TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= QBE1h10.xg.2.1
(463 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CX607675.1|CX607675 ANR1_30_C08.b1_A002 Anaerobic roots ... 235 4e-061
gb|CX611907.1|CX611907 ANR1_27_H10.b1_A002 Anaerobic roots ... 194 6e-053
gb|CF071235.1|CF071235 FE1_16_A06.b1_A002 Iron-deficient se... 207 1e-052
gb|CX618736.1|CX618736 GABR1_41_H05.b1_A002 GA- or brassino... 206 2e-052
gb|CD222171.1|CD222171 CCC1_2_E04.b1_A007 Callus culture/ce... 203 1e-051
gb|CD228008.1|CD228008 CCC1_5_A09.b1_A007 Callus culture/ce... 203 1e-051
gb|CN135656.1|CN135656 OX1_38_E07.b1_A002 Oxidatively-stres... 125 2e-049
gb|BE595751.1|BE595751 PI1_54_D08.g1_A002 Pathogen induced ... 183 1e-045
gb|CD227690.1|CD227690 CCC1_53_F01.b1_A007 Callus culture/c... 182 2e-045
gb|CD227870.1|CD227870 CCC1_56_A03.b1_A007 Callus culture/c... 179 3e-044
gb|CW269966.1|CW269966 104_741_11402135_116_35322_090 Sorgh... 125 1e-037
gb|CF483429.1|CF483429 POL1_22_E10.b1_A002 Pollen Sorghum b... 107 4e-036
gb|CL181798.1|CL181798 104_392_10896983_148_31925_359 Sorgh... 129 7e-036
gb|CW151042.1|CW151042 104_551_11143730_148_36309_003 Sorgh... 124 3e-035
gb|CW231622.1|CW231622 104_681_11211220_148_37350_016 Sorgh... 121 9e-035
gb|CW231621.1|CW231621 104_681_11211220_116_37346_016 Sorgh... 121 9e-035
gb|BZ781398.1|BZ781398 ii28f12.g1 WGS-SbicolorF (DH5a methy... 100 1e-033
gb|CD204280.1|CD204280 HS1_7_F03.b1_A012 Heat-shocked seedl... 139 3e-032
gb|CF485997.1|CF485997 POL1_35_C03.b1_A002 Pollen Sorghum b... 107 1e-031
gb|CF482955.1|CF482955 POL1_10_G04.b1_A002 Pollen Sorghum b... 107 1e-031
gb|CD204160.1|CD204160 HS1_4_A06.b1_A012 Heat-shocked seedl... 136 2e-031
gb|CF770834.1|CF770834 DSBF1_10_C07.g1_A010 Drought-stresse... 136 2e-031
gb|CD222173.1|CD222173 CCC1_2_D02.b1_A007 Callus culture/ce... 133 2e-030
gb|CN127791.1|CN127791 RHOH1_25_C09.b1_A002 Acid- and alkal... 107 2e-029
gb|CW306883.1|CW306883 104_792_11467079_148_35713_084 Sorgh... 129 2e-029
gb|CF489729.1|CF489729 POL1_59_G05.b1_A002 Pollen Sorghum b... 107 3e-029
gb|CW394783.1|CW394783 fsbb001f082i17k0 Sorghum methylation... 89 9e-029
gb|CF483310.1|CF483310 POL1_21_H05.b1_A002 Pollen Sorghum b... 104 1e-028
gb|CW107381.1|CW107381 104_477_11096552_148_34471_022 Sorgh... 125 4e-028
gb|CW300032.1|CW300032 104_783_11463432_148_36247_092 Sorgh... 125 4e-028
gb|CW400389.1|CW400389 fsbb001f090k19k0 Sorghum methylation... 124 9e-028
gb|CF485887.1|CF485887 POL1_34_G06.b1_A002 Pollen Sorghum b... 96 2e-027
gb|CW163224.1|CW163224 104_570_11151351_148_36450_052 Sorgh... 100 3e-027
gb|CW457046.1|CW457046 fsbb001f202l01k0 Sorghum methylation... 121 6e-027
gb|CW498974.1|CW498974 fsbb001f293i01k0 Sorghum methylation... 121 6e-027
gb|BG559635.1|BG559635 RHIZ2_71_F04.g1_A003 Rhizome2 (RHIZ2... 68 2e-026
gb|CF486860.1|CF486860 POL1_40_F03.b1_A002 Pollen Sorghum b... 107 4e-024
gb|CW065110.1|CW065110 104_311_10522954_115_30121 Sorghum m... 110 2e-023
gb|CD220266.1|CD220266 CCC1_66_C08.b1_A007 Callus culture/c... 54 2e-023
gb|CX615454.1|CX615454 GABR1_20_F03.b1_A002 GA- or brassino... 54 2e-023
gb|CF482134.1|CF482134 POL1_5_C01.b1_A002 Pollen Sorghum bi... 107 3e-023
gb|CX615728.1|CX615728 GABR1_22_F10.b1_A002 GA- or brassino... 78 6e-023
gb|CD425062.1|CD425062 SA1_10_D06.b1_A002 Salicylic acid-tr... 78 6e-023
gb|CN132764.1|CN132764 OX1_8_C05.b1_A002 Oxidatively-stress... 78 6e-023
gb|CX611701.1|CX611701 ANR1_26_E07.b1_A002 Anaerobic roots ... 78 6e-023
gb|CF480470.1|CF480470 POL1_66_A09.b1_A002 Pollen Sorghum b... 107 8e-023
gb|CF480523.1|CF480523 POL1_66_G02.b1_A002 Pollen Sorghum b... 107 8e-023
gb|CF480645.1|CF480645 POL1_67_B05.b1_A002 Pollen Sorghum b... 107 8e-023
gb|CF481133.1|CF481133 POL1_70_E03.b1_A002 Pollen Sorghum b... 107 8e-023
gb|CF481471.1|CF481471 POL1_72_E04.b1_A002 Pollen Sorghum b... 107 8e-023
gb|CF481958.1|CF481958 POL1_75_H12.b1_A002 Pollen Sorghum b... 107 8e-023
gb|CF482465.1|CF482465 POL1_7_C12.b1_A002 Pollen Sorghum bi... 107 8e-023
gb|CF489379.1|CF489379 POL1_57_F01.b1_A002 Pollen Sorghum b... 107 8e-023
gb|BG465260.1|BG465260 EM1_74_A05.g1_A002 Embryo 1 (EM1) So... 107 1e-022
gb|CB925747.1|CB925747 ABA1_23_E07.b1_A012 Abscisic acid-tr... 51 1e-022
gb|CF480644.1|CF480644 POL1_67_B04.b1_A002 Pollen Sorghum b... 105 3e-022
gb|CF487185.1|CF487185 POL1_42_F11.b1_A002 Pollen Sorghum b... 105 3e-022
gb|CX615975.1|CX615975 GABR1_25_C07.b1_A002 GA- or brassino... 74 5e-022
gb|CF488132.1|CF488132 POL1_48_A10.b1_A002 Pollen Sorghum b... 103 2e-021
gb|CW046110.1|CW046110 104_283_10509970_114_30137 Sorghum m... 69 4e-021
gb|AI724130.1|AI724130 RHIZ1_7_B04.y2_A001 Rhizome1 (RHIZ1)... 100 1e-020
>gb|CX607675.1|CX607675 ANR1_30_C08.b1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_30_C08_A002 3', mRNA sequence
Length = 743
Score = 235 bits (507), Expect = 4e-061
Identities = 99/129 (76%), Positives = 106/129 (82%)
Frame = +2 / +2
Query: 5 ASEDLQERXXXFFRVFRDGHGKPKVLMCTDPTKXXLSPDLYKPTFXXFVDADISXXXITL 184
AS DLQE+ FFRV +DG+GKPKVLMCTDPTK LSPDLYKPTF FVD DIS I L
Sbjct: 38 ASADLQEKTAVFFRVSKDGYGKPKVLMCTDPTKSSLSPDLYKPTFAGFVDTDISSGKIAL 217
Query: 185 RSLIDRSXVESFGAGGKTCILSRVYPSIAVGKDAHLYVFNNGEXDVTXSGLTAWEMKKPL 364
RSLIDRS VESFG G+TCILSRVYPSIA+GK+AHLYVFNNG+ DV S LTAWEMKKPL
