHFGRGLVQRMPRCRYGFFHVVNNDYTHWIMYAI 562
H+ VML G S+ +D MQVT+AFNHFG GL+QRMPRCR+G+FHVVNNDYTHW MYAI
Sbjct: 192 HHNEVMLLGHSDSYLKDKAMQVTIAFNHFGEGLIQRMPRCRHGYFHVVNNDYTHWEMYAI 371
Query: 563 GGNMNPTIISQGNRFIAPDDPNAKEVTKREYTPYKDYKEWVWKSQGDVMMNG 718
GG+ PTI SQGNR++AP +P AKEVTKR T +K W W+S+GD+++NG
Sbjct: 372 GGSAEPTINSQGNRYLAPTNPFAKEVTKRVETAQTTWKAWNWRSEGDMLLNG 527
Score = 177 bits (382), Expect = 2e-043
Identities = 90/173 (52%), Positives = 100/173 (57%)
Frame = -1 / -1
Query: 720 APFIMTSPCDFHTHSL*SLYGVYSRLVTSLALGSSGAMKRLPWLMMVGFMLPPMAYMIQC 541
APF SP D + ++ V + VTSLA G GA R PWL+MVG LPPMAY+ Q
Sbjct: 529 APFSSMSPSDLQFQAFHVVWAVSTLFVTSLAKGLVGAR*RFPWLLMVGSALPPMAYISQW 350
Query: 540 V*SLFTTWKKP*RQRGIRCTSPRPKWLNATVTCITASCGLSLLAPNSITWSWSVKWLLDT 361
V*SLFTTWK P GI SP PKWL A VTCI S L P SIT W VK LL+T
Sbjct: 349 V*SLFTTWK*PCLHLGILWMSPSPKWLKAMVTCIALSLR*ESLWPKSITSLWWVK*LLET 170
Query: 360 VMAVDPFTTSISPSEQLDMDTWSIHTLLDDSTETPSPSLRVRSP*CRFESRIM 202
VMAV+P S PS QL+ + WS T L ET SPS VR P* E R M
Sbjct: 169 VMAVEPMMASTRPSAQLEREQWSTQTWLAPKMETASPSAMVRHP*WLGELRTM 11
>gb|CK161286.1|CK161286 FGAS013852 Triticum aestivum FGAS: Library 4 Gate 8 Triticum
aestivum cDNA, mRNA sequence
Length = 899
Score = 258 bits (557), Expect(2) = 5e-069
Identities = 102/158 (64%), Positives = 122/158 (77%)
Frame = +2 / +3
Query: 386 HDHVMLFGASNDSPQDAVMQVTVAFNHFGRGLVQRMPRCRYGFFHVVNNDYTHWIMYAIG 565
H+ VMLFGA++ +D VMQVTVAFNHFGRGLVQRMPRCRYGFFHVVNNDYT+W+MYAIG
Sbjct: 69 HNDVMLFGATDGKEEDKVMQVTVAFNHFGRGLVQRMPRCRYGFFHVVNNDYTNWLMYAIG 248
Query: 566 GNMNPTIISQGNRFIAPDDPNAKEVTKREYTPYKDYKEWVWKSQGDVMMNGAFFNESGGQ 745
G+ PTI+SQGNR+ AP + AKE TKREY ++K WVW S+GD+M+N AFF SGG+
Sbjct: 249 GSSAPTIVSQGNRYRAPPNMAAKEATKREYAAESEWKNWVWTSEGDLMINDAFFITSGGK 428
Query: 746 NERKYDRFDFIPAKHGRYVGQLTRFAGPLKCIVGQPC* 859
+K + D + K G YV +LTRFAGPL C G PC*
Sbjct: 429 ISQKLNGKDLLKPKPGEYVRRLTRFAGPLDCNAGSPC* 542
Score = 188 bits (406), Expect(2) = 2e-047
Identities = 89/156 (57%), Positives = 98/156 (62%)
Frame = -1 / -2
Query: 852 GWPTMHLSGPAKRVS*PT*RPCLAGMKSNLSYLRSFWPPDSLKKAPFIMTSPCDFHTHSL 673
G P + +GPAKRVS T P L +S +PPD +KKA FI+ SP D HT
Sbjct: 535 GLPALQSNGPAKRVSLLTYSPGLGLRRSLPLSFWLIFPPDVMKKASFIIRSPSDVHTQFF 356
Query: 672 *SLYGVYSRLVTSLALGSSGAMKRLPWLMMVGFMLPPMAYMIQCV*SLFTTWKKP*RQRG 493
