TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2192701.2.2
(654 letters)
Database: Triticum_nucl_with_EST.fasta
636,343 sequences; 367,240,239 total letters
Score E
Sequences producing significant alignments: (bits) Value
emb|AX406854.1| Sequence 15 from Patent WO0222821 281 8e-096
gb|CA626214.1|CA626214 wl1n.pk0135.g6 wl1n Triticum aestivu... 190 3e-072
gb|CA626283.1|CA626283 wl1n.pk0131.d3 wl1n Triticum aestivu... 139 2e-053
gb|BJ207394.1|BJ207394 BJ207394 Y. Ogihara unpublished cDNA... 167 2e-041
gb|CK214575.1|CK214575 FGAS026503 Triticum aestivum FGAS: L... 167 2e-041
gb|CK214574.1|CK214574 FGAS026502 Triticum aestivum FGAS: L... 167 2e-041
gb|CN012436.1|CN012436 WHE3896_F09_K18ZS Wheat Fusarium gra... 167 2e-041
gb|CV766971.1|CV766971 FGAS061358 Triticum aestivum FGAS: L... 164 2e-040
gb|AJ612828.1|AJ612828 AJ612828 Triticum turgidum subsp. du... 164 2e-040
gb|BQ838847.1|BQ838847 WHE3593_D05_H09ZS Wheat developing g... 164 2e-040
gb|CD898645.1|CD898645 G174.109K13F010824 G174 Triticum aes... 164 2e-040
gb|BJ310404.1|BJ310404 BJ310404 Y. Ogihara unpublished cDNA... 164 2e-040
gb|CD890425.1|CD890425 G118.114J21F010717 G118 Triticum aes... 162 4e-040
gb|BF474214.1|BF474214 WHE0841_D12_G23ZS Wheat vernalized c... 164 8e-040
gb|AL808362.1|AL808362 AL808362 a:22 Triticum aestivum cDNA... 164 8e-040
emb|AX406849.1| Sequence 10 from Patent WO0222821 164 8e-040
gb|CK153563.1|CK153563 FGAS032195 Triticum aestivum FGAS: T... 162 4e-039
gb|CK214484.1|CK214484 FGAS026409 Triticum aestivum FGAS: L... 160 4e-039
gb|CD895503.1|CD895503 G174.100A09F010705 G174 Triticum aes... 121 4e-033
gb|CA725087.1|CA725087 wds3f.pk003.n19 wds3f Triticum aesti... 128 1e-029
gb|BF484849.1|BF484849 WHE2320_D02_H04ZS Wheat pre-anthesis... 123 1e-027
gb|BJ214671.1|BJ214671 BJ214671 Y. Ogihara unpublished cDNA... 110 1e-023
gb|CA616999.1|CA616999 wl1n.pk0010.f7 wl1n Triticum aestivu... 49 6e-022
>emb|AX406854.1| Sequence 15 from Patent WO0222821
Length = 769
Score = 281 bits (608), Expect(2) = 8e-096
Identities = 108/137 (78%), Positives = 109/137 (79%)
Frame = +2 / +2
Query: 242 NLNPWECSPKCGSRCSKTQYRKACLTLCNKCCAKCLCVPPGFYGNKGACPCYNNWKTKEG 421
NLNPWECSPKCGSRCSKTQYRKACLTLCNKCCAKCLCVPPGFYGNKGACPCYNNWKT+EG
Sbjct: 203 NLNPWECSPKCGSRCSKTQYRKACLTLCNKCCAKCLCVPPGFYGNKGACPCYNNWKTREG 382
Query: 422 GPKCP*KIHXXXXXXXXXXXXIWNVLFIXXHPLXXAFYY*YNASVXXLLNLECYQPDLHA 601
GPKCP*KIH IWNVLFI HPL AFYY*YNASV LLNLECYQPDLHA
Sbjct: 383 GPKCP*KIHRSSRPPLSPLLRIWNVLFIFDHPLGLAFYY*YNASVRPLLNLECYQPDLHA 562
Query: 602 LXXAXXXXXDYXXGXHV 652
L A DY G HV
Sbjct: 563 LL*ATRQSEDY*VGWHV 613
Score = 235 bits (508), Expect(3) = 6e-067
Identities = 108/138 (78%), Positives = 109/138 (78%)
Frame = +1 / +1
Query: 241 QPESLGVLAQVRVAVLQDAVQEGLPHLM*QVLRQVPLRATGVXXXXXXXXXXXXXENQGR 420
QPESLGVLAQVRVAVLQDAVQEGLPHLM QVLRQVPLRATGV EN GR
Sbjct: 202 QPESLGVLAQVRVAVLQDAVQEGLPHLMQQVLRQVPLRATGVLRQQGRLPLLQQLENPGR 381
Query: 421 RAQVPLEDPPQLPSAIVPSSPNLERVVHLXPPPXXGILLLV*C*CXXIA*SGMLPARSPC 600
RAQVPLEDPPQLPSAIVP SPNLERVVHL PPP GILLLV*C*C +A*SGMLPARSPC
Sbjct: 382 RAQVPLEDPPQLPSAIVPPSPNLERVVHLRPPPRLGILLLV*C*CPPVA*SGMLPARSPC 561
Query: 601 SXXSXXAXXGLLXRXACH 654
S S A GLL R ACH
Sbjct: 562 SPVSHSAE*GLLGRVACH 615
Score = 233 bits (504), Expect(2) = 5e-070
Identities = 107/156 (68%), Positives = 107/156 (68%)
Frame = -3 / -1
Query: 652 DMXXXXVILXXXXGXXESMEIWLVAFQIKQXXXTSIILVIKCXXXGVXXDEQHVPDSEKR 473
DM VIL G ESMEIWLVAFQIKQ TSIILVIKC GV DEQHVPDSEK
Sbjct: 613 DMPPYLVILTLPSGSQESMEIWLVAFQIKQRADTSIILVIKCQA*GVVEDEQHVPDSEKG 434