Sbjct: 218 RSLIDRSVVESFGEKGRTCILSRVYPSIAIGKEAHLYVFNNGDVDVKVSSLTAWEMKKPL 397
Query: 365 MNGA*N*RE 391
MNGA* RE
Sbjct: 398 MNGA**KRE 424
Score = 193 bits (417), Expect = 1e-048
Identities = 91/124 (73%), Positives = 96/124 (77%)
Frame = -2 / -3
Query: 375 APFIXGFFISQAVRPXXVTSXSPLLKT*R*ASFPTAMDGYTRDRMHVLPPAPKLSTXDRS 196
APFI GFFIS AVR +TS SPLLKT*R*ASFP AMDG TRDRM VLP +PKLST DRS
Sbjct: 408 APFISGFFISHAVRLDTLTSTSPLLKT*R*ASFPMAMDG*TRDRMQVLPFSPKLSTTDRS 229
Query: 195 IKLLRVXXXXEMSASTKXXKVGLYRSGLRXXLVGSVHMSTLGLPCPSLKTLKXXXXRSCR 16
IKLLR EMS STK KVGLYRSGL LVGSVHMSTLGLP PSL+TLK SC+
Sbjct: 228 IKLLRAIFPLEMSVSTKPAKVGLYRSGLSDDLVGSVHMSTLGLP*PSLETLKKTAVFSCK 49
Query: 15 SSEA 4
S+EA
Sbjct: 48 SAEA 37
Score = 161 bits (347), Expect = 4e-039
Identities = 80/124 (64%), Positives = 87/124 (70%)
Frame = -1 / -2
Query: 376 GAVHQXFLHLPGGQTGXXDVXLAVVENVEVSVLPDGDGRVHP*QDARLASRAEALDXGPI 197
GAVHQ LHLP Q DV + VVENVEVS+L +GDGRV P*QDA + AEALD GPI
Sbjct: 409 GAVHQRLLHLPCCQA*HLDVHVTVVENVEVSLLSNGDGRVDP*QDASPSFFAEALDHGPI 230
Query: 196 DQASKGDXXXRDVGVDEXXEGRLVQIRTKXXLGGVGAHEHLGLAVSVPEDPEEXXXXLLQ 17
DQASK + +V VDE EGRLVQI TK LGGVGAHEHLGLAV+V D EE LLQ
Sbjct: 229 DQASKSNLPA*NVSVDEAGEGRLVQIWTKR*LGGVGAHEHLGLAVAVLGDSEEDGRLLLQ 50
Query: 16 VFGG 5
V G
Sbjct: 49 VGRG 38
Score = 71.2 bits (149), Expect(2) = 3e-026
Identities = 31/62 (50%), Positives = 37/62 (59%)
Frame = +1 / +1
Query: 184 *KLDXXXXXXXXXXXXQDVHPVTGVPVHRRREGRSPLRFQQRRXXRHXXRSDRLGDEETX 363
*KLD +D+HPVTG+PVHR +G SPLRFQQR R + D +GDEE
Sbjct: 217 *KLDRSVRGRELRRKRKDLHPVTGLPVHRHWKGGSPLRFQQR*RGRQGVKPDSMGDEEAA 396
Query: 364 DE 369
DE
Sbjct: 397 DE 402
Score = 67.5 bits (141), Expect(2) = 3e-026
Identities = 31/44 (70%), Positives = 32/44 (72%)
Frame = +1 / +1
Query: 4 GLRRPAGAXXXXLQGLQGRTRQAQGAHVHRPHQXXS*SGSVQAD 135
GL R AG LQ LQGR RQAQGAHVHRPHQ +*S SVQAD
Sbjct: 37 GLCRLAGEDGRLLQSLQGRLRQAQGAHVHRPHQVIA*SRSVQAD 168
>gb|CX611907.1|CX611907 ANR1_27_H10.b1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_27_H10_A002 3', mRNA sequence
Length = 834
Score = 194 bits (418), Expect(2) = 6e-053
Identities = 80/107 (74%), Positives = 90/107 (84%)
Frame = +2 / +2
Query: 62 HGKPKVLMCTDPTKXXLSPDLYKPTFXXFVDADISXXXITLRSLIDRSXVESFGAGGKTC 241
+ KP VLMCTDPTK L+P+LY+PTF FVD DIS I+LRSLIDRS VESFGAGGKTC
Sbjct: 407 NNKPVVLMCTDPTKSSLNPNLYRPTFAGFVDTDISNGKISLRSLIDRSVVESFGAGGKTC 586
Query: 242 ILSRVYPSIAVGKDAHLYVFNNGEXDVTXSGLTAWEMKKPLMNGA*N 382
ILSRVYPS+A+G +A LYVFNNG+ DV S LTAWEMKKPLMNGA*+
Sbjct: 587 ILSRVYPSLAIGNNARLYVFNNGKADVRVSRLTAWEMKKPLMNGA*S 727
Score = 143 bits (306), Expect(2) = 4e-036
Identities = 68/103 (66%), Positives = 71/103 (68%)
Frame = -2 / -1
Query: 375 APFIXGFFISQAVRPXXVTSXSPLLKT*R*ASFPTAMDGYTRDRMHVLPPAPKLSTXDRS 196
APF+ GFFIS AVR +TS PLL T*R A P A DG T DRMHVLPPAPKLST +RS
Sbjct: 720 APFMSGFFISHAVRRDTLTSAFPLLNT*RRALLPMASDG*TLDRMHVLPPAPKLSTTERS 541
Query: 195 IKLLRVXXXXEMSASTKXXKVGLYRSGLRXXLVGSVHMSTLGL 67
IKLL EMS STK VG YR G R LVGSVHMST GL
Sbjct: 540 IKLLSDIFPFEMSVSTKPANVGRYRFGFRDDLVGSVHMSTTGL 412
Score = 103 bits (219), Expect = 2e-021
Identities = 51/107 (47%), Positives = 68/107 (63%)
Frame = -1 / -3
Query: 379 SGAVHQXFLHLPGGQTGXXDVXLAVVENVEVSVLPDGDGRVHP*QDARLASRAEALDXGP 200
S A+H+ LHLP +TG DV L VVE+VE V+ DG+ RV P QDARLA ++AL
Sbjct: 724 SCAIHEWLLHLPCSETGHPDVRLPVVEHVEARVVADGERRVDPGQDARLAPGSKALHHRA 545
Query: 199 IDQASKGDXXXRDVGVDEXXEGRLVQIRTKXXLGGVGAHEHLGLAVS 59
+DQAS+ +V V++ + R VQ+ + LG VGAHEH GL V+
Sbjct: 544 VDQASQRYLPI*NVRVNKTGKCRAVQVWVQRRLGRVGAHEHDGLVVA 404
Score = 34.1 bits (68), Expect(2) = 6e-053
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = +1 / +1
Query: 4 GLRRPAGAXXXXLQGLQGRTRQAQ 75
GLR+P G LQG+QGR RQ Q
Sbjct: 337 GLRQPQGENRGVLQGVQGRRRQQQ 408
Score = 29.0 bits (57), Expect(2) = 4e-036
Identities = 13/22 (59%), Positives = 14/22 (63%)
Frame = -3 / -2
Query: 68 CRVRP*RP*RXXXXAPAGLRRP 3
CR RP* P*R +P G RRP
Sbjct: 401 CRRRP*TP*RTPRFSP*GWRRP 336
>gb|CF071235.1|CF071235 FE1_16_A06.b1_A002 Iron-deficient seedlings Sorghum bicolor cDNA
clone FE1_16_A06_A002 3', mRNA sequence
Length = 658
Score = 207 bits (446), Expect = 1e-052
Identities = 87/111 (78%), Positives = 92/111 (82%)
Frame = +2 / +1
Query: 59 GHGKPKVLMCTDPTKXXLSPDLYKPTFXXFVDADISXXXITLRSLIDRSXVESFGAGGKT 238
G+GKPKVLMCTDP K LSPDLYKPTF FVD DIS I LRSLIDRS VESFG G+T
Sbjct: 1 GYGKPKVLMCTDPIKSSLSPDLYKPTFAGFVDTDISSGKIALRSLIDRSVVESFGEKGRT 180
Query: 239 CILSRVYPSIAVGKDAHLYVFNNGEXDVTXSGLTAWEMKKPLMNGA*N*RE 391
CILSRVYPSIA+GK+AHLYVFNNG+ DV S LTAWEMKKPLMNGA* RE
Sbjct: 181 CILSRVYPSIAIGKEAHLYVFNNGDVDVKVSSLTAWEMKKPLMNGA**KRE 333
Score = 169 bits (364), Expect = 2e-041
Identities = 79/104 (75%), Positives = 82/104 (78%)
Frame = -2 / -3
Query: 375 APFIXGFFISQAVRPXXVTSXSPLLKT*R*ASFPTAMDGYTRDRMHVLPPAPKLSTXDRS 196
APFI GFFIS AVR +TS SPLLKT*R*ASFP AMDG TRDRM VLP +PKLST DRS
Sbjct: 317 APFISGFFISHAVRLDTLTSTSPLLKT*R*ASFPMAMDG*TRDRMQVLPFSPKLSTTDRS 138
Query: 195 IKLLRVXXXXEMSASTKXXKVGLYRSGLRXXLVGSVHMSTLGLP 64
IKLLR EMS STK KVGLYRSGL L+GSVHMSTLGLP
Sbjct: 137 IKLLRAIFPLEMSVSTKPAKVGLYRSGLSDDLMGSVHMSTLGLP 6
Score = 145 bits (312), Expect = 3e-034
Identities = 70/106 (66%), Positives = 77/106 (72%)
Frame = -1 / -2
Query: 376 GAVHQXFLHLPGGQTGXXDVXLAVVENVEVSVLPDGDGRVHP*QDARLASRAEALDXGPI 197
