TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2437629.2.2
(1041 letters)
Database: Triticum_nucl_with_EST.fasta
636,343 sequences; 367,240,239 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CD868500.1|CD868500 AZO2.109B04R010328 AZO2 Triticum aes... 147 3e-049
gb|CD868499.1|CD868499 AZO2.109B04F001114 AZO2 Triticum aes... 147 5e-048
gb|CD907174.1|CD907174 G468.106C13F010810 G468 Triticum aes... 147 6e-048
gb|CN011621.1|CN011621 WHE3886_D10_H20ZS Wheat Fusarium gra... 147 6e-048
gb|BJ266775.1|BJ266775 BJ266775 Y. Ogihara unpublished cDNA... 147 7e-048
gb|BJ307537.1|BJ307537 BJ307537 Y. Ogihara unpublished cDNA... 129 1e-042
gb|CF133714.1|CF133714 WHE4362_D10_H20ZT Wheat meiotic flor... 140 2e-041
gb|CA719172.1|CA719172 wkm2n.pk003.b11 wkm2n Triticum aesti... 124 8e-033
gb|BJ221532.1|BJ221532 BJ221532 Y. Ogihara unpublished cDNA... 122 4e-032
gb|BJ214052.1|BJ214052 BJ214052 Y. Ogihara unpublished cDNA... 122 5e-032
gb|CA743035.1|CA743035 wri1s.pk002.e9 wri1s Triticum aestiv... 122 6e-032
gb|CD900181.1|CD900181 G174.114L13F010824 G174 Triticum aes... 122 7e-032
gb|BQ294965.1|BQ294965 WHE2856_F10_K20ZS Wheat unstressed r... 133 3e-030
gb|BJ258298.1|BJ258298 BJ258298 Y. Ogihara unpublished cDNA... 127 3e-028
gb|CV759008.1|CV759008 FGAS053390 Triticum aestivum FGAS: L... 124 2e-027
gb|CV764611.1|CV764611 FGAS058996 Triticum aestivum FGAS: L... 119 5e-026
gb|BJ276695.1|BJ276695 BJ276695 Y. Ogihara unpublished cDNA... 65 4e-022
gb|CV779982.1|CV779982 FGAS074391 Triticum aestivum FGAS: L... 102 6e-021
gb|CA610303.1|CA610303 wr1.pk0117.g11 wr1 Triticum aestivum... 99 7e-021
>gb|CD868500.1|CD868500 AZO2.109B04R010328 AZO2 Triticum aestivum cDNA clone AZO2109B04,
mRNA sequence
Length = 708
Score = 147 bits (315), Expect(3) = 3e-049
Identities = 60/69 (86%), Positives = 64/69 (92%)
Frame = +1 / -2
Query: 4 AIIRHPRIGEYAFGFITSTVVLQTDKGDEELCSVYVPTNHLYIGDIFLVNSXXXXRPNLS 183
AIIRHPR+GEYAFGFITSTVVLQTDKGDEELCSVYVPTNHLYIGDIFL+NS RPNLS
Sbjct: 653 AIIRHPRVGEYAFGFITSTVVLQTDKGDEELCSVYVPTNHLYIGDIFLLNSEEIIRPNLS 474
Query: 184 IREGIGMVV 210
IREGI ++V
Sbjct: 473 IREGIEIIV 447
Score = 120 bits (256), Expect(2) = 3e-041
Identities = 53/70 (75%), Positives = 59/70 (84%)
Frame = -2 / +1
Query: 212 QTTIPIPSRIDKLGLXXXXEFTRNISPMYR*FVGTYTLHSSSSPLSV*RTTVDVMNPNAY 33
+T I IPSR+DK GL EF+RNISP+YR*FVGT TLH+SSSPLSV*RTTVDV+NP AY
Sbjct: 445 ETIISIPSRMDKFGLMISSEFSRNISPIYR*FVGT*TLHNSSSPLSV*RTTVDVINPKAY 624
Query: 32 SPIRG*RIIA 3
SP RG RIIA
Sbjct: 625 SPTRGCRIIA 654
Score = 92.7 bits (196), Expect(2) = 4e-024
Identities = 37/69 (53%), Positives = 51/69 (73%)
Frame = -1 / +3
Query: 210 NYHTDSFSNR*IRSXXXXXVHQKYITDVQMICWHIHTTQFFVAFVSLKDHR*CYESKCIF 31
N + +SFSN *+ S V Q+YIT++ MIC HI+TTQF + FV LKD+ *CY+S+ +F
Sbjct: 447 NDNFNSFSNG*VWSDDLFRVQQEYITNI*MICRHINTTQFLITFVCLKDNS*CYKSEGVF 626
Query: 30 TNSWMTNYC 4
T++WM NYC
Sbjct: 627 TDTWMPNYC 653
Score = 72.5 bits (152), Expect(2) = 3e-041
Identities = 30/39 (76%), Positives = 33/39 (84%)
Frame = -3 / +1
Query: 499 HHVILFRRMFWLFRGMGSSDAIT*GMVIPPETIISAETK 383
