TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= QBS7b05.xg.2.1
(526 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CF433456.1|CF433456 NIT1_27_E11.b1_A002 Nitrogen-deficie... 217 9e-062
gb|CL167975.1|CL167975 104_365_10810478_116_31805_158 Sorgh... 217 1e-061
gb|CF429881.1|CF429881 PH1_25_C04.b1_A002 Phosphorous-defic... 211 5e-060
gb|CL167974.1|CL167974 104_365_10810478_114_31804_158 Sorgh... 217 5e-059
gb|CW031320.1|CW031320 104_259_10500738_116_30398 Sorghum m... 217 1e-057
gb|CW315001.1|CW315001 104_805_11472128_148_35822_018 Sorgh... 217 1e-057
gb|CW235188.1|CW235188 104_690_11214849_116_37409_041 Sorgh... 217 1e-055
gb|BF420934.1|BF420934 FM1_5_B03.g1_A003 Floral-Induced Mer... 199 2e-050
gb|AW283377.1|AW283377 LG1_223_D12.g1_A002 Light Grown 1 (L... 186 3e-046
gb|BG103131.1|BG103131 RHIZ2_18_E07.g1_A003 Rhizome2 (RHIZ2... 186 3e-046
gb|BG557221.1|BG557221 EM1_44_B10.g1_A002 Embryo 1 (EM1) So... 186 3e-046
gb|BG947765.1|BG947765 IP1_8_G12.g1_A002 Immature pannicle ... 186 3e-046
gb|BI074550.1|BI074550 IP1_16_A11.g1_A002 Immature pannicle... 186 3e-046
gb|BI245815.1|BI245815 IP1_64_G05.g1_A002 Immature pannicle... 186 3e-046
gb|CD233339.1|CD233339 SS1_13_G11.b1_A012 Salt-stressed see... 186 3e-046
gb|CF071834.1|CF071834 FE1_19_D03.b1_A002 Iron-deficient se... 186 3e-046
gb|CF771740.1|CF771740 DSBF1_23_E06.g1_A010 Drought-stresse... 186 3e-046
gb|CN127278.1|CN127278 RHOH1_22_C03.b1_A002 Acid- and alkal... 186 3e-046
gb|CN128754.1|CN128754 RHOH1_31_H09.b1_A002 Acid- and alkal... 186 3e-046
gb|CN128917.1|CN128917 RHOH1_32_H10.b1_A002 Acid- and alkal... 186 3e-046
gb|CD219969.1|CD219969 CCC1_60_F06.b1_A007 Callus culture/c... 183 1e-045
gb|CF072959.1|CF072959 FE1_27_D01.b1_A002 Iron-deficient se... 183 2e-045
gb|CN134554.1|CN134554 OX1_27_C06.b1_A002 Oxidatively-stres... 181 6e-045
gb|BG101839.1|BG101839 RHIZ2_23_A10.g1_A003 Rhizome2 (RHIZ2... 181 9e-045
gb|BF480979.1|BF480979 FM1_15_G12.g1_A003 Floral-Induced Me... 180 1e-044
gb|BF481250.1|BF481250 FM1_17_E01.b1_A003 Floral-Induced Me... 180 1e-044
gb|BG933529.1|BG933529 WS1_4_E04.b1_A002 Water-stressed 1 (... 180 1e-044
gb|BI140990.1|BI140990 IP1_41_G10.b1_A002 Immature pannicle... 180 1e-044
gb|CW148395.1|CW148395 104_547_11141932_148_35011_016 Sorgh... 179 3e-044
gb|AW286294.1|AW286294 LG1_330_A01.g1_A002 Light Grown 1 (L... 179 3e-044
gb|CD423905.1|CD423905 SA1_2_G12.b1_A002 Salicylic acid-tre... 179 3e-044
gb|CF757235.1|CF757235 DSAF1_15_D07.g1_A011 Drought-stresse... 179 3e-044
gb|CD211868.1|CD211868 HS1_67_A05.b1_A012 Heat-shocked seed... 178 6e-044
gb|CX608205.1|CX608205 ANR1_37_F12.b1_A002 Anaerobic roots ... 177 8e-044
gb|CF072057.1|CF072057 FE1_20_C10.b1_A002 Iron-deficient se... 177 1e-043
gb|BE598541.1|BE598541 PI1_83_C07.g1_A002 Pathogen induced ... 167 1e-040
gb|CW413531.1|CW413531 fsbb001f112l18f0 Sorghum methylation... 166 3e-040
gb|BG948058.1|BG948058 IP1_8_G12.b1_A002 Immature pannicle ... 160 1e-038
gb|BF317903.1|BF317903 OV1_9_B10.b1_A002 Ovary 1 (OV1) Sorg... 156 1e-037
gb|BE918570.1|BE918570 OV1_8_E09.b1_A002 Ovary 1 (OV1) Sorg... 156 1e-037
gb|CL148486.1|CL148486 104_328_10593130_148_31782_254 Sorgh... 156 1e-037
gb|CW385345.1|CW385345 fsbb001f068m13k0 Sorghum methylation... 156 1e-037
gb|CN129574.1|CN129574 RHOH1_36_E05.b3_A002 Acid- and alkal... 156 2e-037
gb|BF585666.1|BF585666 FM1_24_B07.g1_A003 Floral-Induced Me... 156 2e-037
gb|BG239994.1|BG239994 OV1_31_F08.g1_A002 Ovary 1 (OV1) Sor... 156 2e-037
gb|CD227828.1|CD227828 CCC1_56_G02.b1_A007 Callus culture/c... 156 2e-037
gb|CX607839.1|CX607839 ANR1_31_C06.b1_A002 Anaerobic roots ... 156 2e-037
gb|AW282791.1|AW282791 LG1_290_D05.g1_A002 Light Grown 1 (L... 155 3e-037
gb|BI074880.1|BI074880 IP1_17_A09.g1_A002 Immature pannicle... 154 5e-037
gb|BF587843.1|BF587843 FM1_33_F03.g1_A003 Floral-Induced Me... 155 6e-037
gb|CL148485.1|CL148485 104_328_10593130_116_31783_254 Sorgh... 154 9e-037
gb|CF433645.1|CF433645 NIT1_28_F11.b1_A002 Nitrogen-deficie... 150 1e-035
gb|BF655935.1|BF655935 FM1_42_G12.g1_A003 Floral-Induced Me... 150 1e-035
gb|BG158738.1|BG158738 RHIZ2_44_F02.g1_A003 Rhizome2 (RHIZ2... 136 4e-034
gb|CL157592.1|CL157592 104_345_10783695_116_31478_255 Sorgh... 143 2e-033
gb|CL197184.1|CL197184 104_424_10943572_114_32383_016 Sorgh... 143 2e-033
gb|CW082277.1|CW082277 104_424_10943572_114_32334_016 Sorgh... 143 2e-033
gb|CW164547.1|CW164547 104_572_11152044_148_36463_038 Sorgh... 143 2e-033
gb|CW224629.1|CW224629 104_662_11203928_148_37201_032 Sorgh... 141 6e-033
gb|BG051983.1|BG051983 RHIZ2_7_D11.g1_A003 Rhizome2 (RHIZ2)... 140 2e-032
gb|BG241543.1|BG241543 RHIZ2_51_H04.g1_A003 Rhizome2 (RHIZ2... 140 2e-032
gb|BG465855.1|BG465855 RHIZ2_45_D07.g1_A003 Rhizome2 (RHIZ2... 138 4e-032
gb|BI212040.1|BI212040 IP1_63_G04.g1_A002 Immature pannicle... 136 3e-031
gb|BG240580.1|BG240580 OV1_31_F08.b1_A002 Ovary 1 (OV1) Sor... 135 4e-031
gb|BG412467.1|BG412467 OV2_34_E11.g1_A002 Ovary 2 (OV2) Sor... 135 5e-031
gb|CF430600.1|CF430600 NIT1_3_E06.b1_A002 Nitrogen-deficien... 131 9e-030
gb|BG241497.1|BG241497 RHIZ2_50_A08.g1_A003 Rhizome2 (RHIZ2... 130 2e-029
gb|BE917989.1|BE917989 OV1_8_E09.g1_A002 Ovary 1 (OV1) Sorg... 126 1e-028
gb|CW315000.1|CW315000 104_805_11472128_116_35818_018 Sorgh... 97 2e-026
gb|BE357339.1|BE357339 DG1_148_D12.g1_A002 Dark Grown 1 (DG... 118 7e-026
gb|CL157591.1|CL157591 104_345_10783695_114_31477_255 Sorgh... 117 9e-026
gb|BI099525.1|BI099525 IP1_43_D01.g1_A002 Immature pannicle... 116 2e-025
gb|BG051682.1|BG051682 FM1_60_A04.g1_A003 Floral-Induced Me... 113 2e-024
gb|CX618063.1|CX618063 GABR1_37_B05.g1_A002 GA- or brassino... 113 2e-024
gb|BF317768.1|BF317768 OV1_9_B10.g1_A002 Ovary 1 (OV1) Sorg... 111 5e-024
gb|CD427212.1|CD427212 SA1_18_E03.b1_A002 Salicylic acid-tr... 105 1e-023
gb|CW319522.1|CW319522 104_812_11474531_148_35892_046 Sorgh... 108 5e-023
gb|BE355115.1|BE355115 DG1_113_C09.g1_A002 Dark Grown 1 (DG... 107 6e-023
gb|CW481819.1|CW481819 fsbb001f241j14k0 Sorghum methylation... 108 7e-023
gb|BE126049.1|BE126049 DG1_65_G07.b1_A002 Dark Grown 1 (DG1... 106 3e-022
gb|CF073545.1|CF073545 FE1_10_F02.g1_A002 Iron-deficient se... 104 5e-022
gb|CD227257.1|CD227257 CCC1_50_D12.b1_A007 Callus culture/c... 104 6e-022
gb|CN132882.1|CN132882 OX1_8_F12.g1_A002 Oxidatively-stress... 101 6e-021
>gb|CF433456.1|CF433456 NIT1_27_E11.b1_A002 Nitrogen-deficient seedlings Sorghum bicolor
cDNA clone NIT1_27_E11_A002 3', mRNA sequence
Length = 553
Score = 217 bits (468), Expect(4) = 9e-062
Identities = 88/97 (90%), Positives = 89/97 (91%)
Frame = -2 / +1
Query: 489 SDAINNGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVIWSVLLASIFSLL 310
SDAINNGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVIWSVLLASIFSLL
Sbjct: 16 SDAINNGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVIWSVLLASIFSLL 195
Query: 309 WVRIDPFIVRTKGPDVRQCGINC*AAYHGSKKF*SLC 199
WVRIDPFIVRTKGPDVRQCGINC*A Y+ K C
Sbjct: 196 WVRIDPFIVRTKGPDVRQCGINC*AVYY*DSKNPGAC 306
Score = 201 bits (434), Expect(4) = 9e-059
Identities = 84/88 (95%), Positives = 84/88 (95%)
Frame = +2 / -3
Query: 227 **AAQQLMPHCLTSGPLVLTMKGSILTQSREKMEASSTDQMTTMVGVRFWRPMSPLRNG* 406
** AQQLMPHCLTSGP VLTMKGSILTQSREKMEASSTDQMTTMVGV FWRPMSPLRNG*
Sbjct: 278 **TAQQLMPHCLTSGPFVLTMKGSILTQSREKMEASSTDQMTTMVGVLFWRPMSPLRNG* 99
Query: 407 RWTMTQKAKKSLPKSGPHDWYPLLMASE 490
RWTMTQ AKKSLPKSGPHDWYPLLMASE
Sbjct: 98 RWTMTQNAKKSLPKSGPHDWYPLLMASE 15
Score = 124 bits (266), Expect(4) = 1e-036
Identities = 49/55 (89%), Positives = 50/55 (90%)
Frame = -1 / +3
Query: 394 QGAHGAPEPDAHHCRHLVRAAGLHLLPALGQDRSLHRQDQGARRQAVWHQLLSCL 230
QGAHGAPE DAHHC HLVRAAGLHLLPALGQDR LHRQD+G RQAVWHQLLSCL
Sbjct: 111 QGAHGAPEQDAHHCCHLVRAAGLHLLPALGQDRPLHRQDKGPGRQAVWHQLLSCL 275
Score = 31.8 bits (63), Expect(4) = 1e-036
Identities = 15/23 (65%), Positives = 15/23 (65%)
Frame = -1 / +3
Query: 232 LSRFKKVLELVHREKQQFRNFVL 164
L RFKK L KQQFRNFVL
Sbjct: 276 LLRFKKSWSLCIGRKQQFRNFVL 344
Score = 31.8 bits (63), Expect(4) = 9e-059
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = +3 / -1