GAVHQ LHLP Q DV + VVENVEVS+L +GDGRV P*QDA + AEALD GPI
Sbjct: 318 GAVHQRLLHLPCCQA*HLDVHVTVVENVEVSLLSNGDGRVDP*QDASPSFFAEALDHGPI 139
Query: 196 DQASKGDXXXRDVGVDEXXEGRLVQIRTKXXLGGVGAHEHLGLAVS 59
DQASK + +V VDE EGRLVQI TK L GVGAHEHLGLAV+
Sbjct: 138 DQASKSNLPA*NVSVDEAGEGRLVQIWTKR*LDGVGAHEHLGLAVA 1
>gb|CX618736.1|CX618736 GABR1_41_H05.b1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_41_H05_A002 3', mRNA sequence
Length = 642
Score = 206 bits (444), Expect = 2e-052
Identities = 87/109 (79%), Positives = 91/109 (83%)
Frame = +2 / +1
Query: 65 GKPKVLMCTDPTKXXLSPDLYKPTFXXFVDADISXXXITLRSLIDRSXVESFGAGGKTCI 244
GKPKVLMCTDPTK LSPDLYKPTF FVD DIS I LRSLIDRS VESFG G+TCI
Sbjct: 1 GKPKVLMCTDPTKSSLSPDLYKPTFAGFVDTDISSGKIALRSLIDRSVVESFGEKGRTCI 180
Query: 245 LSRVYPSIAVGKDAHLYVFNNGEXDVTXSGLTAWEMKKPLMNGA*N*RE 391
LSRVYPSIA+GK+AHLYVFNNG+ DV S LTAWEMKKPLMNGA* RE
Sbjct: 181 LSRVYPSIAIGKEAHLYVFNNGDVDVKVSSLTAWEMKKPLMNGA**KRE 327
Score = 167 bits (360), Expect = 7e-041
Identities = 79/103 (76%), Positives = 81/103 (78%)
Frame = -2 / -2
Query: 375 APFIXGFFISQAVRPXXVTSXSPLLKT*R*ASFPTAMDGYTRDRMHVLPPAPKLSTXDRS 196
APFI GFFIS AVR +TS SPLLKT*R*ASFP AMDG TRDRM VLP +PKLST DRS
Sbjct: 311 APFISGFFISHAVRLDTLTSTSPLLKT*R*ASFPMAMDG*TRDRMQVLPFSPKLSTTDRS 132
Query: 195 IKLLRVXXXXEMSASTKXXKVGLYRSGLRXXLVGSVHMSTLGL 67
IKLLR EMS STK KVGLYRSGL LVGSVHMSTLGL
Sbjct: 131 IKLLRAIFPLEMSVSTKPAKVGLYRSGLSDDLVGSVHMSTLGL 3
Score = 146 bits (314), Expect = 2e-034
Identities = 70/104 (67%), Positives = 76/104 (73%)
Frame = -1 / -1
Query: 376 GAVHQXFLHLPGGQTGXXDVXLAVVENVEVSVLPDGDGRVHP*QDARLASRAEALDXGPI 197
GAVHQ LHLP Q DV + VVENVEVS+L +GDGRV P*QDA + AEALD GPI
Sbjct: 312 GAVHQRLLHLPCCQA*HLDVHVTVVENVEVSLLSNGDGRVDP*QDASPSFFAEALDHGPI 133
Query: 196 DQASKGDXXXRDVGVDEXXEGRLVQIRTKXXLGGVGAHEHLGLA 65
DQASK + +V VDE EGRLVQI TK LGGVGAHEHLGLA
Sbjct: 132 DQASKSNLPA*NVSVDEAGEGRLVQIWTKR*LGGVGAHEHLGLA 1
>gb|CD222171.1|CD222171 CCC1_2_E04.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_2_E04_A007 3', mRNA sequence
Length = 634
Score = 203 bits (438), Expect = 1e-051
Identities = 86/108 (79%), Positives = 90/108 (83%)
Frame = +2 / +2
Query: 68 KPKVLMCTDPTKXXLSPDLYKPTFXXFVDADISXXXITLRSLIDRSXVESFGAGGKTCIL 247
KPKVLMCTDPTK LSPDLYKPTF FVD DIS I LRSLIDRS VESFG G+TCIL
Sbjct: 2 KPKVLMCTDPTKSSLSPDLYKPTFAGFVDTDISSGKIALRSLIDRSVVESFGEKGRTCIL 181
Query: 248 SRVYPSIAVGKDAHLYVFNNGEXDVTXSGLTAWEMKKPLMNGA*N*RE 391
SRVYPSIA+GK+AHLYVFNNG+ DV S LTAWEMKKPLMNGA* RE
Sbjct: 182 SRVYPSIAIGKEAHLYVFNNGDVDVKVSSLTAWEMKKPLMNGA**KRE 325
Score = 165 bits (354), Expect = 5e-040
Identities = 77/103 (74%), Positives = 81/103 (78%)
Frame = -2 / -2
Query: 375 APFIXGFFISQAVRPXXVTSXSPLLKT*R*ASFPTAMDGYTRDRMHVLPPAPKLSTXDRS 196
APF+ GFFIS AV+ +TS SPLLKT*R*ASFP AMDG TRDRM VLP +PKLST DRS
Sbjct: 309 APFMSGFFISHAVKLDTLTSTSPLLKT*R*ASFPMAMDG*TRDRMQVLPFSPKLSTTDRS 130
Query: 195 IKLLRVXXXXEMSASTKXXKVGLYRSGLRXXLVGSVHMSTLGL 67
IKLLR EMS STK KVGLYRSGL LVGSVHMSTLGL
Sbjct: 129 IKLLRAIFPLEMSVSTKPAKVGLYRSGLSDDLVGSVHMSTLGL 1
Score = 146 bits (314), Expect = 2e-034
Identities = 69/103 (66%), Positives = 76/103 (73%)
Frame = -1 / -1
Query: 376 GAVHQXFLHLPGGQTGXXDVXLAVVENVEVSVLPDGDGRVHP*QDARLASRAEALDXGPI 197
GAVH+ FLHLP Q DV + VVENVEVS+L +GDGRV P*QDA + AEALD GPI
Sbjct: 310 GAVHERFLHLPRCQA*HLDVHVTVVENVEVSLLSNGDGRVDP*QDASPSFFAEALDHGPI 131
Query: 196 DQASKGDXXXRDVGVDEXXEGRLVQIRTKXXLGGVGAHEHLGL 68
DQASK + +V VDE EGRLVQI TK LGGVGAHEHLGL
Sbjct: 130 DQASKSNLPA*NVSVDEAGEGRLVQIWTKR*LGGVGAHEHLGL 2
>gb|CD228008.1|CD228008 CCC1_5_A09.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_5_A09_A007 3', mRNA sequence
Length = 638
Score = 203 bits (438), Expect = 1e-051
Identities = 86/108 (79%), Positives = 90/108 (83%)
Frame = +2 / +2
Query: 68 KPKVLMCTDPTKXXLSPDLYKPTFXXFVDADISXXXITLRSLIDRSXVESFGAGGKTCIL 247
KPKVLMCTDPTK LSPDLYKPTF FVD DIS I LRSLIDRS VESFG G+TCIL
Sbjct: 2 KPKVLMCTDPTKSSLSPDLYKPTFAGFVDTDISSGKIALRSLIDRSVVESFGEKGRTCIL 181
Query: 248 SRVYPSIAVGKDAHLYVFNNGEXDVTXSGLTAWEMKKPLMNGA*N*RE 391
SRVYPSIA+GK+AHLYVFNNG+ DV S LTAWEMKKPLMNGA* RE
Sbjct: 182 SRVYPSIAIGKEAHLYVFNNGDVDVKVSSLTAWEMKKPLMNGA**KRE 325
Score = 165 bits (354), Expect = 5e-040
Identities = 77/103 (74%), Positives = 81/103 (78%)
Frame = -2 / -3
Query: 375 APFIXGFFISQAVRPXXVTSXSPLLKT*R*ASFPTAMDGYTRDRMHVLPPAPKLSTXDRS 196
APF+ GFFIS AV+ +TS SPLLKT*R*ASFP AMDG TRDRM VLP +PKLST DRS
Sbjct: 309 APFMSGFFISHAVKLDTLTSTSPLLKT*R*ASFPMAMDG*TRDRMQVLPFSPKLSTTDRS 130
Query: 195 IKLLRVXXXXEMSASTKXXKVGLYRSGLRXXLVGSVHMSTLGL 67
IKLLR EMS STK KVGLYRSGL LVGSVHMSTLGL
Sbjct: 129 IKLLRAIFPLEMSVSTKPAKVGLYRSGLSDDLVGSVHMSTLGL 1
Score = 144 bits (310), Expect = 6e-034
Identities = 68/103 (66%), Positives = 76/103 (73%)
Frame = -1 / -2
Query: 376 GAVHQXFLHLPGGQTGXXDVXLAVVENVEVSVLPDGDGRVHP*QDARLASRAEALDXGPI 197
GAVH+ FLHLP Q DV + VVENV+VS+L +GDGRV P*QDA + AEALD GPI
Sbjct: 310 GAVHERFLHLPRCQA*HLDVHVTVVENVKVSLLSNGDGRVDP*QDASPSFFAEALDHGPI 131
Query: 196 DQASKGDXXXRDVGVDEXXEGRLVQIRTKXXLGGVGAHEHLGL 68
DQASK + +V VDE EGRLVQI TK LGGVGAHEHLGL
Sbjct: 130 DQASKSNLPA*NVSVDEAGEGRLVQIWTKR*LGGVGAHEHLGL 2
>gb|CN135656.1|CN135656 OX1_38_E07.b1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_38_E07_A002 3', mRNA sequence
Length = 813
Score = 125 bits (268), Expect(2) = 2e-049
Identities = 53/66 (80%), Positives = 57/66 (86%)
Frame = +2 / +3