Query: 472 GQWRTGAAVDLLGALGPSFLGFPXXXXXXXXXXXVEPRWHAEALGAALVT*GEAGLPVLR 293
GQWRTGAAVDLLGALGPSF GFP VEPRWHAEALGAALV *GEAGLPVLR
Sbjct: 433 GQWRTGAAVDLLGALGPSFPGFPVVVAGAGALVAVEPRWHAEALGAALVA*GEAGLPVLR 254
Query: 292 LGAPRPALGRALPGIQVXXXXXXXXXXXXXXXXALL 185
LGAPRPALGRALPGIQV A L
Sbjct: 253 LGAPRPALGRALPGIQVAASASANTASASAFTAAAL 146
Score = 187 bits (403), Expect = 1e-046
Identities = 81/118 (68%), Positives = 81/118 (68%)
Frame = +3 / +3
Query: 300 TGRPASPYVTSAAPSASACHRGSXXXXXXXXXXXXGKPRKEGPSAPRRSTAAPVRHCPLF 479
TGRPASPY TSAAPSASACHRGS GKP KEGPSAPRRSTAAPVRHCP F
Sbjct: 261 TGRPASPYATSAAPSASACHRGSTATRAPAPATTTGKPGKEGPSAPRRSTAAPVRHCPPF 440
Query: 480 SESGXXXXXXXXPXXWHFITSIMLVXXHCLIWNATSQISMLSXXPXXXXRITX*XXMS 653
SESG P WHFITSIMLV CLIWNATSQISMLS P RIT * MS
Sbjct: 441 SESGTCCSSSTTP*AWHFITSIMLVSARCLIWNATSQISMLSCEPLGRVRITR*GGMS 614
Score = 157 bits (338), Expect(5) = 6e-083
Identities = 68/83 (81%), Positives = 68/83 (81%)
Frame = -1 / -2
Query: 654 MTCXPX**SXXXXXAXXRAWRSGW*HSRLSNXXTLALY***NAXXRGWXKMNNTFQIRRR 475
MTC P **S A RAWRSGW*HSRLSN TLALY***NA RGW KMNNTFQIRRR
Sbjct: 615 MTCHPT**SSLCRVAHRRAWRSGW*HSRLSNGRTLALY***NAKPRGWSKMNNTFQIRRR 436
Query: 474 GDNGGRELRWIF*GHLGPPSLVF 406
GDNGGRELRWIF*GHLGPPS VF
Sbjct: 435 GDNGGRELRWIF*GHLGPPSRVF 367
Score = 96.8 bits (205), Expect(5) = 6e-083
Identities = 37/37 (100%), Positives = 37/37 (100%)
Frame = -1 / -2
Query: 354 TQRHLAQHLLHKVRQAFLYCVLEHRDPHLGEHSQGFR 244
TQRHLAQHLLHKVRQAFLYCVLEHRDPHLGEHSQGFR
Sbjct: 315 TQRHLAQHLLHKVRQAFLYCVLEHRDPHLGEHSQGFR 205
Score = 90.4 bits (191), Expect(2) = 8e-096
Identities = 38/43 (88%), Positives = 39/43 (90%)
Frame = +1 / +1
Query: 64 LRQRGRPTRTSDGDQGHLLPVARIPAPRRRLSRVCSAAAGEEG 192
+RQR RPTRTSDGDQGHLLP ARI APRRR SRVCSAAAGEEG
Sbjct: 22 VRQRRRPTRTSDGDQGHLLPGARIRAPRRRFSRVCSAAAGEEG 150
Score = 79.0 bits (166), Expect(3) = 9e-039
Identities = 33/43 (76%), Positives = 33/43 (76%)
Frame = -2 / -3
Query: 653 *HAXLXSNPXXAXWLXXEHGDLAGSIPD*AMXXH*HYTSNKMP 525
*HA L SNP A WL EHGDLAGSIPD*A H*HYTSNKMP
Sbjct: 614 *HATLPSNPHSAEWLTGEHGDLAGSIPD*ATGGH*HYTSNKMP 486
Score = 72.5 bits (152), Expect(5) = 6e-083
Identities = 30/33 (90%), Positives = 30/33 (90%)
Frame = -1 / -2
Query: 189 FFTCCRRADTGKATARSRDASNRKQMTLVAIAR 91
FFTCCRRADTGKATARS DAS RKQMTLV IAR
Sbjct: 147 FFTCCRRADTGKATARSTDASTRKQMTLVTIAR 49
Score = 69.8 bits (146), Expect(3) = 9e-039
Identities = 28/42 (66%), Positives = 28/42 (66%)
Frame = -2 / -3
Query: 365 TPVARRGTWRSTCYIR*GRPSCXXXXXXXXXXXXXTPRDSGC 240
TPVARRGTWRSTC IR*GRPSC TPRDSGC
Sbjct: 326 TPVARRGTWRSTCCIR*GRPSCTASWSTATRTWASTPRDSGC 201
Score = 51.9 bits (107), Expect(2) = 5e-070
Identities = 26/42 (61%), Positives = 26/42 (61%)
Frame = -3 / -1
Query: 190 LLHLLPQSRHGKXXXXXXXXXXXXXXDLGRHRSSLLAAPFA* 65
LLHLLPQSRHGK DLG HRSSLLAA FA*
Sbjct: 148 LLHLLPQSRHGKSDGEEHGCEHQEADDLGHHRSSLLAASFA* 23
Score = 50.6 bits (104), Expect(3) = 9e-039
Identities = 19/20 (95%), Positives = 19/20 (95%)
Frame = -2 / -3
Query: 467 MADGSCGGSSRGTWALLPWF 408
MADGSCGGSSRGTWALLP F
Sbjct: 428 MADGSCGGSSRGTWALLPGF 369
Score = 37.7 bits (76), Expect(5) = 6e-083
Identities = 15/17 (88%), Positives = 16/17 (94%)
Frame = -2 / -3
Query: 113 *PWSPSLVLVGRPLCLS 63
*PWSPSLVLVGR LCL+
Sbjct: 71 *PWSPSLVLVGRLLCLT 21
Score = 29.5 bits (58), Expect(3) = 6e-067
Identities = 11/12 (91%), Positives = 11/12 (91%)
Frame = +3 / +3
Query: 66 QAKGAANKDERW 101
QAK AANKDERW
Sbjct: 24 QAKEAANKDERW 59
Score = 29.0 bits (57), Expect(3) = 6e-067
Identities = 14/33 (42%), Positives = 14/33 (42%)