Query: 162 DNTKFLNCCFSLCTSSRTFLN 224
+NTKFLNCCF + FLN
Sbjct: 346 NNTKFLNCCFLPMHKLQDFLN 284
Score = 28.6 bits (56), Expect(4) = 9e-059
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = +2 / -2
Query: 68 IQTLSFVQFLVR 103
IQTLSFVQFLVR
Sbjct: 441 IQTLSFVQFLVR 406
Score = 27.2 bits (53), Expect(4) = 9e-062
Identities = 10/11 (90%), Positives = 11/11 (100%)
Frame = -1 / +1
Query: 100 DEELNKGQGLN 68
DEELNKGQGL+
Sbjct: 409 DEELNKGQGLD 441
Score = 26.7 bits (52), Expect(4) = 1e-036
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = -3 / +3
Query: 101 GRGIEQRTRF 72
GRGIEQRTRF
Sbjct: 408 GRGIEQRTRF 437
Score = 26.7 bits (52), Expect(4) = 9e-062
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = -1 / +2
Query: 226 RFKKVLELVHREKQQFRNFVL 164
+ +K+LELVHREK F +
Sbjct: 281 KIQKILELVHREKTTI*KFCI 343
Score = 26.3 bits (51), Expect(4) = 1e-036
Identities = 10/11 (90%), Positives = 11/11 (100%)
Frame = -1 / +3
Query: 469 VPVVGPALRQA 437
VPV+GPALRQA
Sbjct: 36 VPVMGPALRQA 68
Score = 23.5 bits (45), Expect(4) = 9e-062
Identities = 8/10 (80%), Positives = 10/10 (100%)
Frame = -2 / +3
Query: 129 NVLGPRIVGR 100
++LGPRIVGR
Sbjct: 384 HILGPRIVGR 413
Score = 22.6 bits (43), Expect(4) = 9e-059
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +2 / -1
Query: 101 RPTILGPR 124
RPTILGPR
Sbjct: 412 RPTILGPR 389
>gb|CL167975.1|CL167975 104_365_10810478_116_31805_158 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10810478, DNA
sequence
Length = 638
Score = 217 bits (468), Expect(4) = 1e-061
Identities = 88/97 (90%), Positives = 89/97 (91%)
Frame = -2 / -2
Query: 489 SDAINNGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVIWSVLLASIFSLL 310
SDAINNGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVIWSVLLASIFSLL
Sbjct: 604 SDAINNGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVIWSVLLASIFSLL 425
Query: 309 WVRIDPFIVRTKGPDVRQCGINC*AAYHGSKKF*SLC 199
WVRIDPFIVRTKGPDVRQCGINC*A Y+ K C
Sbjct: 424 WVRIDPFIVRTKGPDVRQCGINC*AVYY*DSKNPGAC 314
Score = 201 bits (434), Expect(4) = 1e-058
Identities = 84/88 (95%), Positives = 84/88 (95%)
Frame = +2 / +3
Query: 227 **AAQQLMPHCLTSGPLVLTMKGSILTQSREKMEASSTDQMTTMVGVRFWRPMSPLRNG* 406
** AQQLMPHCLTSGP VLTMKGSILTQSREKMEASSTDQMTTMVGV FWRPMSPLRNG*
Sbjct: 342 **TAQQLMPHCLTSGPFVLTMKGSILTQSREKMEASSTDQMTTMVGVLFWRPMSPLRNG* 521
Query: 407 RWTMTQKAKKSLPKSGPHDWYPLLMASE 490
RWTMTQ AKKSLPKSGPHDWYPLLMASE
Sbjct: 522 RWTMTQNAKKSLPKSGPHDWYPLLMASE 605
Score = 124 bits (266), Expect(4) = 1e-036
Identities = 49/55 (89%), Positives = 50/55 (90%)
Frame = -1 / -1
Query: 394 QGAHGAPEPDAHHCRHLVRAAGLHLLPALGQDRSLHRQDQGARRQAVWHQLLSCL 230
QGAHGAPE DAHHC HLVRAAGLHLLPALGQDR LHRQD+G RQAVWHQLLSCL
Sbjct: 509 QGAHGAPEQDAHHCCHLVRAAGLHLLPALGQDRPLHRQDKGPGRQAVWHQLLSCL 345
Score = 31.8 bits (63), Expect(4) = 1e-036
Identities = 15/23 (65%), Positives = 15/23 (65%)
Frame = -1 / -1
Query: 232 LSRFKKVLELVHREKQQFRNFVL 164
L RFKK L KQQFRNFVL
Sbjct: 344 LLRFKKSWSLCIGRKQQFRNFVL 276
Score = 31.8 bits (63), Expect(4) = 1e-058
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = +3 / +1
Query: 162 DNTKFLNCCFSLCTSSRTFLN 224
+NTKFLNCCF + FLN
Sbjct: 274 NNTKFLNCCFLPMHKLQDFLN 336
Score = 28.6 bits (56), Expect(4) = 1e-058
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = +2 / +2
Query: 68 IQTLSFVQFLVR 103
IQTLSFVQFLVR
Sbjct: 179 IQTLSFVQFLVR 214
Score = 27.2 bits (53), Expect(4) = 1e-061
Identities = 10/11 (90%), Positives = 11/11 (100%)
Frame = -1 / -2
Query: 100 DEELNKGQGLN 68
DEELNKGQGL+
Sbjct: 211 DEELNKGQGLD 179
Score = 26.7 bits (52), Expect(4) = 1e-036
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = -3 / -1
Query: 101 GRGIEQRTRF 72
GRGIEQRTRF
Sbjct: 212 GRGIEQRTRF 183
Score = 26.7 bits (52), Expect(4) = 1e-061
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = -1 / -3
Query: 226 RFKKVLELVHREKQQFRNFVL 164
+ +K+LELVHREK F +
Sbjct: 339 KIQKILELVHREKTTI*KFCI 277
Score = 26.3 bits (51), Expect(4) = 1e-036
Identities = 10/11 (90%), Positives = 11/11 (100%)
Frame = -1 / -1
Query: 469 VPVVGPALRQA 437
VPV+GPALRQA
Sbjct: 584 VPVMGPALRQA 552
Score = 23.5 bits (45), Expect(4) = 1e-061
Identities = 8/10 (80%), Positives = 10/10 (100%)
Frame = -2 / -1
Query: 129 NVLGPRIVGR 100
++LGPRIVGR
Sbjct: 236 HILGPRIVGR 207
Score = 22.6 bits (43), Expect(4) = 1e-058
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +2 / +1
Query: 101 RPTILGPR 124
RPTILGPR
Sbjct: 208 RPTILGPR 231
>gb|CF429881.1|CF429881 PH1_25_C04.b1_A002 Phosphorous-deficient seedlings Sorghum bicolor
cDNA clone PH1_25_C04_A002 3', mRNA sequence
Length = 553
Score = 211 bits (455), Expect(4) = 5e-060
Identities = 86/97 (88%), Positives = 87/97 (89%)
Frame = -2 / +2
Query: 489 SDAINNGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVIWSVLLASIFSLL 310
SDAINN YQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVV WSVLLASIFSLL
Sbjct: 125 SDAINNVYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVFWSVLLASIFSLL 304
Query: 309 WVRIDPFIVRTKGPDVRQCGINC*AAYHGSKKF*SLC 199
WVRIDPFIVRTKGPDVRQCGINC*A Y+ K C
Sbjct: 305 WVRIDPFIVRTKGPDVRQCGINC*AVYY*DSKNPGAC 415
Score = 195 bits (420), Expect(4) = 7e-057
Identities = 82/88 (93%), Positives = 82/88 (93%)
Frame = +2 / -2
Query: 227 **AAQQLMPHCLTSGPLVLTMKGSILTQSREKMEASSTDQMTTMVGVRFWRPMSPLRNG* 406
** AQQLMPHCLTSGP VLTMKGSILTQSREKMEASSTDQ TTMVGV FWRPMSPLRNG*
Sbjct: 387 **TAQQLMPHCLTSGPFVLTMKGSILTQSREKMEASSTDQKTTMVGVLFWRPMSPLRNG* 208
Query: 407 RWTMTQKAKKSLPKSGPHDWYPLLMASE 490
RWTMTQ AKKSLPKSGPHDWY LLMASE
Sbjct: 207 RWTMTQNAKKSLPKSGPHDWYTLLMASE 124
Score = 119 bits (255), Expect(4) = 3e-035
Identities = 48/55 (87%), Positives = 49/55 (89%)
Frame = -1 / +1
Query: 394 QGAHGAPEPDAHHCRHLVRAAGLHLLPALGQDRSLHRQDQGARRQAVWHQLLSCL 230
QGAHGAPE DAHHC LVRAAGLHLLPALGQDR LHRQD+G RQAVWHQLLSCL
Sbjct: 220 QGAHGAPEQDAHHCCLLVRAAGLHLLPALGQDRPLHRQDKGPGRQAVWHQLLSCL 384
Score = 31.8 bits (63), Expect(4) = 3e-035
Identities = 15/23 (65%), Positives = 15/23 (65%)
Frame = -1 / +1
Query: 232 LSRFKKVLELVHREKQQFRNFVL 164
L RFKK L KQQFRNFVL
Sbjct: 385 LLRFKKSWSLCIGRKQQFRNFVL 453
Score = 31.8 bits (63), Expect(4) = 7e-057
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = +3 / -3
Query: 162 DNTKFLNCCFSLCTSSRTFLN 224
+NTKFLNCCF + FLN
Sbjct: 455 NNTKFLNCCFLPMHKLQDFLN 393
Score = 28.6 bits (56), Expect(4) = 7e-057
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = +2 / -1
Query: 68 IQTLSFVQFLVR 103
IQTLSFVQFLVR
Sbjct: 550 IQTLSFVQFLVR 515
Score = 27.2 bits (53), Expect(4) = 5e-060
Identities = 10/11 (90%), Positives = 11/11 (100%)
Frame = -1 / +2
Query: 100 DEELNKGQGLN 68
DEELNKGQGL+
Sbjct: 518 DEELNKGQGLD 550
Score = 26.7 bits (52), Expect(4) = 3e-035
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = -3 / +1
Query: 101 GRGIEQRTRF 72
GRGIEQRTRF
Sbjct: 517 GRGIEQRTRF 546
Score = 26.7 bits (52), Expect(4) = 5e-060
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = -1 / +3
Query: 226 RFKKVLELVHREKQQFRNFVL 164
+ +K+LELVHREK F +
Sbjct: 390 KIQKILELVHREKTTI*KFCI 452
Score = 26.3 bits (51), Expect(4) = 3e-035
Identities = 10/11 (90%), Positives = 11/11 (100%)
Frame = -1 / +1
Query: 469 VPVVGPALRQA 437
VPV+GPALRQA
Sbjct: 145 VPVMGPALRQA 177
Score = 23.5 bits (45), Expect(4) = 5e-060
Identities = 8/10 (80%), Positives = 10/10 (100%)
Frame = -2 / +1
Query: 129 NVLGPRIVGR 100
++LGPRIVGR
Sbjct: 493 HILGPRIVGR 522
Score = 22.6 bits (43), Expect(4) = 7e-057
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +2 / -3
Query: 101 RPTILGPR 124
RPTILGPR
Sbjct: 521 RPTILGPR 498
>gb|CL167974.1|CL167974 104_365_10810478_114_31804_158 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10810478, DNA
sequence
Length = 777
Score = 217 bits (468), Expect(3) = 5e-059
Identities = 88/97 (90%), Positives = 89/97 (91%)
Frame = -2 / +2
Query: 489 SDAINNGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVIWSVLLASIFSLL 310
SDAINNGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVIWSVLLASIFSLL
Sbjct: 365 SDAINNGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVIWSVLLASIFSLL 544
Query: 309 WVRIDPFIVRTKGPDVRQCGINC*AAYHGSKKF*SLC 199
WVRIDPFIVRTKGPDVRQCGINC*A Y+ K C