Query: 194 IDRSXVESFGAGGKTCILSRVYPSIAVGKDAHLYVFNNGEXDVTXSGLTAWEMKKPLMNG 373
IDRS VESFG G+TCILSRVYPSIA+GK+AHLYVFNNG+ DV S LTAWEMKKPLMNG
Sbjct: 300 IDRSVVESFGEKGRTCILSRVYPSIAIGKEAHLYVFNNGDVDVKVSSLTAWEMKKPLMNG 479
Query: 374 A*N*RE 391
A* RE
Sbjct: 480 A**KRE 497
Score = 104 bits (221), Expect(2) = 8e-038
Identities = 48/61 (78%), Positives = 50/61 (81%)
Frame = -2 / -3
Query: 375 APFIXGFFISQAVRPXXVTSXSPLLKT*R*ASFPTAMDGYTRDRMHVLPPAPKLSTXDRS 196
APFI GFFIS AVR +TS SPLLKT*R*ASFP AMDG TRDRM VLP +PKLST DRS
Sbjct: 481 APFISGFFISHAVRLDTLTSTSPLLKT*R*ASFPMAMDG*TRDRMQVLPFSPKLSTTDRS 302
Query: 195 I 193
I
Sbjct: 301 I 299
Score = 92.3 bits (195), Expect(2) = 2e-049
Identities = 36/48 (75%), Positives = 39/48 (81%)
Frame = +2 / +3
Query: 53 RDGHGKPKVLMCTDPTKXXLSPDLYKPTFXXFVDADISXXXITLRSLI 196
+DG+GKPKVLMCTDPTK LSPDLYKPTF FVD DIS I LRSL+
Sbjct: 3 KDGYGKPKVLMCTDPTKSSLSPDLYKPTFAGFVDTDISSGKIALRSLV 146
Score = 84.9 bits (179), Expect(2) = 3e-030
Identities = 40/61 (65%), Positives = 44/61 (72%)
Frame = -1 / -2
Query: 376 GAVHQXFLHLPGGQTGXXDVXLAVVENVEVSVLPDGDGRVHP*QDARLASRAEALDXGPI 197
GAVHQ LHLP Q DV + VVENVEVS+L +GDGRV P*QDA + AEALD GPI
Sbjct: 482 GAVHQRLLHLPCCQA*HLDVHVTVVENVEVSLLSNGDGRVDP*QDASPSFFAEALDHGPI 303
Query: 196 D 194
D
Sbjct: 302 D 300
Score = 74.8 bits (157), Expect(2) = 8e-038
Identities = 35/47 (74%), Positives = 35/47 (74%)
Frame = -2 / -3
Query: 192 KLLRVXXXXEMSASTKXXKVGLYRSGLRXXLVGSVHMSTLGLPCPSL 52
KLLR EMS STK KVGLYRSGL LVGSVHMSTLGLP PSL
Sbjct: 142 KLLRAIFPLEMSVSTKPAKVGLYRSGLSDDLVGSVHMSTLGLP*PSL 2
Score = 68.9 bits (144), Expect(2) = 3e-030
Identities = 32/46 (69%), Positives = 35/46 (76%)
Frame = -1 / -2
Query: 193 QASKGDXXXRDVGVDEXXEGRLVQIRTKXXLGGVGAHEHLGLAVSV 56
QASK + +V VDE EGRLVQI TK LGGVGAHEHLGLAV+V
Sbjct: 143 QASKSNLPA*NVSVDEAGEGRLVQIWTKR*LGGVGAHEHLGLAVAV 6
Score = 68.9 bits (144), Expect(2) = 2e-021
Identities = 27/46 (58%), Positives = 33/46 (71%)
Frame = +1 / +2
Query: 232 QDVHPVTGVPVHRRREGRSPLRFQQRRXXRHXXRSDRLGDEETXDE 369
+D+HPVTG+PVHR +G SPLRFQQR R + D +GDEE DE
Sbjct: 338 KDLHPVTGLPVHRHWKGGSPLRFQQR*RGRQGVKPDSMGDEEAADE 475
Score = 55.1 bits (114), Expect(2) = 2e-021
Identities = 23/28 (82%), Positives = 24/28 (85%)
Frame = +1 / +2
Query: 52 QGRTRQAQGAHVHRPHQXXS*SGSVQAD 135
QGR RQAQGAHVHRPHQ +*S SVQAD
Sbjct: 2 QGRLRQAQGAHVHRPHQVIA*SRSVQAD 85
>gb|BE595751.1|BE595751 PI1_54_D08.g1_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 394
Score = 183 bits (394), Expect = 1e-045
Identities = 78/100 (78%), Positives = 82/100 (82%)
Frame = +2 / +2
Query: 92 DPTKXXLSPDLYKPTFXXFVDADISXXXITLRSLIDRSXVESFGAGGKTCILSRVYPSIA 271
DPTK LSPDLYKPTF FVD DIS I LRSLIDRS VESFG G+TCILSRVYPSIA
Sbjct: 2 DPTKSSLSPDLYKPTFAGFVDTDISSGKIALRSLIDRSVVESFGEKGRTCILSRVYPSIA 181
Query: 272 VGKDAHLYVFNNGEXDVTXSGLTAWEMKKPLMNGA*N*RE 391
+GK+AHLYVFNNG+ DV S LTAWEMKKPLMNGA* RE
Sbjct: 182 IGKEAHLYVFNNGDVDVKVSSLTAWEMKKPLMNGA**KRE 301
Score = 149 bits (320), Expect = 2e-035
Identities = 71/95 (74%), Positives = 73/95 (76%)
Frame = -2 / -2
Query: 375 APFIXGFFISQAVRPXXVTSXSPLLKT*R*ASFPTAMDGYTRDRMHVLPPAPKLSTXDRS 196
APFI GFFIS AVR +TS SPLLKT*R*ASFP AMDG TRDRM VLP +PKLST DRS
Sbjct: 285 APFISGFFISHAVRLDTLTSTSPLLKT*R*ASFPMAMDG*TRDRMQVLPFSPKLSTTDRS 106
Query: 195 IKLLRVXXXXEMSASTKXXKVGLYRSGLRXXLVGS 91
IKLLR EMS STK KVGLYRSGL LVGS
Sbjct: 105 IKLLRAIFPLEMSVSTKPAKVGLYRSGLSDDLVGS 1
Score = 124 bits (265), Expect = 9e-028
Identities = 61/95 (64%), Positives = 67/95 (70%)
Frame = -1 / -1
Query: 376 GAVHQXFLHLPGGQTGXXDVXLAVVENVEVSVLPDGDGRVHP*QDARLASRAEALDXGPI 197
GAVHQ LHLP Q DV + VVENVEVS+L +GDGRV P*QDA + AEALD GPI
Sbjct: 286 GAVHQRLLHLPCCQA*HLDVHVTVVENVEVSLLSNGDGRVDP*QDASPSFFAEALDHGPI 107
Query: 196 DQASKGDXXXRDVGVDEXXEGRLVQIRTKXXLGGV 92
DQASK + +V VDE EGRLVQI TK LGGV
Sbjct: 106 DQASKSNLPA*NVSVDEAGEGRLVQIWTKR*LGGV 2
>gb|CD227690.1|CD227690 CCC1_53_F01.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_53_F01_A007 3', mRNA sequence
Length = 656
Score = 182 bits (393), Expect = 2e-045
Identities = 79/113 (69%), Positives = 84/113 (74%)
Frame = +2 / +1
Query: 53 RDGHGKPKVLMCTDPTKXXLSPDLYKPTFXXFVDADISXXXITLRSLIDRSXVESFGAGG 232
R P+ PTK LSPDLYKPTF FVD DIS I LRSLIDRS VESFG G
Sbjct: 4 RTATASPRCSCAPTPTKSSLSPDLYKPTFAGFVDTDISSGKIALRSLIDRSVVESFGEKG 183
Query: 233 KTCILSRVYPSIAVGKDAHLYVFNNGEXDVTXSGLTAWEMKKPLMNGA*N*RE 391
+TCILSRVYPSIA+GK+AHLYVFNNG+ DV S LTAWEMKKPLMNGA* RE
Sbjct: 184 RTCILSRVYPSIAIGKEAHLYVFNNGDVDVKVSSLTAWEMKKPLMNGA**KRE 342
Score = 146 bits (313), Expect = 2e-034
Identities = 71/103 (68%), Positives = 75/103 (72%)
Frame = -2 / -1
Query: 375 APFIXGFFISQAVRPXXVTSXSPLLKT*R*ASFPTAMDGYTRDRMHVLPPAPKLSTXDRS 196
APF+ GFFIS AV+ +TS SPLLKT*R*ASFP AMDG TRDRM VLP +PKLST DRS
Sbjct: 326 APFMSGFFISHAVKLDTLTSTSPLLKT*R*ASFPMAMDG*TRDRMQVLPFSPKLSTTDRS 147
Query: 195 IKLLRVXXXXEMSASTKXXKVGLYRSGLRXXLVGSVHMSTLGL 67
IKLLR EMS STK KVGLYRSGL LVG LGL
Sbjct: 146 IKLLRAIFPLEMSVSTKPAKVGLYRSGLSDDLVGVGAHEHLGL 18
Score = 121 bits (259), Expect(2) = 6e-034
Identities = 59/93 (63%), Positives = 66/93 (70%)
Frame = -1 / -3
Query: 376 GAVHQXFLHLPGGQTGXXDVXLAVVENVEVSVLPDGDGRVHP*QDARLASRAEALDXGPI 197
GAVH+ FLHLP Q DV + VVENVEVS+L +GDGRV P*QDA + AEALD GPI
Sbjct: 327 GAVHERFLHLPRCQA*HLDVHVTVVENVEVSLLSNGDGRVDP*QDASPSFFAEALDHGPI 148
Query: 196 DQASKGDXXXRDVGVDEXXEGRLVQIRTKXXLG 98