H +ILFRRM WLF GMGSSDAIT GMVIPPETIIS ++
Sbjct: 355 HVIILFRRMLWLFLGMGSSDAITCGMVIPPETIISIPSR 471
Score = 68.0 bits (142), Expect(3) = 3e-049
Identities = 28/32 (87%), Positives = 32/32 (100%)
Frame = +3 / -2
Query: 396 EIIVSGGMTMPQVIASLEPMPRKSQNIRLNRM 491
EIIVSGGMTMPQVIASL+P+PRKSQ+IRLNR+
Sbjct: 458 EIIVSGGMTMPQVIASLDPIPRKSQSIRLNRI 363
Score = 42.8 bits (87), Expect(2) = 4e-024
Identities = 17/32 (53%), Positives = 22/32 (68%)
Frame = -2 / +3
Query: 491 HSI*TNVLAFPWHGLQ*CNHLRHGHPS*NNYF 396
+SI* + LA PW G+ CN+L HGH S N+ F
Sbjct: 363 YSI*ADALALPWDGI*RCNYLWHGHSSRNDNF 458
Score = 24.4 bits (47), Expect(3) = 3e-049
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = +2 / -2
Query: 683 EASC*CPGILFPHKLCYSL 739
E S CPGIL C+SL
Sbjct: 221 EVSYRCPGILLCDTCCFSL 165
>gb|CD868499.1|CD868499 AZO2.109B04F001114 AZO2 Triticum aestivum cDNA clone AZO2109B04,
mRNA sequence
Length = 570
Score = 147 bits (315), Expect(2) = 5e-048
Identities = 60/69 (86%), Positives = 64/69 (92%)
Frame = +1 / +2
Query: 4 AIIRHPRIGEYAFGFITSTVVLQTDKGDEELCSVYVPTNHLYIGDIFLVNSXXXXRPNLS 183
AIIRHPR+GEYAFGFITSTVVLQTDKGDEELCSVYVPTNHLYIGDIFL+NS RPNLS
Sbjct: 161 AIIRHPRVGEYAFGFITSTVVLQTDKGDEELCSVYVPTNHLYIGDIFLLNSEEIIRPNLS 340
Query: 184 IREGIGMVV 210
IREGI ++V
Sbjct: 341 IREGIEIIV 367
Score = 120 bits (256), Expect(2) = 3e-041
Identities = 53/70 (75%), Positives = 59/70 (84%)
Frame = -2 / -1
Query: 212 QTTIPIPSRIDKLGLXXXXEFTRNISPMYR*FVGTYTLHSSSSPLSV*RTTVDVMNPNAY 33
+T I IPSR+DK GL EF+RNISP+YR*FVGT TLH+SSSPLSV*RTTVDV+NP AY
Sbjct: 369 ETIISIPSRMDKFGLMISSEFSRNISPIYR*FVGT*TLHNSSSPLSV*RTTVDVINPKAY 190
Query: 32 SPIRG*RIIA 3
SP RG RIIA
Sbjct: 189 SPTRGCRIIA 160
Score = 92.7 bits (196), Expect(2) = 3e-024
Identities = 37/69 (53%), Positives = 51/69 (73%)
Frame = -1 / -3
Query: 210 NYHTDSFSNR*IRSXXXXXVHQKYITDVQMICWHIHTTQFFVAFVSLKDHR*CYESKCIF 31
N + +SFSN *+ S V Q+YIT++ MIC HI+TTQF + FV LKD+ *CY+S+ +F
Sbjct: 367 NDNFNSFSNG*VWSDDLFRVQQEYITNI*MICRHINTTQFLITFVCLKDNS*CYKSEGVF 188
Query: 30 TNSWMTNYC 4
T++WM NYC
Sbjct: 187 TDTWMPNYC 161
Score = 72.5 bits (152), Expect(2) = 3e-041
Identities = 30/39 (76%), Positives = 33/39 (84%)
Frame = -3 / -1
Query: 499 HHVILFRRMFWLFRGMGSSDAIT*GMVIPPETIISAETK 383
H +ILFRRM WLF GMGSSDAIT GMVIPPETIIS ++
Sbjct: 459 HVIILFRRMLWLFLGMGSSDAITCGMVIPPETIISIPSR 343
Score = 68.0 bits (142), Expect(2) = 5e-048
Identities = 28/32 (87%), Positives = 32/32 (100%)
Frame = +3 / +2
Query: 396 EIIVSGGMTMPQVIASLEPMPRKSQNIRLNRM 491
EIIVSGGMTMPQVIASL+P+PRKSQ+IRLNR+
Sbjct: 356 EIIVSGGMTMPQVIASLDPIPRKSQSIRLNRI 451
Score = 42.8 bits (87), Expect(2) = 3e-024
Identities = 17/32 (53%), Positives = 22/32 (68%)
Frame = -2 / -3
Query: 491 HSI*TNVLAFPWHGLQ*CNHLRHGHPS*NNYF 396
+SI* + LA PW G+ CN+L HGH S N+ F
Sbjct: 451 YSI*ADALALPWDGI*RCNYLWHGHSSRNDNF 356
>gb|CD907174.1|CD907174 G468.106C13F010810 G468 Triticum aestivum cDNA clone G468106C13,
mRNA sequence
Length = 628
Score = 147 bits (315), Expect(2) = 6e-048
Identities = 60/69 (86%), Positives = 64/69 (92%)
Frame = +1 / +1
Query: 4 AIIRHPRIGEYAFGFITSTVVLQTDKGDEELCSVYVPTNHLYIGDIFLVNSXXXXRPNLS 183