Sbjct: 545 WVRIDPFIVRTKGPDVRQCGINC*AVYY*DSKNPGAC 655
Score = 201 bits (434), Expect(3) = 1e-055
Identities = 84/88 (95%), Positives = 84/88 (95%)
Frame = +2 / -1
Query: 227 **AAQQLMPHCLTSGPLVLTMKGSILTQSREKMEASSTDQMTTMVGVRFWRPMSPLRNG* 406
** AQQLMPHCLTSGP VLTMKGSILTQSREKMEASSTDQMTTMVGV FWRPMSPLRNG*
Sbjct: 627 **TAQQLMPHCLTSGPFVLTMKGSILTQSREKMEASSTDQMTTMVGVLFWRPMSPLRNG* 448
Query: 407 RWTMTQKAKKSLPKSGPHDWYPLLMASE 490
RWTMTQ AKKSLPKSGPHDWYPLLMASE
Sbjct: 447 RWTMTQNAKKSLPKSGPHDWYPLLMASE 364
Score = 124 bits (266), Expect(3) = 7e-034
Identities = 49/55 (89%), Positives = 50/55 (90%)
Frame = -1 / +1
Query: 394 QGAHGAPEPDAHHCRHLVRAAGLHLLPALGQDRSLHRQDQGARRQAVWHQLLSCL 230
QGAHGAPE DAHHC HLVRAAGLHLLPALGQDR LHRQD+G RQAVWHQLLSCL
Sbjct: 460 QGAHGAPEQDAHHCCHLVRAAGLHLLPALGQDRPLHRQDKGPGRQAVWHQLLSCL 624
Score = 31.8 bits (63), Expect(3) = 7e-034
Identities = 15/23 (65%), Positives = 15/23 (65%)
Frame = -1 / +1
Query: 232 LSRFKKVLELVHREKQQFRNFVL 164
L RFKK L KQQFRNFVL
Sbjct: 625 LLRFKKSWSLCIGRKQQFRNFVL 693
Score = 31.8 bits (63), Expect(3) = 1e-055
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = +3 / -2
Query: 162 DNTKFLNCCFSLCTSSRTFLN 224
+NTKFLNCCF + FLN
Sbjct: 695 NNTKFLNCCFLPMHKLQDFLN 633
Score = 26.7 bits (52), Expect(3) = 5e-059
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = -1 / +3
Query: 226 RFKKVLELVHREKQQFRNFVL 164
+ +K+LELVHREK F +
Sbjct: 630 KIQKILELVHREKTTI*KFCI 692
Score = 26.3 bits (51), Expect(3) = 7e-034
Identities = 10/11 (90%), Positives = 11/11 (100%)
Frame = -1 / +1
Query: 469 VPVVGPALRQA 437
VPV+GPALRQA
Sbjct: 385 VPVMGPALRQA 417
Score = 23.5 bits (45), Expect(3) = 5e-059
Identities = 8/10 (80%), Positives = 10/10 (100%)
Frame = -2 / +1
Query: 129 NVLGPRIVGR 100
++LGPRIVGR
Sbjct: 733 HILGPRIVGR 762
Score = 22.6 bits (43), Expect(3) = 1e-055
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +2 / -2
Query: 101 RPTILGPR 124
RPTILGPR
Sbjct: 761 RPTILGPR 738
>gb|CW031320.1|CW031320 104_259_10500738_116_30398 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10500738, DNA
sequence
Length = 854
Score = 217 bits (468), Expect(2) = 1e-057
Identities = 88/97 (90%), Positives = 89/97 (91%)
Frame = -2 / -3
Query: 489 SDAINNGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVIWSVLLASIFSLL 310
SDAINNGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVIWSVLLASIFSLL
Sbjct: 372 SDAINNGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVIWSVLLASIFSLL 193
Query: 309 WVRIDPFIVRTKGPDVRQCGINC*AAYHGSKKF*SLC 199
WVRIDPFIVRTKGPDVRQCGINC*A Y+ K C
Sbjct: 192 WVRIDPFIVRTKGPDVRQCGINC*AVYY*DSKNPGAC 82
Score = 201 bits (434), Expect(2) = 2e-054
Identities = 84/88 (95%), Positives = 84/88 (95%)
Frame = +2 / +2
Query: 227 **AAQQLMPHCLTSGPLVLTMKGSILTQSREKMEASSTDQMTTMVGVRFWRPMSPLRNG* 406
** AQQLMPHCLTSGP VLTMKGSILTQSREKMEASSTDQMTTMVGV FWRPMSPLRNG*
Sbjct: 110 **TAQQLMPHCLTSGPFVLTMKGSILTQSREKMEASSTDQMTTMVGVLFWRPMSPLRNG* 289
Query: 407 RWTMTQKAKKSLPKSGPHDWYPLLMASE 490
RWTMTQ AKKSLPKSGPHDWYPLLMASE
Sbjct: 290 RWTMTQNAKKSLPKSGPHDWYPLLMASE 373
Score = 124 bits (266), Expect(3) = 7e-034
Identities = 49/55 (89%), Positives = 50/55 (90%)
Frame = -1 / -2
Query: 394 QGAHGAPEPDAHHCRHLVRAAGLHLLPALGQDRSLHRQDQGARRQAVWHQLLSCL 230
QGAHGAPE DAHHC HLVRAAGLHLLPALGQDR LHRQD+G RQAVWHQLLSCL
Sbjct: 277 QGAHGAPEQDAHHCCHLVRAAGLHLLPALGQDRPLHRQDKGPGRQAVWHQLLSCL 113
Score = 31.8 bits (63), Expect(3) = 7e-034
Identities = 15/23 (65%), Positives = 15/23 (65%)
Frame = -1 / -2
Query: 232 LSRFKKVLELVHREKQQFRNFVL 164
L RFKK L KQQFRNFVL
Sbjct: 112 LLRFKKSWSLCIGRKQQFRNFVL 44
Score = 31.8 bits (63), Expect(2) = 2e-054
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = +3 / +3
Query: 162 DNTKFLNCCFSLCTSSRTFLN 224
+NTKFLNCCF + FLN
Sbjct: 42 NNTKFLNCCFLPMHKLQDFLN 104
Score = 26.7 bits (52), Expect(2) = 1e-057
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = -1 / -1
Query: 226 RFKKVLELVHREKQQFRNFVL 164
+ +K+LELVHREK F +
Sbjct: 107 KIQKILELVHREKTTI*KFCI 45
Score = 26.3 bits (51), Expect(3) = 7e-034
Identities = 10/11 (90%), Positives = 11/11 (100%)
Frame = -1 / -2
Query: 469 VPVVGPALRQA 437
VPV+GPALRQA
Sbjct: 352 VPVMGPALRQA 320
>gb|CW315001.1|CW315001 104_805_11472128_148_35822_018 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11472128, DNA
sequence
Length = 685
Score = 217 bits (468), Expect(2) = 1e-057
Identities = 88/97 (90%), Positives = 89/97 (91%)
Frame = -2 / +1
Query: 489 SDAINNGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVIWSVLLASIFSLL 310
SDAINNGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVIWSVLLASIFSLL
Sbjct: 325 SDAINNGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVIWSVLLASIFSLL 504
Query: 309 WVRIDPFIVRTKGPDVRQCGINC*AAYHGSKKF*SLC 199
WVRIDPFIVRTKGPDVRQCGINC*A Y+ K C
Sbjct: 505 WVRIDPFIVRTKGPDVRQCGINC*AVYY*DSKNPGAC 615
Score = 201 bits (434), Expect(2) = 2e-054
Identities = 84/88 (95%), Positives = 84/88 (95%)
Frame = +2 / -3
Query: 227 **AAQQLMPHCLTSGPLVLTMKGSILTQSREKMEASSTDQMTTMVGVRFWRPMSPLRNG* 406
** AQQLMPHCLTSGP VLTMKGSILTQSREKMEASSTDQMTTMVGV FWRPMSPLRNG*
Sbjct: 587 **TAQQLMPHCLTSGPFVLTMKGSILTQSREKMEASSTDQMTTMVGVLFWRPMSPLRNG* 408
Query: 407 RWTMTQKAKKSLPKSGPHDWYPLLMASE 490
RWTMTQ AKKSLPKSGPHDWYPLLMASE
Sbjct: 407 RWTMTQNAKKSLPKSGPHDWYPLLMASE 324
Score = 124 bits (266), Expect(3) = 7e-034
Identities = 49/55 (89%), Positives = 50/55 (90%)
Frame = -1 / +3
Query: 394 QGAHGAPEPDAHHCRHLVRAAGLHLLPALGQDRSLHRQDQGARRQAVWHQLLSCL 230
QGAHGAPE DAHHC HLVRAAGLHLLPALGQDR LHRQD+G RQAVWHQLLSCL
Sbjct: 420 QGAHGAPEQDAHHCCHLVRAAGLHLLPALGQDRPLHRQDKGPGRQAVWHQLLSCL 584
Score = 31.8 bits (63), Expect(3) = 7e-034
Identities = 15/23 (65%), Positives = 15/23 (65%)
Frame = -1 / +3
Query: 232 LSRFKKVLELVHREKQQFRNFVL 164
L RFKK L KQQFRNFVL
Sbjct: 585 LLRFKKSWSLCIGRKQQFRNFVL 653
Score = 31.8 bits (63), Expect(2) = 2e-054
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = +3 / -1
Query: 162 DNTKFLNCCFSLCTSSRTFLN 224
+NTKFLNCCF + FLN
Sbjct: 655 NNTKFLNCCFLPMHKLQDFLN 593
Score = 26.7 bits (52), Expect(2) = 1e-057
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = -1 / +2
Query: 226 RFKKVLELVHREKQQFRNFVL 164
+ +K+LELVHREK F +
Sbjct: 590 KIQKILELVHREKTTI*KFCI 652
Score = 26.3 bits (51), Expect(3) = 7e-034
Identities = 10/11 (90%), Positives = 11/11 (100%)
Frame = -1 / +3
Query: 469 VPVVGPALRQA 437
VPV+GPALRQA
Sbjct: 345 VPVMGPALRQA 377
>gb|CW235188.1|CW235188 104_690_11214849_116_37409_041 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11214849, DNA
sequence
Length = 601
Score = 217 bits (468), Expect = 1e-055
Identities = 88/97 (90%), Positives = 89/97 (91%)
Frame = -2 / -2
Query: 489 SDAINNGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVIWSVLLASIFSLL 310
SDAINNGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVIWSVLLASIFSLL
Sbjct: 291 SDAINNGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVIWSVLLASIFSLL 112
Query: 309 WVRIDPFIVRTKGPDVRQCGINC*AAYHGSKKF*SLC 199
WVRIDPFIVRTKGPDVRQCGINC*A Y+ K C
Sbjct: 111 WVRIDPFIVRTKGPDVRQCGINC*AVYY*DSKNPGAC 1
Score = 201 bits (434), Expect = 5e-051
Identities = 84/88 (95%), Positives = 84/88 (95%)
Frame = +2 / +2
Query: 227 **AAQQLMPHCLTSGPLVLTMKGSILTQSREKMEASSTDQMTTMVGVRFWRPMSPLRNG* 406
** AQQLMPHCLTSGP VLTMKGSILTQSREKMEASSTDQMTTMVGV FWRPMSPLRNG*
Sbjct: 29 **TAQQLMPHCLTSGPFVLTMKGSILTQSREKMEASSTDQMTTMVGVLFWRPMSPLRNG* 208
Query: 407 RWTMTQKAKKSLPKSGPHDWYPLLMASE 490
RWTMTQ AKKSLPKSGPHDWYPLLMASE
Sbjct: 209 RWTMTQNAKKSLPKSGPHDWYPLLMASE 292
Score = 124 bits (266), Expect(2) = 8e-030
Identities = 49/55 (89%), Positives = 50/55 (90%)
Frame = -1 / -1
Query: 394 QGAHGAPEPDAHHCRHLVRAAGLHLLPALGQDRSLHRQDQGARRQAVWHQLLSCL 230
QGAHGAPE DAHHC HLVRAAGLHLLPALGQDR LHRQD+G RQAVWHQLLSCL
Sbjct: 196 QGAHGAPEQDAHHCCHLVRAAGLHLLPALGQDRPLHRQDKGPGRQAVWHQLLSCL 32
Score = 26.3 bits (51), Expect(2) = 8e-030
Identities = 10/11 (90%), Positives = 11/11 (100%)
Frame = -1 / -1
Query: 469 VPVVGPALRQA 437
VPV+GPALRQA
Sbjct: 271 VPVMGPALRQA 239
>gb|BF420934.1|BF420934 FM1_5_B03.g1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 259
Score = 199 bits (430), Expect = 2e-050
Identities = 80/81 (98%), Positives = 80/81 (98%)
