TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= QCH22b04.yg.2.1
(457 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CW104740.1|CW104740 104_474_11012593_116_34450_015 Sorgh... 182 1e-080
gb|CW351643.1|CW351643 fsbb001f013h21f0 Sorghum methylation... 255 2e-067
gb|CW310537.1|CW310537 104_799_11469765_148_37433_083 Sorgh... 246 2e-064
gb|CN147606.1|CN147606 WOUND1_50_F12.g1_A002 Wounded leaves... 238 3e-062
gb|CW404558.1|CW404558 fsbb001f096m02f0 Sorghum methylation... 232 3e-060
gb|CF489474.1|CF489474 POL1_57_F11.g1_A002 Pollen Sorghum b... 229 2e-059
gb|CW360973.1|CW360973 fsbb001f029e24f0 Sorghum methylation... 204 5e-058
gb|CW360974.1|CW360974 fsbb001f029e24k0 Sorghum methylation... 204 5e-052
gb|CW245415.1|CW245415 104_706_11220993_116_35080_041 Sorgh... 181 5e-045
gb|BM326604.1|BM326604 PIC1_59_C05.b1_A002 Pathogen-infecte... 180 1e-044
gb|BI141662.1|BI141662 IP1_55_D04.b1_A002 Immature pannicle... 168 4e-041
gb|CW384339.1|CW384339 fsbb001f067f05k0 Sorghum methylation... 100 2e-040
gb|CW041215.1|CW041215 104_274_10506451_114_30469 Sorghum m... 166 3e-040
gb|CW192580.1|CW192580 104_615_11179105_148_36770_013 Sorgh... 165 3e-040
gb|CW280288.1|CW280288 104_755_11407540_148_35446_008 Sorgh... 165 3e-040
gb|CW406139.1|CW406139 fsbb001f099a08k0 Sorghum methylation... 165 3e-040
gb|CW418076.1|CW418076 fsbb001f121g03f0 Sorghum methylation... 165 3e-040
gb|CW384690.1|CW384690 fsbb001f067n05k0 Sorghum methylation... 96 6e-040
gb|CW270918.1|CW270918 104_742_11402708_148_35335_066 Sorgh... 157 8e-038
gb|CW302164.1|CW302164 104_786_11464579_148_35666_076 Sorgh... 156 1e-037
gb|CL151421.1|CL151421 104_334_10779234_116_31362_018 Sorgh... 152 3e-036
gb|CW176243.1|CW176243 104_589_11158384_116_36585_062 Sorgh... 150 9e-036
gb|CD236213.1|CD236213 SS1_32_H04.g1_A012 Salt-stressed see... 141 5e-033
gb|CW169384.1|CW169384 104_579_11154645_148_36500_089 Sorgh... 137 1e-031
gb|CW345643.1|CW345643 104_848_11488604_116_36212_068 Sorgh... 137 1e-031
gb|CW345644.1|CW345644 104_848_11488604_148_36211_068 Sorgh... 137 1e-031
gb|CW041216.1|CW041216 104_274_10506451_116_30433 Sorghum m... 136 2e-031
gb|CW310536.1|CW310536 104_799_11469765_116_37434_083 Sorgh... 133 2e-030
gb|CW467993.1|CW467993 fsbb001f219o18f0 Sorghum methylation... 94 2e-029
gb|CW071957.1|CW071957 104_324_10591975_116_30462 Sorghum m... 127 7e-029
gb|CW184959.1|CW184959 104_602_11165812_116_36692_008 Sorgh... 127 1e-028
gb|CF428102.1|CF428102 PH1_12_H12.g1_A002 Phosphorous-defic... 125 3e-028
gb|CW343533.1|CW343533 104_845_11487471_116_36181_050 Sorgh... 119 2e-026
gb|CW180308.1|CW180308 104_594_11160567_148_36632_052 Sorgh... 87 4e-025
gb|CW041218.1|CW041218 104_274_10506451_116_30481 Sorghum m... 114 7e-025
gb|BZ334670.1|BZ334670 hx80g11.b1 WGS-SbicolorF (JM107 adap... 113 2e-024
gb|BM324737.1|BM324737 PIC1_35_A07.b1_A002 Pathogen-infecte... 113 2e-024
gb|BM325667.1|BM325667 PIC1_47_C12.b1_A002 Pathogen-infecte... 113 2e-024
gb|CF427451.1|CF427451 PH1_1_F03.g1_A002 Phosphorous-defici... 113 2e-024
gb|CW311718.1|CW311718 104_801_11470377_148_36278_041 Sorgh... 106 2e-022
>gb|CW104740.1|CW104740 104_474_11012593_116_34450_015 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11012593, DNA
sequence
Length = 708
Score = 182 bits (393), Expect(2) = 1e-080
Identities = 73/85 (85%), Positives = 79/85 (92%)
Frame = +1 / -1
Query: 4 RSYFAMKVMDKTSLASRKKLLRAQTEREILQSLDHPFLPTLYTHFETDKFSCLVMEFCPG 183
+SYFAMKVMDK SLAS KKLLRAQTE+EILQ LDHPFLPTLYTHFETDKFSCLVMEFCPG
Sbjct: 693 KSYFAMKVMDKASLASXKKLLRAQTEKEILQCLDHPFLPTLYTHFETDKFSCLVMEFCPG 514
Query: 184 GDLHTLRQRQPGKYFSEQAAKFYVA 258
GDLHTLRQRQPGK+F EQA K+ ++
Sbjct: 513 GDLHTLRQRQPGKHFPEQAVKYVLS 439
Score = 138 bits (297), Expect(2) = 1e-080
Identities = 56/69 (81%), Positives = 66/69 (95%)
Frame = +1 / -1
Query: 244 KFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCSVSLTVIKSANP 423
+FY+AEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRC+VS T+IKS+NP
Sbjct: 294 RFYIAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTLIKSSNP 115
Query: 424 GLDAMQRNN 450
+A+++N+
Sbjct: 114 DAEALRKNS 88
Score = 113 bits (241), Expect(2) = 3e-048
Identities = 50/68 (73%), Positives = 57/68 (83%)
Frame = -3 / +2
Query: 449 LFLCIASRPGFADLITVRLTEQRRDRSKSDSMMWPSSRTRTFSGLRSRYIIPSICRYSNA 270
LF AS GF DLI+V LT QRR+RSKS+SMM PSSRTRTFSGLRSRY+IPS+C+YS+A
Sbjct: 89 LFFLSASASGFEDLISVGLTAQRRERSKSESMMCPSSRTRTFSGLRSRYMIPSMCKYSSA 268
Query: 269 RSTSAT*N 246
R TSA *N
Sbjct: 269 RRTSAM*N 292
Score = 100 bits (213), Expect(2) = 3e-048
Identities = 49/78 (62%), Positives = 52/78 (66%)
Frame = -3 / +2
Query: 239 ACSEKYFPGCLWRRV*RSPPGQNSITKHENLSVSK*VYRVGRNGWSRDCXXXXXXXXXXX 60
ACS K PGCL RRV*RSPPGQNSIT+ ENLSVSK*V VGR G SR C
Sbjct: 458 ACSGKCLPGCLCRRV*RSPPGQNSITRQENLSVSK*V*SVGRKG*SRHCKISFSV*ARSN 637
Query: 59 XXRLAKEVLSITFMAK*L 6
LA + LSITF+AK*L
Sbjct: 638 FLXLASDALSITFIAK*L 691
Score = 89.0 bits (188), Expect(2) = 3e-031
Identities = 42/76 (55%), Positives = 55/76 (72%)
Frame = -2 / +1
Query: 237 LL*KIFSRLPLAKSVKIPSRAEFHNQA*KLVCLKVSIQGW*KWMVQGLQDLPLGLSSKQL 58
LL K+F+RLPL+KSVK+ SRAE HN A +L+ LKVS++ + M+Q LQ+L L LSSKQL
Sbjct: 460 LLWKVFARLPLSKSVKVSSRAELHN*AGELIGLKVSVKCRKEGMIQALQNLLLCLSSKQL 639
Query: 57 LPTCQRSLIHNLHGKV 10
C L+HN H K+
Sbjct: 640 FTAC**CLVHNFHRKI 687
Score = 86.3 bits (182), Expect(2) = 1e-029
Identities = 40/81 (49%), Positives = 52/81 (64%)
Frame = +3 / -3
Query: 6 ELLCHEGYG*DFFGKSEEAASSSDRAGDPAVPGPSISTNPVYSL*DRQVFMLGYGILPWR 185
EL C E YG K + ASSS+R GD A+PG S+ + ++SL*DR V + YG+LP R
Sbjct: 691 ELFCDESYGQGITSKX*KVASSSNREGDFAMPGSSLPSYTLHSL*DR*VLLPSYGVLPGR 512