AIIRHPR+GEYAFGFITSTVVLQTDKGDEELCSVYVPTNHLYIGDIFL+NS RPNLS
Sbjct: 100 AIIRHPRVGEYAFGFITSTVVLQTDKGDEELCSVYVPTNHLYIGDIFLLNSEEIIRPNLS 279
Query: 184 IREGIGMVV 210
IREGI ++V
Sbjct: 280 IREGIEIIV 306
Score = 120 bits (256), Expect(2) = 3e-041
Identities = 53/70 (75%), Positives = 59/70 (84%)
Frame = -2 / -3
Query: 212 QTTIPIPSRIDKLGLXXXXEFTRNISPMYR*FVGTYTLHSSSSPLSV*RTTVDVMNPNAY 33
+T I IPSR+DK GL EF+RNISP+YR*FVGT TLH+SSSPLSV*RTTVDV+NP AY
Sbjct: 308 ETIISIPSRMDKFGLMISSEFSRNISPIYR*FVGT*TLHNSSSPLSV*RTTVDVINPKAY 129
Query: 32 SPIRG*RIIA 3
SP RG RIIA
Sbjct: 128 SPTRGCRIIA 99
Score = 92.7 bits (196), Expect(2) = 3e-024
Identities = 37/69 (53%), Positives = 51/69 (73%)
Frame = -1 / -2
Query: 210 NYHTDSFSNR*IRSXXXXXVHQKYITDVQMICWHIHTTQFFVAFVSLKDHR*CYESKCIF 31
N + +SFSN *+ S V Q+YIT++ MIC HI+TTQF + FV LKD+ *CY+S+ +F
Sbjct: 306 NDNFNSFSNG*VWSDDLFRVQQEYITNI*MICRHINTTQFLITFVCLKDNS*CYKSEGVF 127
Query: 30 TNSWMTNYC 4
T++WM NYC
Sbjct: 126 TDTWMPNYC 100
Score = 72.5 bits (152), Expect(2) = 3e-041
Identities = 30/39 (76%), Positives = 33/39 (84%)
Frame = -3 / -3
Query: 499 HHVILFRRMFWLFRGMGSSDAIT*GMVIPPETIISAETK 383
H +ILFRRM WLF GMGSSDAIT GMVIPPETIIS ++
Sbjct: 398 HVIILFRRMLWLFLGMGSSDAITCGMVIPPETIISIPSR 282
Score = 68.0 bits (142), Expect(2) = 6e-048
Identities = 28/32 (87%), Positives = 32/32 (100%)
Frame = +3 / +1
Query: 396 EIIVSGGMTMPQVIASLEPMPRKSQNIRLNRM 491
EIIVSGGMTMPQVIASL+P+PRKSQ+IRLNR+
Sbjct: 295 EIIVSGGMTMPQVIASLDPIPRKSQSIRLNRI 390
Score = 42.8 bits (87), Expect(2) = 3e-024
Identities = 17/32 (53%), Positives = 22/32 (68%)
Frame = -2 / -2
Query: 491 HSI*TNVLAFPWHGLQ*CNHLRHGHPS*NNYF 396
+SI* + LA PW G+ CN+L HGH S N+ F
Sbjct: 390 YSI*ADALALPWDGI*RCNYLWHGHSSRNDNF 295
>gb|CN011621.1|CN011621 WHE3886_D10_H20ZS Wheat Fusarium graminearum infected spike cDNA
library Triticum aestivum cDNA clone WHE3886_D10_H20,
mRNA sequence
Length = 632
Score = 147 bits (315), Expect(2) = 6e-048
Identities = 60/69 (86%), Positives = 64/69 (92%)
Frame = +1 / +3
Query: 4 AIIRHPRIGEYAFGFITSTVVLQTDKGDEELCSVYVPTNHLYIGDIFLVNSXXXXRPNLS 183
AIIRHPR+GEYAFGFITSTVVLQTDKGDEELCSVYVPTNHLYIGDIFL+NS RPNLS
Sbjct: 246 AIIRHPRVGEYAFGFITSTVVLQTDKGDEELCSVYVPTNHLYIGDIFLLNSEEIIRPNLS 425
Query: 184 IREGIGMVV 210
IREGI ++V
Sbjct: 426 IREGIEIIV 452
Score = 120 bits (256), Expect(2) = 3e-041
Identities = 53/70 (75%), Positives = 59/70 (84%)
Frame = -2 / -2
Query: 212 QTTIPIPSRIDKLGLXXXXEFTRNISPMYR*FVGTYTLHSSSSPLSV*RTTVDVMNPNAY 33
+T I IPSR+DK GL EF+RNISP+YR*FVGT TLH+SSSPLSV*RTTVDV+NP AY
Sbjct: 454 ETIISIPSRMDKFGLMISSEFSRNISPIYR*FVGT*TLHNSSSPLSV*RTTVDVINPKAY 275
Query: 32 SPIRG*RIIA 3
SP RG RIIA
Sbjct: 274 SPTRGCRIIA 245
Score = 92.7 bits (196), Expect(2) = 3e-024
Identities = 37/69 (53%), Positives = 51/69 (73%)
Frame = -1 / -1
Query: 210 NYHTDSFSNR*IRSXXXXXVHQKYITDVQMICWHIHTTQFFVAFVSLKDHR*CYESKCIF 31
N + +SFSN *+ S V Q+YIT++ MIC HI+TTQF + FV LKD+ *CY+S+ +F
Sbjct: 452 NDNFNSFSNG*VWSDDLFRVQQEYITNI*MICRHINTTQFLITFVCLKDNS*CYKSEGVF 273
Query: 30 TNSWMTNYC 4
T++WM NYC
Sbjct: 272 TDTWMPNYC 246
Score = 72.5 bits (152), Expect(2) = 3e-041