Frame = +2 / +2
Query: 92 RAMATKVICXXXXXXXXXXXXXXXXXXRQQVKK 190
RAM TKVIC RQQVKK
Sbjct: 50 RAMVTKVICFLVLASVLLAVAFPVSALRQQVKK 148
Score = 21.7 bits (41), Expect(5) = 6e-083
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = -3 / -3
Query: 61 CLTKGGEKL 35
CLTKG EKL
Sbjct: 29 CLTKGREKL 3
>gb|CA626214.1|CA626214 wl1n.pk0135.g6 wl1n Triticum aestivum cDNA clone wl1n.pk0135.g6 5'
end, mRNA sequence
Length = 533
Score = 190 bits (409), Expect(3) = 3e-072
Identities = 66/69 (95%), Positives = 68/69 (98%)
Frame = +2 / +3
Query: 242 NLNPWECSPKCGSRCSKTQYRKACLTLCNKCCAKCLCVPPGFYGNKGACPCYNNWKTKEG 421
NLNPWECSPKCGSRCSKTQYRKACLTLCNKCCAKCLCVPPGFYGNKGACPCYNNW+ KEG
Sbjct: 204 NLNPWECSPKCGSRCSKTQYRKACLTLCNKCCAKCLCVPPGFYGNKGACPCYNNWENKEG 383
Query: 422 GPKCP*KIH 448
GPKCP*KI+
Sbjct: 384 GPKCP*KIN 410
Score = 133 bits (285), Expect(5) = 2e-058
Identities = 61/98 (62%), Positives = 63/98 (64%)
Frame = -3 / -1
Query: 478 KRGQWRTGAAVDLLGALGPSFLGFPXXXXXXXXXXXVEPRWHAEALGAALVT*GEAGLPV 299
+RG G+ VDLLGALGPSFL FP VEPRWHAEALGAALV *GEAGLPV
Sbjct: 440 RRGTMADGSCVDLLGALGPSFLVFPVVVAGAGALVAVEPRWHAEALGAALVA*GEAGLPV 261
Query: 298 LRLGAPRPALGRALPGIQVXXXXXXXXXXXXXXXXALL 185
LRLGAPRPALGRALPGIQV A L
Sbjct: 260 LRLGAPRPALGRALPGIQVAASASANTASASAFTAAAL 147
Score = 96.8 bits (205), Expect(5) = 2e-039
Identities = 37/37 (100%), Positives = 37/37 (100%)
Frame = -1 / -2
Query: 354 TQRHLAQHLLHKVRQAFLYCVLEHRDPHLGEHSQGFR 244
TQRHLAQHLLHKVRQAFLYCVLEHRDPHLGEHSQGFR
Sbjct: 316 TQRHLAQHLLHKVRQAFLYCVLEHRDPHLGEHSQGFR 206
Score = 91.8 bits (194), Expect(5) = 7e-031
Identities = 41/42 (97%), Positives = 41/42 (97%)
Frame = +1 / +2
Query: 241 QPESLGVLAQVRVAVLQDAVQEGLPHLM*QVLRQVPLRATGV 366
QPESLGVLAQVRVAVLQDAVQEGLPHLM QVLRQVPLRATGV
Sbjct: 203 QPESLGVLAQVRVAVLQDAVQEGLPHLMQQVLRQVPLRATGV 328
Score = 90.4 bits (191), Expect(3) = 3e-072
Identities = 38/43 (88%), Positives = 39/43 (90%)
Frame = +1 / +2
Query: 64 LRQRGRPTRTSDGDQGHLLPVARIPAPRRRLSRVCSAAAGEEG 192
+RQR RPTRTSDGDQGHLLP ARI APRRR SRVCSAAAGEEG
Sbjct: 23 VRQRRRPTRTSDGDQGHLLPGARIRAPRRRFSRVCSAAAGEEG 151
Score = 72.5 bits (152), Expect(5) = 2e-058
Identities = 30/33 (90%), Positives = 30/33 (90%)
Frame = -1 / -2
Query: 189 FFTCCRRADTGKATARSRDASNRKQMTLVAIAR 91
FFTCCRRADTGKATARS DAS RKQMTLV IAR
Sbjct: 148 FFTCCRRADTGKATARSTDASTRKQMTLVTIAR 50
Score = 51.9 bits (107), Expect(5) = 2e-039
Identities = 26/42 (61%), Positives = 26/42 (61%)
Frame = -3 / -1
Query: 190 LLHLLPQSRHGKXXXXXXXXXXXXXXDLGRHRSSLLAAPFA* 65
LLHLLPQSRHGK DLG HRSSLLAA FA*
Sbjct: 149 LLHLLPQSRHGKSDGEEHGCEHQEADDLGHHRSSLLAASFA* 24
Score = 37.7 bits (76), Expect(5) = 2e-058
Identities = 15/17 (88%), Positives = 16/17 (94%)
Frame = -2 / -3
Query: 113 *PWSPSLVLVGRPLCLS 63
*PWSPSLVLVGR LCL+
Sbjct: 72 *PWSPSLVLVGRLLCLT 22
Score = 33.6 bits (67), Expect(5) = 2e-058
Identities = 13/15 (86%), Positives = 13/15 (86%)
Frame = -1 / -1
Query: 516 GWXKMNNTFQIRRRG 472
G KMNNTFQIRRRG
Sbjct: 476 GLSKMNNTFQIRRRG 432
Score = 32.7 bits (65), Expect(5) = 7e-031
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = +3 / +3
Query: 414 RKEGPSAPRRSTAAPVRHCP 473
++ GP P + AAPVRHCP
Sbjct: 375 KEGGPKCP*KINAAPVRHCP 434
Score = 31.8 bits (63), Expect(5) = 2e-039
Identities = 12/14 (85%), Positives = 12/14 (85%)
Frame = -3 / -3
Query: 517 GVXXDEQHVPDSEK 476
GV DEQHVPDSEK
Sbjct: 477 GVVEDEQHVPDSEK 436
Score = 31.3 bits (62), Expect(3) = 3e-072
Identities = 12/15 (80%), Positives = 12/15 (80%)
Frame = +1 / +3
Query: 472 PSSPNLERVVHLXPP 516
P SPNLERVVHL P