S YSRLV SLA GA+ R PWL MVG +LPPMAYM Q V*SL TTWKKP*RQRG
Sbjct: 355 HSDSAAYSRLVASLAAMLGGALYRFPWLTMVGALLPPMAYMSQLV*SLLTTWKKP*RQRG 176
Query: 492 IRCTSPRPKWLNATVTCITASCGLSLLAPNSITWSW 385
I CT P PKWL ATVTCIT S +AP SIT W
Sbjct: 175 ILCTRPLPKWLKATVTCITLSSSFPSVAPKSITSLW 68
Score = 25.4 bits (49), Expect(2) = 5e-069
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = +2 / +2
Query: 332 DVVNGSTAITVSNSH 376
DVV TA+TVSN+H
Sbjct: 14 DVVAMXTAVTVSNTH 58
Score = 22.6 bits (43), Expect(2) = 2e-047
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = -1 / -3
Query: 375 WLLDTVMAVDPFTTS 331
W+L+TV AV TTS
Sbjct: 57 WVLETVTAVXMATTS 13
>gb|CD898293.1|CD898293 G174.108K23F010821 G174 Triticum aestivum cDNA clone G174108K23,
mRNA sequence
Length = 734
Score = 261 bits (564), Expect = 1e-068
Identities = 106/185 (57%), Positives = 130/185 (70%)
Frame = +2 / +1
Query: 317 SDGLIDVVNGSTAITVSNSHFTDHDHVMLFGASNDSPQDAVMQVTVAFNHFGRGLVQRMP 496
SDGL+D + GSTAITVSN++FT H+ VML G S+ +D MQVT+AFNHFG GL+QRMP
Sbjct: 7 SDGLVDAIMGSTAITVSNNYFTHHNEVMLLGHSDSYLKDKAMQVTIAFNHFGEGLIQRMP 186
Query: 497 RCRYGFFHVVNNDYTHWIMYAIGGNMNPTIISQGNRFIAPDDPNAKEVTKREYTPYKDYK 676
RCR+G+FHVVNNDYTHW MYAIGG+ PTI SQGNR++AP +P AKEVTKR T +K
Sbjct: 187 RCRHGYFHVVNNDYTHWEMYAIGGSAEPTINSQGNRYLAPTNPFAKEVTKRVETAQTTWK 366
Query: 677 EWVWKSQGDVMMNGAFFNESGGQNERKYDRFDFIPAKHGRYVGQLTRFAGPLKCIVGQPC 856
W W+S+GD+++NGAFF SG Y R + AK V +T AG L C G C
Sbjct: 367 AWNWRSEGDMLLNGAFFTPSGAGASASYSRASSLGAKSSSMVATITSGAGALSCHKGSSC 546
Query: 857 **TAA 871
* + A
Sbjct: 547 *HSTA 561
Score = 156 bits (336), Expect = 3e-037
Identities = 77/141 (54%), Positives = 86/141 (60%)
Frame = -1 / -1
Query: 738 PDSLKKAPFIMTSPCDFHTHSL*SLYGVYSRLVTSLALGSSGAMKRLPWLMMVGFMLPPM 559
PD +KKAPF SP D + + V + VTSLA G GA R PWL+MVG LPPM
Sbjct: 428 PDGVKKAPFSSISPSDLQFQAFQVV*AVSTLFVTSLAKGLVGAR*RFPWLLMVGSALPPM 249
Query: 558 AYMIQCV*SLFTTWKKP*RQRGIRCTSPRPKWLNATVTCITASCGLSLLAPNSITWSWSV 379
AY+ Q V*SLFTTWK P GI SP PKWL A VTCI S L P+SIT W V
Sbjct: 248 AYISQWV*SLFTTWK*PCLHLGILWMSPSPKWLKAMVTCIALSLR*ESL*PSSITSLWWV 69
Query: 378 KWLLDTVMAVDPFTTSISPSE 316
K LLDTVMAV+P S PS+
Sbjct: 68 K*LLDTVMAVEPMMASTRPSD 6
>gb|BJ247566.1|BJ247566 BJ247566 Y. Ogihara unpublished cDNA library, Wh_f Triticum