Query: 186 GSSHSSPKAAWKIFFRASSKV 248
SHSS +AAW+ RAS +V
Sbjct: 511 RPSHSSTEAAWQTLSRASCQV 449
Score = 77.6 bits (163), Expect(2) = 1e-026
Identities = 39/78 (50%), Positives = 46/78 (58%)
Frame = +2 / -2
Query: 14 LP*RLWIRLLWQVGRSCFELRPSGRSCSPWTIHFYQPCILTLRQTSFHAWLWNSALEGIF 193
L *+LW R Q +SCFEL+ R C+ W I + LTLR S A LW+SA E F
Sbjct: 683 LR*KLWTRHH*QAVKSCFELKQRRRFCNAWIIPSFLHFTLTLRPISSPA*LWSSAREETF 504
Query: 194 TLFAKGSLENIFQSKQQS 247
TLF +GSL N FQSK S
Sbjct: 503 TLFDRGSLANTFQSKLSS 450
Score = 68.0 bits (142), Expect(2) = 3e-031
Identities = 30/63 (47%), Positives = 40/63 (63%)
Frame = -2 / +1
Query: 435 CI*ARICGLDHR*AH*TAKR*IEVRQHDVAIFPNEDILWFKITVYNPKHMQVFQCKEHLS 256
C R+ G + TAK +EV +HDV I PN+DI +ITVY+ KH+QVF C+E S
Sbjct: 103 CFCIRV*GFNQCWTDCTAKGEVEV*EHDVPILPNKDIFRLEITVYDTKHVQVF*CQEDFS 282
Query: 255 YIE 247
Y+E
Sbjct: 283 YVE 291
Score = 65.2 bits (136), Expect(2) = 1e-029
Identities = 33/64 (51%), Positives = 39/64 (60%)
Frame = +2 / -2
Query: 233 SKQQSSM*LRCSLHWNTCICLGLYTVILNQRMSSFGKMATSCCRTSIYLFAVQ*A*R*SS 412
S S *L+ S H NTC CL YTVI + +MS FG+M TSC +TS FAVQ * +
Sbjct: 305 SHDADST*LKSSWH*NTCTCLVSYTVISSLKMSLFGRMGTSCSQTSTSPFAVQSVQH*LN 126
Query: 413 PQIL 424
PQ L
Sbjct: 125 PQTL 114
Score = 63.4 bits (132), Expect(2) = 1e-026
Identities = 32/69 (46%), Positives = 41/69 (59%)
Frame = +3 / -3
Query: 243 KVLCS*GAPCIGIPAYAWDYIP*S*TRECPRSGRWPHHAVGLRSISSLFSEPNGDQVRKS 422
++L S* P I A+AW +IP*S +CP SG W HHA+ LR + SL S+ N D + K
Sbjct: 295 QILHS*SPPGTRILAHAWYHIP*SQA*KCPCSGGWAHHALRLRPLPSLCSQSNTD*ILKP 116
Query: 423 WPRCNAEEQ 449
R EEQ
Sbjct: 115 *CRSTQEEQ 89
>gb|CW351643.1|CW351643 fsbb001f013h21f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f013h21, DNA
sequence
Length = 546
Score = 255 bits (552), Expect = 2e-067
Identities = 104/141 (73%), Positives = 122/141 (86%)
Frame = +1 / -3
Query: 13 FAMKVMDKTSLASRKKLLRAQTEREILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDL 192
FAMKVMDK +LA R KL RA+TEREIL LDHPFLPTLY+HF+T KF CL+ME+C GG+L
Sbjct: 490 FAMKVMDKGTLAGRNKLARAETEREILGLLDHPFLPTLYSHFQTHKFCCLLMEYCCGGNL 311
Query: 193 HTLRQRQPGKYFSEQAAKFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFD 372
H+LRQRQPGK F+E AA+FY EVLLALEYLHMLG++YRDLKPENVLVRE+GHIMLSDFD
Sbjct: 310 HSLRQRQPGKRFAEDAARFYACEVLLALEYLHMLGVVYRDLKPENVLVREEGHIMLSDFD 131
Query: 373 LSLRCSVSLTVIKSANPGLDA 435
LSLRCSVS +++S + + A
Sbjct: 130 LSLRCSVSPALVRSPSGRVSA 68
Score = 138 bits (296), Expect = 5e-032
Identities = 63/98 (64%), Positives = 70/98 (71%)
Frame = -3 / +3
Query: 395 LTEQRRDRSKSDSMMWPSSRTRTFSGLRSRYIIPSICRYSNARSTSAT*NFAACSEKYFP 216
LTEQR +RSKS+SMM PSS T TFSGLRSRY PS+CRYS+A STS *N AA S K P
Sbjct: 108 LTEQRSERSKSESMMCPSSLTSTFSGLRSRYTTPSMCRYSSASSTSQA*NLAASSAKRLP 287
Query: 215 GCLWRRV*RSPPGQNSITKHENLSVSK*VYRVGRNGWS 102
GC WRR R PP Q S+ + +NL V K VGRNGWS
Sbjct: 288 GCRWRREWRLPPQQYSMRRQQNLWVWKWE*SVGRNGWS 401
Score = 110 bits (234), Expect = 2e-023
Identities = 51/134 (38%), Positives = 87/134 (64%)
Frame = -2 / +2
Query: 414 GLDHR*AH*TAKR*IEVRQHDVAIFPNEDILWFKITVYNPKHMQVFQCKEHLSYIELCCL 235
G D R A A+R +EV +HDV+ P+E +L ++ V++ +H+QV + K+HL+ +E +
Sbjct: 89 GADKRRADGAAEREVEVGEHDVSFLPDEHVLGLEVPVHDAEHVQVLERKQHLAGVEPGGV 268
Query: 234 L*KIFSRLPLAKSVKIPSRAEFHNQA*KLVCLKVSIQGW*KWMVQGLQDLPLGLSSKQLL 55
L + + LPLA+ V++ + A H +A +LV L+V ++ + +VQ QDLPL L + QL+
Sbjct: 269 LGEALAGLPLAEGVEVAAAAVLHEEAAELVGLEVGVERGQERVVQQAQDLPLRLRAGQLV 448
Query: 54 PTCQRSLIHNLHGK 13
Q +L+H+LHG+
Sbjct: 449 AARQGALVHHLHGE 490
>gb|CW310537.1|CW310537 104_799_11469765_148_37433_083 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11469765, DNA
sequence
Length = 653
Score = 246 bits (531), Expect = 2e-064
Identities = 98/121 (80%), Positives = 113/121 (93%)
Frame = +1 / +1
Query: 58 KLLRAQTEREILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQ 237
K+ RAQTEREIL LDHPFLPTLYTHFETDKF CLVME+C GG+LH+LRQ+QPGK+F+E
Sbjct: 1 KMARAQTEREILGLLDHPFLPTLYTHFETDKFYCLVMEYCSGGNLHSLRQKQPGKHFTEP 180
Query: 238 AAKFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCSVSLTVIKSA 417
AA+FYVAEVLLA+EYLHMLGI+YRDLKPENVLVREDGHIMLSDFDLSLRC+V T++KS+
Sbjct: 181 AARFYVAEVLLAMEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLSLRCTVCPTLVKSS 360
Query: 418 N 420
+
Sbjct: 361 S 363
Score = 155 bits (333), Expect = 4e-037
Identities = 72/105 (68%), Positives = 77/105 (73%)
Frame = -3 / -1
Query: 413 DLITVRLTEQRRDRSKSDSMMWPSSRTRTFSGLRSRYIIPSICRYSNARSTSAT*NFAAC 234
DL +V T QR DRSKS+SMMWPSSRT TFSGLRS Y IPS+CRYS A STSAT*N AA
Sbjct: 356 DLTSVGHTVQRSDRSKSESMMWPSSRTSTFSGLRSLYTIPSMCRYSMASSTSAT*NLAAG 177
Query: 233 SEKYFPGCLWRRV*RSPPGQNSITKHENLSVSK*VYRVGRNGWSR 99
S K PGC WR R PP Q S+T+ NLSVSK V VGR GWSR
Sbjct: 176 SVKCLPGCFWRSEWRLPPLQYSMTRQ*NLSVSKCV*SVGRKGWSR 42
>gb|CN147606.1|CN147606 WOUND1_50_F12.g1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_50_F12_A002 5', mRNA sequence
Length = 818
Score = 238 bits (515), Expect = 3e-062
Identities = 95/118 (80%), Positives = 106/118 (89%)
Frame = +1 / +1
Query: 67 RAQTEREILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAAK 246
RAQ EREIL+ LDHPFLPTLY HF TD SCLVME+CPGGDLH LRQRQPGK F E AA+
Sbjct: 10 RAQAEREILEMLDHPFLPTLYAHFTTDNLSCLVMEYCPGGDLHVLRQRQPGKSFPEPAAR 189
Query: 247 FYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCSVSLTVIKSAN 420
FYVAEVLLALEYLHMLG+IYRDLKPEN+LVREDGHIMLSDFDLSLRCSV+ +++S++
Sbjct: 190 FYVAEVLLALEYLHMLGVIYRDLKPENILVREDGHIMLSDFDLSLRCSVNPVLLRSSS 363
Score = 139 bits (298), Expect = 3e-032
Identities = 64/95 (67%), Positives = 72/95 (75%)
Frame = -3 / -1
Query: 392 TEQRRDRSKSDSMMWPSSRTRTFSGLRSRYIIPSICRYSNARSTSAT*NFAACSEKYFPG 213
TE +RSKSD+++ PSSRTR FSG RSRY+ PS+ RYS AR TSAT*N AA S K FPG
