TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2430991.2.1
(515 letters)
Database: Triticum_nucl_with_EST.fasta
636,343 sequences; 367,240,239 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|DN829533.1|DN829533 KUCD01_11_E11_T3 WSWR cDNA library T... 334 5e-091
gb|CF133702.1|CF133702 WHE4362_C07_F14ZT Wheat meiotic flor... 169 2e-041
gb|BQ167675.1|BQ167675 WHE0084_C10_E20ZK Cheyenne wheat end... 129 1e-037
gb|CA498726.1|CA498726 WHE3246_H11_O22ZT Wheat meiotic anth... 134 5e-031
gb|CA499038.1|CA499038 WHE4002_F10_K20ZT Wheat meiotic anth... 134 5e-031
gb|BE489408.1|BE489408 WHE1071-1074_G03_G03ZS Wheat unstres... 123 2e-027
gb|BE488685.1|BE488685 WHE1053_F05_L09ZS Wheat unstressed s... 122 2e-027
gb|BE488842.1|BE488842 WHE1078_E09_J18ZS Wheat unstressed s... 122 2e-027
gb|BE489330.1|BE489330 WHE1076_B10_C20ZS Wheat unstressed s... 122 2e-027
gb|BF473437.1|BF473437 WHE0924_D08_H16ZS Wheat 5-15 DAP spi... 120 1e-026
gb|BQ241368.1|BQ241368 TaE05006A03R TaE05 Triticum aestivum... 120 1e-026
gb|BJ267673.1|BJ267673 BJ267673 Y. Ogihara unpublished cDNA... 85 8e-026
gb|BJ267672.1|BJ267672 BJ267672 Y. Ogihara unpublished cDNA... 85 8e-026
gb|BE489749.1|BE489749 WHE1071-1074_H18_H18ZS Wheat unstres... 102 8e-024
gb|DR740515.1|DR740515 FGAS000462 Triticum aestivum FGAS: L... 106 1e-022
gb|BE606954.1|BE606954 WHE0914_H07_O14ZS Wheat 5-15 DAP spi... 105 4e-022
>gb|DN829533.1|DN829533 KUCD01_11_E11_T3 WSWR cDNA library Triticum aestivum cDNA, mRNA
sequence
Length = 943
Score = 334 bits (723), Expect = 5e-091
Identities = 133/153 (86%), Positives = 144/153 (94%)
Frame = -2 / +2
Query: 460 IAAEELPKGLYCLGVRLTMXWFKSPELQRKFSDRSPAVQSNLRDNSLYHFCVFSDNILAV 281
IAAEELPKGLYCLGVRLTM WFKS ELQRKF DRSPAVQSNLRDNSLYH+CVFSDNI+AV
Sbjct: 59 IAAEELPKGLYCLGVRLTMEWFKSAELQRKFLDRSPAVQSNLRDNSLYHYCVFSDNIIAV 238
Query: 280 SVVVNSTAINSRHPDKVVFHLVTDELNYAPMKAWFGMNDYRGVTVEIQKVEDFTWLNASY 101
SVVVNST +NS+HP+K+VFHLVTDE+NY PM+AWF +NDYRG VEIQKVEDFTWLNASY
Sbjct: 239 SVVVNSTTLNSKHPEKIVFHLVTDEVNYDPMRAWFALNDYRGAIVEIQKVEDFTWLNASY 418
Query: 100 VPVLKQLQNAATQKFYFSGSGSRGTPIKFRNPK 2
VPVLKQLQ+AATQ FYFSGSG+RGTPIKFRNPK
Sbjct: 419 VPVLKQLQDAATQNFYFSGSGNRGTPIKFRNPK 517
Score = 254 bits (550), Expect = 4e-067
Identities = 108/151 (71%), Positives = 118/151 (78%)
Frame = -1 / +1
Query: 461 DCC*GAPKGTLLPWCPVNHGXVQESRASEEVFG*EPSSAEQSEG*QPLSFLCLLRQHPCC 282
DCC*GAPKG LLPWCPVNHG VQE RASEEV G*EPSSAEQSEG*QPLS LC L QH