aestivum cDNA clone whf2m10 5', mRNA sequence
Length = 453
Score = 245 bits (529), Expect = 8e-064
Identities = 94/146 (64%), Positives = 116/146 (79%)
Frame = +2 / +2
Query: 422 SPQDAVMQVTVAFNHFGRGLVQRMPRCRYGFFHVVNNDYTHWIMYAIGGNMNPTIISQGN 601
+P+ +MQ+TVAFNHFGRGLVQRMPRCR+GFFHVVNNDYTHW+MYAIGG+ NPTI SQGN
Sbjct: 11 TPRHEIMQITVAFNHFGRGLVQRMPRCRWGFFHVVNNDYTHWLMYAIGGSKNPTIXSQGN 190
Query: 602 RFIAPDDPNAKEVTKREYTPYKDYKEWVWKSQGDVMMNGAFFNESGGQNERKYDRFDFIP 781
R+IAP + AK +TKR Y ++K WVW S+GD+M+N A F +SGG N+RK+++ D IP
Sbjct: 191 RYIAPPNLAAKLITKRLYAEEAEWKNWVWHSEGDLMLNDAVFTDSGGPNQRKFEKDDLIP 370
Query: 782 AKHGRYVGQLTRFAGPLKCIVGQPC* 859
K G YV +LTR AG L C G+PC*
Sbjct: 371 PKPGSYVTRLTRXAGCLPCKPGKPC* 448
Score = 167 bits (359), Expect = 2e-040
Identities = 78/148 (52%), Positives = 90/148 (60%)
Frame = -1 / -1
Query: 858 *HGWPTMHLSGPAKRVS*PT*RPCLAGMKSNLSYLRSFWPPDSLKKAPFIMTSPCDFHTH 679
* G P +H PAKRVS T P L GM+S+ S PP S+K A + SP + HT
Sbjct: 447 *QGLPGLHGKQPAKRVSLVTYDPGLGGMRSSFSNFLWLGPPLSVKTASLSIRSPSECHTQ 268
Query: 678 SL*SLYGVYSRLVTSLALGSSGAMKRLPWLMMVGFMLPPMAYMIQCV*SLFTTWKKP*RQ 499
S YSR V S A GAM R PWLMMVGF+LPPMAYM Q V*SLFTTWK P R
Sbjct: 267 FFHSASSAYSRFVISFAARFGGAMXRFPWLMMVGFLLPPMAYMSQWV*SLFTTWKNPHRH 88
Query: 498 RGIRCTSPRPKWLNATVTCITASCGLSL 415
GI CT P PKWL ATV C+ + G+++
Sbjct: 87 LGILCTRPLPKWLKATVICMISCLGVAV 4
>gb|CV769371.1|CV769371 FGAS063762 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 852
Score = 243 bits (525), Expect = 3e-063
Identities = 96/145 (66%), Positives = 113/145 (77%)
Frame = +2 / +1
Query: 425 PQDAVMQVTVAFNHFGRGLVQRMPRCRYGFFHVVNNDYTHWIMYAIGGNMNPTIISQGNR 604
P+D VMQVTVAFNHFGRGLVQRMPRCRYGFFHVVNNDYT+W+MYAIGG+ PTI+SQGNR
Sbjct: 112 PEDKVMQVTVAFNHFGRGLVQRMPRCRYGFFHVVNNDYTNWLMYAIGGSSAPTILSQGNR 291
Query: 605 FIAPDDPNAKEVTKREYTPYKDYKEWVWKSQGDVMMNGAFFNESGGQNERKYDRFDFIPA 784
+ AP + AKE TKREY ++K WVW S+GD+M+N A+F SGG+ +K + D I
Sbjct: 292 YRAPPNMAAKEATKREYAAESEWKNWVWVSEGDLMVNDAYFTTSGGKIGQKLNGKDLIKP 471
Query: 785 KHGRYVGQLTRFAGPLKCIVGQPC* 859
K G YV +LTRFAGPL C G PC*
Sbjct: 472 KQGEYVRRLTRFAGPLDCNQGSPC* 546
Score = 180 bits (387), Expect = 3e-044
Identities = 85/144 (59%), Positives = 93/144 (64%)
Frame = -1 / -2
Query: 852 GWPTMHLSGPAKRVS*PT*RPCLAGMKSNLSYLRSFWPPDSLKKAPFIMTSPCDFHTHSL 673