DQASK + +V VDE EGRLVQI TK LG
Sbjct: 147 DQASKSNLPA*NVSVDEAGEGRLVQIWTKR*LG 49
Score = 43.2 bits (88), Expect(2) = 6e-034
Identities = 15/16 (93%), Positives = 15/16 (93%)
Frame = -3 / -3
Query: 98 WGRCT*APWACRVRP* 51
WGRCT*APWACR RP*
Sbjct: 48 WGRCT*APWACRSRP* 1
>gb|CD227870.1|CD227870 CCC1_56_A03.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_56_A03_A007 3', mRNA sequence
Length = 640
Score = 179 bits (385), Expect = 3e-044
Identities = 77/107 (71%), Positives = 82/107 (76%)
Frame = +2 / +2
Query: 71 PKVLMCTDPTKXXLSPDLYKPTFXXFVDADISXXXITLRSLIDRSXVESFGAGGKTCILS 250
P+ P K LSPDLYKPTF FVD DIS I LRSLIDRS VESFG G+TCILS
Sbjct: 14 PRCSCAPTPPKSSLSPDLYKPTFAGFVDTDISSGKIALRSLIDRSVVESFGEKGRTCILS 193
Query: 251 RVYPSIAVGKDAHLYVFNNGEXDVTXSGLTAWEMKKPLMNGA*N*RE 391
RVYPSIA+GK+AHLYVFNNG+ DV S LTAWEMKKPLMNGA* RE
Sbjct: 194 RVYPSIAIGKEAHLYVFNNGDVDVKVSSLTAWEMKKPLMNGA**KRE 334
Score = 143 bits (306), Expect = 2e-033
Identities = 70/103 (67%), Positives = 74/103 (71%)
Frame = -2 / -2
Query: 375 APFIXGFFISQAVRPXXVTSXSPLLKT*R*ASFPTAMDGYTRDRMHVLPPAPKLSTXDRS 196
APF+ GFFIS AV+ +TS SPLLKT*R*ASFP AMDG TRDRM VLP +PKLST DRS
Sbjct: 318 APFMSGFFISHAVKLDTLTSTSPLLKT*R*ASFPMAMDG*TRDRMQVLPFSPKLSTTDRS 139
Query: 195 IKLLRVXXXXEMSASTKXXKVGLYRSGLRXXLVGSVHMSTLGL 67
IKLLR EMS STK KVGLYRSGL L G LGL
Sbjct: 138 IKLLRAIFPLEMSVSTKPAKVGLYRSGLSDDLGGVGAHEHLGL 10
Score = 121 bits (259), Expect(2) = 2e-032
Identities = 59/93 (63%), Positives = 66/93 (70%)
Frame = -1 / -1
Query: 376 GAVHQXFLHLPGGQTGXXDVXLAVVENVEVSVLPDGDGRVHP*QDARLASRAEALDXGPI 197
GAVH+ FLHLP Q DV + VVENVEVS+L +GDGRV P*QDA + AEALD GPI
Sbjct: 319 GAVHERFLHLPRCQA*HLDVHVTVVENVEVSLLSNGDGRVDP*QDASPSFFAEALDHGPI 140
Query: 196 DQASKGDXXXRDVGVDEXXEGRLVQIRTKXXLG 98
DQASK + +V VDE EGRLVQI TK LG
Sbjct: 139 DQASKSNLPA*NVSVDEAGEGRLVQIWTKR*LG 41
Score = 38.2 bits (77), Expect(2) = 2e-032
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = -3 / -1
Query: 98 WGRCT*APWACR 63
WGRCT*APWACR
Sbjct: 40 WGRCT*APWACR 5
>gb|CW269966.1|CW269966 104_741_11402135_116_35322_090 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11402135, DNA
sequence
Length = 677
Score = 125 bits (268), Expect(2) = 1e-037
Identities = 53/66 (80%), Positives = 57/66 (86%)
Frame = +2 / -1
Query: 194 IDRSXVESFGAGGKTCILSRVYPSIAVGKDAHLYVFNNGEXDVTXSGLTAWEMKKPLMNG 373
IDRS VESFG G+TCILSRVYPSIA+GK+AHLYVFNNG+ DV S LTAWEMKKPLMNG
Sbjct: 284 IDRSVVESFGEKGRTCILSRVYPSIAIGKEAHLYVFNNGDVDVKVSSLTAWEMKKPLMNG 105
Query: 374 A*N*RE 391
A* RE
Sbjct: 104 A**KRE 87
Score = 104 bits (221), Expect(2) = 5e-028
Identities = 48/61 (78%), Positives = 50/61 (81%)
Frame = -2 / +1
Query: 375 APFIXGFFISQAVRPXXVTSXSPLLKT*R*ASFPTAMDGYTRDRMHVLPPAPKLSTXDRS 196
APFI GFFIS AVR +TS SPLLKT*R*ASFP AMDG TRDRM VLP +PKLST DRS
Sbjct: 103 APFISGFFISHAVRLDTLTSTSPLLKT*R*ASFPMAMDG*TRDRMQVLPFSPKLSTTDRS 282
Query: 195 I 193
I
Sbjct: 283 I 285
Score = 52.4 bits (108), Expect(2) = 1e-037
Identities = 21/32 (65%), Positives = 23/32 (71%)
Frame = +2 / -1
Query: 101 KXXLSPDLYKPTFXXFVDADISXXXITLRSLI 196
+ LSPDLYKPTF FVD DIS I LRSL+
Sbjct: 533 RSSLSPDLYKPTFAGFVDTDISSGKIALRSLV 438
Score = 41.8 bits (85), Expect(2) = 5e-028
Identities = 20/31 (64%), Positives = 20/31 (64%)
Frame = -2 / +1
Query: 192 KLLRVXXXXEMSASTKXXKVGLYRSGLRXXL 100
KLLR EMS STK KVGLYRSGL L
Sbjct: 442 KLLRAIFPLEMSVSTKPAKVGLYRSGLSDDL 534
>gb|CF483429.1|CF483429 POL1_22_E10.b1_A002 Pollen Sorghum bicolor cDNA clone
POL1_22_E10_A002 3', mRNA sequence
Length = 580
Score = 107 bits (229), Expect(2) = 4e-036
Identities = 44/65 (67%), Positives = 52/65 (80%)
Frame = +2 / +3
Query: 176 ITLRSLIDRSXVESFGAGGKTCILSRVYPSIAVGKDAHLYVFNNGEXDVTXSGLTAWEMK 355
I LR+LID S VESFGAGG+TCILSRVYP A+G +AHL+VFN+GE DV + L AWEM+
Sbjct: 243 IALRTLIDHSVVESFGAGGRTCILSRVYPKKALGDNAHLFVFNHGEVDVKVAKLDAWEMR 422
Query: 356 KPLMN 370
P MN
Sbjct: 423 TPKMN 437
Score = 64.3 bits (134), Expect(2) = 4e-036
Identities = 26/54 (48%), Positives = 32/54 (59%)
Frame = +2 / +3
Query: 5 ASEDLQERXXXFFRVFRDGHGKPKVLMCTDPTKXXLSPDLYKPTFXXFVDADIS 166
A+ DL ER FFRVFR + VLMC DPT +Y+PTF FV+ DI+
Sbjct: 69 AAGDLTERTAVFFRVFRTNTSRLVVLMCNDPTNSTFEAQVYRPTFASFVNHDIA 230
>gb|CL181798.1|CL181798 104_392_10896983_148_31925_359 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10896983, DNA
sequence
Length = 684
Score = 129 bits (277), Expect(2) = 7e-036
Identities = 53/63 (84%), Positives = 57/63 (90%)
Frame = +2 / -1
Query: 194 IDRSXVESFGAGGKTCILSRVYPSIAVGKDAHLYVFNNGEXDVTXSGLTAWEMKKPLMNG 373
IDRS VESFGAGGKTCILSRVYPS+A+GK+A LYVFNNG+ DV S LTAWEMKKPLMNG
Sbjct: 276 IDRSVVESFGAGGKTCILSRVYPSLAIGKNARLYVFNNGKADVKVSSLTAWEMKKPLMNG 97
Query: 374 A*N 382
A*N
Sbjct: 96 A*N 88
Score = 100 bits (212), Expect(2) = 2e-023
Identities = 45/67 (67%), Positives = 50/67 (74%)
Frame = -2 / +2
Query: 381 FQAPFIXGFFISQAVRPXXVTSXSPLLKT*R*ASFPTAMDGYTRDRMHVLPPAPKLSTXD 202
FQAPF+ GFFIS AVR +TS PLL T*R A P A DG T +RMHVLPPAPKLST D
Sbjct: 89 FQAPFMSGFFISHAVRLDTLTSAFPLLNT*RRAFLPMASDG*TLERMHVLPPAPKLSTTD 268
Query: 201 RSIKLLR 181
RSI ++R
Sbjct: 269 RSICIIR 289
Score = 41.4 bits (84), Expect(2) = 7e-036
Identities = 16/32 (50%), Positives = 22/32 (68%)
Frame = +2 / -2
Query: 101 KXXLSPDLYKPTFXXFVDADISXXXITLRSLI 196
+ L P+LY+PTF FV DIS I+LRS++
Sbjct: 479 RSSLDPNLYQPTFAGFVVTDISNGKISLRSMV 384