Sbjct: 58 DCC*GAPKGALLPWCPVNHGMVQECRASEEVLG*EPSSAEQSEG*QPLSLLCFLGQHHRG 237
Query: 281 FSCC*FYGYKLEAP*QGCFSLSD**VELCSDEGMVWHE*LQRGHCGDTKGGGLYLAQCIV 102
C FY + +AP*+ CF D EL S+EG+V E*LQRGHCGDTKGGGL+LA+C V
Sbjct: 238 LCCGQFYNSEFKAP*KDCFPFGDRRGEL*SNEGVVCLE*LQRGHCGDTKGGGLHLAKCFV 417
Query: 101 CSRS*TATECCYTEVLLLWQW*SWNTN*IQE 9
CS S*TA CCYTE LLLW+W*SWNTN +Q+
Sbjct: 418 CSCS*TAPGCCYTEFLLLWKW*SWNTNQVQK 510
Score = 241 bits (520), Expect = 5e-063
Identities = 105/153 (68%), Positives = 123/153 (80%)
Frame = +2 / -1
Query: 2 LWVPEFNWCSTTTTAREVELLCSSIL*LFKNGNIRCIEPGKVLHLLYLHSDPSVVIHAKP 181
L + E +WCST TT+REVE+LCSSIL LFKN NIR I PG+VLHLLYLH+ PSV+I KP
Sbjct: 517 LGISELDWCSTITTSREVEILCSSILELFKNRNIRSI*PGEVLHLLYLHNGPSVIIQGKP 338
Query: 182 CLHRSIVQLISH*VKNNLVRVPRVYSRRINNN*NSKDVV*EDTKMIEAVIPQIALHCWAP 361
H IV L+ H ++NNL RV + S RI++N + DVV E+T +IEAVIPQIALHCWAP
Sbjct: 337 RPHWIIVHLVGHQMENNLFRVL*IQSCRIDHNRDRDDVVRENTIVIEAVIPQIALHCWAP 158
Query: 362 IRKLPLKLGTLEPXHG*PDTKAIKSLWELLSSN 460
I++LPLKLGTLEP HG*PDTKAIK LWELLSSN
Sbjct: 157 IQELPLKLGTLEPFHG*PDTKAIKPLWELLSSN 59
Score = 188 bits (406), Expect(2) = 2e-054
Identities = 86/106 (81%), Positives = 89/106 (83%)
Frame = +3 / -2
Query: 6 GFLNLIGVPRLPLPEK*NFCVAAFCSCLRTGTYDALSQVKSSTFCISTVTPL*SFMPNHA 185
GFLNLIGVPRLPLPEK* FCVAA SCLRTGTY+A SQVKSSTFCIST+ PL*SF NHA
Sbjct: 513 GFLNLIGVPRLPLPEK*KFCVAASWSCLRTGTYEAFSQVKSSTFCISTMAPL*SFKANHA 334
Query: 186 FIGA*FNSSVTK*KTTLSGCLEFIAVELTTTETARMLSEKTQK**R 323
IG+*F SSVTK KT SGC EF VELTTTETA MLSEKTQ **R
Sbjct: 333 LIGS*FTSSVTKWKTIFSGCFEFRVVELTTTETAMMLSEKTQ***R 196
Score = 151 bits (325), Expect(2) = 6e-048
Identities = 65/102 (63%), Positives = 72/102 (70%)
Frame = +1 / -3
Query: 157 LCSHSCQTMPXXXXXXXXXXXXXKQPCQGASSL*P*N*QQLKQQGCCLRRHKNDRGCYPS 336
LC+HS QT P KQ QGA + *N* Q + + CC R+H +DRGCYPS
Sbjct: 362 LCNHSRQTTPSLDHSSPRRSPNGKQSFQGALNSEL*N*PQQRPR*CCPRKHNSDRGCYPS 183
Query: 337 DCSALLGSYPKTSSEARDS*TXPWLTGHQGNKVPLGAPQQQS 462
DCSALLGSYP+TSSEAR S*T PWLTGHQGNK PLGAPQQQS
Sbjct: 182 DCSALLGSYPRTSSEARHS*TIPWLTGHQGNKAPLGAPQQQS 57
Score = 104 bits (221), Expect(2) = 2e-045
Identities = 47/64 (73%), Positives = 51/64 (79%)
Frame = -3 / +3
Query: 204 *TMLR*RHGLA*MTTEGSLWRYKRWRTLPGSMHRMFPFLNSYRMLLHRSSTSLAVVVVEH 25
*TM++* GL *M TEG LWRYKRWRT PG M RMF FLNS RMLLHR STSL VV+VEH
Sbjct: 315 *TMIQ*GRGLP*MITEGPLWRYKRWRTSPG*MLRMFLFLNSSRMLLHRISTSLEVVIVEH 494
Query: 24 QLNS 13
Q +S
Sbjct: 495 QSSS 506