Frame = -2 / +1
Query: 489 SDAINNGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVIWSVLLASIFSLL 310
S AINNGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVIWSVLLASIFSLL
Sbjct: 7 SHAINNGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVIWSVLLASIFSLL 186
Query: 309 WVRIDPFIVRTKGPDVRQCGI 247
WVRIDPFIVRTKGPDVRQCGI
Sbjct: 187 WVRIDPFIVRTKGPDVRQCGI 249
Score = 182 bits (393), Expect = 2e-045
Identities = 76/82 (92%), Positives = 76/82 (92%)
Frame = +2 / -3
Query: 245 LMPHCLTSGPLVLTMKGSILTQSREKMEASSTDQMTTMVGVRFWRPMSPLRNG*RWTMTQ 424
LMPHCLTSGP VLTMKGSILTQSREKMEASSTDQMTTMVGV F RPMSPLRNG*RWTMTQ
Sbjct: 251 LMPHCLTSGPFVLTMKGSILTQSREKMEASSTDQMTTMVGVLFCRPMSPLRNG*RWTMTQ 72
Query: 425 KAKKSLPKSGPHDWYPLLMASE 490
AKKSLPK GPHDWYPLLMA E
Sbjct: 71 NAKKSLPKRGPHDWYPLLMAWE 6
Score = 107 bits (228), Expect(2) = 3e-023
Identities = 42/50 (84%), Positives = 43/50 (86%)
Frame = -1 / +3
Query: 394 QGAHGAPEPDAHHCRHLVRAAGLHLLPALGQDRSLHRQDQGARRQAVWHQ 245
QGAHG E DAHHC HLVRAAGLHLLPALGQDR LHRQD+G RQAVWHQ
Sbjct: 102 QGAHGPAEQDAHHCCHLVRAAGLHLLPALGQDRPLHRQDKGPGRQAVWHQ 251
Score = 20.3 bits (38), Expect(2) = 3e-023
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = -1 / +3
Query: 469 VPVVGPALRQA 437
VPV+G LRQA
Sbjct: 27 VPVMGTPLRQA 59
>gb|AW283377.1|AW283377 LG1_223_D12.g1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 574
Score = 186 bits (400), Expect = 3e-046
Identities = 73/96 (76%), Positives = 82/96 (85%)
Frame = -2 / +3
Query: 489 SDAINNGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVIWSVLLASIFSLL 310
SDA+NNGY SWGPLFGKLFF+FWVIVHLYPFLKGLMGRQNRTPTIVV+WS+LLASIFSL+
Sbjct: 102 SDAVNNGYGSWGPLFGKLFFSFWVIVHLYPFLKGLMGRQNRTPTIVVLWSILLASIFSLV 281
Query: 309 WVRIDPFIVRTKGPDVRQCGINC*AAYHGSKKF*SL 202
WVRIDPFI + KGP ++ CG+ C* Y S SL
Sbjct: 282 WVRIDPFIPKAKGPILKPCGVEC*YEYDRSASSPSL 389
Score = 135 bits (289), Expect = 5e-031
Identities = 59/84 (70%), Positives = 62/84 (73%)
Frame = +2 / -1
Query: 239 QQLMPHCLTSGPLVLTMKGSILTQSREKMEASSTDQMTTMVGVRFWRPMSPLRNG*RWTM 418
Q PH L GPL MKGSILTQ+ EKMEA DQ TTMVGVRF P+ PLRNG RWTM
Sbjct: 352 QHSTPHGLRMGPLAFGMKGSILTQTSEKMEARRMDQSTTMVGVRFCLPIRPLRNGYRWTM 173
Query: 419 TQKAKKSLPKSGPHDWYPLLMASE 490
TQK KKSLP SGPH+ YPLL ASE
Sbjct: 172 TQKEKKSLPNSGPHEPYPLLTASE 101
>gb|BG103131.1|BG103131 RHIZ2_18_E07.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 669
Score = 186 bits (400), Expect = 3e-046
Identities = 72/84 (85%), Positives = 77/84 (91%)
Frame = -2 / +1
Query: 489 SDAINNGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVIWSVLLASIFSLL 310
S AIN+GYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVV+W++LLASIFSLL
Sbjct: 319 SYAINSGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVVWAILLASIFSLL 498
Query: 309 WVRIDPFIVRTKGPDVRQCGINC* 238
WVRIDPF R GPD + CGINC*
Sbjct: 499 WVRIDPFTTRVTGPDTQTCGINC* 570
Score = 127 bits (271), Expect = 2e-028
Identities = 54/83 (65%), Positives = 64/83 (77%)
Frame = +2 / -2
Query: 242 QLMPHCLTSGPLVLTMKGSILTQSREKMEASSTDQMTTMVGVRFWRPMSPLRNG*RWTMT 421
QLMPH SGP+ + GS+ T S+EK++A+ Q TTMVGVRF RPM PLRNG + T+T
Sbjct: 566 QLMPHV*VSGPVTRVVNGSMRTHSKEKIDANRIAQTTTMVGVRFCRPMRPLRNGYKCTIT 387
Query: 422 QKAKKSLPKSGPHDWYPLLMASE 490
QKAKKSLPKSGPHDW PLL+A E
Sbjct: 386 QKAKKSLPKSGPHDW*PLLIA*E 318
>gb|BG557221.1|BG557221 EM1_44_B10.g1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 608
Score = 186 bits (400), Expect = 3e-046
Identities = 72/84 (85%), Positives = 77/84 (91%)
Frame = -2 / +1
Query: 489 SDAINNGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVIWSVLLASIFSLL 310
S AIN+GYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVV+W++LLASIFSLL
Sbjct: 112 SYAINSGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVVWAILLASIFSLL 291
Query: 309 WVRIDPFIVRTKGPDVRQCGINC* 238
WVRIDPF R GPD + CGINC*
Sbjct: 292 WVRIDPFTTRVTGPDTQTCGINC* 363
Score = 127 bits (271), Expect = 2e-028
Identities = 54/83 (65%), Positives = 64/83 (77%)
Frame = +2 / -1
Query: 242 QLMPHCLTSGPLVLTMKGSILTQSREKMEASSTDQMTTMVGVRFWRPMSPLRNG*RWTMT 421
QLMPH SGP+ + GS+ T S+EK++A+ Q TTMVGVRF RPM PLRNG + T+T
Sbjct: 359 QLMPHV*VSGPVTRVVNGSMRTHSKEKIDANRIAQTTTMVGVRFCRPMRPLRNGYKCTIT 180
Query: 422 QKAKKSLPKSGPHDWYPLLMASE 490
QKAKKSLPKSGPHDW PLL+A E
Sbjct: 179 QKAKKSLPKSGPHDW*PLLIA*E 111
>gb|BG947765.1|BG947765 IP1_8_G12.g1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 597
Score = 186 bits (400), Expect = 3e-046
Identities = 73/96 (76%), Positives = 82/96 (85%)
Frame = -2 / +3
Query: 489 SDAINNGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVIWSVLLASIFSLL 310
SDA+NNGY SWGPLFGKLFF+FWVIVHLYPFLKGLMGRQNRTPTIVV+WS+LLASIFSL+
Sbjct: 117 SDAVNNGYGSWGPLFGKLFFSFWVIVHLYPFLKGLMGRQNRTPTIVVLWSILLASIFSLV 296
Query: 309 WVRIDPFIVRTKGPDVRQCGINC*AAYHGSKKF*SL 202
WVRIDPFI + KGP ++ CG+ C* Y S SL
Sbjct: 297 WVRIDPFIPKAKGPILKPCGVEC*YEYDRSASSPSL 404
Score = 135 bits (289), Expect = 5e-031
Identities = 59/84 (70%), Positives = 62/84 (73%)
Frame = +2 / -3
Query: 239 QQLMPHCLTSGPLVLTMKGSILTQSREKMEASSTDQMTTMVGVRFWRPMSPLRNG*RWTM 418
Q PH L GPL MKGSILTQ+ EKMEA DQ TTMVGVRF P+ PLRNG RWTM
Sbjct: 367 QHSTPHGLRMGPLAFGMKGSILTQTSEKMEARRMDQSTTMVGVRFCLPIRPLRNGYRWTM 188
Query: 419 TQKAKKSLPKSGPHDWYPLLMASE 490
TQK KKSLP SGPH+ YPLL ASE
Sbjct: 187 TQKEKKSLPNSGPHEPYPLLTASE 116
>gb|BI074550.1|BI074550 IP1_16_A11.g1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 599
Score = 186 bits (400), Expect = 3e-046
Identities = 73/96 (76%), Positives = 82/96 (85%)
Frame = -2 / +2
Query: 489 SDAINNGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVIWSVLLASIFSLL 310
SDA+NNGY SWGPLFGKLFF+FWVIVHLYPFLKGLMGRQNRTPTIVV+WS+LLASIFSL+
Sbjct: 119 SDAVNNGYGSWGPLFGKLFFSFWVIVHLYPFLKGLMGRQNRTPTIVVLWSILLASIFSLV 298
Query: 309 WVRIDPFIVRTKGPDVRQCGINC*AAYHGSKKF*SL 202
WVRIDPFI + KGP ++ CG+ C* Y S SL
Sbjct: 299 WVRIDPFIPKAKGPILKPCGVEC*YEYDRSASSPSL 406
Score = 135 bits (289), Expect = 5e-031
Identities = 59/84 (70%), Positives = 62/84 (73%)
Frame = +2 / -3
Query: 239 QQLMPHCLTSGPLVLTMKGSILTQSREKMEASSTDQMTTMVGVRFWRPMSPLRNG*RWTM 418
Q PH L GPL MKGSILTQ+ EKMEA DQ TTMVGVRF P+ PLRNG RWTM
Sbjct: 369 QHSTPHGLRMGPLAFGMKGSILTQTSEKMEARRMDQSTTMVGVRFCLPIRPLRNGYRWTM 190
Query: 419 TQKAKKSLPKSGPHDWYPLLMASE 490
TQK KKSLP SGPH+ YPLL ASE
Sbjct: 189 TQKEKKSLPNSGPHEPYPLLTASE 118
>gb|BI245815.1|BI245815 IP1_64_G05.g1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 616
Score = 186 bits (400), Expect = 3e-046
Identities = 72/84 (85%), Positives = 77/84 (91%)
Frame = -2 / +3
Query: 489 SDAINNGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVIWSVLLASIFSLL 310
S AIN+GYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVV+W++LLASIFSLL
Sbjct: 96 SYAINSGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVVWAILLASIFSLL 275
Query: 309 WVRIDPFIVRTKGPDVRQCGINC* 238
WVRIDPF R GPD + CGINC*
Sbjct: 276 WVRIDPFTTRVTGPDTQTCGINC* 347
Score = 120 bits (256), Expect = 2e-026
Identities = 53/83 (63%), Positives = 63/83 (75%)
Frame = +2 / -1
Query: 242 QLMPHCLTSGPLVLTMKGSILTQSREKMEASSTDQMTTMVGVRFWRPMSPLRNG*RWTMT 421
QLMPH SGP+ + GS+ T S+EK++A+ Q TTMVGVRF RPM PLRNG + T+T
Sbjct: 343 QLMPHV*VSGPVTRVVNGSMRTHSKEKIDANRIAQTTTMVGVRFCRPMRPLRNGYKCTIT 164
Query: 422 QKAKKSLPKSGPHDWYPLLMASE 490
QKAKKSLPKSGPHD PLL+A E
Sbjct: 163 QKAKKSLPKSGPHD**PLLIA*E 95
>gb|CD233339.1|CD233339 SS1_13_G11.b1_A012 Salt-stressed seedlings Sorghum bicolor cDNA
clone SS1_13_G11_A012 3', mRNA sequence
Length = 616
Score = 186 bits (400), Expect = 3e-046
Identities = 72/84 (85%), Positives = 77/84 (91%)
Frame = -2 / +1
Query: 489 SDAINNGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVIWSVLLASIFSLL 310
S AIN+GYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVV+W++LLASIFSLL
Sbjct: 94 SYAINSGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVVWAILLASIFSLL 273
Query: 309 WVRIDPFIVRTKGPDVRQCGINC* 238
WVRIDPF R GPD + CGINC*
Sbjct: 274 WVRIDPFTTRVTGPDTQTCGINC* 345
Score = 127 bits (271), Expect = 2e-028
Identities = 54/83 (65%), Positives = 64/83 (77%)
Frame = +2 / -3
Query: 242 QLMPHCLTSGPLVLTMKGSILTQSREKMEASSTDQMTTMVGVRFWRPMSPLRNG*RWTMT 421
QLMPH SGP+ + GS+ T S+EK++A+ Q TTMVGVRF RPM PLRNG + T+T