Sbjct: 335 TEHLSERSKSDNIICPSSRTRMFSGFRSRYMTPSM*RYSKARRTSAT*NLAAGSGKLFPG 156
Query: 212 CLWRRV*RSPPGQNSITKHENLSVSK*VYRVGRNG 108
CL RR +SPPGQ S+TKHE LSV K RVGRNG
Sbjct: 155 CL*RRTCKSPPGQYSMTKHERLSVVKWA*RVGRNG 51
>gb|CW404558.1|CW404558 fsbb001f096m02f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f096m02, DNA
sequence
Length = 443
Score = 232 bits (500), Expect = 3e-060
Identities = 93/126 (73%), Positives = 110/126 (87%)
Frame = +1 / -1
Query: 58 KLLRAQTEREILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQ 237
KL RA+TEREIL LDHPFLPTLY+HF+T KF CL+ME+C GG+LH+LRQRQPGK F+E
Sbjct: 440 KLARAETEREILGLLDHPFLPTLYSHFQTHKFCCLLMEYCCGGNLHSLRQRQPGKRFAED 261
Query: 238 AAKFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCSVSLTVIKSA 417
AA+FY EVLLALEYLHMLG++YRDLKPENVLVRE+GHIMLSDFDLSLRCSVS +++S
Sbjct: 260 AARFYACEVLLALEYLHMLGVVYRDLKPENVLVREEGHIMLSDFDLSLRCSVSPALVRSP 81
Query: 418 NPGLDA 435
+ + A
Sbjct: 80 SGRVSA 63
Score = 138 bits (296), Expect = 5e-032
Identities = 63/98 (64%), Positives = 70/98 (71%)
Frame = -3 / +1
Query: 395 LTEQRRDRSKSDSMMWPSSRTRTFSGLRSRYIIPSICRYSNARSTSAT*NFAACSEKYFP 216
LTEQR +RSKS+SMM PSS T TFSGLRSRY PS+CRYS+A STS *N AA S K P
Sbjct: 103 LTEQRSERSKSESMMCPSSLTSTFSGLRSRYTTPSMCRYSSASSTSQA*NLAASSAKRLP 282
Query: 215 GCLWRRV*RSPPGQNSITKHENLSVSK*VYRVGRNGWS 102
GC WRR R PP Q S+ + +NL V K VGRNGWS
Sbjct: 283 GCRWRREWRLPPQQYSMRRQQNLWVWKWE*SVGRNGWS 396
>gb|CF489474.1|CF489474 POL1_57_F11.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_57_F11_A002 5', mRNA sequence
Length = 794
Score = 229 bits (495), Expect = 2e-059
Identities = 92/104 (88%), Positives = 99/104 (95%)
Frame = +1 / +1
Query: 1 TRSYFAMKVMDKTSLASRKKLLRAQTEREILQSLDHPFLPTLYTHFETDKFSCLVMEFCP 180
T+SYFAMKVMDK SLASRKKLLR+QTE++ILQ LDHPFLPTLYTHFETDKFSCLVMEFCP
Sbjct: 481 TKSYFAMKVMDKASLASRKKLLRSQTEKDILQCLDHPFLPTLYTHFETDKFSCLVMEFCP 660
Query: 181 GGDLHTLRQRQPGKYFSEQAAKFYVAEVLLALEYLHMLGIIYRD 312
GGD+HTLRQRQ GKYF EQA KFYV+E+LLALEYLHMLGIIYRD
Sbjct: 661 GGDMHTLRQRQRGKYFPEQAVKFYVSEILLALEYLHMLGIIYRD 792
Score = 145 bits (312), Expect = 3e-034
Identities = 67/103 (65%), Positives = 73/103 (70%)
Frame = -3 / -1
Query: 314 RSRYIIPSICRYSNARSTSAT*NFAACSEKYFPGCLWRRV*RSPPGQNSITKHENLSVSK 135
RSRY+IPS+CRYSNAR S T*N ACS KY P CL RRV SPPGQNSIT+HENLSVSK
Sbjct: 794 RSRYMIPSMCRYSNARRISDT*NLTACSGKYLPRCLCRRVCMSPPGQNSITRHENLSVSK 615
Query: 134 *VYRVGRNGWSRDCXXXXXXXXXXXXXRLAKEVLSITFMAK*L 6
VY VGRNG SR C RLA + LS+TF+AK*L
Sbjct: 614 WVYNVGRNG*SRHCKMSFSVWDRSNFLRLASDALSMTFIAK*L 486
Score = 112 bits (240), Expect = 3e-024
Identities = 48/104 (46%), Positives = 68/104 (65%)
Frame = -2 / -3
Query: 312 ITVYNPKHMQVFQCKEHLSYIELCCLL*KIFSRLPLAKSVKIPSRAEFHNQA*KLVCLKV 133
I +Y+ +H+QV QC E+ YIE L KI + LPL++ + + SR + HNQ *K + LKV
Sbjct: 792 IPIYDTEHVQVLQC*ENFRYIEFDRLFWKILATLPLSQGMHVSSRTKLHNQT*KFIGLKV 613
Query: 132 SIQGW*KWMVQGLQDLPLGLSSKQLLPTCQRSLIHNLHGKVTPC 1
IQ +W++Q LQD+ L KQLL TC+ L+H+LH K+T C
Sbjct: 612 GIQCRKEWVIQALQDVLFSLGPKQLLTTCK*CLVHDLHCKITLC 481
Score = 107 bits (228), Expect = 1e-022
Identities = 47/96 (48%), Positives = 62/96 (64%)
Frame = +3 / +3
Query: 6 ELLCHEGYG*DFFGKSEEAASSSDRAGDPAVPGPSISTNPVYSL*DRQVFMLGYGILPWR 185
EL C+EG+G KS E AS D G AVPG I + VY L*DR +FM GYG+L WR
Sbjct: 486 ELFCNEGHGQGITCKS*EVASVPD*KGHLAVPGSPIPSYIVYPL*DR*IFMSGYGVLSWR 665
Query: 186 GSSHSSPKAAWKIFFRASSKVLCS*GAPCIGIPAYA 293
++ + KA W++F R S ++LC * +P IG+PA+A
Sbjct: 666 RHAYPATKATWQVFSRTSGQILCI*NSPSIGVPAHA 773
Score = 101 bits (216), Expect = 5e-021
Identities = 45/95 (47%), Positives = 56/95 (58%)
Frame = +2 / +2
Query: 8 VTLP*RLWIRLLWQVGRSCFELRPSGRSCSPWTIHFYQPCILTLRQTSFHAWLWNSALEG 187
V L *R W R QV RSCF R SCS W H + CI TLR +FH WLW+ LE
Sbjct: 488 VILQ*RSWTRHHLQVVRSCFGPRLKRTSCSAWITHSFLHCIPTLRPINFHVWLWSFVLEE 667
Query: 188 IFTLFAKGSLENIFQSKQQSSM*LRCSLHWNTCIC 292
KG++ +IFQ+K+ +SM L+ S HW+TC C
Sbjct: 668 TCIPCDKGNVASIFQNKRSNSMYLKFS*HWSTCTC 772
>gb|CW360973.1|CW360973 fsbb001f029e24f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f029e24, DNA
sequence
Length = 835
Score = 204 bits (441), Expect = 5e-052
Identities = 83/95 (87%), Positives = 90/95 (94%)
Frame = +1 / -2
Query: 1 TRSYFAMKVMDKTSLASRKKLLRAQTEREILQSLDHPFLPTLYTHFETDKFSCLVMEFCP 180
TRSYFAMKVMDKTSLASRKKLLRAQTEREILQSLDHPFLPTLYTHFETDKFSCLVMEFCP
Sbjct: 735 TRSYFAMKVMDKTSLASRKKLLRAQTEREILQSLDHPFLPTLYTHFETDKFSCLVMEFCP 556
Query: 181 GGDLHTLRQRQPGKYFSEQAAKFYVAEVLLALEYL 285
GGDLHTLRQRQPGKYFSEQAAK+ + ++ ++ Y+
Sbjct: 555 GGDLHTLRQRQPGKYFSEQAAKYVLLLMISSISYV 451
Score = 188 bits (405), Expect(2) = 5e-058
Identities = 74/82 (90%), Positives = 75/82 (91%)
Frame = +2 / -3
Query: 2 HGVTLP*RLWIRLLWQVGRSCFELRPSGRSCSPWTIHFYQPCILTLRQTSFHAWLWNSAL 181
HGVTL *RLWIRLLW+VGRSCFELRPSGRSCSPW IHFYQPCILTLRQ SFHAWLWNS L
Sbjct: 734 HGVTLL*RLWIRLLWRVGRSCFELRPSGRSCSPWIIHFYQPCILTLRQISFHAWLWNSVL 555
Query: 182 EGIFTLFAKGSLENIFQSKQQS 247
EG F LF KGSLENIFQSKQQS
Sbjct: 554 EGTFILFGKGSLENIFQSKQQS 489
Score = 182 bits (391), Expect(2) = 3e-056
Identities = 74/82 (90%), Positives = 78/82 (95%)
Frame = -2 / +1
Query: 246 LCCLL*KIFSRLPLAKSVKIPSRAEFHNQA*KLVCLKVSIQGW*KWMVQGLQDLPLGLSS 67
LCCLL*KIFSRLPL KS+K+PSR EFHNQA*KL+CLKVSIQGW*KWM+QGLQDLPLGLSS
Sbjct: 490 LCCLL*KIFSRLPLPKSMKVPSRTEFHNQA*KLICLKVSIQGW*KWMIQGLQDLPLGLSS 669
Query: 66 KQLLPTCQRSLIHNLHGKVTPC 1
KQLLPT QRSLIHNLH KVTPC
Sbjct: 670 KQLLPTRQRSLIHNLHSKVTPC 735
Score = 171 bits (368), Expect(2) = 2e-052
Identities = 74/85 (87%), Positives = 77/85 (90%)
Frame = +3 / -1
Query: 3 TELLCHEGYG*DFFGKSEEAASSSDRAGDPAVPGPSISTNPVYSL*DRQVFMLGYGILPW 182
TELLC+EGYG*DFFG+ EEAASSSDRAGDPAVPG SISTNPVYSL*DR VFMLGYGIL W
Sbjct: 733 TELLCYEGYG*DFFGE*EEAASSSDRAGDPAVPGSSISTNPVYSL*DR*VFMLGYGILSW 554