Sbjct: 432 PPSPNLERVVHLRQP 476
Score = 29.5 bits (58), Expect(5) = 2e-039
Identities = 11/12 (91%), Positives = 11/12 (91%)
Frame = -2 / -3
Query: 443 SSRGTWALLPWF 408
SSRGTWALLP F
Sbjct: 405 SSRGTWALLPCF 370
Score = 29.5 bits (58), Expect(5) = 7e-031
Identities = 11/12 (91%), Positives = 11/12 (91%)
Frame = +3 / +1
Query: 66 QAKGAANKDERW 101
QAK AANKDERW
Sbjct: 25 QAKEAANKDERW 60
Score = 29.0 bits (57), Expect(5) = 7e-031
Identities = 14/33 (42%), Positives = 14/33 (42%)
Frame = +2 / +3
Query: 92 RAMATKVICXXXXXXXXXXXXXXXXXXRQQVKK 190
RAM TKVIC RQQVKK
Sbjct: 51 RAMVTKVICFLVLASVLLAVAFPVSALRQQVKK 149
Score = 26.3 bits (51), Expect(5) = 2e-039
Identities = 9/10 (90%), Positives = 10/10 (100%)
Frame = -1 / -3
Query: 477 RGDNGGRELR 448
+GDNGGRELR
Sbjct: 438 KGDNGGRELR 409
Score = 24.0 bits (46), Expect(5) = 2e-058
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = -3 / -3
Query: 61 CLTKGGEKLR 32
CLTKG EKLR
Sbjct: 30 CLTKGREKLR 1
Score = 23.5 bits (45), Expect(5) = 7e-031
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = +2 / +1
Query: 485 IWNVLFIXXHP 517
IWNVLFI +P
Sbjct: 445 IWNVLFIFDNP 477
>gb|CA626283.1|CA626283 wl1n.pk0131.d3 wl1n Triticum aestivum cDNA clone wl1n.pk0131.d3 5'
end, mRNA sequence
Length = 402
Score = 139 bits (299), Expect(2) = 2e-053
Identities = 51/65 (78%), Positives = 53/65 (81%)
Frame = +2 / +3
Query: 242 NLNPWECSPKCGSRCSKTQYRKACLTLCNKCCAKCLCVPPGFYGNKGACPCYNNWKTKEG 421
NLNPWECSPKCGSRCSKTQYRKACLTLCNKCCAKCLCV PGFYGNKG P K ++G
Sbjct: 204 NLNPWECSPKCGSRCSKTQYRKACLTLCNKCCAKCLCVQPGFYGNKGPAPGKKXGKXRKG 383
Query: 422 GPKCP 436
G P
Sbjct: 384 GQYPP 398
Score = 96.8 bits (205), Expect(4) = 5e-043
Identities = 37/37 (100%), Positives = 37/37 (100%)
Frame = -1 / -3
Query: 354 TQRHLAQHLLHKVRQAFLYCVLEHRDPHLGEHSQGFR 244
TQRHLAQHLLHKVRQAFLYCVLEHRDPHLGEHSQGFR
Sbjct: 316 TQRHLAQHLLHKVRQAFLYCVLEHRDPHLGEHSQGFR 206
Score = 92.3 bits (195), Expect(2) = 9e-028
Identities = 42/61 (68%), Positives = 42/61 (68%)
Frame = -3 / -2
Query: 367 EPRWHAEALGAALVT*GEAGLPVLRLGAPRPALGRALPGIQVXXXXXXXXXXXXXXXXAL 188
EPR HAEALGAALV *GEAGLPVLRLGAPRPALGRALPGIQV A
Sbjct: 329 EPRLHAEALGAALVA*GEAGLPVLRLGAPRPALGRALPGIQVAASASANTASASAFTAAA 150
Query: 187 L 185
L
Sbjct: 149 L 147
Score = 91.8 bits (194), Expect(4) = 1e-026
Identities = 41/42 (97%), Positives = 41/42 (97%)
Frame = +1 / +2
Query: 241 QPESLGVLAQVRVAVLQDAVQEGLPHLM*QVLRQVPLRATGV 366
QPESLGVLAQVRVAVLQDAVQEGLPHLM QVLRQVPLRATGV
Sbjct: 203 QPESLGVLAQVRVAVLQDAVQEGLPHLMQQVLRQVPLRATGV 328
Score = 90.4 bits (191), Expect(2) = 2e-053
Identities = 38/43 (88%), Positives = 39/43 (90%)
Frame = +1 / +2
Query: 64 LRQRGRPTRTSDGDQGHLLPVARIPAPRRRLSRVCSAAAGEEG 192
+RQR RPTRTSDGDQGHLLP ARI APRRR SRVCSAAAGEEG
Sbjct: 23 VRQRRRPTRTSDGDQGHLLPGARIRAPRRRFSRVCSAAAGEEG 151
Score = 72.5 bits (152), Expect(4) = 5e-043
Identities = 30/33 (90%), Positives = 30/33 (90%)
Frame = -1 / -3
Query: 189 FFTCCRRADTGKATARSRDASNRKQMTLVAIAR 91
FFTCCRRADTGKATARS DAS RKQMTLV IAR
Sbjct: 148 FFTCCRRADTGKATARSTDASTRKQMTLVTIAR 50
Score = 51.9 bits (107), Expect(2) = 9e-028
Identities = 26/42 (61%), Positives = 26/42 (61%)
Frame = -3 / -2
Query: 190 LLHLLPQSRHGKXXXXXXXXXXXXXXDLGRHRSSLLAAPFA* 65
LLHLLPQSRHGK DLG HRSSLLAA FA*
Sbjct: 149 LLHLLPQSRHGKSDGEEHGCEHQEADDLGHHRSSLLAASFA* 24
Score = 37.7 bits (76), Expect(4) = 5e-043
Identities = 15/17 (88%), Positives = 16/17 (94%)
Frame = -2 / -1
Query: 113 *PWSPSLVLVGRPLCLS 63
*PWSPSLVLVGR LCL+
Sbjct: 72 *PWSPSLVLVGRLLCLT 22
Score = 29.5 bits (58), Expect(4) = 1e-026