Sbjct: 341 QLMPHV*VSGPVTRVVNGSMRTHSKEKIDANRIAQTTTMVGVRFCRPMRPLRNGYKCTIT 162
Query: 422 QKAKKSLPKSGPHDWYPLLMASE 490
QKAKKSLPKSGPHDW PLL+A E
Sbjct: 161 QKAKKSLPKSGPHDW*PLLIA*E 93
>gb|CF071834.1|CF071834 FE1_19_D03.b1_A002 Iron-deficient seedlings Sorghum bicolor cDNA
clone FE1_19_D03_A002 3', mRNA sequence
Length = 615
Score = 186 bits (400), Expect = 3e-046
Identities = 72/84 (85%), Positives = 77/84 (91%)
Frame = -2 / +1
Query: 489 SDAINNGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVIWSVLLASIFSLL 310
S AIN+GYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVV+W++LLASIFSLL
Sbjct: 121 SYAINSGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVVWAILLASIFSLL 300
Query: 309 WVRIDPFIVRTKGPDVRQCGINC* 238
WVRIDPF R GPD + CGINC*
Sbjct: 301 WVRIDPFTTRVTGPDTQTCGINC* 372
Score = 127 bits (271), Expect = 2e-028
Identities = 54/83 (65%), Positives = 64/83 (77%)
Frame = +2 / -2
Query: 242 QLMPHCLTSGPLVLTMKGSILTQSREKMEASSTDQMTTMVGVRFWRPMSPLRNG*RWTMT 421
QLMPH SGP+ + GS+ T S+EK++A+ Q TTMVGVRF RPM PLRNG + T+T
Sbjct: 368 QLMPHV*VSGPVTRVVNGSMRTHSKEKIDANRIAQTTTMVGVRFCRPMRPLRNGYKCTIT 189
Query: 422 QKAKKSLPKSGPHDWYPLLMASE 490
QKAKKSLPKSGPHDW PLL+A E
Sbjct: 188 QKAKKSLPKSGPHDW*PLLIA*E 120
>gb|CF771740.1|CF771740 DSBF1_23_E06.g1_A010 Drought-stressed before flowering Sorghum
bicolor cDNA clone DSBF1_23_E06_A010 3', mRNA sequence
Length = 633
Score = 186 bits (400), Expect = 3e-046
Identities = 72/84 (85%), Positives = 77/84 (91%)
Frame = -2 / +3
Query: 489 SDAINNGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVIWSVLLASIFSLL 310
S AIN+GYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVV+W++LLASIFSLL
Sbjct: 111 SYAINSGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVVWAILLASIFSLL 290
Query: 309 WVRIDPFIVRTKGPDVRQCGINC* 238
WVRIDPF R GPD + CGINC*
Sbjct: 291 WVRIDPFTTRVTGPDTQTCGINC* 362
Score = 127 bits (271), Expect = 2e-028
Identities = 54/83 (65%), Positives = 64/83 (77%)
Frame = +2 / -3
Query: 242 QLMPHCLTSGPLVLTMKGSILTQSREKMEASSTDQMTTMVGVRFWRPMSPLRNG*RWTMT 421
QLMPH SGP+ + GS+ T S+EK++A+ Q TTMVGVRF RPM PLRNG + T+T
Sbjct: 358 QLMPHV*VSGPVTRVVNGSMRTHSKEKIDANRIAQTTTMVGVRFCRPMRPLRNGYKCTIT 179
Query: 422 QKAKKSLPKSGPHDWYPLLMASE 490
QKAKKSLPKSGPHDW PLL+A E
Sbjct: 178 QKAKKSLPKSGPHDW*PLLIA*E 110
>gb|CN127278.1|CN127278 RHOH1_22_C03.b1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_22_C03_A002 3', mRNA sequence
Length = 857
Score = 186 bits (400), Expect = 3e-046
Identities = 72/84 (85%), Positives = 77/84 (91%)
Frame = -2 / +3
Query: 489 SDAINNGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVIWSVLLASIFSLL 310
S AIN+GYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVV+W++LLASIFSLL
Sbjct: 270 SYAINSGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVVWAILLASIFSLL 449
Query: 309 WVRIDPFIVRTKGPDVRQCGINC* 238
WVRIDPF R GPD + CGINC*
Sbjct: 450 WVRIDPFTTRVTGPDTQTCGINC* 521
Score = 127 bits (271), Expect = 2e-028
Identities = 54/83 (65%), Positives = 64/83 (77%)
Frame = +2 / -2
Query: 242 QLMPHCLTSGPLVLTMKGSILTQSREKMEASSTDQMTTMVGVRFWRPMSPLRNG*RWTMT 421
QLMPH SGP+ + GS+ T S+EK++A+ Q TTMVGVRF RPM PLRNG + T+T
Sbjct: 517 QLMPHV*VSGPVTRVVNGSMRTHSKEKIDANRIAQTTTMVGVRFCRPMRPLRNGYKCTIT 338
Query: 422 QKAKKSLPKSGPHDWYPLLMASE 490
QKAKKSLPKSGPHDW PLL+A E
Sbjct: 337 QKAKKSLPKSGPHDW*PLLIA*E 269
>gb|CN128754.1|CN128754 RHOH1_31_H09.b1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_31_H09_A002 3', mRNA sequence
Length = 705
Score = 186 bits (400), Expect = 3e-046
Identities = 72/84 (85%), Positives = 77/84 (91%)
Frame = -2 / +1
Query: 489 SDAINNGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVIWSVLLASIFSLL 310
S AIN+GYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVV+W++LLASIFSLL
Sbjct: 193 SYAINSGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVVWAILLASIFSLL 372
Query: 309 WVRIDPFIVRTKGPDVRQCGINC* 238
WVRIDPF R GPD + CGINC*
Sbjct: 373 WVRIDPFTTRVTGPDTQTCGINC* 444
Score = 127 bits (271), Expect = 2e-028
Identities = 54/83 (65%), Positives = 64/83 (77%)
Frame = +2 / -2
Query: 242 QLMPHCLTSGPLVLTMKGSILTQSREKMEASSTDQMTTMVGVRFWRPMSPLRNG*RWTMT 421
QLMPH SGP+ + GS+ T S+EK++A+ Q TTMVGVRF RPM PLRNG + T+T
Sbjct: 440 QLMPHV*VSGPVTRVVNGSMRTHSKEKIDANRIAQTTTMVGVRFCRPMRPLRNGYKCTIT 261
Query: 422 QKAKKSLPKSGPHDWYPLLMASE 490
QKAKKSLPKSGPHDW PLL+A E
Sbjct: 260 QKAKKSLPKSGPHDW*PLLIA*E 192
>gb|CN128917.1|CN128917 RHOH1_32_H10.b1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_32_H10_A002 3', mRNA sequence
Length = 785
Score = 186 bits (400), Expect = 3e-046
Identities = 72/84 (85%), Positives = 77/84 (91%)
Frame = -2 / +2
Query: 489 SDAINNGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVIWSVLLASIFSLL 310
S AIN+GYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVV+W++LLASIFSLL
Sbjct: 266 SYAINSGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVVWAILLASIFSLL 445
Query: 309 WVRIDPFIVRTKGPDVRQCGINC* 238
WVRIDPF R GPD + CGINC*
Sbjct: 446 WVRIDPFTTRVTGPDTQTCGINC* 517
Score = 127 bits (271), Expect = 2e-028
Identities = 54/83 (65%), Positives = 64/83 (77%)
Frame = +2 / -3
Query: 242 QLMPHCLTSGPLVLTMKGSILTQSREKMEASSTDQMTTMVGVRFWRPMSPLRNG*RWTMT 421
QLMPH SGP+ + GS+ T S+EK++A+ Q TTMVGVRF RPM PLRNG + T+T
Sbjct: 513 QLMPHV*VSGPVTRVVNGSMRTHSKEKIDANRIAQTTTMVGVRFCRPMRPLRNGYKCTIT 334
Query: 422 QKAKKSLPKSGPHDWYPLLMASE 490
QKAKKSLPKSGPHDW PLL+A E
Sbjct: 333 QKAKKSLPKSGPHDW*PLLIA*E 265
>gb|CD219969.1|CD219969 CCC1_60_F06.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_60_F06_A007 3', mRNA sequence
Length = 579
Score = 183 bits (395), Expect = 1e-045
Identities = 71/84 (84%), Positives = 76/84 (90%)
Frame = -2 / +2
Query: 489 SDAINNGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVIWSVLLASIFSLL 310
S AIN+GYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVV+W++L ASIFSLL
Sbjct: 56 SYAINSGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVVWAILXASIFSLL 235
Query: 309 WVRIDPFIVRTKGPDVRQCGINC* 238
WVRIDPF R GPD + CGINC*
Sbjct: 236 WVRIDPFTTRVTGPDTQTCGINC* 307
Score = 126 bits (270), Expect = 2e-028
Identities = 54/83 (65%), Positives = 63/83 (75%)
Frame = +2 / -1
Query: 242 QLMPHCLTSGPLVLTMKGSILTQSREKMEASSTDQMTTMVGVRFWRPMSPLRNG*RWTMT 421
QLMPH SGP+ + GS+ T S+EK++A Q TTMVGVRF RPM PLRNG + T+T
Sbjct: 303 QLMPHV*VSGPVTRVVNGSMRTHSKEKIDAXRIAQTTTMVGVRFCRPMRPLRNGYKCTIT 124
Query: 422 QKAKKSLPKSGPHDWYPLLMASE 490
QKAKKSLPKSGPHDW PLL+A E
Sbjct: 123 QKAKKSLPKSGPHDW*PLLIA*E 55
>gb|CF072959.1|CF072959 FE1_27_D01.b1_A002 Iron-deficient seedlings Sorghum bicolor cDNA
clone FE1_27_D01_A002 3', mRNA sequence
Length = 574
Score = 183 bits (394), Expect = 2e-045
Identities = 72/96 (75%), Positives = 81/96 (84%)
Frame = -2 / +2
Query: 489 SDAINNGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVIWSVLLASIFSLL 310
SDA+NNGY SWGPLFGKLFF+FWVIVHLYPFLK LMGRQNRTPTIVV+WS+LLASIFSL+
Sbjct: 113 SDAVNNGYGSWGPLFGKLFFSFWVIVHLYPFLKALMGRQNRTPTIVVLWSILLASIFSLV 292
Query: 309 WVRIDPFIVRTKGPDVRQCGINC*AAYHGSKKF*SL 202
WVRIDPFI + KGP ++ CG+ C* Y S SL
Sbjct: 293 WVRIDPFIPKAKGPILKPCGVEC*YEYDRSASSPSL 400
Score = 131 bits (281), Expect = 7e-030
Identities = 58/84 (69%), Positives = 61/84 (72%)
Frame = +2 / -2
Query: 239 QQLMPHCLTSGPLVLTMKGSILTQSREKMEASSTDQMTTMVGVRFWRPMSPLRNG*RWTM 418
Q PH L GPL MKGSILTQ+ EKMEA DQ TTMVGVRF P+ LRNG RWTM
Sbjct: 363 QHSTPHGLRMGPLAFGMKGSILTQTSEKMEARRMDQSTTMVGVRFCLPIRALRNGYRWTM 184
Query: 419 TQKAKKSLPKSGPHDWYPLLMASE 490
TQK KKSLP SGPH+ YPLL ASE
Sbjct: 183 TQKEKKSLPNSGPHEPYPLLTASE 112
>gb|CN134554.1|CN134554 OX1_27_C06.b1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_27_C06_A002 3', mRNA sequence
Length = 677
Score = 181 bits (390), Expect = 6e-045
Identities = 65/83 (78%), Positives = 79/83 (95%)
Frame = -2 / +3
Query: 489 SDAINNGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVIWSVLLASIFSLL 310
S+AINNGY+SWGPLFGKLFFAFWVI+HLYPFLKGL+GRQNRTPTIV++WS+LLASIFSLL
Sbjct: 12 SNAINNGYESWGPLFGKLFFAFWVIIHLYPFLKGLVGRQNRTPTIVIVWSILLASIFSLL 191
Query: 309 WVRIDPFIVRTKGPDVRQCGINC 241
WVRIDPF+ ++ GP + +CG++C
Sbjct: 192 WVRIDPFLAKSDGPFLEECGLDC 260
Score = 116 bits (247), Expect = 3e-025
Identities = 50/83 (60%), Positives = 55/83 (66%)