Identities = 30/39 (76%), Positives = 33/39 (84%)
Frame = -3 / -2
Query: 499 HHVILFRRMFWLFRGMGSSDAIT*GMVIPPETIISAETK 383
H +ILFRRM WLF GMGSSDAIT GMVIPPETIIS ++
Sbjct: 544 HVIILFRRMLWLFLGMGSSDAITCGMVIPPETIISIPSR 428
Score = 68.0 bits (142), Expect(2) = 6e-048
Identities = 28/32 (87%), Positives = 32/32 (100%)
Frame = +3 / +3
Query: 396 EIIVSGGMTMPQVIASLEPMPRKSQNIRLNRM 491
EIIVSGGMTMPQVIASL+P+PRKSQ+IRLNR+
Sbjct: 441 EIIVSGGMTMPQVIASLDPIPRKSQSIRLNRI 536
Score = 42.8 bits (87), Expect(2) = 3e-024
Identities = 17/32 (53%), Positives = 22/32 (68%)
Frame = -2 / -1
Query: 491 HSI*TNVLAFPWHGLQ*CNHLRHGHPS*NNYF 396
+SI* + LA PW G+ CN+L HGH S N+ F
Sbjct: 536 YSI*ADALALPWDGI*RCNYLWHGHSSRNDNF 441
>gb|BJ266775.1|BJ266775 BJ266775 Y. Ogihara unpublished cDNA library, Wh_h Triticum
aestivum cDNA clone whh6o11 3', mRNA sequence
Length = 734
Score = 147 bits (315), Expect(2) = 7e-048
Identities = 60/69 (86%), Positives = 64/69 (92%)
Frame = +1 / -3
Query: 4 AIIRHPRIGEYAFGFITSTVVLQTDKGDEELCSVYVPTNHLYIGDIFLVNSXXXXRPNLS 183
AIIRHPR+GEYAFGFITSTVVLQTDKGDEELCSVYVPTNHLYIGDIFL+NS RPNLS
Sbjct: 651 AIIRHPRVGEYAFGFITSTVVLQTDKGDEELCSVYVPTNHLYIGDIFLLNSEEIIRPNLS 472
Query: 184 IREGIGMVV 210
IREGI ++V
Sbjct: 471 IREGIEIIV 445
Score = 122 bits (262), Expect(3) = 9e-044
Identities = 54/70 (77%), Positives = 60/70 (85%)
Frame = -2 / +2
Query: 212 QTTIPIPSRIDKLGLXXXXEFTRNISPMYR*FVGTYTLHSSSSPLSV*RTTVDVMNPNAY 33
+T I IPSR+DK GL EF+RNISP+YR*FVGT TLH+SSSPLSV*RTTVDV+NPNAY
Sbjct: 443 ETIISIPSRMDKFGLMISSEFSRNISPIYR*FVGT*TLHNSSSPLSV*RTTVDVINPNAY 622
Query: 32 SPIRG*RIIA 3
SP RG RIIA
Sbjct: 623 SPTRGCRIIA 652
Score = 108 bits (231), Expect(2) = 9e-028
Identities = 41/69 (59%), Positives = 53/69 (76%)
Frame = -1 / +1
Query: 210 NYHTDSFSNR*IRSXXXXXVHQKYITDVQMICWHIHTTQFFVAFVSLKDHR*CYESKCIF 31
N + +SFSN *+ S V QKYIT++ MICWHI+TTQF + FV LKD+ *CY+S+C+F
Sbjct: 445 NDNFNSFSNG*VWSDDLFRVQQKYITNI*MICWHINTTQFLITFVCLKDNS*CYKSECVF 624
Query: 30 TNSWMTNYC 4
TN+WM NYC
Sbjct: 625 TNTWMPNYC 651
Score = 72.5 bits (152), Expect(3) = 9e-044
Identities = 30/39 (76%), Positives = 33/39 (84%)
Frame = -3 / +2
Query: 499 HHVILFRRMFWLFRGMGSSDAIT*GMVIPPETIISAETK 383
H +ILFRRM WLF GMGSSDAIT GMVIPPETIIS ++
Sbjct: 353 HVIILFRRMLWLFLGMGSSDAITCGMVIPPETIISIPSR 469
Score = 68.0 bits (142), Expect(2) = 7e-048
Identities = 28/32 (87%), Positives = 32/32 (100%)
Frame = +3 / -3
Query: 396 EIIVSGGMTMPQVIASLEPMPRKSQNIRLNRM 491
EIIVSGGMTMPQVIASL+P+PRKSQ+IRLNR+
Sbjct: 456 EIIVSGGMTMPQVIASLDPIPRKSQSIRLNRI 361
Score = 39.1 bits (79), Expect(2) = 9e-028
Identities = 16/32 (50%), Positives = 21/32 (65%)
Frame = -2 / +1
Query: 491 HSI*TNVLAFPWHGLQ*CNHLRHGHPS*NNYF 396
+SI* + LA W G+ CN+L HGH S N+ F
Sbjct: 361 YSI*ADALALSWDGI*RCNYLWHGHSSRNDNF 456
Score = 25.8 bits (50), Expect(3) = 9e-044
Identities = 9/14 (64%), Positives = 12/14 (85%)
Frame = -1 / +2
Query: 714 NNIPGHQHDASPAL 673
N+IPGH++DAS L
Sbjct: 188 NSIPGHRYDASVQL 229
>gb|BJ307537.1|BJ307537 BJ307537 Y. Ogihara unpublished cDNA library, Wh_yd Triticum
aestivum cDNA clone whyd11n24 3', mRNA sequence
Length = 708