Identities = 11/12 (91%), Positives = 11/12 (91%)
Frame = +3 / +1
Query: 66 QAKGAANKDERW 101
QAK AANKDERW
Sbjct: 25 QAKEAANKDERW 60
Score = 29.0 bits (57), Expect(4) = 1e-026
Identities = 14/33 (42%), Positives = 14/33 (42%)
Frame = +2 / +3
Query: 92 RAMATKVICXXXXXXXXXXXXXXXXXXRQQVKK 190
RAM TKVIC RQQVKK
Sbjct: 51 RAMVTKVICFLVLASVLLAVAFPVSALRQQVKK 149
Score = 24.9 bits (48), Expect(4) = 1e-026
Identities = 11/25 (44%), Positives = 12/25 (48%)
Frame = +2 / +2
Query: 362 GFYGNKGACPCYNNWKTKEGGPKCP 436
G + ACP KT EGGP P
Sbjct: 323 GVLREQRACPW*KXGKTXEGGPISP 397
Score = 24.0 bits (46), Expect(4) = 5e-043
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = -3 / -1
Query: 61 CLTKGGEKLR 32
CLTKG EKLR
Sbjct: 30 CLTKGREKLR 1
>gb|BJ207394.1|BJ207394 BJ207394 Y. Ogihara unpublished cDNA library, Wh Triticum aestivum
cDNA clone wh3i16 5', mRNA sequence
Length = 597
Score = 167 bits (359), Expect(2) = 2e-041
Identities = 58/66 (87%), Positives = 59/66 (89%)
Frame = +2 / +1
Query: 242 NLNPWECSPKCGSRCSKTQYRKACLTLCNKCCAKCLCVPPGFYGNKGACPCYNNWKTKEG 421
NL PWECS KC SRCS TQY+KACLT CNKCCA CLCVPPG YGNKGACPCYNNWKTKEG
Sbjct: 148 NLKPWECSSKCSSRCSGTQYKKACLTYCNKCCATCLCVPPGTYGNKGACPCYNNWKTKEG 327
Query: 422 GPKCP* 439
GPKCP*
Sbjct: 328 GPKCP* 345
Score = 23.1 bits (44), Expect(2) = 2e-041
Identities = 12/28 (42%), Positives = 14/28 (50%)
Frame = +1 / +3
Query: 79 RPTRTSDGDQGHLLPVARIPAPRRRLSR 162
R R+S LLP P PRRR+ R
Sbjct: 15 RXKRSSKCHGQDLLPPRGAPRPRRRVPR 98
>gb|CK214575.1|CK214575 FGAS026503 Triticum aestivum FGAS: Library 6 CAP GATE 1 Triticum
aestivum cDNA, mRNA sequence
Length = 1105
Score = 167 bits (359), Expect(2) = 2e-041
Identities = 58/66 (87%), Positives = 59/66 (89%)
Frame = +2 / -3
Query: 242 NLNPWECSPKCGSRCSKTQYRKACLTLCNKCCAKCLCVPPGFYGNKGACPCYNNWKTKEG 421
NL PWECS KC SRCS TQY+KACLT CNKCCA CLCVPPG YGNKGACPCYNNWKTKEG
Sbjct: 473 NLKPWECSSKCSSRCSGTQYKKACLTYCNKCCATCLCVPPGTYGNKGACPCYNNWKTKEG 294
Query: 422 GPKCP* 439
GPKCP*
Sbjct: 293 GPKCP* 276
Score = 22.6 bits (43), Expect(2) = 2e-041
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = +1 / -2
Query: 88 RTSDGDQGHLLPVARIPAPRRRLSR 162
R+S LLP P PRRR+ R
Sbjct: 597 RSSKPHGQDLLPPRGAPRPRRRVPR 523
>gb|CK214574.1|CK214574 FGAS026502 Triticum aestivum FGAS: Library 6 CAP GATE 1 Triticum
aestivum cDNA, mRNA sequence
Length = 1094
Score = 167 bits (359), Expect(2) = 2e-041
Identities = 58/66 (87%), Positives = 59/66 (89%)
Frame = +2 / -1
Query: 242 NLNPWECSPKCGSRCSKTQYRKACLTLCNKCCAKCLCVPPGFYGNKGACPCYNNWKTKEG 421
NL PWECS KC SRCS TQY+KACLT CNKCCA CLCVPPG YGNKGACPCYNNWKTKEG
Sbjct: 476 NLKPWECSSKCSSRCSGTQYKKACLTYCNKCCATCLCVPPGTYGNKGACPCYNNWKTKEG 297
Query: 422 GPKCP* 439
GPKCP*
Sbjct: 296 GPKCP* 279
Score = 22.6 bits (43), Expect(2) = 2e-041
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = +1 / -3
Query: 88 RTSDGDQGHLLPVARIPAPRRRLSR 162
R+S LLP P PRRR+ R
Sbjct: 600 RSSKPHGQDLLPPRGAPRPRRRVPR 526
>gb|CN012436.1|CN012436 WHE3896_F09_K18ZS Wheat Fusarium graminearum infected spike cDNA
library Triticum aestivum cDNA clone WHE3896_F09_K18,
mRNA sequence
Length = 590
Score = 167 bits (359), Expect(2) = 2e-041
Identities = 58/66 (87%), Positives = 59/66 (89%)
Frame = +2 / +3
Query: 242 NLNPWECSPKCGSRCSKTQYRKACLTLCNKCCAKCLCVPPGFYGNKGACPCYNNWKTKEG 421
NL PWECS KC SRCS TQY+KACLT CNKCCA CLCVPPG YGNKGACPCYNNWKTKEG
Sbjct: 153 NLKPWECSSKCSSRCSGTQYKKACLTYCNKCCATCLCVPPGTYGNKGACPCYNNWKTKEG 332
Query: 422 GPKCP* 439
GPKCP*
Sbjct: 333 GPKCP* 350
Score = 22.6 bits (43), Expect(2) = 2e-041