Frame = +2 / -2
Query: 242 QLMPHCLTSGPLVLTMKGSILTQSREKMEASSTDQMTTMVGVRFWRPMSPLRNG*RWTMT 421
Q PH GP +L GS+ T EKMEAS DQ T+VGVRF RP PLRNG RW +T
Sbjct: 259 QSRPHSSRKGPSLLARNGSMRTHRSEKMEASRMDQTITIVGVRFCRPTRPLRNGYRWMIT 80
Query: 422 QKAKKSLPKSGPHDWYPLLMASE 490
Q AKKS PK GPHD YPLL+A E
Sbjct: 79 QNAKKSFPKRGPHDSYPLLIAFE 11
>gb|BG101839.1|BG101839 RHIZ2_23_A10.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 647
Score = 181 bits (389), Expect = 9e-045
Identities = 65/83 (78%), Positives = 79/83 (95%)
Frame = -2 / +1
Query: 489 SDAINNGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVIWSVLLASIFSLL 310
S+AINNGY+SWGPLFGKLFFAFWVI+HLYPFLKGL+GRQNRTPTIV++WS+LLASIFSLL
Sbjct: 298 SNAINNGYESWGPLFGKLFFAFWVIIHLYPFLKGLVGRQNRTPTIVIVWSILLASIFSLL 477
Query: 309 WVRIDPFIVRTKGPDVRQCGINC 241
WVRIDPF+ ++ GP + +CG++C
Sbjct: 478 WVRIDPFLAKSDGPLLEECGLDC 546
Score = 115 bits (246), Expect = 5e-025
Identities = 50/83 (60%), Positives = 55/83 (66%)
Frame = +2 / -1
Query: 242 QLMPHCLTSGPLVLTMKGSILTQSREKMEASSTDQMTTMVGVRFWRPMSPLRNG*RWTMT 421
Q PH GP +L GS+ T EKMEAS DQ T+VGVRF RP PLRNG RW +T
Sbjct: 545 QSRPHSSRRGPSLLARNGSMRTHRSEKMEASRMDQTITIVGVRFCRPTRPLRNGYRWMIT 366
Query: 422 QKAKKSLPKSGPHDWYPLLMASE 490
Q AKKS PK GPHD YPLL+A E
Sbjct: 365 QNAKKSFPKRGPHDSYPLLIAFE 297
>gb|BF480979.1|BF480979 FM1_15_G12.g1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 721
Score = 180 bits (388), Expect = 1e-044
Identities = 66/83 (79%), Positives = 78/83 (93%)
Frame = -2 / +3
Query: 489 SDAINNGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVIWSVLLASIFSLL 310
S+AINNGY+SWGPLFGKLFFAFWVIVHLYPFLKGL+GRQNRTPTIV++WS+LLASIFSLL
Sbjct: 342 SNAINNGYESWGPLFGKLFFAFWVIVHLYPFLKGLVGRQNRTPTIVIVWSILLASIFSLL 521
Query: 309 WVRIDPFIVRTKGPDVRQCGINC 241
WVRIDPF+ + GP + +CG++C
Sbjct: 522 WVRIDPFLAKDDGPLLEECGLDC 590
Score = 113 bits (242), Expect = 2e-024
Identities = 50/83 (60%), Positives = 54/83 (65%)
Frame = +2 / -1
Query: 242 QLMPHCLTSGPLVLTMKGSILTQSREKMEASSTDQMTTMVGVRFWRPMSPLRNG*RWTMT 421
Q PH GP KGSI TQS EK+EA DQ T+VGV F P PLRNG*RWT+T
Sbjct: 589 QSKPHSSNRGPSSFARKGSIRTQSSEKIEAKRMDQTMTIVGVLFCLPTRPLRNG*RWTIT 410
Query: 422 QKAKKSLPKSGPHDWYPLLMASE 490
Q AKKS P GPHD YPLL+A E
Sbjct: 409 QNAKKSFPNRGPHDSYPLLIALE 341
>gb|BF481250.1|BF481250 FM1_17_E01.b1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 412
Score = 180 bits (388), Expect = 1e-044
Identities = 66/83 (79%), Positives = 78/83 (93%)
Frame = -2 / +1
Query: 489 SDAINNGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVIWSVLLASIFSLL 310
S+AINNGY+SWGPLFGKLFFAFWVIVHLYPFLKGL+GRQNRTPTIV++WS+LLASIFSLL
Sbjct: 139 SNAINNGYESWGPLFGKLFFAFWVIVHLYPFLKGLVGRQNRTPTIVIVWSILLASIFSLL 318
Query: 309 WVRIDPFIVRTKGPDVRQCGINC 241
WVRIDPF+ + GP + +CG++C
Sbjct: 319 WVRIDPFLAKDDGPLLEECGLDC 387
Score = 113 bits (242), Expect = 2e-024
Identities = 50/83 (60%), Positives = 54/83 (65%)
Frame = +2 / -3
Query: 242 QLMPHCLTSGPLVLTMKGSILTQSREKMEASSTDQMTTMVGVRFWRPMSPLRNG*RWTMT 421
Q PH GP KGSI TQS EK+EA DQ T+VGV F P PLRNG*RWT+T
Sbjct: 386 QSKPHSSNRGPSSFARKGSIRTQSSEKIEAKRMDQTMTIVGVLFCLPTRPLRNG*RWTIT 207
Query: 422 QKAKKSLPKSGPHDWYPLLMASE 490
Q AKKS P GPHD YPLL+A E
Sbjct: 206 QNAKKSFPNRGPHDSYPLLIALE 138
>gb|BG933529.1|BG933529 WS1_4_E04.b1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA, mRNA
sequence
Length = 466
Score = 180 bits (388), Expect = 1e-044
Identities = 66/83 (79%), Positives = 78/83 (93%)
Frame = -2 / +2
Query: 489 SDAINNGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVIWSVLLASIFSLL 310
S+AINNGY+SWGPLFGKLFFAFWVIVHLYPFLKGL+GRQNRTPTIV++WS+LLASIFSLL
Sbjct: 41 SNAINNGYESWGPLFGKLFFAFWVIVHLYPFLKGLVGRQNRTPTIVIVWSILLASIFSLL 220
Query: 309 WVRIDPFIVRTKGPDVRQCGINC 241
WVRIDPF+ + GP + +CG++C
Sbjct: 221 WVRIDPFLAKDDGPLLEECGLDC 289
Score = 110 bits (235), Expect = 1e-023
Identities = 49/83 (59%), Positives = 53/83 (63%)
Frame = +2 / -2
Query: 242 QLMPHCLTSGPLVLTMKGSILTQSREKMEASSTDQMTTMVGVRFWRPMSPLRNG*RWTMT 421
Q PH SGP KGSI TQ EK+EAS D T+VGV F P PLR G RWT+T
Sbjct: 288 QSKPHSSRSGPSSFARKGSIRTQRSEKIEASRMDHTMTIVGVLFCLPTKPLRKGYRWTIT 109
Query: 422 QKAKKSLPKSGPHDWYPLLMASE 490
Q AKKS PK GPHD YPLL+A E
Sbjct: 108 QNAKKSFPKRGPHDSYPLLIALE 40
>gb|BI140990.1|BI140990 IP1_41_G10.b1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 513
Score = 180 bits (388), Expect = 1e-044
Identities = 66/83 (79%), Positives = 78/83 (93%)
Frame = -2 / +1
Query: 489 SDAINNGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVIWSVLLASIFSLL 310
S+AINNGY+SWGPLFGKLFFAFWVIVHLYPFLKGL+GRQNRTPTIV++WS+LLASIFSLL
Sbjct: 127 SNAINNGYESWGPLFGKLFFAFWVIVHLYPFLKGLVGRQNRTPTIVIVWSILLASIFSLL 306
Query: 309 WVRIDPFIVRTKGPDVRQCGINC 241
WVRIDPF+ + GP + +CG++C
Sbjct: 307 WVRIDPFLAKDDGPLLEECGLDC 375
Score = 113 bits (242), Expect = 2e-024
Identities = 50/83 (60%), Positives = 54/83 (65%)
Frame = +2 / -2
Query: 242 QLMPHCLTSGPLVLTMKGSILTQSREKMEASSTDQMTTMVGVRFWRPMSPLRNG*RWTMT 421
Q PH GP KGSI TQS EK+EA DQ T+VGV F P PLRNG*RWT+T
Sbjct: 374 QSKPHSSNRGPSSFARKGSIRTQSSEKIEAKRMDQTMTIVGVLFCLPTRPLRNG*RWTIT 195
Query: 422 QKAKKSLPKSGPHDWYPLLMASE 490
Q AKKS P GPHD YPLL+A E
Sbjct: 194 QNAKKSFPNRGPHDSYPLLIALE 126
>gb|CW148395.1|CW148395 104_547_11141932_148_35011_016 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11141932, DNA
sequence
Length = 621
Score = 179 bits (385), Expect = 3e-044
Identities = 69/84 (82%), Positives = 75/84 (89%)
Frame = -2 / -3
Query: 489 SDAINNGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVIWSVLLASIFSLL 310
S AIN+GYQSWGPLFGKLFFAFWVIVHLYPFLKGLMG+QNRTPTIV++W+ LLASIFSLL
Sbjct: 283 SYAINSGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGKQNRTPTIVLVWATLLASIFSLL 104
Query: 309 WVRIDPFIVRTKGPDVRQCGINC* 238
WVRIDPF R GP + CGINC*
Sbjct: 103 WVRIDPFTTRVTGPPIGNCGINC* 32
Score = 109 bits (233), Expect = 3e-023
Identities = 47/83 (56%), Positives = 54/83 (65%)
Frame = +2 / +3
Query: 242 QLMPHCLTSGPLVLTMKGSILTQSREKMEASSTDQMTTMVGVRFWRPMSPLRNG*RWTMT 421
QLMP GP+ + GSI T SRE ++A TMVGVRF PM PLR G +WT+T
Sbjct: 36 QLMPQLPIGGPVTRVVNGSIRTHSRENIDARRVAHTRTMVGVRFCFPMRPLRKGYKWTIT 215
Query: 422 QKAKKSLPKSGPHDWYPLLMASE 490
Q AKKS PK GPHDW PLL+A E
Sbjct: 216 QNAKKSFPKRGPHDW*PLLIA*E 284
>gb|AW286294.1|AW286294 LG1_330_A01.g1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 538
Score = 179 bits (385), Expect = 3e-044
Identities = 69/84 (82%), Positives = 75/84 (89%)
Frame = -2 / +1
Query: 489 SDAINNGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVIWSVLLASIFSLL 310
S AIN+GYQSWGPLFGKLFFAFWVIVHLYPFLKGLMG+QNRTPTIV++W+ LLASIFSLL
Sbjct: 109 SYAINSGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGKQNRTPTIVLVWATLLASIFSLL 288
Query: 309 WVRIDPFIVRTKGPDVRQCGINC* 238
WVRIDPF R GP + CGINC*
Sbjct: 289 WVRIDPFTTRVTGPPIGNCGINC* 360
Score = 109 bits (233), Expect = 3e-023
Identities = 47/83 (56%), Positives = 54/83 (65%)
Frame = +2 / -3
Query: 242 QLMPHCLTSGPLVLTMKGSILTQSREKMEASSTDQMTTMVGVRFWRPMSPLRNG*RWTMT 421
QLMP GP+ + GSI T SRE ++A TMVGVRF PM PLR G +WT+T
Sbjct: 356 QLMPQLPIGGPVTRVVNGSIRTHSRENIDARRVAHTRTMVGVRFCFPMRPLRKGYKWTIT 177
Query: 422 QKAKKSLPKSGPHDWYPLLMASE 490
Q AKKS PK GPHDW PLL+A E
Sbjct: 176 QNAKKSFPKRGPHDW*PLLIA*E 108
>gb|CD423905.1|CD423905 SA1_2_G12.b1_A002 Salicylic acid-treated seedlings Sorghum bicolor
cDNA clone SA1_2_G12_A002 3', mRNA sequence
Length = 743
Score = 179 bits (385), Expect = 3e-044
Identities = 69/84 (82%), Positives = 75/84 (89%)
Frame = -2 / +3
Query: 489 SDAINNGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVIWSVLLASIFSLL 310
S AIN+GYQSWGPLFGKLFFAFWVIVHLYPFLKGLMG+QNRTPTIV++W+ LLASIFSLL
Sbjct: 315 SYAINSGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGKQNRTPTIVLVWATLLASIFSLL 494
Query: 309 WVRIDPFIVRTKGPDVRQCGINC* 238
WVRIDPF R GP + CGINC*
Sbjct: 495 WVRIDPFTTRVTGPPIGNCGINC* 566
Score = 109 bits (233), Expect = 3e-023
Identities = 47/83 (56%), Positives = 54/83 (65%)
Frame = +2 / -2
Query: 242 QLMPHCLTSGPLVLTMKGSILTQSREKMEASSTDQMTTMVGVRFWRPMSPLRNG*RWTMT 421
QLMP GP+ + GSI T SRE ++A TMVGVRF PM PLR G +WT+T
Sbjct: 562 QLMPQLPIGGPVTRVVNGSIRTHSRENIDARRVAHTRTMVGVRFCFPMRPLRKGYKWTIT 383
Query: 422 QKAKKSLPKSGPHDWYPLLMASE 490