Query: 183 RGSSHSSPKAAWKIFFRASSKVLCS 257
RG S+SS KAAWKIFFRASSKV S
Sbjct: 553 RGPSYSSAKAAWKIFFRASSKVCTS 479
Score = 158 bits (339), Expect(2) = 2e-048
Identities = 73/82 (89%), Positives = 73/82 (89%)
Frame = -1 / +3
Query: 247 TLLLALKNIFQAAFGEECEDPLQGRIP*PSMKTCLSQSEYTGLVEMDGPGTAGSPARSEL 68
TLLLALKNIFQAAF EE E PLQ RIP*PSMKT LSQSEYTGLVEMD PGTAGSPARSEL
Sbjct: 489 TLLLALKNIFQAAFAEEYEGPLQDRIP*PSMKTYLSQSEYTGLVEMDDPGTAGSPARSEL 668
Query: 67 EAASSDLPKKSYP*PSWQSNSV 2
EAASS PKKSYP*PS QSNSV
Sbjct: 669 EAASSYSPKKSYP*PS*QSNSV 734
Score = 142 bits (304), Expect(2) = 3e-043
Identities = 64/81 (79%), Positives = 65/81 (80%)
Frame = -3 / +2
Query: 245 FAACSEKYFPGCLWRRV*RSPPGQNSITKHENLSVSK*VYRVGRNGWSRDCXXXXXXXXX 66
FAACSEKYFPGCL RRV*RSPPGQNSITKHENLSVSK*VYRVGRNG SRDC
Sbjct: 491 FAACSEKYFPGCLCRRV*RSPPGQNSITKHENLSVSK*VYRVGRNG*SRDCRISRSV*AR 670
Query: 65 XXXXRLAKEVLSITFMAK*LR 3
LAKEVLSITF+AK*LR
Sbjct: 671 SSFFLLAKEVLSITFIAK*LR 733
Score = 58.8 bits (122), Expect(2) = 3e-056
Identities = 22/23 (95%), Positives = 22/23 (95%)
Frame = -2 / +3
Query: 315 KITVYNPKHMQVFQCKEHLSYIE 247
KITVYNPKHMQVFQCKEHL YIE
Sbjct: 3 KITVYNPKHMQVFQCKEHLCYIE 71
Score = 58.3 bits (121), Expect(2) = 5e-058
Identities = 23/25 (92%), Positives = 24/25 (96%)
Frame = +3 / -2
Query: 243 KVLCS*GAPCIGIPAYAWDYIP*S* 317
+VLCS GAPCIGIPAYAWDYIP*S*
Sbjct: 75 QVLCSRGAPCIGIPAYAWDYIP*S* 1
Score = 56.5 bits (117), Expect(2) = 2e-052
Identities = 23/24 (95%), Positives = 24/24 (100%)
Frame = +1 / -3
Query: 244 KFYVAEVLLALEYLHMLGIIYRDL 315
+FYVAEVLLALEYLHMLGIIYRDL
Sbjct: 74 RFYVAEVLLALEYLHMLGIIYRDL 3
Score = 56.5 bits (117), Expect(2) = 2e-048
Identities = 24/24 (100%), Positives = 24/24 (100%)
Frame = -3 / +1
Query: 317 LRSRYIIPSICRYSNARSTSAT*N 246
LRSRYIIPSICRYSNARSTSAT*N
Sbjct: 1 LRSRYIIPSICRYSNARSTSAT*N 72
Score = 55.1 bits (114), Expect(2) = 3e-043
Identities = 23/24 (95%), Positives = 23/24 (95%)
Frame = -1 / +2
Query: 316 *DHGI*SQAYAGIPMQGAPQLHRT 245
*DHGI*SQAYAGIPMQGAP LHRT
Sbjct: 2 *DHGI*SQAYAGIPMQGAPLLHRT 73
>gb|CW360974.1|CW360974 fsbb001f029e24k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f029e24, DNA
sequence
Length = 763
Score = 204 bits (441), Expect = 5e-052
Identities = 83/95 (87%), Positives = 90/95 (94%)
Frame = +1 / +1
Query: 1 TRSYFAMKVMDKTSLASRKKLLRAQTEREILQSLDHPFLPTLYTHFETDKFSCLVMEFCP 180
TRSYFAMKVMDKTSLASRKKLLRAQTEREILQSLDHPFLPTLYTHFETDKFSCLVMEFCP
Sbjct: 253 TRSYFAMKVMDKTSLASRKKLLRAQTEREILQSLDHPFLPTLYTHFETDKFSCLVMEFCP 432
Query: 181 GGDLHTLRQRQPGKYFSEQAAKFYVAEVLLALEYL 285
GGDLHTLRQRQPGKYFSEQAAK+ + ++ ++ Y+
Sbjct: 433 GGDLHTLRQRQPGKYFSEQAAKYVLLLMISSISYV 537
Score = 188 bits (405), Expect = 4e-047
Identities = 74/82 (90%), Positives = 75/82 (91%)
Frame = +2 / +2
Query: 2 HGVTLP*RLWIRLLWQVGRSCFELRPSGRSCSPWTIHFYQPCILTLRQTSFHAWLWNSAL 181
HGVTL *RLWIRLLW+VGRSCFELRPSGRSCSPW IHFYQPCILTLRQ SFHAWLWNS L
Sbjct: 254 HGVTLL*RLWIRLLWRVGRSCFELRPSGRSCSPWIIHFYQPCILTLRQISFHAWLWNSVL 433
Query: 182 EGIFTLFAKGSLENIFQSKQQS 247
EG F LF KGSLENIFQSKQQS
Sbjct: 434 EGTFILFGKGSLENIFQSKQQS 499
Score = 182 bits (391), Expect = 4e-045
Identities = 74/82 (90%), Positives = 78/82 (95%)
Frame = -2 / -2
Query: 246 LCCLL*KIFSRLPLAKSVKIPSRAEFHNQA*KLVCLKVSIQGW*KWMVQGLQDLPLGLSS 67
LCCLL*KIFSRLPL KS+K+PSR EFHNQA*KL+CLKVSIQGW*KWM+QGLQDLPLGLSS
Sbjct: 498 LCCLL*KIFSRLPLPKSMKVPSRTEFHNQA*KLICLKVSIQGW*KWMIQGLQDLPLGLSS 319
Query: 66 KQLLPTCQRSLIHNLHGKVTPC 1
KQLLPT QRSLIHNLH KVTPC
Sbjct: 318 KQLLPTRQRSLIHNLHSKVTPC 253
Score = 171 bits (368), Expect = 6e-042
Identities = 74/85 (87%), Positives = 77/85 (90%)
Frame = +3 / +3
Query: 3 TELLCHEGYG*DFFGKSEEAASSSDRAGDPAVPGPSISTNPVYSL*DRQVFMLGYGILPW 182
TELLC+EGYG*DFFG+ EEAASSSDRAGDPAVPG SISTNPVYSL*DR VFMLGYGIL W
Sbjct: 255 TELLCYEGYG*DFFGE*EEAASSSDRAGDPAVPGSSISTNPVYSL*DR*VFMLGYGILSW 434
Query: 183 RGSSHSSPKAAWKIFFRASSKVLCS 257
RG S+SS KAAWKIFFRASSKV S
Sbjct: 435 RGPSYSSAKAAWKIFFRASSKVCTS 509
Score = 158 bits (339), Expect = 6e-038
Identities = 73/82 (89%), Positives = 73/82 (89%)
Frame = -1 / -1
Query: 247 TLLLALKNIFQAAFGEECEDPLQGRIP*PSMKTCLSQSEYTGLVEMDGPGTAGSPARSEL 68
TLLLALKNIFQAAF EE E PLQ RIP*PSMKT LSQSEYTGLVEMD PGTAGSPARSEL
Sbjct: 499 TLLLALKNIFQAAFAEEYEGPLQDRIP*PSMKTYLSQSEYTGLVEMDDPGTAGSPARSEL 320
Query: 67 EAASSDLPKKSYP*PSWQSNSV 2
EAASS PKKSYP*PS QSNSV
Sbjct: 319 EAASSYSPKKSYP*PS*QSNSV 254
Score = 142 bits (304), Expect = 4e-033
Identities = 64/81 (79%), Positives = 65/81 (80%)
Frame = -3 / -3
Query: 245 FAACSEKYFPGCLWRRV*RSPPGQNSITKHENLSVSK*VYRVGRNGWSRDCXXXXXXXXX 66
FAACSEKYFPGCL RRV*RSPPGQNSITKHENLSVSK*VYRVGRNG SRDC
Sbjct: 497 FAACSEKYFPGCLCRRV*RSPPGQNSITKHENLSVSK*VYRVGRNG*SRDCRISRSV*AR 318
Query: 65 XXXXRLAKEVLSITFMAK*LR 3
LAKEVLSITF+AK*LR
Sbjct: 317 SSFFLLAKEVLSITFIAK*LR 255
>gb|CW245415.1|CW245415 104_706_11220993_116_35080_041 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11220993, DNA
sequence
Length = 737
Score = 181 bits (390), Expect = 5e-045
Identities = 74/82 (90%), Positives = 77/82 (93%)
Frame = +1 / -3
Query: 1 TRSYFAMKVMDKTSLASRKKLLRAQTEREILQSLDHPFLPTLYTHFETDKFSCLVMEFCP 180
TR YFAMKVMDK SLASRKKL RAQTEREILQ LDHPFLPTLYTHFETD+FSCLVMEFCP
Sbjct: 288 TRCYFAMKVMDKASLASRKKLNRAQTEREILQLLDHPFLPTLYTHFETDRFSCLVMEFCP 109
Query: 181 GGDLHTLRQRQPGKYFSEQAAK 246
GGDLHTLRQRQPGK+FSE AA+
Sbjct: 108 GGDLHTLRQRQPGKHFSEYAAR 43
Score = 115 bits (245), Expect = 5e-025
Identities = 53/80 (66%), Positives = 56/80 (70%)
Frame = -3 / +2
Query: 242 AACSEKYFPGCLWRRV*RSPPGQNSITKHENLSVSK*VYRVGRNGWSRDCXXXXXXXXXX 63
AA SEK FPGCL R+V RSPPGQNSITK ENLSVSK VY VGRNGWSR C
Sbjct: 47 AAYSEKCFPGCLCRKVCRSPPGQNSITKQENLSVSKCVYNVGRNGWSRSCRISLSV*ALF 226
Query: 62 XXXRLAKEVLSITFMAK*LR 3
LAK+ LSITF+AK* R