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = +1 / +2
Query: 88 RTSDGDQGHLLPVARIPAPRRRLSR 162
R+S LLP P PRRR+ R
Sbjct: 29 RSSKPHGQDLLPPRGAPRPRRRVPR 103
>gb|CV766971.1|CV766971 FGAS061358 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 873
Score = 164 bits (353), Expect(2) = 2e-040
Identities = 57/65 (87%), Positives = 58/65 (89%)
Frame = +2 / +3
Query: 245 LNPWECSPKCGSRCSKTQYRKACLTLCNKCCAKCLCVPPGFYGNKGACPCYNNWKTKEGG 424
L PWECS KC SRCS TQY+KACLT CNKCCA CLCVPPG YGNKGACPCYNNWKTKEGG
Sbjct: 246 LKPWECSSKCSSRCSGTQYKKACLTYCNKCCATCLCVPPGTYGNKGACPCYNNWKTKEGG 425
Query: 425 PKCP* 439
PKCP*
Sbjct: 426 PKCP* 440
Score = 22.1 bits (42), Expect(2) = 2e-040
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = +1 / +2
Query: 115 LLPVARIPAPRRRLSR 162
LLP P PRRR+ R
Sbjct: 152 LLPPRGAPRPRRRVPR 199
>gb|AJ612828.1|AJ612828 AJ612828 Triticum turgidum subsp. durum etiolated seedling 20 day
Triticum turgidum subsp. durum cDNA clone 07666R, mRNA
sequence
Length = 676
Score = 164 bits (353), Expect(2) = 2e-040
Identities = 57/65 (87%), Positives = 58/65 (89%)
Frame = +2 / +2
Query: 245 LNPWECSPKCGSRCSKTQYRKACLTLCNKCCAKCLCVPPGFYGNKGACPCYNNWKTKEGG 424
L PWECS KC SRCS TQY+KACLT CNKCCA CLCVPPG YGNKGACPCYNNWKTKEGG
Sbjct: 158 LKPWECSSKCSSRCSGTQYKKACLTYCNKCCATCLCVPPGTYGNKGACPCYNNWKTKEGG 337
Query: 425 PKCP* 439
PKCP*
Sbjct: 338 PKCP* 352
Score = 22.1 bits (42), Expect(2) = 2e-040
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = +1 / +1
Query: 115 LLPVARIPAPRRRLSR 162
LLP P PRRR+ R
Sbjct: 64 LLPPRGAPRPRRRVPR 111
>gb|BQ838847.1|BQ838847 WHE3593_D05_H09ZS Wheat developing grains cDNA library Triticum
aestivum cDNA clone WHE3593_D05_H09, mRNA sequence
Length = 615
Score = 164 bits (353), Expect(2) = 2e-040
Identities = 57/65 (87%), Positives = 58/65 (89%)
Frame = +2 / +2
Query: 245 LNPWECSPKCGSRCSKTQYRKACLTLCNKCCAKCLCVPPGFYGNKGACPCYNNWKTKEGG 424
L PWECS KC SRCS TQY+KACLT CNKCCA CLCVPPG YGNKGACPCYNNWKTKEGG
Sbjct: 176 LKPWECSSKCSSRCSGTQYKKACLTYCNKCCATCLCVPPGTYGNKGACPCYNNWKTKEGG 355
Query: 425 PKCP* 439
PKCP*
Sbjct: 356 PKCP* 370
Score = 22.1 bits (42), Expect(2) = 2e-040
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = +1 / +1
Query: 115 LLPVARIPAPRRRLSR 162
LLP P PRRR+ R
Sbjct: 82 LLPPRGAPRPRRRVPR 129
>gb|CD898645.1|CD898645 G174.109K13F010824 G174 Triticum aestivum cDNA clone G174109K13,
mRNA sequence
Length = 580
Score = 164 bits (353), Expect(2) = 2e-040
Identities = 57/65 (87%), Positives = 58/65 (89%)
Frame = +2 / +2
Query: 245 LNPWECSPKCGSRCSKTQYRKACLTLCNKCCAKCLCVPPGFYGNKGACPCYNNWKTKEGG 424
L PWECS KC SRCS TQY+KACLT CNKCCA CLCVPPG YGNKGACPCYNNWKTKEGG
Sbjct: 293 LKPWECSSKCSSRCSGTQYKKACLTYCNKCCATCLCVPPGTYGNKGACPCYNNWKTKEGG 472
Query: 425 PKCP* 439
PKCP*
Sbjct: 473 PKCP* 487
Score = 22.1 bits (42), Expect(2) = 2e-040
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = +1 / +1
Query: 115 LLPVARIPAPRRRLSR 162
LLP P PRRR+ R
Sbjct: 199 LLPPRGAPRPRRRVPR 246
>gb|BJ310404.1|BJ310404 BJ310404 Y. Ogihara unpublished cDNA library, Wh_yd Triticum
aestivum cDNA clone whyd7b02 3', mRNA sequence
Length = 515
Score = 164 bits (353), Expect(2) = 2e-040
Identities = 57/65 (87%), Positives = 58/65 (89%)
Frame = +2 / -3
Query: 245 LNPWECSPKCGSRCSKTQYRKACLTLCNKCCAKCLCVPPGFYGNKGACPCYNNWKTKEGG 424
L PWECS KC SRCS TQY+KACLT CNKCCA CLCVPPG YGNKGACPCYNNWKTKEGG
Sbjct: 402 LKPWECSSKCSSRCSGTQYKKACLTYCNKCCATCLCVPPGTYGNKGACPCYNNWKTKEGG 223
Query: 425 PKCP* 439
PKCP*
Sbjct: 222 PKCP* 208
Score = 22.1 bits (42), Expect(2) = 2e-040