Score = 29.5 bits (58), Expect(2) = 2e-023
Identities = 15/30 (50%), Positives = 16/30 (53%)
Frame = -2 / +1
Query: 189 LLRVXXXXEMSASTKXXKVGLYRSGLRXXL 100
LLR EMS +TK VG YR G R L
Sbjct: 391 LLREILPLEMSVTTKPANVGWYRFGSRDDL 480
>gb|CW151042.1|CW151042 104_551_11143730_148_36309_003 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11143730, DNA
sequence
Length = 554
Score = 124 bits (265), Expect(2) = 3e-035
Identities = 51/63 (80%), Positives = 56/63 (88%)
Frame = +2 / -1
Query: 194 IDRSXVESFGAGGKTCILSRVYPSIAVGKDAHLYVFNNGEXDVTXSGLTAWEMKKPLMNG 373
IDRS VESFGAGGKTCILSRVYPS+A+G +A LYVFNNG+ DV S LTAWEMKKPLMNG
Sbjct: 377 IDRSVVESFGAGGKTCILSRVYPSLAIGNNARLYVFNNGKADVRVSRLTAWEMKKPLMNG 198
Query: 374 A*N 382
A*+
Sbjct: 197 A*S 189
Score = 92.7 bits (196), Expect(2) = 9e-021
Identities = 42/61 (68%), Positives = 45/61 (73%)
Frame = -2 / +1
Query: 375 APFIXGFFISQAVRPXXVTSXSPLLKT*R*ASFPTAMDGYTRDRMHVLPPAPKLSTXDRS 196
APF+ GFFIS AVR +TS PLL T*R A P A DG T DRMHVLPPAPKLST +RS
Sbjct: 196 APFMSGFFISHAVRRDTLTSAFPLLNT*RRALLPMASDG*TLDRMHVLPPAPKLSTTERS 375
Query: 195 I 193
I
Sbjct: 376 I 378
Score = 44.6 bits (91), Expect(2) = 3e-035
Identities = 17/28 (60%), Positives = 22/28 (78%)
Frame = +2 / -1
Query: 113 SPDLYKPTFXXFVDADISXXXITLRSLI 196
+P+LY+PTF FVD DIS I+LRSL+
Sbjct: 554 NPNLYRPTFAGFVDTDISNGKISLRSLV 471
Score = 27.6 bits (54), Expect(2) = 9e-021
Identities = 14/26 (53%), Positives = 14/26 (53%)
Frame = -2 / +1
Query: 192 KLLRVXXXXEMSASTKXXKVGLYRSG 115
KLL EMS STK VG YR G
Sbjct: 475 KLLSDIFPFEMSVSTKPANVGRYRFG 552
>gb|CW231622.1|CW231622 104_681_11211220_148_37350_016 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11211220, DNA
sequence
Length = 688
Score = 121 bits (259), Expect(2) = 9e-035
Identities = 49/61 (80%), Positives = 52/61 (85%)
Frame = +2 / +2
Query: 194 IDRSXVESFGAGGKTCILSRVYPSIAVGKDAHLYVFNNGEXDVTXSGLTAWEMKKPLMNG 373
IDRS VESFGAGGKTCILSRVYPS+A+G AHLYVFNNG DV S L AWEMKKP+MNG
Sbjct: 371 IDRSVVESFGAGGKTCILSRVYPSLAIGNKAHLYVFNNGRADVKVSRLIAWEMKKPVMNG 550
Query: 374 A 376
A
Sbjct: 551 A 553
Score = 95.5 bits (202), Expect(2) = 4e-022
Identities = 42/61 (68%), Positives = 46/61 (75%)
Frame = -2 / -2
Query: 375 APFIXGFFISQAVRPXXVTSXSPLLKT*R*ASFPTAMDGYTRDRMHVLPPAPKLSTXDRS 196
APF+ GFFIS A+R +TS PLL T*R*A P A DGYT +RMHVLPPAPKLST D S
Sbjct: 552 APFMTGFFISHAMRRDTLTSALPLLNT*R*ALLPMASDGYTLERMHVLPPAPKLSTTDLS 373
Query: 195 I 193
I
Sbjct: 372 I 370
Score = 46.0 bits (94), Expect(2) = 9e-035
Identities = 17/32 (53%), Positives = 24/32 (75%)
Frame = +2 / +1
Query: 101 KXXLSPDLYKPTFXXFVDADISXXXITLRSLI 196
+ L+P+LY+PTF FVD DIS I+LR+L+
Sbjct: 178 RSSLNPNLYRPTFAGFVDTDISNGKISLRTLV 273
Score = 29.5 bits (58), Expect(2) = 4e-022
Identities = 15/31 (48%), Positives = 16/31 (51%)
Frame = -2 / -3
Query: 192 KLLRVXXXXEMSASTKXXKVGLYRSGLRXXL 100
K+L EMS STK VG YR G R L
Sbjct: 269 KVLSDIFPFEMSVSTKPANVGRYRFGFRDDL 177
>gb|CW231621.1|CW231621 104_681_11211220_116_37346_016 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11211220, DNA
sequence
Length = 633
Score = 121 bits (259), Expect(2) = 9e-035
Identities = 49/61 (80%), Positives = 52/61 (85%)
Frame = +2 / -2
Query: 194 IDRSXVESFGAGGKTCILSRVYPSIAVGKDAHLYVFNNGEXDVTXSGLTAWEMKKPLMNG 373
IDRS VESFGAGGKTCILSRVYPS+A+G AHLYVFNNG DV S L AWEMKKP+MNG
Sbjct: 341 IDRSVVESFGAGGKTCILSRVYPSLAIGNKAHLYVFNNGRADVKVSRLIAWEMKKPVMNG 162
Query: 374 A 376
A
Sbjct: 161 A 159
Score = 95.5 bits (202), Expect(2) = 4e-022
Identities = 42/61 (68%), Positives = 46/61 (75%)
Frame = -2 / +1
Query: 375 APFIXGFFISQAVRPXXVTSXSPLLKT*R*ASFPTAMDGYTRDRMHVLPPAPKLSTXDRS 196
APF+ GFFIS A+R +TS PLL T*R*A P A DGYT +RMHVLPPAPKLST D S
Sbjct: 160 APFMTGFFISHAMRRDTLTSALPLLNT*R*ALLPMASDGYTLERMHVLPPAPKLSTTDLS 339
Query: 195 I 193
I
Sbjct: 340 I 342
Score = 46.0 bits (94), Expect(2) = 9e-035
Identities = 17/32 (53%), Positives = 24/32 (75%)
Frame = +2 / -1
Query: 101 KXXLSPDLYKPTFXXFVDADISXXXITLRSLI 196
+ L+P+LY+PTF FVD DIS I+LR+L+
Sbjct: 534 RSSLNPNLYRPTFAGFVDTDISNGKISLRTLV 439
Score = 29.5 bits (58), Expect(2) = 4e-022
Identities = 15/31 (48%), Positives = 16/31 (51%)
Frame = -2 / +2
Query: 192 KLLRVXXXXEMSASTKXXKVGLYRSGLRXXL 100
K+L EMS STK VG YR G R L
Sbjct: 443 KVLSDIFPFEMSVSTKPANVGRYRFGFRDDL 535
>gb|BZ781398.1|BZ781398 ii28f12.g1 WGS-SbicolorF (DH5a methyl filtered) Sorghum bicolor
genomic clone ii28f12, DNA sequence
Length = 537
Score = 99.6 bits (211), Expect(2) = 1e-033
Identities = 40/59 (67%), Positives = 47/59 (79%)
Frame = +2 / -2
Query: 194 IDRSXVESFGAGGKTCILSRVYPSIAVGKDAHLYVFNNGEXDVTXSGLTAWEMKKPLMN 370
ID S VESFGAGG+TCILSRVYP A+G +AHL+VFN+GE DV + L AWEM+ P MN
Sbjct: 203 IDHSVVESFGAGGRTCILSRVYPKKALGDNAHLFVFNHGEVDVKVAKLDAWEMRTPKMN 27
Score = 64.3 bits (134), Expect(2) = 1e-033
Identities = 26/54 (48%), Positives = 32/54 (59%)
Frame = +2 / -3
Query: 5 ASEDLQERXXXFFRVFRDGHGKPKVLMCTDPTKXXLSPDLYKPTFXXFVDADIS 166
A+ DL ER FFRVFR + VLMC DPT +Y+PTF FV+ DI+
Sbjct: 484 ATGDLTERTAVFFRVFRTNTSRLVVLMCNDPTNSTFEAQVYRPTFASFVNHDIA 323
>gb|CD204280.1|CD204280 HS1_7_F03.b1_A012 Heat-shocked seedlings Sorghum bicolor cDNA clone
HS1_7_F03_A012 3', mRNA sequence
Length = 552
Score = 139 bits (298), Expect = 3e-032
Identities = 61/77 (79%), Positives = 64/77 (83%)
Frame = +2 / +3
Query: 161 ISXXXITLRSLIDRSXVESFGAGGKTCILSRVYPSIAVGKDAHLYVFNNGEXDVTXSGLT 340