Score = 129 bits (277), Expect(2) = 1e-042
Identities = 53/62 (85%), Positives = 57/62 (91%)
Frame = +1 / -3
Query: 25 IGEYAFGFITSTVVLQTDKGDEELCSVYVPTNHLYIGDIFLVNSXXXXRPNLSIREGIGM 204
+GEYAFGFITSTVVLQTDKGDEELCSVYVPTNHLYIGDIFL+NS RPNLSIREGI +
Sbjct: 694 LGEYAFGFITSTVVLQTDKGDEELCSVYVPTNHLYIGDIFLLNSEEIIRPNLSIREGIEI 515
Query: 205 VV 210
+V
Sbjct: 514 IV 509
Score = 112 bits (239), Expect(3) = 1e-040
Identities = 48/62 (77%), Positives = 54/62 (87%)
Frame = -2 / +3
Query: 212 QTTIPIPSRIDKLGLXXXXEFTRNISPMYR*FVGTYTLHSSSSPLSV*RTTVDVMNPNAY 33
+T I IPSR+DK GL EF+RNISP+YR*FVGT TLH+SSSPLSV*RTTVDV+NPNAY
Sbjct: 507 ETIISIPSRMDKFGLMISSEFSRNISPIYR*FVGT*TLHNSSSPLSV*RTTVDVINPNAY 686
Query: 32 SP 27
SP
Sbjct: 687 SP 692
Score = 88.6 bits (187), Expect(2) = 8e-022
Identities = 35/61 (57%), Positives = 46/61 (75%)
Frame = -1 / +2
Query: 210 NYHTDSFSNR*IRSXXXXXVHQKYITDVQMICWHIHTTQFFVAFVSLKDHR*CYESKCIF 31
N + +SFSN *+ S V QKYIT++ MICWHI+TTQF + FV LKD+ *CY+S+C+F
Sbjct: 509 NDNFNSFSNG*VWSDDLFRVQQKYITNI*MICWHINTTQFLITFVCLKDNS*CYKSECVF 688
Query: 30 T 28
T
Sbjct: 689 T 691
Score = 72.5 bits (152), Expect(3) = 1e-040
Identities = 30/39 (76%), Positives = 33/39 (84%)
Frame = -3 / +3
Query: 499 HHVILFRRMFWLFRGMGSSDAIT*GMVIPPETIISAETK 383
H +ILFRRM WLF GMGSSDAIT GMVIPPETIIS ++
Sbjct: 417 HVIILFRRMLWLFLGMGSSDAITCGMVIPPETIISIPSR 533
Score = 68.0 bits (142), Expect(2) = 1e-042
Identities = 28/32 (87%), Positives = 32/32 (100%)
Frame = +3 / -3
Query: 396 EIIVSGGMTMPQVIASLEPMPRKSQNIRLNRM 491
EIIVSGGMTMPQVIASL+P+PRKSQ+IRLNR+
Sbjct: 520 EIIVSGGMTMPQVIASLDPIPRKSQSIRLNRI 425
Score = 39.1 bits (79), Expect(2) = 8e-022
Identities = 16/32 (50%), Positives = 21/32 (65%)
Frame = -2 / +2
Query: 491 HSI*TNVLAFPWHGLQ*CNHLRHGHPS*NNYF 396
+SI* + LA W G+ CN+L HGH S N+ F
Sbjct: 425 YSI*ADALALSWDGI*RCNYLWHGHSSRNDNF 520
Score = 25.8 bits (50), Expect(3) = 1e-040
Identities = 9/14 (64%), Positives = 12/14 (85%)
Frame = -1 / +3
Query: 714 NNIPGHQHDASPAL 673
N+IPGH++DAS L
Sbjct: 252 NSIPGHRYDASVQL 293
>gb|CF133714.1|CF133714 WHE4362_D10_H20ZT Wheat meiotic floret cDNA library Triticum
aestivum cDNA clone WHE4362_D10_H20, mRNA sequence
Length = 761
Score = 140 bits (301), Expect(2) = 2e-041
Identities = 57/69 (82%), Positives = 62/69 (89%)
Frame = +1 / +3
Query: 4 AIIRHPRIGEYAFGFITSTVVLQTDKGDEELCSVYVPTNHLYIGDIFLVNSXXXXRPNLS 183
AII HPR GEYAFGFITS+++LQTDKGDEELCSVYVPTNHLYIGDIFLVNS RPNLS
Sbjct: 315 AIISHPRAGEYAFGFITSSMILQTDKGDEELCSVYVPTNHLYIGDIFLVNSAEIIRPNLS 494
Query: 184 IREGIGMVV 210
IREGI ++V
Sbjct: 495 IREGIEIIV 521
Score = 111 bits (237), Expect(2) = 3e-029
Identities = 50/70 (71%), Positives = 56/70 (80%)
Frame = -2 / -2
Query: 212 QTTIPIPSRIDKLGLXXXXEFTRNISPMYR*FVGTYTLHSSSSPLSV*RTTVDVMNPNAY 33
+T I IPSR+D+LGL EFT+ ISP+YR* VGT TLHSSSSPLSV*R +DVMNPNAY
Sbjct: 523 ETIISIPSRMDRLGLIISAEFTKKISPIYR*LVGT*TLHSSSSPLSV*RIMLDVMNPNAY 344
Query: 32 SPIRG*RIIA 3
SP RG IIA
Sbjct: 343 SPARGWLIIA 314
Score = 91.8 bits (194), Expect(2) = 6e-022
Identities = 37/63 (58%), Positives = 44/63 (69%)
Frame = -1 / -1