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = +1 / -1
Query: 115 LLPVARIPAPRRRLSR 162
LLP P PRRR+ R
Sbjct: 497 LLPPRGAPRPRRRVPR 450
>gb|CD890425.1|CD890425 G118.114J21F010717 G118 Triticum aestivum cDNA clone G118114J21,
mRNA sequence
Length = 664
Score = 162 bits (348), Expect(2) = 4e-040
Identities = 56/65 (86%), Positives = 57/65 (87%)
Frame = +2 / +1
Query: 245 LNPWECSPKCGSRCSKTQYRKACLTLCNKCCAKCLCVPPGFYGNKGACPCYNNWKTKEGG 424
L PWEC KC SRCS TQY+KACLT CNKCCA CLCVPPG YGNKGACPCYNNWKTKEGG
Sbjct: 157 LKPWECPSKCSSRCSGTQYKKACLTYCNKCCATCLCVPPGTYGNKGACPCYNNWKTKEGG 336
Query: 425 PKCP* 439
PKCP*
Sbjct: 337 PKCP* 351
Score = 23.5 bits (45), Expect(2) = 4e-040
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = +1 / +3
Query: 115 LLPVARIPAPRRRLSR 162
LLP+ P PRRR+ R
Sbjct: 78 LLPLRGAPRPRRRVPR 125
>gb|BF474214.1|BF474214 WHE0841_D12_G23ZS Wheat vernalized crown cDNA library Triticum
aestivum cDNA clone WHE0841_D12_G23, mRNA sequence
Length = 427
Score = 164 bits (353), Expect = 8e-040
Identities = 57/65 (87%), Positives = 58/65 (89%)
Frame = +2 / +1
Query: 245 LNPWECSPKCGSRCSKTQYRKACLTLCNKCCAKCLCVPPGFYGNKGACPCYNNWKTKEGG 424
L PWECS KC SRCS TQY+KACLT CNKCCA CLCVPPG YGNKGACPCYNNWKTKEGG
Sbjct: 94 LKPWECSSKCSSRCSGTQYKKACLTYCNKCCATCLCVPPGTYGNKGACPCYNNWKTKEGG 273
Query: 425 PKCP* 439
PKCP*
Sbjct: 274 PKCP* 288
>gb|AL808362.1|AL808362 AL808362 a:22 Triticum aestivum cDNA clone G11_a22_plate_15, mRNA
sequence
Length = 468
Score = 164 bits (353), Expect = 8e-040
Identities = 57/65 (87%), Positives = 58/65 (89%)
Frame = +2 / +2
Query: 245 LNPWECSPKCGSRCSKTQYRKACLTLCNKCCAKCLCVPPGFYGNKGACPCYNNWKTKEGG 424
L PWECS KC SRCS TQY+KACLT CNKCCA CLCVPPG YGNKGACPCYNNWKTKEGG
Sbjct: 137 LKPWECSSKCSSRCSGTQYKKACLTYCNKCCATCLCVPPGTYGNKGACPCYNNWKTKEGG 316
Query: 425 PKCP* 439
PKCP*
Sbjct: 317 PKCP* 331
>emb|AX406849.1| Sequence 10 from Patent WO0222821
Length = 594
Score = 164 bits (353), Expect = 8e-040
Identities = 57/65 (87%), Positives = 58/65 (89%)
Frame = +2 / +3
Query: 245 LNPWECSPKCGSRCSKTQYRKACLTLCNKCCAKCLCVPPGFYGNKGACPCYNNWKTKEGG 424
L PWECS KC SRCS TQY+KACLT CNKCCA CLCVPPG YGNKGACPCYNNWKTKEGG
Sbjct: 150 LKPWECSSKCSSRCSGTQYKKACLTYCNKCCATCLCVPPGTYGNKGACPCYNNWKTKEGG 329
Query: 425 PKCP* 439
PKCP*
Sbjct: 330 PKCP* 344
>gb|CK153563.1|CK153563 FGAS032195 Triticum aestivum FGAS: TaLt2 Triticum aestivum cDNA,
mRNA sequence
Length = 869
Score = 162 bits (348), Expect = 4e-039
Identities = 56/65 (86%), Positives = 57/65 (87%)
Frame = +2 / -3
Query: 245 LNPWECSPKCGSRCSKTQYRKACLTLCNKCCAKCLCVPPGFYGNKGACPCYNNWKTKEGG 424
L PWEC KC SRCS TQY+KACLT CNKCCA CLCVPPG YGNKGACPCYNNWKTKEGG
Sbjct: 675 LKPWECPSKCSSRCSGTQYKKACLTYCNKCCATCLCVPPGTYGNKGACPCYNNWKTKEGG 496
Query: 425 PKCP* 439
PKCP*
Sbjct: 495 PKCP* 481
>gb|CK214484.1|CK214484 FGAS026409 Triticum aestivum FGAS: Library 6 CAP GATE 1 Triticum
aestivum cDNA, mRNA sequence
Length = 1076
Score = 160 bits (343), Expect(2) = 4e-039
Identities = 55/65 (84%), Positives = 56/65 (86%)
Frame = +2 / -2
Query: 245 LNPWECSPKCGSRCSKTQYRKACLTLCNKCCAKCLCVPPGFYGNKGACPCYNNWKTKEGG 424
L PWECS KC SRCS TQY+KACLT CN CC CLCVPPG YGNKGACPCYNNWKTKEGG
Sbjct: 388 LKPWECSSKCSSRCSGTQYKKACLTYCNNCCPTCLCVPPGTYGNKGACPCYNNWKTKEGG 209
Query: 425 PKCP* 439
PKCP*
Sbjct: 208 PKCP* 194
Score = 22.1 bits (42), Expect(2) = 4e-039
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = +1 / -1
Query: 115 LLPVARIPAPRRRLSR 162
LLP P PRRR+ R
Sbjct: 482 LLPPRGAPRPRRRVPR 435
>gb|CD895503.1|CD895503 G174.100A09F010705 G174 Triticum aestivum cDNA clone G174100A09,