Score = 99.1 bits (210), Expect(2) = 2e-045
Identities = 46/54 (85%), Positives = 47/54 (87%)
Frame = -3 / +3
Query: 459 LLLRSSQRDFIALVSG*PWXGSRVPSFRGSFRIGAQQCRAI*GITASIIFVSSQ 298
LLLRSSQR FIALVSG*PW GSRVPSFRGS IGAQQCRAI*GITASI V S+
Sbjct: 60 LLLRSSQRGFIALVSG*PWNGSRVPSFRGSSWIGAQQCRAI*GITASITIVFSR 221
Score = 59.7 bits (124), Expect(2) = 6e-048
Identities = 27/34 (79%), Positives = 28/34 (82%)
Frame = +1 / -3
Query: 19 *LVFHDYHCQRSRTSV*QHSVAV*EREHTMH*AR 120
*LVFHDYH QRSR SV*QH AV*E+EHT H AR
Sbjct: 500 *LVFHDYHFQRSRNSV*QHPGAV*EQEHTKHLAR 399
Score = 44.1 bits (90), Expect(2) = 2e-054
Identities = 19/19 (100%), Positives = 19/19 (100%)
Frame = +3 / -2
Query: 405 MVNRTPRQ*SPFGSSSAAI 461
MVNRTPRQ*SPFGSSSAAI
Sbjct: 114 MVNRTPRQ*SPFGSSSAAI 58
>gb|CF133702.1|CF133702 WHE4362_C07_F14ZT Wheat meiotic floret cDNA library Triticum
aestivum cDNA clone WHE4362_C07_F14, mRNA sequence
Length = 747
Score = 169 bits (363), Expect = 2e-041
Identities = 66/76 (86%), Positives = 71/76 (93%)
Frame = -2 / +3
Query: 229 VFHLVTDELNYAPMKAWFGMNDYRGVTVEIQKVEDFTWLNASYVPVLKQLQNAATQKFYF 50
VFHLVTDE+NY PM+AWF +NDYRG VEIQKVEDFTWLNASYVPVLKQLQ+AATQ FYF
Sbjct: 12 VFHLVTDEVNYDPMRAWFALNDYRGAIVEIQKVEDFTWLNASYVPVLKQLQDAATQNFYF 191
Query: 49 SGSGSRGTPIKFRNPK 2
SGSG+RGTPIKFRNPK
Sbjct: 192 SGSGNRGTPIKFRNPK 239
Score = 140 bits (300), Expect = 1e-032
Identities = 62/76 (81%), Positives = 65/76 (85%)
Frame = +3 / -3
Query: 3 FGFLNLIGVPRLPLPEK*NFCVAAFCSCLRTGTYDALSQVKSSTFCISTVTPL*SFMPNH 182
FGFLNLIGVPRLPLPEK* FCVAA SCLRTGTY+A SQVKSSTFCIST+ PL*SF N
Sbjct: 238 FGFLNLIGVPRLPLPEK*KFCVAASWSCLRTGTYEAFSQVKSSTFCISTMAPL*SFKANQ 59
Query: 183 AFIGA*FNSSVTK*KT 230
A IG+* SSVTK*KT
Sbjct: 58 ALIGS*LTSSVTK*KT 11
Score = 121 bits (259), Expect = 5e-027
Identities = 51/76 (67%), Positives = 58/76 (76%)
Frame = +2 / -2
Query: 2 LWVPEFNWCSTTTTAREVELLCSSIL*LFKNGNIRCIEPGKVLHLLYLHSDPSVVIHAKP 181
LW+ E +WCS TT+REVE+LCSSIL LFKN NIR I PG+VLHLLYLH+ PSVVI KP
Sbjct: 239 LWISELDWCSAITTSREVEILCSSILELFKNRNIRSI*PGEVLHLLYLHNGPSVVIQGKP 60
Query: 182 CLHRSIVQLISH*VKN 229
H IV LI H +KN
Sbjct: 59 SPHWIIVDLIGHQMKN 12
Score = 121 bits (258), Expect = 7e-027
Identities = 52/75 (69%), Positives = 60/75 (80%)
Frame = -1 / +2
Query: 227 FSLSD**VELCSDEGMVWHE*LQRGHCGDTKGGGLYLAQCIVCSRS*TATECCYTEVLLL 48
FS D * +L S+EG+V E*LQRGHCGDTKGGGL+LA+C VCS S*TA CCYTE LLL
Sbjct: 14 FSFGDR*GQL*SNEGLVCLE*LQRGHCGDTKGGGLHLAKCFVCSCS*TAPGCCYTEFLLL 193