Query: 192 FSNR*IRSXXXXXVHQKYITDVQMICWHIHTTQFFVAFVSLKDHR*CYESKCIFTNSWMT 13
FSN I VHQK IT++ MI WHI TTQFF+ FVSLK+H CYE KC+FT++ M
Sbjct: 503 FSNGQIGPYNFRRVHQKDITNI*MIGWHIDTTQFFITFVSLKNHARCYEPKCVFTSTGMA 324
Query: 12 NYC 4
NYC
Sbjct: 323 NYC 315
Score = 52.8 bits (109), Expect(2) = 2e-041
Identities = 22/32 (68%), Positives = 26/32 (81%)
Frame = +3 / +3
Query: 396 EIIVSGGMTMPQVIASLEPMPRKSQNIRLNRM 491
EIIVSGGMTMPQVI +L P P K++ RL+RM
Sbjct: 510 EIIVSGGMTMPQVITALGPAPDKNEGTRLSRM 605
Score = 41.4 bits (84), Expect(2) = 3e-029
Identities = 19/37 (51%), Positives = 24/37 (64%)
Frame = -3 / -2
Query: 493 VILFRRMFWLFRGMGSSDAIT*GMVIPPETIISAETK 383
+IL +R+ G G S IT GMVIPPETIIS ++
Sbjct: 607 IILLKRVPSFLSGAGPSAVITCGMVIPPETIISIPSR 497
Score = 36.3 bits (73), Expect(2) = 6e-022
Identities = 12/15 (80%), Positives = 13/15 (86%)
Frame = -2 / -1
Query: 440 CNHLRHGHPS*NNYF 396
CNHLRHGH S +NYF
Sbjct: 554 CNHLRHGHSSRDNYF 510
>gb|CA719172.1|CA719172 wkm2n.pk003.b11 wkm2n Triticum aestivum cDNA clone wkm2n.pk003.b11
5' end, mRNA sequence
Length = 593
Score = 124 bits (266), Expect(2) = 8e-033
Identities = 52/70 (74%), Positives = 58/70 (82%)
Frame = +1 / +1
Query: 1 GAIIRHPRIGEYAFGFITSTVVLQTDKGDEELCSVYVPTNHLYIGDIFLVNSXXXXRPNL 180
G IIRHPRIGEYAFGFITS+V LQ+ G E+L VYVPTNHLYIGDIF+VNS RPNL
Sbjct: 109 GVIIRHPRIGEYAFGFITSSVSLQSYSGQEDLYCVYVPTNHLYIGDIFMVNSKDVIRPNL 288
Query: 181 SIREGIGMVV 210
S+REGI +VV
Sbjct: 289 SVREGIEIVV 318
Score = 39.6 bits (80), Expect(2) = 8e-033
Identities = 13/21 (61%), Positives = 20/21 (95%)
Frame = +3 / +1
Query: 396 EIIVSGGMTMPQVIASLEPMP 458
EI+VSGGM+MPQ++++L+P P
Sbjct: 307 EIVVSGGMSMPQILSTLDPHP 369
>gb|BJ221532.1|BJ221532 BJ221532 Y. Ogihara unpublished cDNA library, Wh Triticum aestivum
cDNA clone wh25j18 3', mRNA sequence
Length = 603
Score = 122 bits (260), Expect(2) = 4e-032
Identities = 51/68 (75%), Positives = 57/68 (83%)
Frame = +1 / -2
Query: 7 IIRHPRIGEYAFGFITSTVVLQTDKGDEELCSVYVPTNHLYIGDIFLVNSXXXXRPNLSI 186
IIRHPRIGEYAFGFITS+V LQ+ G E+L VYVPTNHLYIGDIF+VNS RPNLS+
Sbjct: 491 IIRHPRIGEYAFGFITSSVSLQSYSGQEDLYCVYVPTNHLYIGDIFMVNSKDVIRPNLSV 312
Query: 187 REGIGMVV 210
REGI +VV
Sbjct: 311 REGIEIVV 288
Score = 40.0 bits (81), Expect(2) = 4e-032
Identities = 14/21 (66%), Positives = 20/21 (95%)
Frame = +3 / -2
Query: 396 EIIVSGGMTMPQVIASLEPMP 458
EI+VSGGM+MPQV+++L+P P
Sbjct: 299 EIVVSGGMSMPQVLSTLDPHP 237
>gb|BJ214052.1|BJ214052 BJ214052 Y. Ogihara unpublished cDNA library, Wh Triticum aestivum
cDNA clone wh25j18 5', mRNA sequence
Length = 693
Score = 122 bits (260), Expect(2) = 5e-032
Identities = 51/68 (75%), Positives = 57/68 (83%)
Frame = +1 / +1
Query: 7 IIRHPRIGEYAFGFITSTVVLQTDKGDEELCSVYVPTNHLYIGDIFLVNSXXXXRPNLSI 186
IIRHPRIGEYAFGFITS+V LQ+ G E+L VYVPTNHLYIGDIF+VNS RPNLS+
Sbjct: 337 IIRHPRIGEYAFGFITSSVSLQSYSGQEDLYCVYVPTNHLYIGDIFMVNSKDVIRPNLSV 516
Query: 187 REGIGMVV 210
REGI +VV
Sbjct: 517 REGIEIVV 540
Score = 40.0 bits (81), Expect(2) = 5e-032
Identities = 14/21 (66%), Positives = 20/21 (95%)
Frame = +3 / +1
Query: 396 EIIVSGGMTMPQVIASLEPMP 458
EI+VSGGM+MPQV+++L+P P
Sbjct: 529 EIVVSGGMSMPQVLSTLDPHP 591