Q AKKS PK GPHDW PLL+A E
Sbjct: 382 QNAKKSFPKRGPHDW*PLLIA*E 314
>gb|CF757235.1|CF757235 DSAF1_15_D07.g1_A011 Drought-stressed after flowering Sorghum
bicolor cDNA clone DSAF1_15_D07_A011 3', mRNA sequence
Length = 393
Score = 179 bits (385), Expect = 3e-044
Identities = 66/83 (79%), Positives = 78/83 (93%)
Frame = -2 / +3
Query: 489 SDAINNGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVIWSVLLASIFSLL 310
S+AINNGY+SWGPLFGKLFFAFWVIVHLYPFLKGL+GRQNRTPTIV++WS+LLASIFSLL
Sbjct: 3 SNAINNGYESWGPLFGKLFFAFWVIVHLYPFLKGLVGRQNRTPTIVIVWSILLASIFSLL 182
Query: 309 WVRIDPFIVRTKGPDVRQCGINC 241
WVRIDPF+ + GP + +CG++C
Sbjct: 183 WVRIDPFLGKDDGPLLEECGLDC 251
Score = 113 bits (242), Expect = 2e-024
Identities = 50/83 (60%), Positives = 54/83 (65%)
Frame = +2 / -3
Query: 242 QLMPHCLTSGPLVLTMKGSILTQSREKMEASSTDQMTTMVGVRFWRPMSPLRNG*RWTMT 421
Q PH GP KGSI TQS EK+EA DQ T+VGV F P PLRNG*RWT+T
Sbjct: 250 QSKPHSSNRGPSSFPRKGSIRTQSSEKIEAKRMDQTMTIVGVLFCLPTKPLRNG*RWTIT 71
Query: 422 QKAKKSLPKSGPHDWYPLLMASE 490
Q AKKS P GPHD YPLL+A E
Sbjct: 70 QNAKKSFPNRGPHDSYPLLIALE 2
>gb|CD211868.1|CD211868 HS1_67_A05.b1_A012 Heat-shocked seedlings Sorghum bicolor cDNA
clone HS1_67_A05_A012 3', mRNA sequence
Length = 539
Score = 178 bits (383), Expect = 6e-044
Identities = 69/84 (82%), Positives = 74/84 (88%)
Frame = -2 / +1
Query: 489 SDAINNGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVIWSVLLASIFSLL 310
S AIN+GYQSWGPLFGKLFFAFWVIVHLYPFLKGLMG+QNRTPTIV +W+ LLASIFSLL
Sbjct: 109 SYAINSGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGKQNRTPTIVFVWATLLASIFSLL 288
Query: 309 WVRIDPFIVRTKGPDVRQCGINC* 238
WVRIDPF R GP + CGINC*
Sbjct: 289 WVRIDPFTTRVTGPPIGNCGINC* 360
Score = 109 bits (233), Expect = 3e-023
Identities = 47/83 (56%), Positives = 54/83 (65%)
Frame = +2 / -1
Query: 242 QLMPHCLTSGPLVLTMKGSILTQSREKMEASSTDQMTTMVGVRFWRPMSPLRNG*RWTMT 421
QLMP GP+ + GSI T SRE ++A TMVGVRF PM PLR G +WT+T
Sbjct: 356 QLMPQLPIGGPVTRVVNGSIRTHSRENIDARRVAHTKTMVGVRFCFPMRPLRKGYKWTIT 177
Query: 422 QKAKKSLPKSGPHDWYPLLMASE 490
Q AKKS PK GPHDW PLL+A E
Sbjct: 176 QNAKKSFPKRGPHDW*PLLIA*E 108
>gb|CX608205.1|CX608205 ANR1_37_F12.b1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_37_F12_A002 3', mRNA sequence
Length = 528
Score = 177 bits (382), Expect = 8e-044
Identities = 70/96 (72%), Positives = 79/96 (82%)
Frame = -2 / +1
Query: 489 SDAINNGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVIWSVLLASIFSLL 310
SDA+NNGY SWGPLFGKLFF+FWVIVHLYPFLK LMGRQ RTP IVV+WS+LLASIFSL+
Sbjct: 43 SDAVNNGYGSWGPLFGKLFFSFWVIVHLYPFLKALMGRQTRTPPIVVLWSILLASIFSLV 222
Query: 309 WVRIDPFIVRTKGPDVRQCGINC*AAYHGSKKF*SL 202
WVRIDPFI + KGP ++ CG+ C* Y S SL
Sbjct: 223 WVRIDPFIPKAKGPILKPCGVEC*YEYDRSASSPSL 330
Score = 125 bits (267), Expect = 6e-028
Identities = 56/84 (66%), Positives = 59/84 (70%)
Frame = +2 / -2
Query: 239 QQLMPHCLTSGPLVLTMKGSILTQSREKMEASSTDQMTTMVGVRFWRPMSPLRNG*RWTM 418
Q PH L GPL MKGSILTQ+ EKMEA DQ TTM GVR P+ LRNG RWTM
Sbjct: 293 QHSTPHGLRMGPLAFGMKGSILTQTSEKMEARRMDQSTTMGGVRVCLPIRALRNGYRWTM 114
Query: 419 TQKAKKSLPKSGPHDWYPLLMASE 490
TQK KKSLP SGPH+ YPLL ASE
Sbjct: 113 TQKEKKSLPNSGPHEPYPLLTASE 42
>gb|CF072057.1|CF072057 FE1_20_C10.b1_A002 Iron-deficient seedlings Sorghum bicolor cDNA
clone FE1_20_C10_A002 3', mRNA sequence
Length = 666
Score = 177 bits (380), Expect = 1e-043
Identities = 68/84 (80%), Positives = 74/84 (88%)
Frame = -2 / +1
Query: 489 SDAINNGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVIWSVLLASIFSLL 310
S AIN+GYQSWGPLFGKLFFAFWV VHLYPFLKGLMG+QNRTPTIV++W+ LLASIFSLL
Sbjct: 241 SYAINSGYQSWGPLFGKLFFAFWVTVHLYPFLKGLMGKQNRTPTIVLVWATLLASIFSLL 420
Query: 309 WVRIDPFIVRTKGPDVRQCGINC* 238
WVRIDPF R GP + CGINC*
Sbjct: 421 WVRIDPFTTRVTGPPIGNCGINC* 492
Score = 109 bits (233), Expect = 3e-023
Identities = 47/83 (56%), Positives = 54/83 (65%)
Frame = +2 / -2
Query: 242 QLMPHCLTSGPLVLTMKGSILTQSREKMEASSTDQMTTMVGVRFWRPMSPLRNG*RWTMT 421
QLMP GP+ + GSI T SRE ++A TMVGVRF PM PLR G +WT+T
Sbjct: 488 QLMPQLPIGGPVTRVVNGSIRTHSRENIDARRVAHTRTMVGVRFCFPMRPLRKGYKWTVT 309
Query: 422 QKAKKSLPKSGPHDWYPLLMASE 490
Q AKKS PK GPHDW PLL+A E
Sbjct: 308 QNAKKSFPKRGPHDW*PLLIA*E 240
>gb|BE598541.1|BE598541 PI1_83_C07.g1_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 400
Score = 167 bits (359), Expect = 1e-040
Identities = 64/79 (81%), Positives = 70/79 (88%)
Frame = -2 / +3
Query: 489 SDAINNGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVIWSVLLASIFSLL 310
S AIN+GYQSWGPLFGKLFFAFWVIVHLYPFLKGLMG+QNRTPTIV++W+ LLASIFSLL
Sbjct: 159 SYAINSGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGKQNRTPTIVLVWATLLASIFSLL 338
Query: 309 WVRIDPFIVRTKGPDVRQC 253
WVRIDPF R GP + C
Sbjct: 339 WVRIDPFTTRVTGPPIGNC 395
Score = 102 bits (217), Expect = 5e-021
Identities = 43/74 (58%), Positives = 50/74 (67%)
Frame = +2 / -1
Query: 269 GPLVLTMKGSILTQSREKMEASSTDQMTTMVGVRFWRPMSPLRNG*RWTMTQKAKKSLPK 448
GP+ + GSI T SRE ++A TMVGVRF PM PLR G +WT+TQ AKKS PK
Sbjct: 379 GPVTRVVNGSIRTHSRENIDARRVAHTRTMVGVRFCFPMRPLRKGYKWTITQNAKKSFPK 200
Query: 449 SGPHDWYPLLMASE 490
GPHDW PLL+A E
Sbjct: 199 RGPHDW*PLLIA*E 158
>gb|CW413531.1|CW413531 fsbb001f112l18f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f112l18, DNA
sequence
Length = 427
Score = 166 bits (356), Expect = 3e-040
Identities = 66/66 (100%), Positives = 66/66 (100%)
Frame = -2 / +3
Query: 489 SDAINNGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVIWSVLLASIFSLL 310
SDAINNGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVIWSVLLASIFSLL
Sbjct: 228 SDAINNGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVIWSVLLASIFSLL 407
Query: 309 WVRIDP 292
WVRIDP
Sbjct: 408 WVRIDP 425
Score = 159 bits (341), Expect = 4e-038
Identities = 65/67 (97%), Positives = 65/67 (97%)
Frame = +2 / -1
Query: 290 KGSILTQSREKMEASSTDQMTTMVGVRFWRPMSPLRNG*RWTMTQKAKKSLPKSGPHDWY 469
KGSILTQSREKMEASSTDQMTTMVGV FWRPMSPLRNG*RWTMTQ AKKSLPKSGPHDWY
Sbjct: 427 KGSILTQSREKMEASSTDQMTTMVGVLFWRPMSPLRNG*RWTMTQNAKKSLPKSGPHDWY 248
Query: 470 PLLMASE 490
PLLMASE
Sbjct: 247 PLLMASE 227
>gb|BG948058.1|BG948058 IP1_8_G12.b1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 597
Score = 160 bits (345), Expect = 1e-038
Identities = 61/67 (91%), Positives = 66/67 (98%)
Frame = -2 / +2
Query: 489 SDAINNGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVIWSVLLASIFSLL 310
SDA+NNGY SWGPLFGKLFF+FWVIVHLYPFLKGLMGRQNRTPTIVV+WS+LLASIFSL+
Sbjct: 395 SDAVNNGYGSWGPLFGKLFFSFWVIVHLYPFLKGLMGRQNRTPTIVVLWSILLASIFSLV 574
Query: 309 WVRIDPF 289
WVRIDPF
Sbjct: 575 WVRIDPF 595
Score = 121 bits (258), Expect = 1e-026
Identities = 52/68 (76%), Positives = 55/68 (80%)
Frame = +2 / -1
Query: 287 MKGSILTQSREKMEASSTDQMTTMVGVRFWRPMSPLRNG*RWTMTQKAKKSLPKSGPHDW 466
MKGSILTQ+ EKMEA DQ TTMVGVRF P+ PLRNG RWTMTQK KKSLP SGPH+
Sbjct: 597 MKGSILTQTSEKMEARRMDQSTTMVGVRFCLPIRPLRNGYRWTMTQKEKKSLPNSGPHEP 418
Query: 467 YPLLMASE 490
YPLL ASE
Sbjct: 417 YPLLTASE 394
>gb|BF317903.1|BF317903 OV1_9_B10.b1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA sequence
Length = 511
Score = 156 bits (336), Expect(2) = 1e-037
Identities = 60/72 (83%), Positives = 68/72 (94%)
Frame = -2 / +3
Query: 489 SDAINNGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVIWSVLLASIFSLL 310
S AIN+GYQSWGPLFGKLFF+ WVI+HLYPFLKGLMGRQNRTPTIV++WS+LLASIFSLL
Sbjct: 195 SYAINSGYQSWGPLFGKLFFSIWVILHLYPFLKGLMGRQNRTPTIVIVWSILLASIFSLL 374
Query: 309 WVRIDPFIVRTK 274
WV+IDPFI T+
Sbjct: 375 WVKIDPFISPTQ 410
Score = 21.7 bits (41), Expect(2) = 1e-037
Identities = 7/14 (50%), Positives = 10/14 (71%)
Frame = -2 / +3
Query: 276 KGPDVRQCGINC*A 235
K + QCG+NC*+
Sbjct: 411 KAAALGQCGVNC*S 452
>gb|BE918570.1|BE918570 OV1_8_E09.b1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA sequence
Length = 631
Score = 156 bits (336), Expect(2) = 1e-037
Identities = 60/72 (83%), Positives = 68/72 (94%)
Frame = -2 / +3
Query: 489 SDAINNGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVIWSVLLASIFSLL 310
S AIN+GYQSWGPLFGKLFF+ WVI+HLYPFLKGLMGRQNRTPTIV++WS+LLASIFSLL
Sbjct: 195 SYAINSGYQSWGPLFGKLFFSIWVILHLYPFLKGLMGRQNRTPTIVIVWSILLASIFSLL 374
Query: 309 WVRIDPFIVRTK 274
WV+IDPFI T+
Sbjct: 375 WVKIDPFISPTQ 410