Sbjct: 227 NFFLLAKDALSITFIAK*HR 286
>gb|BM326604.1|BM326604 PIC1_59_C05.b1_A002 Pathogen-infected compatible 1 (PIC1) Sorghum
bicolor cDNA, mRNA sequence
Length = 507
Score = 180 bits (388), Expect = 1e-044
Identities = 74/126 (58%), Positives = 90/126 (71%)
Frame = +1 / +2
Query: 1 TRSYFAMKVMDKTSLASRKKLLRAQTEREILQSLDHPFLPTLYTHFETDKFSCLVMEFCP 180
T YFAMK MDK+ + +R K+ RA ER+IL LDHPFLPTLY F+T CL+ ++
Sbjct: 68 TGEYFAMKAMDKSVMLNRNKVHRATAERQILDMLDHPFLPTLYASFQTKTHVCLITDYYA 247
Query: 181 GGDLHTLRQRQPGKYFSEQAAKFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIML 360
GG+L L RQP K E A +FY AEV+ ALEYLH GIIYRDLKPEN+L++ DGHI L
Sbjct: 248 GGELFMLLDRQPMKVLKEDAVRFYAAEVVTALEYLHCQGIIYRDLKPENILLQRDGHISL 427
Query: 361 SDFDLS 378
+DFDLS
Sbjct: 428 TDFDLS 445
>gb|BI141662.1|BI141662 IP1_55_D04.b1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 415
Score = 168 bits (362), Expect = 4e-041
Identities = 69/69 (100%), Positives = 69/69 (100%)
Frame = +1 / +1
Query: 1 TRSYFAMKVMDKTSLASRKKLLRAQTEREILQSLDHPFLPTLYTHFETDKFSCLVMEFCP 180
TRSYFAMKVMDKTSLASRKKLLRAQTEREILQSLDHPFLPTLYTHFETDKFSCLVMEFCP
Sbjct: 208 TRSYFAMKVMDKTSLASRKKLLRAQTEREILQSLDHPFLPTLYTHFETDKFSCLVMEFCP 387
Query: 181 GGDLHTLRQ 207
GGDLHTLRQ
Sbjct: 388 GGDLHTLRQ 414
Score = 159 bits (342), Expect = 2e-038
Identities = 61/69 (88%), Positives = 62/69 (89%)
Frame = +2 / +2
Query: 2 HGVTLP*RLWIRLLWQVGRSCFELRPSGRSCSPWTIHFYQPCILTLRQTSFHAWLWNSAL 181
HGVTL *RLWIRLLW+VGRSCFELRPSGRSCSPW IHFYQPCILTLRQ SFHAWLWNS L
Sbjct: 209 HGVTLL*RLWIRLLWRVGRSCFELRPSGRSCSPWIIHFYQPCILTLRQISFHAWLWNSVL 388
Query: 182 EGIFTLFAK 208
EG F LF K
Sbjct: 389 EGTFILFGK 415
Score = 151 bits (325), Expect = 5e-036
Identities = 61/69 (88%), Positives = 65/69 (94%)
Frame = -2 / -2
Query: 207 LAKSVKIPSRAEFHNQA*KLVCLKVSIQGW*KWMVQGLQDLPLGLSSKQLLPTCQRSLIH 28
L KS+K+PSR EFHNQA*KL+CLKVSIQGW*KWM+QGLQDLPLGLSSKQLLPT QRSLIH
Sbjct: 414 LPKSMKVPSRTEFHNQA*KLICLKVSIQGW*KWMIQGLQDLPLGLSSKQLLPTRQRSLIH 235
Query: 27 NLHGKVTPC 1
NLH KVTPC
Sbjct: 234 NLHSKVTPC 208
Score = 138 bits (296), Expect = 5e-032
Identities = 59/67 (88%), Positives = 62/67 (92%)
Frame = +3 / +3
Query: 3 TELLCHEGYG*DFFGKSEEAASSSDRAGDPAVPGPSISTNPVYSL*DRQVFMLGYGILPW 182
TELLC+EGYG*DFFG+ EEAASSSDRAGDPAVPG SISTNPVYSL*DR VFMLGYGIL W
Sbjct: 210 TELLCYEGYG*DFFGE*EEAASSSDRAGDPAVPGSSISTNPVYSL*DR*VFMLGYGILSW 389
Query: 183 RGSSHSS 203
RG S+SS
Sbjct: 390 RGPSYSS 410
Score = 131 bits (280), Expect = 8e-030
Identities = 60/69 (86%), Positives = 60/69 (86%)
Frame = -1 / -1
Query: 208 FGEECEDPLQGRIP*PSMKTCLSQSEYTGLVEMDGPGTAGSPARSELEAASSDLPKKSYP 29
F EE E PLQ RIP*PSMKT LSQSEYTGLVEMD PGTAGSPARSELEAASS PKKSYP
Sbjct: 415 FAEEYEGPLQDRIP*PSMKTYLSQSEYTGLVEMDDPGTAGSPARSELEAASSYSPKKSYP 236
Query: 28 *PSWQSNSV 2
*PS QSNSV
Sbjct: 235 *PS*QSNSV 209
Score = 108 bits (230), Expect = 6e-023
Identities = 51/67 (76%), Positives = 52/67 (77%)
Frame = -3 / -3
Query: 203 RRV*RSPPGQNSITKHENLSVSK*VYRVGRNGWSRDCXXXXXXXXXXXXXRLAKEVLSIT 24
RRV*RSPPGQNSITKHENLSVSK*VYRVGRNG SRDC LAKEVLSIT
Sbjct: 410 RRV*RSPPGQNSITKHENLSVSK*VYRVGRNG*SRDCRISRSV*ARSSFFLLAKEVLSIT 231
Query: 23 FMAK*LR 3
F+AK*LR
Sbjct: 230 FIAK*LR 210
>gb|CW384339.1|CW384339 fsbb001f067f05k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f067f05, DNA
sequence
Length = 564
Score = 100 bits (214), Expect(3) = 2e-040
Identities = 41/63 (65%), Positives = 52/63 (82%)
Frame = +1 / +2
Query: 244 KFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCSVSLTVIKSANP 423
+FY AEVLLALEYLHM+GI+YRDLKPENVL+R DGHIML+DFDLSL+ + + ++ S+
Sbjct: 320 RFYAAEVLLALEYLHMMGIVYRDLKPENVLIRADGHIMLTDFDLSLQSTSTPSLESSSAS 499
Query: 424 GLD 432
D
Sbjct: 500 SSD 508
Score = 54.2 bits (112), Expect(3) = 2e-040
Identities = 19/32 (59%), Positives = 25/32 (78%)
Frame = +1 / +2
Query: 151 FSCLVMEFCPGGDLHTLRQRQPGKYFSEQAAK 246
FSC+V+EFCPGGDLH+LR R P + F +A+
Sbjct: 113 FSCVVVEFCPGGDLHSLRHRMPNRRFPLASAR 208
Score = 49.2 bits (101), Expect(3) = 2e-040
Identities = 19/33 (57%), Positives = 25/33 (75%)
Frame = +1 / +2
Query: 43 LASRKKLLRAQTEREILQSLDHPFLPTLYTHFE 141
+A +KKL RA E+ IL+ LDHPFLPTL+ F+
Sbjct: 2 VAKKKKLERAAAEKRILRVLDHPFLPTLFADFD 100
>gb|CW041215.1|CW041215 104_274_10506451_114_30469 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10506451, DNA
sequence
Length = 439
Score = 166 bits (356), Expect = 3e-040
Identities = 63/109 (57%), Positives = 82/109 (75%)
Frame = +1 / -3
Query: 79 EREILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAAKFYVA 258
E +L SLDHPF+PTLY + +++C +M++C GGDLH + +R+PG AA+FY A
Sbjct: 395 ESRVLSSLDHPFVPTLYARLDAGRYACFLMDYCSGGDLHAVLRRRPGARLPVAAARFYAA 216
Query: 259 EVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCSVSLTV 405
EVLLA+EYLH LG +YRDLKPENVL+R DGH++LSDFDL+L SV V
Sbjct: 215 EVLLAIEYLHALGFVYRDLKPENVLLRGDGHVVLSDFDLALPASVEPAV 69
>gb|CW192580.1|CW192580 104_615_11179105_148_36770_013 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11179105, DNA
sequence
Length = 579
Score = 165 bits (355), Expect = 3e-040
Identities = 65/80 (81%), Positives = 72/80 (90%)
Frame = +1 / -2
Query: 10 YFAMKVMDKTSLASRKKLLRAQTEREILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGD 189
+FAMKVMDK SL SR+KL RAQTEREILQ LDHPFLPTLY HFETD+F+CLVMEFCPGGD
Sbjct: 359 WFAMKVMDKASLESRRKLSRAQTEREILQLLDHPFLPTLYAHFETDRFACLVMEFCPGGD 180
Query: 190 LHTLRQRQPGKYFSEQAAKF 249
LH LRQRQPGK+F E AA++
Sbjct: 179 LHALRQRQPGKHFPEHAARY 120
>gb|CW280288.1|CW280288 104_755_11407540_148_35446_008 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11407540, DNA
sequence
Length = 652
Score = 165 bits (355), Expect = 3e-040
Identities = 66/91 (72%), Positives = 80/91 (87%)
Frame = +1 / +3