IS I LRSLIDRS VESFG G+TCILSRVYPSIA+GK+AHLYVFNNGE DV S LT
Sbjct: 3 ISSGKIALRSLIDRSVVESFGEKGRTCILSRVYPSIAIGKEAHLYVFNNGEVDVKVSSLT 182
Query: 341 AWEMKKPLMNGA*N*RE 391
AWEMKKPLMNGA* RE
Sbjct: 183 AWEMKKPLMNGA**KRE 233
Score = 114 bits (244), Expect = 7e-025
Identities = 54/72 (75%), Positives = 56/72 (77%)
Frame = -2 / -3
Query: 375 APFIXGFFISQAVRPXXVTSXSPLLKT*R*ASFPTAMDGYTRDRMHVLPPAPKLSTXDRS 196
APFI GFFIS AVR +TS SPLLKT*R*ASFP AMDG TRDRM VLP +PKLST DRS
Sbjct: 217 APFISGFFISHAVRLDTLTSTSPLLKT*R*ASFPMAMDG*TRDRMQVLPFSPKLSTTDRS 38
Query: 195 IKLLRVXXXXEM 160
IKLLR EM
Sbjct: 37 IKLLRAIFPLEM 2
>gb|CF485997.1|CF485997 POL1_35_C03.b1_A002 Pollen Sorghum bicolor cDNA clone
POL1_35_C03_A002 3', mRNA sequence
Length = 584
Score = 107 bits (229), Expect(2) = 1e-031
Identities = 44/65 (67%), Positives = 52/65 (80%)
Frame = +2 / +3
Query: 176 ITLRSLIDRSXVESFGAGGKTCILSRVYPSIAVGKDAHLYVFNNGEXDVTXSGLTAWEMK 355
I LR+LID S VESFGAGG+TCILSRVYP A+G +AHL+VFN+GE DV + L AWEM+
Sbjct: 138 IALRTLIDHSVVESFGAGGRTCILSRVYPKKALGDNAHLFVFNHGEVDVKVAKLDAWEMR 317
Query: 356 KPLMN 370
P MN
Sbjct: 318 TPKMN 332
Score = 49.2 bits (101), Expect(2) = 1e-031
Identities = 19/41 (46%), Positives = 24/41 (58%)
Frame = +2 / +3
Query: 44 RVFRDGHGKPKVLMCTDPTKXXLSPDLYKPTFXXFVDADIS 166
RVFR + VLMC DPT +Y+PTF FV+ DI+
Sbjct: 3 RVFRTNTSRLVVLMCNDPTNSTFEAQVYRPTFASFVNHDIA 125
>gb|CF482955.1|CF482955 POL1_10_G04.b1_A002 Pollen Sorghum bicolor cDNA clone
POL1_10_G04_A002 3', mRNA sequence
Length = 568
Score = 107 bits (229), Expect(2) = 1e-031
Identities = 44/65 (67%), Positives = 52/65 (80%)
Frame = +2 / +3
Query: 176 ITLRSLIDRSXVESFGAGGKTCILSRVYPSIAVGKDAHLYVFNNGEXDVTXSGLTAWEMK 355
I LR+LID S VESFGAGG+TCILSRVYP A+G +AHL+VFN+GE DV + L AWEM+
Sbjct: 138 IALRTLIDHSVVESFGAGGRTCILSRVYPKKALGDNAHLFVFNHGEVDVKVAKLDAWEMR 317
Query: 356 KPLMN 370
P MN
Sbjct: 318 TPKMN 332
Score = 49.2 bits (101), Expect(2) = 1e-031
Identities = 19/41 (46%), Positives = 24/41 (58%)
Frame = +2 / +3
Query: 44 RVFRDGHGKPKVLMCTDPTKXXLSPDLYKPTFXXFVDADIS 166
RVFR + VLMC DPT +Y+PTF FV+ DI+
Sbjct: 3 RVFRTNTSRLVVLMCNDPTNSTFEAQVYRPTFASFVNHDIA 125
>gb|CD204160.1|CD204160 HS1_4_A06.b1_A012 Heat-shocked seedlings Sorghum bicolor cDNA clone
HS1_4_A06_A012 3', mRNA sequence
Length = 542
Score = 136 bits (292), Expect = 2e-031
Identities = 59/72 (81%), Positives = 62/72 (86%)
Frame = +2 / +1
Query: 176 ITLRSLIDRSXVESFGAGGKTCILSRVYPSIAVGKDAHLYVFNNGEXDVTXSGLTAWEMK 355
I LRSLIDRS VESFG G+TCILSRVYPSIA+GK+AHLYVFNNGE DV S LTAWEMK
Sbjct: 10 IALRSLIDRSVVESFGEKGRTCILSRVYPSIAIGKEAHLYVFNNGEVDVKVSSLTAWEMK 189
Query: 356 KPLMNGA*N*RE 391
KPLMNGA* RE
Sbjct: 190 KPLMNGA**KRE 225
Score = 112 bits (239), Expect = 4e-024
Identities = 52/65 (80%), Positives = 54/65 (83%)
Frame = -2 / -1
Query: 375 APFIXGFFISQAVRPXXVTSXSPLLKT*R*ASFPTAMDGYTRDRMHVLPPAPKLSTXDRS 196
APFI GFFIS AVR +TS SPLLKT*R*ASFP AMDG TRDRM VLP +PKLST DRS
Sbjct: 209 APFISGFFISHAVRLDTLTSTSPLLKT*R*ASFPMAMDG*TRDRMQVLPFSPKLSTTDRS 30
Query: 195 IKLLR 181
IKLLR
Sbjct: 29 IKLLR 15
>gb|CF770834.1|CF770834 DSBF1_10_C07.g1_A010 Drought-stressed before flowering Sorghum
bicolor cDNA clone DSBF1_10_C07_A010 3', mRNA sequence
Length = 530
Score = 136 bits (292), Expect = 2e-031
Identities = 59/72 (81%), Positives = 62/72 (86%)
Frame = +2 / +2
Query: 176 ITLRSLIDRSXVESFGAGGKTCILSRVYPSIAVGKDAHLYVFNNGEXDVTXSGLTAWEMK 355
I LRSLIDRS VESFG G+TCILSRVYPSIA+GK+AHLYVFNNGE DV S LTAWEMK
Sbjct: 2 IALRSLIDRSVVESFGEKGRTCILSRVYPSIAIGKEAHLYVFNNGEVDVKVSSLTAWEMK 181
Query: 356 KPLMNGA*N*RE 391
KPLMNGA* RE
Sbjct: 182 KPLMNGA**KRE 217
Score = 112 bits (239), Expect = 4e-024
Identities = 52/65 (80%), Positives = 54/65 (83%)
Frame = -2 / -3
Query: 375 APFIXGFFISQAVRPXXVTSXSPLLKT*R*ASFPTAMDGYTRDRMHVLPPAPKLSTXDRS 196
APFI GFFIS AVR +TS SPLLKT*R*ASFP AMDG TRDRM VLP +PKLST DRS
Sbjct: 201 APFISGFFISHAVRLDTLTSTSPLLKT*R*ASFPMAMDG*TRDRMQVLPFSPKLSTTDRS 22
Query: 195 IKLLR 181
IKLLR
Sbjct: 21 IKLLR 7
>gb|CD222173.1|CD222173 CCC1_2_D02.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_2_D02_A007 3', mRNA sequence
Length = 554
Score = 133 bits (285), Expect = 2e-030
Identities = 57/70 (81%), Positives = 61/70 (87%)
Frame = +2 / +2
Query: 182 LRSLIDRSXVESFGAGGKTCILSRVYPSIAVGKDAHLYVFNNGEXDVTXSGLTAWEMKKP 361
LRSLIDRS VESFG G+TCILSRVYPSIA+GK+AHLYVFNNG+ DV S LTAWEMKKP
Sbjct: 32 LRSLIDRSVVESFGEKGRTCILSRVYPSIAIGKEAHLYVFNNGDVDVKVSSLTAWEMKKP 211
Query: 362 LMNGA*N*RE 391
LMNGA* RE
Sbjct: 212 LMNGA**KRE 241
Score = 109 bits (233), Expect = 2e-023
Identities = 50/65 (76%), Positives = 54/65 (83%)
Frame = -2 / -3
Query: 375 APFIXGFFISQAVRPXXVTSXSPLLKT*R*ASFPTAMDGYTRDRMHVLPPAPKLSTXDRS 196
APF+ GFFIS AV+ +TS SPLLKT*R*ASFP AMDG TRDRM VLP +PKLST DRS
Sbjct: 225 APFMSGFFISHAVKLDTLTSTSPLLKT*R*ASFPMAMDG*TRDRMQVLPFSPKLSTTDRS 46
Query: 195 IKLLR 181
IKLLR
Sbjct: 45 IKLLR 31
>gb|CN127791.1|CN127791 RHOH1_25_C09.b1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_25_C09_A002 3', mRNA sequence
Length = 809
Score = 107 bits (228), Expect(2) = 2e-029
Identities = 42/54 (77%), Positives = 45/54 (83%)
Frame = +2 / +3
Query: 5 ASEDLQERXXXFFRVFRDGHGKPKVLMCTDPTKXXLSPDLYKPTFXXFVDADIS 166
AS DLQE+ FFRVF+DG+GKPKVLMCTDPTK LSPDLYKPTF FVD DIS
Sbjct: 345 ASADLQEKTAVFFRVFKDGYGKPKVLMCTDPTKSSLSPDLYKPTFAGFVDTDIS 506