G P + +GPAKRVS T PCL M+S +PPD +K A F + SP D HT
Sbjct: 539 GLPWLQSNGPAKRVSLLTYSPCLGLMRSLPLSFWPIFPPDVVK*ASFTIRSPSDTHTQFF 360
Query: 672 *SLYGVYSRLVTSLALGSSGAMKRLPWLMMVGFMLPPMAYMIQCV*SLFTTWKKP*RQRG 493
S YSRLV SLA GA+ R PWL MVG +LPPMAYM Q V*SL TTWKKP*RQRG
Sbjct: 359 HSDSAAYSRLVASLAAMLGGAL*RFPWLRMVGALLPPMAYMSQLV*SLLTTWKKP*RQRG 180
Query: 492 IRCTSPRPKWLNATVTCITASCGL 421
I CT P PKWL ATVTCIT S GL
Sbjct: 179 ILCTRPLPKWLKATVTCITLSSGL 108
>gb|CV769347.1|CV769347 FGAS063738 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 864
Score = 240 bits (518), Expect = 3e-062
Identities = 95/145 (65%), Positives = 112/145 (77%)
Frame = +2 / +3
Query: 425 PQDAVMQVTVAFNHFGRGLVQRMPRCRYGFFHVVNNDYTHWIMYAIGGNMNPTIISQGNR 604
P+D VMQVTVAFNHFGRGLVQRMPRCRYGFFHVVNNDYT+W+MYAIGG+ PTI+SQGNR
Sbjct: 114 PEDKVMQVTVAFNHFGRGLVQRMPRCRYGFFHVVNNDYTNWLMYAIGGSSAPTILSQGNR 293
Query: 605 FIAPDDPNAKEVTKREYTPYKDYKEWVWKSQGDVMMNGAFFNESGGQNERKYDRFDFIPA 784
+ AP + AKE TKREY ++K WVW S+GD+M+N A+F SGG+ +K + D I
Sbjct: 294 YRAPPNMAAKEATKREYAAESEWKNWVWVSEGDLMVNDAYFTTSGGKIGQKLNGKDLIKP 473
Query: 785 KHGRYVGQLTRFAGPLKCIVGQPC* 859
K G YV +LTRFAGPL C PC*
Sbjct: 474 KQGEYVRRLTRFAGPLDCNQXSPC* 548
Score = 176 bits (378), Expect = 6e-043
Identities = 83/137 (60%), Positives = 90/137 (65%)
Frame = -1 / -3
Query: 831 SGPAKRVS*PT*RPCLAGMKSNLSYLRSFWPPDSLKKAPFIMTSPCDFHTHSL*SLYGVY 652
+GPAKRVS T PCL M+S +PPD +K A F + SP D HT S Y
Sbjct: 520 NGPAKRVSLLTYSPCLGLMRSLPLSFWPIFPPDVVK*ASFTIRSPSDTHTQFFHSDSAAY 341
Query: 651 SRLVTSLALGSSGAMKRLPWLMMVGFMLPPMAYMIQCV*SLFTTWKKP*RQRGIRCTSPR 472
SRLV SLA GA+ R PWL MVG +LPPMAYM Q V*SL TTWKKP*RQRGI CT P
Sbjct: 340 SRLVASLAAMLGGAL*RFPWLRMVGALLPPMAYMSQLV*SLLTTWKKP*RQRGILCTRPL 161
Query: 471 PKWLNATVTCITASCGL 421
PKWL ATVTCIT S GL
Sbjct: 160 PKWLKATVTCITLSSGL 110
>gb|AL812716.1|AL812716 AL812716 e:310 Triticum aestivum cDNA clone H11_e310_plate_7, mRNA
sequence
Length = 540
Score = 125 bits (267), Expect(3) = 5e-045
Identities = 45/62 (72%), Positives = 53/62 (85%)
Frame = +2 / +3
Query: 440 MQVTVAFNHFGRGLVQRMPRCRYGFFHVVNNDYTHWIMYAIGGNMNPTIISQGNRFIAPD 619
+QVT+ FNHFG GL+QRMPRCR G+FHV+NNDYTHW MYAIGG+ PTI SQGNR++AP
Sbjct: 255 LQVTIPFNHFGEGLIQRMPRCRRGYFHVLNNDYTHWEMYAIGGSAEPTINSQGNRYLAPI 434
Query: 620 DP 625
P