Score = 21.7 bits (41), Expect(2) = 1e-037
Identities = 7/14 (50%), Positives = 10/14 (71%)
Frame = -2 / +3
Query: 276 KGPDVRQCGINC*A 235
K + QCG+NC*+
Sbjct: 411 KAAALGQCGVNC*S 452
>gb|CL148486.1|CL148486 104_328_10593130_148_31782_254 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10593130, DNA
sequence
Length = 638
Score = 156 bits (336), Expect(2) = 1e-037
Identities = 60/72 (83%), Positives = 68/72 (94%)
Frame = -2 / -2
Query: 489 SDAINNGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVIWSVLLASIFSLL 310
S AIN+GYQSWGPLFGKLFF+ WVI+HLYPFLKGLMGRQNRTPTIV++WS+LLASIFSLL
Sbjct: 361 SYAINSGYQSWGPLFGKLFFSIWVILHLYPFLKGLMGRQNRTPTIVIVWSILLASIFSLL 182
Query: 309 WVRIDPFIVRTK 274
WV+IDPFI T+
Sbjct: 181 WVKIDPFISPTQ 146
Score = 21.7 bits (41), Expect(2) = 1e-037
Identities = 7/14 (50%), Positives = 10/14 (71%)
Frame = -2 / -2
Query: 276 KGPDVRQCGINC*A 235
K + QCG+NC*+
Sbjct: 145 KAAALGQCGVNC*S 104
>gb|CW385345.1|CW385345 fsbb001f068m13k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f068m13, DNA
sequence
Length = 659
Score = 156 bits (336), Expect(2) = 1e-037
Identities = 60/72 (83%), Positives = 68/72 (94%)
Frame = -2 / +2
Query: 489 SDAINNGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVIWSVLLASIFSLL 310
S AIN+GYQSWGPLFGKLFF+ WVI+HLYPFLKGLMGRQNRTPTIV++WS+LLASIFSLL
Sbjct: 350 SYAINSGYQSWGPLFGKLFFSIWVILHLYPFLKGLMGRQNRTPTIVIVWSILLASIFSLL 529
Query: 309 WVRIDPFIVRTK 274
WV+IDPFI T+
Sbjct: 530 WVKIDPFISPTQ 565
Score = 21.7 bits (41), Expect(2) = 1e-037
Identities = 7/14 (50%), Positives = 10/14 (71%)
Frame = -2 / +2
Query: 276 KGPDVRQCGINC*A 235
K + QCG+NC*+
Sbjct: 566 KAAALGQCGVNC*S 607
>gb|CN129574.1|CN129574 RHOH1_36_E05.b3_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_36_E05_A002 3', mRNA sequence
Length = 768
Score = 156 bits (336), Expect(2) = 2e-037
Identities = 60/72 (83%), Positives = 68/72 (94%)
Frame = -2 / +2
Query: 489 SDAINNGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVIWSVLLASIFSLL 310
S AIN+GYQSWGPLFGKLFF+ WVI+HLYPFLKGLMGRQNRTPTIV++WS+LLASIFSLL
Sbjct: 68 SYAINSGYQSWGPLFGKLFFSIWVILHLYPFLKGLMGRQNRTPTIVIVWSILLASIFSLL 247
Query: 309 WVRIDPFIVRTK 274
WV+IDPFI T+
Sbjct: 248 WVKIDPFISPTQ 283
Score = 21.7 bits (41), Expect(2) = 2e-037
Identities = 7/14 (50%), Positives = 10/14 (71%)
Frame = -2 / +2
Query: 276 KGPDVRQCGINC*A 235
K + QCG+NC*+
Sbjct: 284 KAAALGQCGVNC*S 325
>gb|BF585666.1|BF585666 FM1_24_B07.g1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 579
Score = 156 bits (336), Expect = 2e-037
Identities = 60/72 (83%), Positives = 68/72 (94%)
Frame = -2 / +3
Query: 489 SDAINNGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVIWSVLLASIFSLL 310
S AIN+GYQSWGPLFGKLFFA WVI+HLYPFLKGLMG+QNRTPTIV++WS+LLASIFSLL
Sbjct: 18 SYAINSGYQSWGPLFGKLFFAIWVILHLYPFLKGLMGKQNRTPTIVIVWSILLASIFSLL 197
Query: 309 WVRIDPFIVRTK 274
WV+IDPFI T+
Sbjct: 198 WVKIDPFISPTQ 233
Score = 105 bits (223), Expect = 7e-022
Identities = 45/66 (68%), Positives = 47/66 (71%)
Frame = +2 / -3
Query: 287 MKGSILTQSREKMEASSTDQMTTMVGVRFWRPMSPLRNG*RWTMTQKAKKSLPKSGPHDW 466
MKGSI T S E MEA DQ TMVGVRF PM P R G*RW +TQ AK S PKSGPHDW
Sbjct: 220 MKGSIFTHSSENMEARRMDQTMTMVGVRFCFPMRPFRKG*RWRITQIAKNSFPKSGPHDW 41
Query: 467 YPLLMA 484
PLL+A
Sbjct: 40 *PLLIA 23
>gb|BG239994.1|BG239994 OV1_31_F08.g1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA
sequence
Length = 559
Score = 156 bits (336), Expect = 2e-037
Identities = 60/72 (83%), Positives = 68/72 (94%)
Frame = -2 / +2
Query: 489 SDAINNGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVIWSVLLASIFSLL 310
S AIN+GYQSWGPLFGKLFFA WVI+HLYPFLKGLMG+QNRTPTIV++WS+LLASIFSLL
Sbjct: 11 SYAINSGYQSWGPLFGKLFFAIWVILHLYPFLKGLMGKQNRTPTIVIVWSILLASIFSLL 190
Query: 309 WVRIDPFIVRTK 274
WV+IDPFI T+
Sbjct: 191 WVKIDPFISPTQ 226
Score = 105 bits (223), Expect = 7e-022
Identities = 45/66 (68%), Positives = 47/66 (71%)
Frame = +2 / -2
Query: 287 MKGSILTQSREKMEASSTDQMTTMVGVRFWRPMSPLRNG*RWTMTQKAKKSLPKSGPHDW 466
MKGSI T S E MEA DQ TMVGVRF PM P R G*RW +TQ AK S PKSGPHDW
Sbjct: 213 MKGSIFTHSSENMEARRMDQTMTMVGVRFCFPMRPFRKG*RWRITQIAKNSFPKSGPHDW 34
Query: 467 YPLLMA 484
PLL+A
Sbjct: 33 *PLLIA 16
>gb|CD227828.1|CD227828 CCC1_56_G02.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_56_G02_A007 3', mRNA sequence
Length = 652
Score = 156 bits (336), Expect = 2e-037
Identities = 60/72 (83%), Positives = 68/72 (94%)
Frame = -2 / +1
Query: 489 SDAINNGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVIWSVLLASIFSLL 310
S AIN+GYQSWGPLFGKLFFA WVI+HLYPFLKGLMG+QNRTPTIV++WS+LLASIFSLL
Sbjct: 31 SYAINSGYQSWGPLFGKLFFAIWVILHLYPFLKGLMGKQNRTPTIVIVWSILLASIFSLL 210
Query: 309 WVRIDPFIVRTK 274
WV+IDPFI T+
Sbjct: 211 WVKIDPFISPTQ 246
Score = 105 bits (223), Expect = 7e-022
Identities = 45/66 (68%), Positives = 47/66 (71%)
Frame = +2 / -3
Query: 287 MKGSILTQSREKMEASSTDQMTTMVGVRFWRPMSPLRNG*RWTMTQKAKKSLPKSGPHDW 466
MKGSI T S E MEA DQ TMVGVRF PM P R G*RW +TQ AK S PKSGPHDW
Sbjct: 233 MKGSIFTHSSENMEARRMDQTMTMVGVRFCFPMRPFRKG*RWRITQIAKNSFPKSGPHDW 54
Query: 467 YPLLMA 484
PLL+A
Sbjct: 53 *PLLIA 36
>gb|CX607839.1|CX607839 ANR1_31_C06.b1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_31_C06_A002 3', mRNA sequence
Length = 841
Score = 156 bits (336), Expect = 2e-037
Identities = 60/72 (83%), Positives = 68/72 (94%)
Frame = -2 / +1
Query: 489 SDAINNGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVIWSVLLASIFSLL 310
S AIN+GYQSWGPLFGKLFFA WVI+HLYPFLKGLMG+QNRTPTIV++WS+LLASIFSLL
Sbjct: 223 SYAINSGYQSWGPLFGKLFFAIWVILHLYPFLKGLMGKQNRTPTIVIVWSILLASIFSLL 402
Query: 309 WVRIDPFIVRTK 274
WV+IDPFI T+
Sbjct: 403 WVKIDPFISPTQ 438
Score = 105 bits (223), Expect = 7e-022
Identities = 45/66 (68%), Positives = 47/66 (71%)
Frame = +2 / -3
Query: 287 MKGSILTQSREKMEASSTDQMTTMVGVRFWRPMSPLRNG*RWTMTQKAKKSLPKSGPHDW 466
MKGSI T S E MEA DQ TMVGVRF PM P R G*RW +TQ AK S PKSGPHDW
Sbjct: 425 MKGSIFTHSSENMEARRMDQTMTMVGVRFCFPMRPFRKG*RWRITQIAKNSFPKSGPHDW 246
Query: 467 YPLLMA 484
PLL+A
Sbjct: 245 *PLLIA 228
>gb|AW282791.1|AW282791 LG1_290_D05.g1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 513
Score = 155 bits (334), Expect = 3e-037
Identities = 59/79 (74%), Positives = 70/79 (88%)
Frame = -2 / +3
Query: 489 SDAINNGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVIWSVLLASIFSLL 310
S A+N+GY+SWGPLFGK+FFA WVI+HLYPFLKGLMGRQNRTPTIVV+WSVLLAS+FSLL
Sbjct: 57 SAALNSGYESWGPLFGKVFFAMWVIMHLYPFLKGLMGRQNRTPTIVVLWSVLLASVFSLL 236
Query: 309 WVRIDPFIVRTKGPDVRQC 253
WV+IDPF+ T+ + C
Sbjct: 237 WVKIDPFVGGTETVNSNNC 293
>gb|BI074880.1|BI074880 IP1_17_A09.g1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 523
Score = 154 bits (331), Expect(2) = 5e-037
Identities = 58/69 (84%), Positives = 66/69 (95%)
Frame = -2 / +3
Query: 480 INNGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVIWSVLLASIFSLLWVR 301
IN+GYQSWGPLFGKLFF+ WVI+HLYPFLKGLMGRQNRTPTIV++WS+LLASIFSLLWV+
Sbjct: 3 INSGYQSWGPLFGKLFFSIWVILHLYPFLKGLMGRQNRTPTIVIVWSILLASIFSLLWVK 182
Query: 300 IDPFIVRTK 274
IDPFI T+
Sbjct: 183 IDPFISPTQ 209
Score = 21.7 bits (41), Expect(2) = 5e-037
Identities = 7/14 (50%), Positives = 10/14 (71%)
Frame = -2 / +3
Query: 276 KGPDVRQCGINC*A 235
K + QCG+NC*+
Sbjct: 210 KAAALGQCGVNC*S 251
>gb|BF587843.1|BF587843 FM1_33_F03.g1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 490
Score = 155 bits (332), Expect = 6e-037
Identities = 58/77 (75%), Positives = 69/77 (89%)
Frame = -2 / +3
Query: 483 AINNGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVIWSVLLASIFSLLWV 304
A+N+GY+SWGPLFGK+FFA WVI+HLYPFLKGLMGRQNRTPTIVV+WSVLLAS+FSLLWV
Sbjct: 3 ALNSGYESWGPLFGKVFFAMWVIMHLYPFLKGLMGRQNRTPTIVVLWSVLLASVFSLLWV 182
Query: 303 RIDPFIVRTKGPDVRQC 253
+IDPF+ T+ + C
Sbjct: 183 KIDPFVGGTETVNSNNC 233
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 440,235,711
Number of Sequences: 832831
Number of extensions: 5779907
Number of successful extensions: 69589
Number of sequences better than 1.0e-020: 90
length of database: 163,786,556
effective HSP length: 53
effective length of database: 119,646,513
effective search space used: 14477228073
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)