Query: 47 WQW*SWNTN*IQEPK 3
W+W*S NTN +Q+ K
Sbjct: 194 WKW*SRNTNQVQKSK 238
Score = 105 bits (225), Expect = 3e-022
Identities = 48/67 (71%), Positives = 52/67 (77%)
Frame = -3 / +1
Query: 201 TMLR*RHGLA*MTTEGSLWRYKRWRTLPGSMHRMFPFLNSYRMLLHRSSTSLAVVVVEHQ 22
TM++* GL *MTTEG LWRYKRWRT PG M RMF FLNS RMLLHR STSL VV+ EHQ
Sbjct: 40 TMIQ*GLGLP*MTTEGPLWRYKRWRTSPG*MLRMFLFLNSSRMLLHRISTSLEVVIAEHQ 219
Query: 21 LNSGTQS 1
+S QS
Sbjct: 220 SSSEIQS 240
>gb|BQ167675.1|BQ167675 WHE0084_C10_E20ZK Cheyenne wheat endosperm cDNA library Triticum
aestivum cDNA clone WHE0084_C10_E20, mRNA sequence
Length = 551
Score = 129 bits (277), Expect(2) = 1e-037
Identities = 45/80 (56%), Positives = 64/80 (80%)
Frame = -2 / +2
Query: 343 SNLRDNSLYHFCVFSDNILAVSVVVNSTAINSRHPDKVVFHLVTDELNYAPMKAWFGMND 164
+ L DN+LYHFC+FSDN+LA SVVVNST N+ HP ++VFH+VTD +N+ M WF +ND
Sbjct: 272 TRLVDNNLYHFCIFSDNVLATSVVVNSTVSNANHPQQLVFHVVTDRINFGAMSTWFLIND 451
Query: 163 YRGVTVEIQKVEDFTWLNAS 104
++G TVE+ +++F+WLNA+
Sbjct: 452 FKGCTVEVHCIDEFSWLNAA 511
Score = 47.3 bits (97), Expect(2) = 1e-037
Identities = 17/48 (35%), Positives = 30/48 (62%)
Frame = -2 / +2
Query: 514 SLXEKSKVXXXKXTXXXXIAAEELPKGLYCLGVRLTMXWFKSPELQRK 371
+L E++K + +AAE LPK ++CL V+LT W ++P+L+ +
Sbjct: 107 ALEERAKAAVVQTAEFGQLAAESLPKNIHCLTVKLTEEWLQNPKLRSR 250
>gb|CA498726.1|CA498726 WHE3246_H11_O22ZT Wheat meiotic anther cDNA library Triticum
aestivum cDNA clone WHE3246_H11_O22, mRNA sequence
Length = 728
Score = 134 bits (288), Expect = 5e-031
Identities = 52/102 (50%), Positives = 72/102 (70%)
Frame = -2 / +2
Query: 337 LRDNSLYHFCVFSDNILAVSVVVNSTAINSRHPDKVVFHLVTDELNYAPMKAWFGMNDYR 158
L D L+H+ VFSDN+LA +VVVNST ++++ P VFH+VTD LNYA MK WF N
Sbjct: 107 LEDPELHHYAVFSDNVLAAAVVVNSTLVHAKKPANHVFHIVTDRLNYAAMKMWFLANPLG 286
Query: 157 GVTVEIQKVEDFTWLNASYVPVLKQLQNAATQKFYFSGSGSR 32
V++Q +E+FTWLN+SY PVLKQL++++ +YF +R
Sbjct: 287 EAAVQVQNIEEFTWLNSSYSPVLKQLESSSMIDYYFGSGKAR 412
>gb|CA499038.1|CA499038 WHE4002_F10_K20ZT Wheat meiotic anther cDNA library Triticum
aestivum cDNA clone WHE4002_F10_K20, mRNA sequence
Length = 641
Score = 134 bits (288), Expect = 5e-031
Identities = 52/102 (50%), Positives = 72/102 (70%)
Frame = -2 / +1
Query: 337 LRDNSLYHFCVFSDNILAVSVVVNSTAINSRHPDKVVFHLVTDELNYAPMKAWFGMNDYR 158
L D L+H+ VFSDN+LA +VVVNST ++++ P VFH+VTD LNYA MK WF N
Sbjct: 289 LEDPELHHYAVFSDNVLAAAVVVNSTLVHAKKPANHVFHIVTDRLNYAAMKMWFLANPLG 468
Query: 157 GVTVEIQKVEDFTWLNASYVPVLKQLQNAATQKFYFSGSGSR 32