Sbjct: 435 QP 440
Score = 84.5 bits (178), Expect(3) = 6e-028
Identities = 37/61 (60%), Positives = 40/61 (65%)
Frame = -1 / -3
Query: 624 GSSGAMKRLPWLMMVGFMLPPMAYMIQCV*SLFTTWKKP*RQRGIRCTSPRPKWLNATVT 445
G GA R PWL+MVG LPPMAY+ Q V*SLF+TWK P GI SP PKWL VT
Sbjct: 439 GWIGAR*RFPWLLMVGSALPPMAYISQWV*SLFSTWK*PRLHLGILWMSPSPKWLKGMVT 260
Query: 444 C 442
C
Sbjct: 259 C 257
Score = 54.7 bits (113), Expect(3) = 6e-028
Identities = 25/46 (54%), Positives = 29/46 (63%)
Frame = -1 / -1
Query: 414 LAPNSITWSWSVKWLLDTVMAVDPFTTSISPSEQLDMDTWSIHTLL 277
L P SIT W VK LL+TVMAV+P S PS QL+ + WS T L
Sbjct: 228 LWPKSITSLWWVK*LLETVMAVEPMMASTRPSAQLEREQWSTQTWL 91
Score = 50.1 bits (103), Expect(3) = 5e-045
Identities = 18/35 (51%), Positives = 26/35 (74%)
Frame = +2 / +1
Query: 620 DPNAKEVTKREYTPYKDYKEWVWKSQGDVMMNGAF 724
+P AKEVTKR + +K W W+S+GD+++NGAF
Sbjct: 436 NPFAKEVTKRVESAQTTWKAWNWRSEGDMLLNGAF 540
Score = 46.0 bits (94), Expect(3) = 5e-045
Identities = 23/55 (41%), Positives = 32/55 (58%)
Frame = +1 / +1
Query: 277 QQRVDRPRVHVQLLRRADRRGERVDGHHRVQQPLHRPRPRDAVRRQQRQPAGRGD 441
Q R+ RP + +QL RR RR + HH +QQ LH P+ DA+ Q P G+G+
Sbjct: 91 QPRLGRPLLPLQLRRRPRRRHHGLHRHHCLQQLLHPPQ*GDALGPQ*LLPQGQGN 255
Score = 24.4 bits (47), Expect(3) = 6e-028
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = -1 / -2
Query: 723 KAPFIMTSPCDFHTHSL*SLYGVYSRLVTSLALG 622
KAP SP D + ++ + + VTSLA G
Sbjct: 539 KAPLSSMSPSDLQFQAFHVVWALSTLFVTSLAKG 438
>gb|BQ903526.1|BQ903526 Ta03_15d09_R
Ta03_AAFC_ECORC_Fusarium_graminearum_inoculated_wheat_he
ads Triticum aestivum cDNA clone Ta03_15d09, mRNA
sequence
Length = 367
Score = 174 bits (375), Expect = 1e-042
Identities = 66/90 (73%), Positives = 76/90 (84%)
Frame = +2 / -1
Query: 284 VWIDHVSMSSCSDGLIDVVNGSTAITVSNSHFTDHDHVMLFGASNDSPQDAVMQVTVAFN 463
VW+DH+SM +C DG+IDVV STA+TVSN+H H+ VMLFGAS+ P+D VMQVTVAFN
Sbjct: 271 VWVDHLSMDNCEDGMIDVVAMSTAVTVSNTHLAHHNDVMLFGASDHKPEDKVMQVTVAFN 92
Query: 464 HFGRGLVQRMPRCRYGFFHVVNNDYTHWIM 553
HFGRGLVQRMP CRYGFFHVVNN YT W+M
Sbjct: 91 HFGRGLVQRMPXCRYGFFHVVNNXYTBWLM 2
Score = 153 bits (328), Expect = 4e-036
Identities = 67/102 (65%), Positives = 72/102 (70%)
Frame = -1 / +3
Query: 552 MIQCV*SLFTTWKKP*RQRGIRCTSPRPKWLNATVTCITASCGLSLLAPNSITWSWSVKW 373