Query: 163 VMEFCPGGDLHTLRQRQPGKYFSEQAAKFYVAEVLLALEYLHMLGIIYRDLKPENVLVRE 342
+ME+C GG+LH+LRQRQPGK F+E AA+FY EVLLALEYLHMLG++YRDLKPENVLVRE
Sbjct: 3 LMEYCCGGNLHSLRQRQPGKRFAEDAARFYACEVLLALEYLHMLGVVYRDLKPENVLVRE 182
Query: 343 DGHIMLSDFDLSLRCSVSLTVIKSANPGLDA 435
+GHIMLSDFDLSLRCSVS +++S + + A
Sbjct: 183 EGHIMLSDFDLSLRCSVSPALVRSPSGRVSA 275
Score = 116 bits (249), Expect = 1e-025
Identities = 52/77 (67%), Positives = 57/77 (74%)
Frame = -3 / -1
Query: 395 LTEQRRDRSKSDSMMWPSSRTRTFSGLRSRYIIPSICRYSNARSTSAT*NFAACSEKYFP 216
LTEQR +RSKS+SMM PSS T TFSGLRSRY PS+CRYS+A STS *N AA S K P
Sbjct: 235 LTEQRSERSKSESMMCPSSLTSTFSGLRSRYTTPSMCRYSSASSTSQA*NLAASSAKRLP 56
Query: 215 GCLWRRV*RSPPGQNSI 165
GC WRR R PP Q S+
Sbjct: 55 GCRWRREWRLPPQQYSM 5
>gb|CW406139.1|CW406139 fsbb001f099a08k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f099a08, DNA
sequence
Length = 646
Score = 165 bits (355), Expect = 3e-040
Identities = 65/80 (81%), Positives = 72/80 (90%)
Frame = +1 / -2
Query: 10 YFAMKVMDKTSLASRKKLLRAQTEREILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGD 189
+FAMKVMDK SL SR+KL RAQTEREILQ LDHPFLPTLY HFETD+F+CLVMEFCPGGD
Sbjct: 507 WFAMKVMDKASLESRRKLSRAQTEREILQLLDHPFLPTLYAHFETDRFACLVMEFCPGGD 328
Query: 190 LHTLRQRQPGKYFSEQAAKF 249
LH LRQRQPGK+F E AA++
Sbjct: 327 LHALRQRQPGKHFPEHAARY 268
>gb|CW418076.1|CW418076 fsbb001f121g03f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f121g03, DNA
sequence
Length = 717
Score = 165 bits (355), Expect = 3e-040
Identities = 65/80 (81%), Positives = 72/80 (90%)
Frame = +1 / +1
Query: 10 YFAMKVMDKTSLASRKKLLRAQTEREILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGD 189
+FAMKVMDK SL SR+KL RAQTEREILQ LDHPFLPTLY HFETD+F+CLVMEFCPGGD
Sbjct: 331 WFAMKVMDKASLESRRKLSRAQTEREILQLLDHPFLPTLYAHFETDRFACLVMEFCPGGD 510
Query: 190 LHTLRQRQPGKYFSEQAAKF 249
LH LRQRQPGK+F E AA++
Sbjct: 511 LHALRQRQPGKHFPEHAARY 570
>gb|CW384690.1|CW384690 fsbb001f067n05k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f067n05, DNA
sequence
Length = 467
Score = 95.9 bits (203), Expect(3) = 6e-040
Identities = 37/45 (82%), Positives = 42/45 (93%)
Frame = +1 / +2
Query: 244 KFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 378
+FY EVLLALEYLHM+GI+YRDLKPENVL+R DGHIML+DFDLS
Sbjct: 332 RFYTEEVLLALEYLHMMGIVYRDLKPENVLIRADGHIMLTDFDLS 466
Score = 54.2 bits (112), Expect(3) = 6e-040
Identities = 19/32 (59%), Positives = 25/32 (78%)
Frame = +1 / +2
Query: 151 FSCLVMEFCPGGDLHTLRQRQPGKYFSEQAAK 246
FSC+V+EFCPGGDLH+LR R P + F +A+
Sbjct: 125 FSCVVVEFCPGGDLHSLRHRMPNRRFPLASAR 220
Score = 51.5 bits (106), Expect(3) = 6e-040
Identities = 20/37 (54%), Positives = 27/37 (72%)
Frame = +1 / +2
Query: 31 DKTSLASRKKLLRAQTEREILQSLDHPFLPTLYTHFE 141
D+ +A +KKL RA E+ IL+ LDHPFLPTL+ F+
Sbjct: 2 DRRVVAKKKKLERAAAEKRILRVLDHPFLPTLFADFD 112
>gb|CW270918.1|CW270918 104_742_11402708_148_35335_066 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11402708, DNA
sequence
Length = 679
Score = 157 bits (338), Expect = 8e-038
Identities = 62/92 (67%), Positives = 76/92 (82%)
Frame = +1 / +1
Query: 151 FSCLVMEFCPGGDLHTLRQRQPGKYFSEQAAKFYVAEVLLALEYLHMLGIIYRDLKPENV 330
+SC+VMEFCPGGDLH+LR R PG+ F +A+FY AEVLLALEYLHM+GI+YRDLKPENV
Sbjct: 40 YSCIVMEFCPGGDLHSLRHRMPGRRFPLASARFYAAEVLLALEYLHMMGIVYRDLKPENV 219
Query: 331 LVREDGHIMLSDFDLSLRCSVSLTVIKSANPG 426
L+R DGHIML+DFDLSL + S ++ + N G
Sbjct: 220 LIRGDGHIMLTDFDLSLESTASPSLEDARNVG 315
Score = 121 bits (258), Expect = 8e-027
Identities = 53/75 (70%), Positives = 57/75 (76%)
Frame = -3 / -3
Query: 377 DRSKSDSMMWPSSRTRTFSGLRSRYIIPSICRYSNARSTSAT*NFAACSEKYFPGCLWRR 198
DRSKS SMMWPS R TFSGLRSRY +P +CRYS+ARSTSA *N A S K PG WRR
Sbjct: 266 DRSKSVSMMWPSPRISTFSGLRSRYTMPIMCRYSSARSTSAA*NRADASGKRRPGMRWRR 87
Query: 197 V*RSPPGQNSITKHE 153
RSPPGQNS+T HE
Sbjct: 86 EWRSPPGQNSMTMHE 42
>gb|CW302164.1|CW302164 104_786_11464579_148_35666_076 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11464579, DNA
sequence
Length = 615
Score = 156 bits (336), Expect = 1e-037
Identities = 58/99 (58%), Positives = 76/99 (76%)
Frame = +1 / +1
Query: 79 EREILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAAKFYVA 258
E +L SLDHPF+PTLY + +++C +M++C GGDLH + +R+PG AA+FY A
Sbjct: 319 ESRVLSSLDHPFVPTLYARLDAGRYACFLMDYCSGGDLHAVLRRKPGARLPVAAARFYAA 498
Query: 259 EVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDL 375
EVLLA+EYLH LG +YRDLKPENVLVR DGH++LSD +L
Sbjct: 499 EVLLAIEYLHALGFVYRDLKPENVLVRGDGHVVLSDLNL 615
>gb|CL151421.1|CL151421 104_334_10779234_116_31362_018 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10779234, DNA
sequence
Length = 599
Score = 152 bits (326), Expect = 3e-036
Identities = 59/80 (73%), Positives = 68/80 (85%)
Frame = +1 / -3
Query: 10 YFAMKVMDKTSLASRKKLLRAQTEREILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGD 189
+FAMKVMDK SL SR+K+ RAQ EREILQ LDHPFLPTLY HFETD+ +CLVMEFCPGGD
Sbjct: 402 WFAMKVMDKVSLESRRKMSRAQMEREILQLLDHPFLPTLYAHFETDRLACLVMEFCPGGD 223
Query: 190 LHTLRQRQPGKYFSEQAAKF 249
LH + QRQPGK+F E A++
Sbjct: 222 LHAVWQRQPGKHFPEHVARY 163
>gb|CW176243.1|CW176243 104_589_11158384_116_36585_062 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11158384, DNA
sequence
Length = 683
Score = 150 bits (323), Expect = 9e-036
Identities = 62/85 (72%), Positives = 70/85 (82%)
Frame = +1 / +3
Query: 13 FAMKVMDKTSLASRKKLLRAQTEREILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDL 192
FA+KVMD L SRKK+LRAQTEREILQ LDHPFLPTLY+HF TD SCLVMEFCPGGDL
Sbjct: 246 FALKVMDIEYLISRKKMLRAQTEREILQMLDHPFLPTLYSHFTTDNLSCLVMEFCPGGDL 425
Query: 193 HTLRQRQPGKYFSEQAAKFYVAEVL 267
H LRQ+QP K FSE AA++ + +L
Sbjct: 426 HVLRQKQPTKTFSEAAARYELIVML 500
>gb|CD236213.1|CD236213 SS1_32_H04.g1_A012 Salt-stressed seedlings Sorghum bicolor cDNA