V++Q +E+FTWLN+SY PVLKQL++++ +YF +R
Sbjct: 469 EAAVQVQNIEEFTWLNSSYSPVLKQLESSSMIDYYFGSGKAR 594
>gb|BE489408.1|BE489408 WHE1071-1074_G03_G03ZS Wheat unstressed seedling shoot normalized
cDNA library Triticum aestivum cDNA clone
WHE1071-1074_G03_G03, mRNA sequence
Length = 589
Score = 123 bits (263), Expect = 2e-027
Identities = 42/74 (56%), Positives = 60/74 (81%)
Frame = -2 / +1
Query: 325 SLYHFCVFSDNILAVSVVVNSTAINSRHPDKVVFHLVTDELNYAPMKAWFGMNDYRGVTV 146
+LYHFC+FSDN+LA SVVVNST N+ HP ++VFH+VTD +N+ M WF +ND++G TV
Sbjct: 1 NLYHFCIFSDNVLATSVVVNSTVSNANHPQQLVFHVVTDRINFGAMSTWFLINDFKGCTV 180
Query: 145 EIQKVEDFTWLNAS 104
E+ +++F+WLNA+
Sbjct: 181 EVHCIDEFSWLNAA 222
>gb|BE488685.1|BE488685 WHE1053_F05_L09ZS Wheat unstressed seedling shoot normalized cDNA
library Triticum aestivum cDNA clone WHE1053_F05_L09,
mRNA sequence
Length = 624
Score = 122 bits (262), Expect = 2e-027
Identities = 42/73 (57%), Positives = 59/73 (80%)
Frame = -2 / +3
Query: 322 LYHFCVFSDNILAVSVVVNSTAINSRHPDKVVFHLVTDELNYAPMKAWFGMNDYRGVTVE 143
LYHFC+FSDN+LA SVVVNST N+ HP ++VFH+VTD +N+ M WF +ND++G TVE
Sbjct: 3 LYHFCIFSDNVLATSVVVNSTVSNANHPQQLVFHVVTDRINFGAMSTWFLINDFKGCTVE 182
Query: 142 IQKVEDFTWLNAS 104
+ +++F+WLNA+
Sbjct: 183 VHCIDEFSWLNAA 221
>gb|BE488842.1|BE488842 WHE1078_E09_J18ZS Wheat unstressed seedling shoot normalized cDNA
library Triticum aestivum cDNA clone WHE1078_E09_J18,
mRNA sequence
Length = 584
Score = 122 bits (262), Expect = 2e-027
Identities = 42/73 (57%), Positives = 59/73 (80%)
Frame = -2 / +3
Query: 322 LYHFCVFSDNILAVSVVVNSTAINSRHPDKVVFHLVTDELNYAPMKAWFGMNDYRGVTVE 143
LYHFC+FSDN+LA SVVVNST N+ HP ++VFH+VTD +N+ M WF +ND++G TVE
Sbjct: 3 LYHFCIFSDNVLATSVVVNSTVSNANHPQQLVFHVVTDRINFGAMSTWFLINDFKGCTVE 182
Query: 142 IQKVEDFTWLNAS 104
+ +++F+WLNA+
Sbjct: 183 VHCIDEFSWLNAA 221
>gb|BE489330.1|BE489330 WHE1076_B10_C20ZS Wheat unstressed seedling shoot normalized cDNA
library Triticum aestivum cDNA clone WHE1076_B10_C20,
mRNA sequence
Length = 598
Score = 122 bits (262), Expect = 2e-027
Identities = 42/73 (57%), Positives = 59/73 (80%)
Frame = -2 / +3
Query: 322 LYHFCVFSDNILAVSVVVNSTAINSRHPDKVVFHLVTDELNYAPMKAWFGMNDYRGVTVE 143
LYHFC+FSDN+LA SVVVNST N+ HP ++VFH+VTD +N+ M WF +ND++G TVE
Sbjct: 3 LYHFCIFSDNVLATSVVVNSTVSNANHPQQLVFHVVTDRINFGAMSTWFLINDFKGCTVE 182
Query: 142 IQKVEDFTWLNAS 104
+ +++F+WLNA+
Sbjct: 183 VHCIDEFSWLNAA 221
>gb|BF473437.1|BF473437 WHE0924_D08_H16ZS Wheat 5-15 DAP spike cDNA library Triticum