M Q V* L TTWKKP*RQ GI CT P PKWL ATVTCIT S GL LAP SIT W +W
Sbjct: 3 MSQXV*XLLTTWKKP*RQXGILCTRPLPKWLKATVTCITLSSGLWSLAPKSITSLWWARW 182
Query: 372 LLDTVMAVDPFTTSISPSEQLDMDTWSIHTLLDDSTETPSPS 247
+L+TV AVD TTSI PS QL M+ WS HTL+ ETPSPS
Sbjct: 183 VLETVTAVDMATTSIMPSSQLSMERWSTHTLVALKMETPSPS 308
>gb|BJ267963.1|BJ267963 BJ267963 Y. Ogihara unpublished cDNA library, Wh_oh Triticum
aestivum cDNA clone whoh14e12 5', mRNA sequence
Length = 654
Score = 155 bits (333), Expect = 9e-037
Identities = 64/121 (52%), Positives = 78/121 (64%)
Frame = +2 / +1
Query: 509 GFFHVVNNDYTHWIMYAIGGNMNPTIISQGNRFIAPDDPNAKEVTKREYTPYKDYKEWVW 688
G+FHVVNNDYTHW MYAIGG+ PTI SQGNR++AP +P AKEVTKR T +K W W
Sbjct: 25 GYFHVVNNDYTHWEMYAIGGSAEPTINSQGNRYLAPTNPFAKEVTKRVETAQTTWKAWNW 204
Query: 689 KSQGDVMMNGAFFNESGGQNERKYDRFDFIPAKHGRYVGQLTRFAGPLKCIVGQPC**TA 868
+S+GD+++NGAFF SG Y R + AK V +T AG L C G C* +
Sbjct: 205 RSEGDMLLNGAFFTPSGAGASASYSRASSLGAKSSSMVATITSGAGALSCHKGSSC*HST 384
Query: 869 A 871
A
Sbjct: 385 A 387
>gb|CA728781.1|CA728781 wdi1c.pk005.m2 wdi1c Triticum aestivum cDNA clone wdi1c.pk005.m2 5'
end, mRNA sequence
Length = 589
Score = 146 bits (313), Expect = 5e-034
Identities = 55/90 (61%), Positives = 67/90 (74%)
Frame = +2 / +2
Query: 497 RCRYGFFHVVNNDYTHWIMYAIGGNMNPTIISQGNRFIAPDDPNAKEVTKREYTPYKDYK 676
RCR+G+FHVVNNDYTHW MYAIGG+ PTI SQGNR++AP +P AKEVTKR T +K
Sbjct: 11 RCRHGYFHVVNNDYTHWEMYAIGGSAEPTINSQGNRYLAPTNPFAKEVTKRVETAQTTWK 190
Query: 677 EWVWKSQGDVMMNGAFFNESGGQNERKYDR 766
W W+S+GD+++NGAFF SG Y R
Sbjct: 191 AWNWRSEGDMLLNGAFFTPSGAGASASYSR 280
>gb|CA679978.1|CA679978 wlm4.pk0022.b3 wlm4 Triticum aestivum cDNA clone wlm4.pk0022.b3 5'
end, mRNA sequence
Length = 602
Score = 124 bits (265), Expect = 2e-027
Identities = 51/91 (56%), Positives = 63/91 (69%)
Frame = +2 / +1
Query: 587 ISQGNRFIAPDDPNAKEVTKREYTPYKDYKEWVWKSQGDVMMNGAFFNESGGQNERKYDR 766
+SQGNR+ AP + AKEVTKR+Y P ++K WVW S GD+M+N A+F SGGQ +K +
Sbjct: 1 LSQGNRYRAPPNMAAKEVTKRDYAPESEWKNWVWISDGDLMINDAYFTTSGGQIGQKLNG 180
Query: 767 FDFIPAKHGRYVGQLTRFAGPLKCIVGQPC* 859
D I K G YV +LTRFAGPL C G PC*
Sbjct: 181 KDLIKPKPGEYVRRLTRFAGPLDCNPGSPC* 273
>gb|CA596211.1|CA596211 wpa1c.pk012.b17 wpa1c Triticum aestivum cDNA clone wpa1c.pk012.b17
5' end, mRNA sequence
Length = 541
Score = 107 bits (229), Expect = 2e-022