>gb|CA743035.1|CA743035 wri1s.pk002.e9 wri1s Triticum aestivum cDNA clone wri1s.pk002.e9 5'
end, mRNA sequence
Length = 631
Score = 122 bits (260), Expect(2) = 6e-032
Identities = 51/68 (75%), Positives = 57/68 (83%)
Frame = +1 / +3
Query: 7 IIRHPRIGEYAFGFITSTVVLQTDKGDEELCSVYVPTNHLYIGDIFLVNSXXXXRPNLSI 186
IIRHPRIGEYAFGFITS+V LQ+ G E+L VYVPTNHLYIGDIF+VNS RPNLS+
Sbjct: 150 IIRHPRIGEYAFGFITSSVSLQSYSGQEDLYCVYVPTNHLYIGDIFMVNSKDVIRPNLSV 329
Query: 187 REGIGMVV 210
REGI +VV
Sbjct: 330 REGIEIVV 353
Score = 39.6 bits (80), Expect(2) = 6e-032
Identities = 13/21 (61%), Positives = 20/21 (95%)
Frame = +3 / +3
Query: 396 EIIVSGGMTMPQVIASLEPMP 458
EI+VSGGM+MPQ++++L+P P
Sbjct: 342 EIVVSGGMSMPQILSTLDPHP 404
>gb|CD900181.1|CD900181 G174.114L13F010824 G174 Triticum aestivum cDNA clone G174114L13,
mRNA sequence
Length = 703
Score = 122 bits (260), Expect(2) = 7e-032
Identities = 51/68 (75%), Positives = 57/68 (83%)
Frame = +1 / +3
Query: 7 IIRHPRIGEYAFGFITSTVVLQTDKGDEELCSVYVPTNHLYIGDIFLVNSXXXXRPNLSI 186
IIRHPRIGEYAFGFITS+V LQ+ G E+L VYVPTNHLYIGDIF+VNS RPNLS+
Sbjct: 144 IIRHPRIGEYAFGFITSSVSLQSYSGQEDLYCVYVPTNHLYIGDIFMVNSKDVIRPNLSV 323
Query: 187 REGIGMVV 210
REGI +VV
Sbjct: 324 REGIEIVV 347
Score = 39.6 bits (80), Expect(2) = 7e-032
Identities = 13/21 (61%), Positives = 20/21 (95%)
Frame = +3 / +3
Query: 396 EIIVSGGMTMPQVIASLEPMP 458
EI+VSGGM+MPQ++++L+P P
Sbjct: 336 EIVVSGGMSMPQILSTLDPHP 398
>gb|BQ294965.1|BQ294965 WHE2856_F10_K20ZS Wheat unstressed root tip cDNA library Triticum
aestivum cDNA clone WHE2856_F10_K20, mRNA sequence
Length = 691
Score = 133 bits (285), Expect = 3e-030
Identities = 54/60 (90%), Positives = 56/60 (93%)
Frame = +1 / +1
Query: 4 AIIRHPRIGEYAFGFITSTVVLQTDKGDEELCSVYVPTNHLYIGDIFLVNSXXXXRPNLS 183
AIIRHPR+GEYAFGFITSTVVLQTDKGDEELCSVYVPTNHLYIGDIFL+NS RPNLS
Sbjct: 511 AIIRHPRVGEYAFGFITSTVVLQTDKGDEELCSVYVPTNHLYIGDIFLLNSEEIIRPNLS 690
Score = 106 bits (226), Expect = 5e-022
Identities = 47/60 (78%), Positives = 51/60 (85%)
Frame = -2 / -3
Query: 182 DKLGLXXXXEFTRNISPMYR*FVGTYTLHSSSSPLSV*RTTVDVMNPNAYSPIRG*RIIA 3
DK GL EF+RNISP+YR*FVGT TLH+SSSPLSV*RTTVDV+NP AYSP RG RIIA
Sbjct: 689 DKFGLMISSEFSRNISPIYR*FVGT*TLHNSSSPLSV*RTTVDVINPKAYSPTRGCRIIA 510
>gb|BJ258298.1|BJ258298 BJ258298 Y. Ogihara unpublished cDNA library, Wh_h Triticum
aestivum cDNA clone whh6o11 5', mRNA sequence
Length = 648
Score = 127 bits (271), Expect = 3e-028
Identities = 51/57 (89%), Positives = 53/57 (92%)
Frame = +1 / +1
Query: 4 AIIRHPRIGEYAFGFITSTVVLQTDKGDEELCSVYVPTNHLYIGDIFLVNSXXXXRP 174
AIIRHPR+GEYAFGFITSTVVLQTDKGDEELCSVYVPTNHLYIGDIFL+NS RP
Sbjct: 478 AIIRHPRVGEYAFGFITSTVVLQTDKGDEELCSVYVPTNHLYIGDIFLLNSEEIIRP 648
Score = 104 bits (221), Expect = 2e-021
Identities = 46/57 (80%), Positives = 50/57 (87%)
Frame = -2 / -2
Query: 173 GLXXXXEFTRNISPMYR*FVGTYTLHSSSSPLSV*RTTVDVMNPNAYSPIRG*RIIA 3
GL EF+RNISP+YR*FVGT TLH+SSSPLSV*RTTVDV+NPNAYSP RG RIIA
Sbjct: 647 GLMISSEFSRNISPIYR*FVGT*TLHNSSSPLSV*RTTVDVINPNAYSPTRGCRIIA 477
>gb|CV759008.1|CV759008 FGAS053390 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 855