aestivum cDNA clone WHE0924_D08_H16, mRNA sequence
Length = 570
Score = 120 bits (257), Expect = 1e-026
Identities = 49/104 (47%), Positives = 68/104 (65%)
Frame = -2 / +3
Query: 337 LRDNSLYHFCVFSDNILAVSVVVNSTAINSRHPDKVVFHLVTDELNYAPMKAWFGMNDYR 158
L D +L+H+ +FSDN+LA SVVV S NS+ P K VFH+VTD +N M+ + D +
Sbjct: 87 LEDPALFHYAIFSDNVLAASVVVRSCVANSQDPSKHVFHVVTDRMNLGAMQVIIRLMDLQ 266
Query: 157 GVTVEIQKVEDFTWLNASYVPVLKQLQNAATQKFYFSGSGSRGT 26
G E++ ED+ +LN+SYVPVL+QL++A QKFYF T
Sbjct: 267 GAHYEVKAYEDYKFLNSSYVPVLRQLESANLQKFYFENKLENAT 398
>gb|BQ241368.1|BQ241368 TaE05006A03R TaE05 Triticum aestivum cDNA clone TaE05006A03R, mRNA
sequence
Length = 583
Score = 120 bits (256), Expect = 1e-026
Identities = 45/84 (53%), Positives = 62/84 (73%)
Frame = -2 / +3
Query: 340 NLRDNSLYHFCVFSDNILAVSVVVNSTAINSRHPDKVVFHLVTDELNYAPMKAWFGMNDY 161
NL + LYH+ +FSDN+LA SVVVNST +N++ P+K VFHLVTD+LN+ M WF +N
Sbjct: 330 NLENPELYHYALFSDNVLAASVVVNSTIMNAKEPEKHVFHLVTDKLNFGAMNMWFLLNPP 509
Query: 160 RGVTVEIQKVEDFTWLNASYVPVL 89
T+ ++ V++F WLN+SY PVL
Sbjct: 510 GKATIHVENVDEFKWLNSSYCPVL 581
>gb|BJ267673.1|BJ267673 BJ267673 Y. Ogihara unpublished cDNA library, Wh_oh Triticum
aestivum cDNA clone whoh12l24 5', mRNA sequence
Length = 693
Score = 85.4 bits (180), Expect(2) = 8e-026
Identities = 32/71 (45%), Positives = 47/71 (66%)
Frame = -2 / +1
Query: 247 RHPDKVVFHLVTDELNYAPMKAWFGMNDYRGVTVEIQKVEDFTWLNASYVPVLKQLQNAA 68
+HP + VFH+VTD LNYAPM+ WF N T+E+Q +++FTWLN S +LKQL + +
Sbjct: 235 QHPSRHVFHIVTDRLNYAPMRMWFLSNPPGKATIEVQNIDEFTWLNDSSSLLLKQLGSQS 414
Query: 67 TQKFYFSGSGS 35
+YF+ +
Sbjct: 415 MIDYYFTAQSA 447
Score = 51.9 bits (107), Expect(2) = 8e-026
Identities = 20/34 (58%), Positives = 26/34 (76%)
Frame = -2 / +2
Query: 346 QSNLRDNSLYHFCVFSDNILAVSVVVNSTAINSR 245
Q L D LYH+ +FSDNILA +VVVNST +N++
Sbjct: 56 QEKLDDPKLYHYALFSDNILATAVVVNSTVLNAK 157
>gb|BJ267672.1|BJ267672 BJ267672 Y. Ogihara unpublished cDNA library, Wh_oh Triticum
aestivum cDNA clone whoh12l23 5', mRNA sequence
Length = 682
Score = 85.4 bits (180), Expect(2) = 8e-026
Identities = 32/71 (45%), Positives = 47/71 (66%)
Frame = -2 / +1
Query: 247 RHPDKVVFHLVTDELNYAPMKAWFGMNDYRGVTVEIQKVEDFTWLNASYVPVLKQLQNAA 68
+HP + VFH+VTD LNYAPM+ WF N T+E+Q +++FTWLN S +LKQL + +
Sbjct: 235 QHPSRHVFHIVTDRLNYAPMRMWFLSNPPGKATIEVQNIDEFTWLNDSSSLLLKQLGSQS 414
Query: 67 TQKFYFSGSGS 35
+YF+ +
Sbjct: 415 MIDYYFTAQSA 447