Identities = 43/82 (52%), Positives = 57/82 (69%)
Frame = +2 / +2
Query: 614 PDDPNAKEVTKREYTPYKDYKEWVWKSQGDVMMNGAFFNESGGQNERKYDRFDFIPAKHG 793
P + AK +TKR Y ++K WVW S+GD+M+N A F +SGG N+RK+++ D IP K G
Sbjct: 2 PPNLAAKLITKRLYAEEAEWKNWVWHSEGDLMLNDAVFADSGGPNQRKFEKDDLIPPKPG 181
Query: 794 RYVGQLTRFAGPLKCIVGQPC* 859
YV +LTRFAG L C G+PC*
Sbjct: 182 SYVTRLTRFAGCLPCKPGKPC* 247
>gb|BF484839.1|BF484839 WHE2320_C04_F08ZS Wheat pre-anthesis spike cDNA library Triticum
aestivum cDNA clone WHE2320_C04_F08, mRNA sequence
Length = 368
Score = 79.9 bits (168), Expect(2) = 6e-021
Identities = 32/70 (45%), Positives = 42/70 (60%)
Frame = +2 / +1
Query: 194 SGGMIRDSKRHYGLRTRXXXXXXXXXXXXNVWIDHVSMSSCSDGLIDVVNGSTAITVSNS 373
SGG + + H +RTR VW+DH+SM +C DG+IDVV STA+TVSN+
Sbjct: 157 SGGNVSMTATHSTIRTRADGDGVSIFNATKVWVDHLSMDNCEDGMIDVVAMSTAVTVSNT 336
Query: 374 HFTDHDHVML 403
H H+ VML
Sbjct: 337 HLAHHNDVML 366
Score = 42.3 bits (86), Expect(2) = 6e-021
Identities = 16/25 (64%), Positives = 20/25 (80%)
Frame = +2 / +1
Query: 41 VIELRQELIVNHNKTIDGRGAQVHI 115
VI QE+I+ +KTIDGRGAQVH+
Sbjct: 1 VINASQEIIIQSDKTIDGRGAQVHV 75
>gb|BJ247220.1|BJ247220 BJ247220 Y. Ogihara unpublished cDNA library, Wh_f Triticum
aestivum cDNA clone whf28c12 5', mRNA sequence
Length = 691
Score = 102 bits (218), Expect = 7e-021
Identities = 41/76 (53%), Positives = 51/76 (67%)
Frame = +2 / +1
Query: 632 KEVTKREYTPYKDYKEWVWKSQGDVMMNGAFFNESGGQNERKYDRFDFIPAKHGRYVGQL 811
KE TKREY ++K WVW S+GD+M+N A+F SGG+ +K + D I K G YV +L
Sbjct: 160 KEATKREYAAESEWKNWVWVSEGDLMVNDAYFTTSGGKIGQKLNGKDLIKPKQGEYVRRL 339
Query: 812 TRFAGPLKCIVGQPC* 859
TRFAGPL C G PC*
Sbjct: 340 TRFAGPLDCNQGSPC* 387
Database: Triticum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 3:01 PM
Number of letters in database: 367,240,239
Number of sequences in database: 636,343
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 820,510,060
Number of Sequences: 636343
Number of extensions: 12725787
Number of successful extensions: 138976
Number of sequences better than 1.0e-020: 30
length of database: 122,413,413
effective HSP length: 55
effective length of database: 87,414,548
effective search space used: 28759386292
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)