Score = 124 bits (265), Expect = 2e-027
Identities = 50/59 (84%), Positives = 53/59 (89%)
Frame = +1 / +1
Query: 4 AIIRHPRIGEYAFGFITSTVVLQTDKGDEELCSVYVPTNHLYIGDIFLVNSXXXXRPNL 180
AIIRHPR+GEYAFGFITSTVVL T+KGDEELCSVYVPTNHLYIGDIFL+NS RP L
Sbjct: 643 AIIRHPRVGEYAFGFITSTVVLPTEKGDEELCSVYVPTNHLYIGDIFLLNSEEIFRPKL 819
>gb|CV764611.1|CV764611 FGAS058996 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 822
Score = 119 bits (255), Expect = 5e-026
Identities = 48/51 (94%), Positives = 50/51 (98%)
Frame = +1 / +1
Query: 4 AIIRHPRIGEYAFGFITSTVVLQTDKGDEELCSVYVPTNHLYIGDIFLVNS 156
AIIRHPR+GEYAFGFITSTVVLQTDKGDEELCSVYVPTNHLYIGDIFL +S
Sbjct: 655 AIIRHPRVGEYAFGFITSTVVLQTDKGDEELCSVYVPTNHLYIGDIFLPDS 807
>gb|BJ276695.1|BJ276695 BJ276695 Y. Ogihara unpublished cDNA library, Wh_oh Triticum
aestivum cDNA clone whoh1p20 3', mRNA sequence
Length = 586
Score = 65.2 bits (136), Expect(3) = 4e-022
Identities = 25/25 (100%), Positives = 25/25 (100%)
Frame = +1 / -2
Query: 79 KGDEELCSVYVPTNHLYIGDIFLVN 153
KGDEELCSVYVPTNHLYIGDIFLVN
Sbjct: 543 KGDEELCSVYVPTNHLYIGDIFLVN 469
Score = 52.8 bits (109), Expect(3) = 4e-022
Identities = 22/32 (68%), Positives = 26/32 (81%)
Frame = +3 / -3
Query: 396 EIIVSGGMTMPQVIASLEPMPRKSQNIRLNRM 491
EIIVSGGMTMPQVI +L P P K++ RL+RM
Sbjct: 422 EIIVSGGMTMPQVITALGPAPDKNEGTRLSRM 327
Score = 29.0 bits (57), Expect(3) = 4e-022
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = +1 / -3
Query: 154 SXXXXRPNLSIREGIGMVV 210
S RPNLSIREGI ++V
Sbjct: 467 SAEIIRPNLSIREGIEIIV 411
>gb|CV779982.1|CV779982 FGAS074391 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 841
Score = 102 bits (218), Expect = 6e-021
Identities = 40/47 (85%), Positives = 44/47 (93%)
Frame = +1 / +1
Query: 4 AIIRHPRIGEYAFGFITSTVVLQTDKGDEELCSVYVPTNHLYIGDIF 144
AII HPR GEYAFGFITS+++LQTDKGDEELCSVYV TNHLYIG+IF
Sbjct: 658 AIISHPRAGEYAFGFITSSMILQTDKGDEELCSVYVATNHLYIGEIF 798
>gb|CA610303.1|CA610303 wr1.pk0117.g11 wr1 Triticum aestivum cDNA clone wr1.pk0117.g11 5'
end, mRNA sequence
Length = 662
Score = 98.7 bits (209), Expect(2) = 7e-021
Identities = 41/50 (82%), Positives = 43/50 (86%)
Frame = +1 / +2
Query: 4 AIIRHPRIGEYAFGFITSTVVLQTDKGDEELCSVYVPTNHLYIGDIFLVN 153
AIIRHPR+GEYAFGFITSTVVLQTDKGDEELCSVYVPT +GD F N
Sbjct: 95 AIIRHPRVGEYAFGFITSTVVLQTDKGDEELCSVYVPTIIYILGDTFSWN 244
Score = 25.8 bits (50), Expect(2) = 7e-021
Identities = 11/17 (64%), Positives = 12/17 (70%)
Frame = +3 / +2
Query: 411 GGMTMPQVIASLEPMPR 461
G MTMP VIASL P+
Sbjct: 311 GXMTMPXVIASLVSXPQ 361
Database: Triticum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 3:01 PM
Number of letters in database: 367,240,239
Number of sequences in database: 636,343
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 934,738,524
Number of Sequences: 636343
Number of extensions: 13744986
Number of successful extensions: 142452
Number of sequences better than 1.0e-020: 29
length of database: 122,413,413
effective HSP length: 54
effective length of database: 88,050,891
effective search space used: 25710860172
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)