Score = 51.9 bits (107), Expect(2) = 8e-026
Identities = 20/34 (58%), Positives = 26/34 (76%)
Frame = -2 / +2
Query: 346 QSNLRDNSLYHFCVFSDNILAVSVVVNSTAINSR 245
Q L D LYH+ +FSDNILA +VVVNST +N++
Sbjct: 56 QEKLDDPKLYHYALFSDNILATAVVVNSTVLNAK 157
>gb|BE489749.1|BE489749 WHE1071-1074_H18_H18ZS Wheat unstressed seedling shoot normalized
cDNA library Triticum aestivum cDNA clone
WHE1071-1074_H18_H18, mRNA sequence
Length = 599
Score = 102 bits (217), Expect(2) = 8e-024
Identities = 36/59 (61%), Positives = 47/59 (79%)
Frame = -2 / +3
Query: 322 LYHFCVFSDNILAVSVVVNSTAINSRHPDKVVFHLVTDELNYAPMKAWFGMNDYRGVTV 146
LYHFC+FSDN+LA SVVVNST N+ HP ++VFH+VTD +N+ M WF +ND++G TV
Sbjct: 3 LYHFCIFSDNVLATSVVVNSTVSNANHPQQLVFHVVTDRINFGAMSTWFLINDFKGCTV 179
Score = 28.1 bits (55), Expect(2) = 8e-024
Identities = 8/19 (42%), Positives = 15/19 (78%)
Frame = -2 / +1
Query: 160 RGVTVEIQKVEDFTWLNAS 104
+GV E+ +++F+WLNA+
Sbjct: 166 KGVLCEVHCIDEFSWLNAA 222
>gb|DR740515.1|DR740515 FGAS000462 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 1160
Score = 106 bits (227), Expect = 1e-022
Identities = 43/48 (89%), Positives = 45/48 (93%)
Frame = -2 / +1
Query: 145 EIQKVEDFTWLNASYVPVLKQLQNAATQKFYFSGSGSRGTPIKFRNPK 2
E QKVED TWLNASYVPVLKQLQ+AATQ FYFSGSG+RGTPIKFRNPK
Sbjct: 16 EXQKVEDXTWLNASYVPVLKQLQDAATQNFYFSGSGNRGTPIKFRNPK 159
>gb|BE606954.1|BE606954 WHE0914_H07_O14ZS Wheat 5-15 DAP spike cDNA library Triticum
aestivum cDNA clone WHE0914_H07_O14, mRNA sequence
Length = 576
Score = 105 bits (224), Expect = 4e-022
Identities = 40/72 (55%), Positives = 52/72 (72%)
Frame = -2 / +2
Query: 346 QSNLRDNSLYHFCVFSDNILAVSVVVNSTAINSRHPDKVVFHLVTDELNYAPMKAWFGMN 167
Q L D LYH+ +FSDNILA +VVVNST +N++HP + VFH+VTD LNYAPM+ WF N
Sbjct: 359 QEKLDDPKLYHYALFSDNILATAVVVNSTVLNAKHPSRHVFHIVTDRLNYAPMRMWFLSN 538
Query: 166 DYRGVTVEIQKV 131
T+E+Q +
Sbjct: 539 PPGKATIEVQNI 574
Database: Triticum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 3:01 PM
Number of letters in database: 367,240,239
Number of sequences in database: 636,343
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 452,869,594
Number of Sequences: 636343
Number of extensions: 6161133
Number of successful extensions: 117878
Number of sequences better than 1.0e-020: 19
length of database: 122,413,413
effective HSP length: 52
effective length of database: 89,323,577
effective search space used: 10629505663
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)