mRNA sequence
Length = 578
Score = 121 bits (258), Expect(3) = 4e-033
Identities = 41/46 (89%), Positives = 42/46 (91%)
Frame = +2 / +1
Query: 302 RKACLTLCNKCCAKCLCVPPGFYGNKGACPCYNNWKTKEGGPKCP* 439
R+ CLT CNKCCA CLCVPPG YGNKGACPCYNNWKTKEGGPKCP*
Sbjct: 220 RRLCLTYCNKCCATCLCVPPGTYGNKGACPCYNNWKTKEGGPKCP* 357
Score = 36.8 bits (74), Expect(3) = 4e-033
Identities = 16/23 (69%), Positives = 19/23 (82%)
Frame = +1 / +2
Query: 241 QPESLGVLAQVRVAVLQDAVQEG 309
Q +++GVL QV VAVL DAVQEG
Sbjct: 158 QAQAMGVLVQVLVAVLGDAVQEG 226
Score = 22.1 bits (42), Expect(3) = 4e-033
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = +1 / +1
Query: 115 LLPVARIPAPRRRLSR 162
LLP P PRRR+ R
Sbjct: 64 LLPPRGAPRPRRRVPR 111
>gb|CA725087.1|CA725087 wds3f.pk003.n19 wds3f Triticum aestivum cDNA clone wds3f.pk003.n19
5' end, mRNA sequence
Length = 569
Score = 128 bits (274), Expect(2) = 1e-029
Identities = 44/55 (80%), Positives = 46/55 (83%)
Frame = +2 / +2
Query: 245 LNPWECSPKCGSRCSKTQYRKACLTLCNKCCAKCLCVPPGFYGNKGACPCYNNWK 409
L PWECS KC SRCS TQY+KACLT C KCCA CLCVPPG YGNKGA PCYNNW+
Sbjct: 158 LKPWECSSKCSSRCSGTQYKKACLTYCXKCCATCLCVPPGNYGNKGAWPCYNNWE 322
Score = 22.1 bits (42), Expect(2) = 1e-029
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = +1 / +1
Query: 115 LLPVARIPAPRRRLSR 162
LLP P PRRR+ R
Sbjct: 64 LLPPRGAPRPRRRVPR 111
>gb|BF484849.1|BF484849 WHE2320_D02_H04ZS Wheat pre-anthesis spike cDNA library Triticum
aestivum cDNA clone WHE2320_D02_H04, mRNA sequence
Length = 414
Score = 123 bits (264), Expect = 1e-027
Identities = 43/48 (89%), Positives = 44/48 (91%)
Frame = +2 / -3
Query: 296 QYRKACLTLCNKCCAKCLCVPPGFYGNKGACPCYNNWKTKEGGPKCP* 439
QY+KACLT CNKCCA CL VPPG YGNKGACPCYNNWKTKEGGPKCP*
Sbjct: 406 QYKKACLTYCNKCCATCLWVPPGTYGNKGACPCYNNWKTKEGGPKCP* 263
>gb|BJ214671.1|BJ214671 BJ214671 Y. Ogihara unpublished cDNA library, Wh Triticum aestivum
cDNA clone wh3i16 3', mRNA sequence
Length = 350
Score = 110 bits (235), Expect = 1e-023
Identities = 37/39 (94%), Positives = 37/39 (94%)
Frame = +2 / -2
Query: 323 CNKCCAKCLCVPPGFYGNKGACPCYNNWKTKEGGPKCP* 439
CNKCCA CLCVPPG YGNKGACPCYNNWKTKEGGPKCP*
Sbjct: 346 CNKCCATCLCVPPGTYGNKGACPCYNNWKTKEGGPKCP* 230
>gb|CA616999.1|CA616999 wl1n.pk0010.f7 wl1n Triticum aestivum cDNA clone wl1n.pk0010.f7 5'
end, mRNA sequence
Length = 217
Score = 48.7 bits (100), Expect(3) = 6e-022
Identities = 17/17 (100%), Positives = 17/17 (100%)
Frame = +2 / +1
Query: 287 SKTQYRKACLTLCNKCC 337
SKTQYRKACLTLCNKCC
Sbjct: 166 SKTQYRKACLTLCNKCC 216
Score = 47.3 bits (97), Expect(3) = 6e-022
Identities = 20/22 (90%), Positives = 20/22 (90%)
Frame = +1 / +1
Query: 127 ARIPAPRRRLSRVCSAAAGEEG 192
ARI APRRR SRVCSAAAGEEG
Sbjct: 4 ARIRAPRRRFSRVCSAAAGEEG 69
Score = 43.7 bits (89), Expect(3) = 6e-022
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = +2 / +2
Query: 242 NLNPWECSPKCGSRCSK 292
NLNPWECS KCGSRC +
Sbjct: 122 NLNPWECSXKCGSRCPR 172
Database: Triticum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 3:01 PM
Number of letters in database: 367,240,239
Number of sequences in database: 636,343
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 500,248,592
Number of Sequences: 636343
Number of extensions: 7426713
Number of successful extensions: 125510
Number of sequences better than 1.0e-020: 36
length of database: 122,413,413
effective HSP length: 53
effective length of database: 88,687,234
effective search space used: 14544706376
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)