clone SS1_32_H04_A012 5', mRNA sequence
Length = 581
Score = 141 bits (303), Expect = 5e-033
Identities = 57/98 (58%), Positives = 70/98 (71%)
Frame = +1 / +2
Query: 13 FAMKVMDKTSLASRKKLLRAQTEREILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDL 192
FAMK MDK+ + +R K+ R EREI LDHPFLPTLYT F+T CL+ +FCPGG+L
Sbjct: 287 FAMKAMDKSVMLNRNKVHRVCIEREIYSLLDHPFLPTLYTSFQTPTHVCLITDFCPGGEL 466
Query: 193 HTLRQRQPGKYFSEQAAKFYVAEVLLALEYLHMLGIIY 306
L QP K F E++A+FY AEV++ LEYLH LGIIY
Sbjct: 467 FALLDMQPMKLFREESARFYAAEVVIGLEYLHFLGIIY 580
>gb|CW169384.1|CW169384 104_579_11154645_148_36500_089 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11154645, DNA
sequence
Length = 695
Score = 137 bits (293), Expect = 1e-031
Identities = 54/85 (63%), Positives = 67/85 (78%)
Frame = +1 / -1
Query: 1 TRSYFAMKVMDKTSLASRKKLLRAQTEREILQSLDHPFLPTLYTHFETDKFSCLVMEFCP 180
T +AMKV+DK +LA RKKL RA+ EREIL++LDHPFLPTLY FE ++CLVMEFCP
Sbjct: 557 TGCLYAMKVVDKDALAFRKKLRRAEVEREILRTLDHPFLPTLYADFEASHYACLVMEFCP 378
Query: 181 GGDLHTLRQRQPGKYFSEQAAKFYV 255
GGDLH RQRQPG+ FS +A++ +
Sbjct: 377 GGDLHVARQRQPGRRFSISSARYCI 303
>gb|CW345643.1|CW345643 104_848_11488604_116_36212_068 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11488604, DNA
sequence
Length = 650
Score = 137 bits (293), Expect = 1e-031
Identities = 54/85 (63%), Positives = 67/85 (78%)
Frame = +1 / -1
Query: 1 TRSYFAMKVMDKTSLASRKKLLRAQTEREILQSLDHPFLPTLYTHFETDKFSCLVMEFCP 180
T +AMKV+DK +LA RKKL RA+ EREIL++LDHPFLPTLY FE ++CLVMEFCP
Sbjct: 626 TGCLYAMKVVDKDALAFRKKLRRAEVEREILRTLDHPFLPTLYADFEASHYACLVMEFCP 447
Query: 181 GGDLHTLRQRQPGKYFSEQAAKFYV 255
GGDLH RQRQPG+ FS +A++ +
Sbjct: 446 GGDLHVARQRQPGRRFSISSARYCI 372
>gb|CW345644.1|CW345644 104_848_11488604_148_36211_068 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11488604, DNA
sequence
Length = 773
Score = 137 bits (293), Expect = 1e-031
Identities = 54/85 (63%), Positives = 67/85 (78%)
Frame = +1 / +1
Query: 1 TRSYFAMKVMDKTSLASRKKLLRAQTEREILQSLDHPFLPTLYTHFETDKFSCLVMEFCP 180
T +AMKV+DK +LA RKKL RA+ EREIL++LDHPFLPTLY FE ++CLVMEFCP
Sbjct: 199 TGCLYAMKVVDKDALAFRKKLRRAEVEREILRTLDHPFLPTLYADFEASHYACLVMEFCP 378
Query: 181 GGDLHTLRQRQPGKYFSEQAAKFYV 255
GGDLH RQRQPG+ FS +A++ +
Sbjct: 379 GGDLHVARQRQPGRRFSISSARYCI 453
>gb|CW041216.1|CW041216 104_274_10506451_116_30433 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10506451, DNA
sequence
Length = 653
Score = 136 bits (292), Expect = 2e-031
Identities = 50/87 (57%), Positives = 66/87 (75%)
Frame = +1 / +2
Query: 79 EREILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAAKFYVA 258
E +L SLDHPF+PTLY + +++C +M++C GGDLH + +R+PG AA+FY A
Sbjct: 392 ESRVLSSLDHPFVPTLYARLDAGRYACFLMDYCSGGDLHAVLRRRPGARLPVAAARFYAA 571
Query: 259 EVLLALEYLHMLGIIYRDLKPENVLVR 339
EVLLA+EYLH LG +YRDLKPENVL+R
Sbjct: 572 EVLLAIEYLHALGFVYRDLKPENVLLR 652
>gb|CW310536.1|CW310536 104_799_11469765_116_37434_083 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11469765, DNA
sequence
Length = 614
Score = 133 bits (285), Expect = 2e-030
Identities = 54/68 (79%), Positives = 63/68 (92%)
Frame = +1 / -3
Query: 208 RQPGKYFSEQAAKFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRC 387
+QPGK+F+E AA+F VAEVLLA+EYLHMLGI+YRDLKPENVLVREDGHIMLSDFDL LRC
Sbjct: 612 KQPGKHFTEPAARF*VAEVLLAMEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLLLRC 433
Query: 388 SVSLTVIK 411
+V T++K
Sbjct: 432 TVCRTLVK 409
Score = 107 bits (229), Expect = 8e-023
Identities = 48/68 (70%), Positives = 53/68 (77%)
Frame = -3 / +2
Query: 413 DLITVRLTEQRRDRSKSDSMMWPSSRTRTFSGLRSRYIIPSICRYSNARSTSAT*NFAAC 234
+L +VR T R +RSKS+SMMWPSSRT TFSGLRS Y IPS+CRYS A STSAT*N AA
Sbjct: 407 NLTSVRHTVHRSNRSKSESMMWPSSRTSTFSGLRSLYTIPSMCRYSMASSTSAT*NLAAG 586
Query: 233 SEKYFPGC 210
S K PGC
Sbjct: 587 SVKCLPGC 610
>gb|CW467993.1|CW467993 fsbb001f219o18f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f219o18, DNA
sequence
Length = 594
Score = 94.1 bits (199), Expect(2) = 2e-029
Identities = 37/54 (68%), Positives = 45/54 (83%)
Frame = +1 / -1
Query: 223 YFSEQAAKFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLR 384
+F A +FY AE++LALEYLH LGI+YRDLKPENVL+++ GHIML DFDLS R
Sbjct: 240 FFPPIARRFYAAELVLALEYLHSLGIVYRDLKPENVLIQDSGHIMLVDFDLSTR 79
Score = 55.6 bits (115), Expect(2) = 2e-029
Identities = 23/57 (40%), Positives = 35/57 (61%)
Frame = +1 / -2
Query: 79 EREILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAAKF 249
ER++L +L HP LP+L TD ++ C GGDL++LR+RQ K FS+ ++
Sbjct: 530 ERDVLLALRHPLLPSLRGILATDAVVGFAIDRCGGGDLNSLRRRQTEKMFSDSVIRY 360
>gb|CW071957.1|CW071957 104_324_10591975_116_30462 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10591975, DNA
sequence
Length = 342
Score = 127 bits (273), Expect = 7e-029
Identities = 54/101 (53%), Positives = 67/101 (66%)
Frame = +1 / -2
Query: 67 RAQTEREILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAAK 246
RA+ E +L L HP LP++ ET + +CPGGDL+ LR QP + FS A +
Sbjct: 305 RARWEVSVLSRLAHPHLPSMLGCAETPDLLAWALPYCPGGDLNELRHAQPDRVFSPAAIR 126
Query: 247 FYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDF 369
FYVAEV+ AL LH GI YRDLKPENVL+R DGH+ML+DF
Sbjct: 125 FYVAEVVSALAELHATGIAYRDLKPENVLLRADGHVMLTDF 3
>gb|CW184959.1|CW184959 104_602_11165812_116_36692_008 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11165812, DNA
sequence
Length = 542
Score = 127 bits (272), Expect = 1e-028
Identities = 49/78 (62%), Positives = 62/78 (79%)
Frame = +1 / +3
Query: 22 KVMDKTSLASRKKLLRAQTEREILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTL 201
+ +DK +LA RKKL RA+ EREIL++LDHPFLPTLY FE ++CLVMEFCPGGDLH
Sbjct: 99 RCVDKDALAFRKKLRRAEVEREILRTLDHPFLPTLYADFEASHYACLVMEFCPGGDLHVA 278
Query: 202 RQRQPGKYFSEQAAKFYV 255
RQRQPG+ FS +A++ +
Sbjct: 279 RQRQPGRRFSISSARYCI 332
>gb|CF428102.1|CF428102 PH1_12_H12.g1_A002 Phosphorous-deficient seedlings Sorghum bicolor
cDNA clone PH1_12_H12_A002 5', mRNA sequence
Length = 709
Score = 125 bits (268), Expect = 3e-028
Identities = 54/119 (45%), Positives = 74/119 (62%)
Frame = +1 / +2
Query: 67 RAQTEREILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAAK 246
RA+ E +L L HP LP+L ETD + +C GGDL+ LR P + FS A +
Sbjct: 332 RARWEINVLSRLAHPHLPSLLGFTETDDLLAWAVPYCSGGDLNELRYSLPDRVFSPAAIR 511
Query: 247 FYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCSVSLTVIKSANP 423
FY+AE++ A+ LH G++YRDLKPENVL+R DG + L+DFDLS S + S++P
Sbjct: 512 FYIAEIVSAVAELHAAGVVYRDLKPENVLLRADGLVTLTDFDLSRLLQPSRSADSSSSP 688
>gb|CW343533.1|CW343533 104_845_11487471_116_36181_050 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11487471, DNA
sequence
Length = 690
Score = 119 bits (255), Expect = 2e-026
Identities = 49/70 (70%), Positives = 60/70 (85%)
Frame = +1 / -1
Query: 208 RQPGKYFSEQAAKFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRC 387
RQ + + +FY AEVLLALEYLHMLG++YRDLKPENVLVR+DGHIMLSDFDLSLRC
Sbjct: 282 RQAVTWIALILCRFYAAEVLLALEYLHMLGVVYRDLKPENVLVRDDGHIMLSDFDLSLRC 103
Query: 388 SVSLTVIKSA 417
+VS T+I+++
Sbjct: 102 AVSPTLIRTS 73
>gb|CW180308.1|CW180308 104_594_11160567_148_36632_052 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11160567, DNA
sequence
Length = 694
Score = 86.8 bits (183), Expect(2) = 4e-025
Identities = 32/51 (62%), Positives = 43/51 (84%)
Frame = +1 / +2
Query: 226 FSEQAAKFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 378
F E +FY AE++LALE+LH LG+++RDLKPEN+L+++ GHIML DFDLS
Sbjct: 299 FPESVIRFYAAELVLALEHLHGLGVVHRDLKPENILIQDSGHIMLVDFDLS 451
Score = 48.3 bits (99), Expect(2) = 4e-025
Identities = 21/44 (47%), Positives = 27/44 (61%)
Frame = +1 / +2
Query: 79 EREILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQR 210
ER++L SL HP LP+L TD + CPGGDL +LR+R
Sbjct: 149 ERDVLLSLRHPLLPSLRGVVATDTVVGFAITRCPGGDLKSLRRR 280
>gb|CW041218.1|CW041218 104_274_10506451_116_30481 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10506451, DNA
sequence
Length = 627
Score = 114 bits (244), Expect = 7e-025
Identities = 41/78 (52%), Positives = 56/78 (71%)
Frame = +1 / +2
Query: 79 EREILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAAKFYVA 258
E +L SLDHPF+PTLY + +++C +M++C GGDLH + +R+PG AA+FY A
Sbjct: 392 ESRVLSSLDHPFVPTLYARLDAGRYACFLMDYCSGGDLHAVLRRRPGARLPVAAARFYAA 571
Query: 259 EVLLALEYLHMLGIIYRD 312
EVLLA+EY H LG +YRD
Sbjct: 572 EVLLAIEYPHALGFVYRD 625
>gb|BZ334670.1|BZ334670 hx80g11.b1 WGS-SbicolorF (JM107 adapted methyl filtered) Sorghum
bicolor genomic clone hx80g11 5', DNA sequence
Length = 438
Score = 113 bits (241), Expect = 2e-024
Identities = 46/68 (67%), Positives = 53/68 (77%)
Frame = +1 / -2
Query: 175 CPGGDLHTLRQRQPGKYFSEQAAKFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHI 354
CPGGDL+ LR QP + FS A +FYVAEV+ AL LH GI YRDLKPENVL+R DGH+
Sbjct: 437 CPGGDLNELRHAQPDRVFSPAAIRFYVAEVVSALAELHATGIAYRDLKPENVLLRADGHV 258
Query: 355 MLSDFDLS 378
ML+DFDLS
Sbjct: 257 MLTDFDLS 234
>gb|BM324737.1|BM324737 PIC1_35_A07.b1_A002 Pathogen-infected compatible 1 (PIC1) Sorghum
bicolor cDNA, mRNA sequence
Length = 494
Score = 113 bits (241), Expect = 2e-024
Identities = 45/74 (60%), Positives = 55/74 (74%)
Frame = +1 / +2
Query: 157 CLVMEFCPGGDLHTLRQRQPGKYFSEQAAKFYVAEVLLALEYLHMLGIIYRDLKPENVLV 336
CL+ ++ GG+L L RQP K E A +FY AEV+ ALEYLH GIIYRDLKPEN+L+
Sbjct: 17 CLITDYYAGGELFMLLDRQPMKVLKEDAVRFYAAEVVTALEYLHCQGIIYRDLKPENILL 196
Query: 337 REDGHIMLSDFDLS 378
+ DGHI L+DFDLS
Sbjct: 197 QRDGHISLTDFDLS 238
>gb|BM325667.1|BM325667 PIC1_47_C12.b1_A002 Pathogen-infected compatible 1 (PIC1) Sorghum
bicolor cDNA, mRNA sequence
Length = 611
Score = 113 bits (241), Expect = 2e-024
Identities = 45/74 (60%), Positives = 55/74 (74%)
Frame = +1 / +2
Query: 157 CLVMEFCPGGDLHTLRQRQPGKYFSEQAAKFYVAEVLLALEYLHMLGIIYRDLKPENVLV 336
CL+ ++ GG+L L RQP K E A +FY AEV+ ALEYLH GIIYRDLKPEN+L+
Sbjct: 17 CLITDYYAGGELFMLLDRQPMKVLKEDAVRFYAAEVVTALEYLHCQGIIYRDLKPENILL 196
Query: 337 REDGHIMLSDFDLS 378
+ DGHI L+DFDLS
Sbjct: 197 QRDGHISLTDFDLS 238
>gb|CF427451.1|CF427451 PH1_1_F03.g1_A002 Phosphorous-deficient seedlings Sorghum bicolor
cDNA clone PH1_1_F03_A002 5', mRNA sequence
Length = 630
Score = 113 bits (241), Expect = 2e-024
Identities = 47/85 (55%), Positives = 61/85 (71%)
Frame = +1 / +3
Query: 79 EREILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAAKFYVA 258
ER++L +L HP LP+L TD ++ C GGDL++LR+RQ K FS+ +FY A
Sbjct: 375 ERDVLLALRHPLLPSLRGILATDAVVGFAIDRCGGGDLNSLRRRQTEKMFSDSVIRFYAA 554
Query: 259 EVLLALEYLHMLGIIYRDLKPENVL 333
E++LALEYLH LGI+YRDLKPENVL
Sbjct: 555 ELVLALEYLHSLGIVYRDLKPENVL 629
>gb|CW311718.1|CW311718 104_801_11470377_148_36278_041 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11470377, DNA
sequence
Length = 635
Score = 106 bits (226), Expect = 2e-022
Identities = 41/50 (82%), Positives = 47/50 (94%)
Frame = +1 / +1
Query: 244 KFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCSV 393
+FYVAE +LALEYLHM+G++YRDLKPENVLVR DGHIMLSDFDLSL+C V
Sbjct: 58 RFYVAETVLALEYLHMMGVVYRDLKPENVLVRGDGHIMLSDFDLSLKCDV 207
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 622,062,075
Number of Sequences: 832831
Number of extensions: 9582484
Number of successful extensions: 168679
Number of sequences better than 1.0e-020: 43
length of database: 163,786,556
effective HSP length: 52
effective length of database: 120,479,344
effective search space used: 11927455056
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)