Score = 90.0 bits (190), Expect(2) = 7e-021
Identities = 41/54 (75%), Positives = 42/54 (77%)
Frame = -2 / -2
Query: 165 EMSASTKXXKVGLYRSGLRXXLVGSVHMSTLGLPCPSLKTLKXXXXRSCRSSEA 4
EMS STK KVGLYRSGL LVGSVHMSTLGLP PSLKTLK SCRS+EA
Sbjct: 505 EMSVSTKPAKVGLYRSGLSDDLVGSVHMSTLGLP*PSLKTLKKTAVFSCRSAEA 344
Score = 43.7 bits (89), Expect(2) = 2e-029
Identities = 20/28 (71%), Positives = 20/28 (71%)
Frame = +2 / +3
Query: 308 GEXDVTXSGLTAWEMKKPLMNGA*N*RE 391
G D S LTAWEMKKPLMNGA* RE
Sbjct: 483 GFVDTDISSLTAWEMKKPLMNGA**KRE 566
Score = 32.2 bits (64), Expect(2) = 7e-021
Identities = 14/23 (60%), Positives = 14/23 (60%)
Frame = -2 / -2
Query: 375 APFIXGFFISQAVRPXXVTSXSP 307
APFI GFFIS AVR S P
Sbjct: 550 APFISGFFISHAVRLEMSVSTKP 482
>gb|CW306883.1|CW306883 104_792_11467079_148_35713_084 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11467079, DNA
sequence
Length = 624
Score = 129 bits (277), Expect = 2e-029
Identities = 53/63 (84%), Positives = 57/63 (90%)
Frame = +2 / +1
Query: 194 IDRSXVESFGAGGKTCILSRVYPSIAVGKDAHLYVFNNGEXDVTXSGLTAWEMKKPLMNG 373
IDRS VESFGAGGKTCILSRVYPS+A+GK+A LYVFNNG+ DV S LTAWEMKKPLMNG
Sbjct: 109 IDRSVVESFGAGGKTCILSRVYPSLAIGKNARLYVFNNGKADVKVSSLTAWEMKKPLMNG 288
Query: 374 A*N 382
A*N
Sbjct: 289 A*N 297
>gb|CF489729.1|CF489729 POL1_59_G05.b1_A002 Pollen Sorghum bicolor cDNA clone
POL1_59_G05_A002 3', mRNA sequence
Length = 561
Score = 107 bits (229), Expect(2) = 3e-029
Identities = 44/65 (67%), Positives = 52/65 (80%)
Frame = +2 / +2
Query: 176 ITLRSLIDRSXVESFGAGGKTCILSRVYPSIAVGKDAHLYVFNNGEXDVTXSGLTAWEMK 355
I LR+LID S VESFGAGG+TCILSRVYP A+G +AHL+VFN+GE DV + L AWEM+
Sbjct: 98 IALRTLIDHSVVESFGAGGRTCILSRVYPKKALGDNAHLFVFNHGEVDVKVAKLDAWEMR 277
Query: 356 KPLMN 370
P MN
Sbjct: 278 TPKMN 292
Score = 40.9 bits (83), Expect(2) = 3e-029
Identities = 14/28 (50%), Positives = 18/28 (64%)
Frame = +2 / +2
Query: 83 MCTDPTKXXLSPDLYKPTFXXFVDADIS 166
MC DPT L +Y+PTF FV+ DI+
Sbjct: 2 MCNDPTNSTLEAQVYRPTFASFVNHDIA 85
>gb|CW394783.1|CW394783 fsbb001f082i17k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f082i17, DNA
sequence
Length = 710
Score = 88.6 bits (187), Expect(3) = 9e-029
Identities = 38/54 (70%), Positives = 42/54 (77%)
Frame = +2 / -1
Query: 194 IDRSXVESFGAGGKTCILSRVYPSIAVGKDAHLYVFNNGEXDVTXSGLTAWEMK 355
ID S VESFGA GKTCILSRVYP+ AVG A LYVFNNGE DV + L A+EM+
Sbjct: 356 IDHSVVESFGAHGKTCILSRVYPTKAVGDKARLYVFNNGESDVKVTHLNAYEMR 195
Score = 46.4 bits (95), Expect(3) = 9e-029
Identities = 17/34 (50%), Positives = 23/34 (67%)
Frame = +2 / -2
Query: 65 GKPKVLMCTDPTKXXLSPDLYKPTFXXFVDADIS 166
GK VLMC DP+ + +LYKPTF FVD +++
Sbjct: 625 GKHVVLMCNDPSMSSHADNLYKPTFAGFVDVEVA 524
Score = 31.3 bits (62), Expect(3) = 9e-029
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = +1 / -1
Query: 4 GLRRPAGAXXXXLQGLQGRTRQ 69
G+RRP G LQG+QGR R+
Sbjct: 698 GVRRPQGTDRRVLQGVQGRRRR 633
>gb|CF483310.1|CF483310 POL1_21_H05.b1_A002 Pollen Sorghum bicolor cDNA clone
POL1_21_H05_A002 3', mRNA sequence
Length = 560
Score = 104 bits (221), Expect(2) = 1e-028
Identities = 43/65 (66%), Positives = 51/65 (78%)
Frame = +2 / +2
Query: 176 ITLRSLIDRSXVESFGAGGKTCILSRVYPSIAVGKDAHLYVFNNGEXDVTXSGLTAWEMK 355
I LR+LID S VESFGAGG+TCILSRVYP A+G +AHL+VFN+GE DV + L AWEM+
Sbjct: 104 IALRTLIDHSVVESFGAGGRTCILSRVYPKKALGDNAHLFVFNHGEVDVKVAKLDAWEMR 283
Query: 356 KPLMN 370
MN
Sbjct: 284 TSKMN 298
Score = 42.8 bits (87), Expect(2) = 1e-028
Identities = 15/30 (50%), Positives = 19/30 (63%)
Frame = +2 / +2
Query: 77 VLMCTDPTKXXLSPDLYKPTFXXFVDADIS 166
VLMC DPT +Y+PTF FV+ DI+
Sbjct: 2 VLMCNDPTNSTFEAQVYRPTFASFVNHDIA 91
>gb|CW107381.1|CW107381 104_477_11096552_148_34471_022 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11096552, DNA
sequence
Length = 560
Score = 125 bits (268), Expect = 4e-028
Identities = 53/66 (80%), Positives = 57/66 (86%)
Frame = +2 / -1
Query: 194 IDRSXVESFGAGGKTCILSRVYPSIAVGKDAHLYVFNNGEXDVTXSGLTAWEMKKPLMNG 373
IDRS VESFG G+TCILSRVYPSIA+GK+AHLYVFNNG+ DV S LTAWEMKKPLMNG
Sbjct: 395 IDRSVVESFGEKGRTCILSRVYPSIAIGKEAHLYVFNNGDVDVKVSSLTAWEMKKPLMNG 216
Query: 374 A*N*RE 391
A* RE
Sbjct: 215 A**KRE 198
Score = 104 bits (221), Expect = 1e-021
Identities = 48/61 (78%), Positives = 50/61 (81%)
Frame = -2 / +1
Query: 375 APFIXGFFISQAVRPXXVTSXSPLLKT*R*ASFPTAMDGYTRDRMHVLPPAPKLSTXDRS 196
APFI GFFIS AVR +TS SPLLKT*R*ASFP AMDG TRDRM VLP +PKLST DRS
Sbjct: 214 APFISGFFISHAVRLDTLTSTSPLLKT*R*ASFPMAMDG*TRDRMQVLPFSPKLSTTDRS 393
Query: 195 I 193
I
Sbjct: 394 I 396
>gb|CW300032.1|CW300032 104_783_11463432_148_36247_092 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11463432, DNA
sequence
Length = 631
Score = 125 bits (268), Expect = 4e-028
Identities = 53/66 (80%), Positives = 57/66 (86%)
Frame = +2 / +1
Query: 194 IDRSXVESFGAGGKTCILSRVYPSIAVGKDAHLYVFNNGEXDVTXSGLTAWEMKKPLMNG 373
IDRS VESFG G+TCILSRVYPSIA+GK+AHLYVFNNG+ DV S LTAWEMKKPLMNG
Sbjct: 52 IDRSVVESFGEKGRTCILSRVYPSIAIGKEAHLYVFNNGDVDVKVSSLTAWEMKKPLMNG 231
Query: 374 A*N*RE 391
A* RE
Sbjct: 232 A**KRE 249
Score = 104 bits (221), Expect = 1e-021
Identities = 48/61 (78%), Positives = 50/61 (81%)
Frame = -2 / -3
Query: 375 APFIXGFFISQAVRPXXVTSXSPLLKT*R*ASFPTAMDGYTRDRMHVLPPAPKLSTXDRS 196
APFI GFFIS AVR +TS SPLLKT*R*ASFP AMDG TRDRM VLP +PKLST DRS
Sbjct: 233 APFISGFFISHAVRLDTLTSTSPLLKT*R*ASFPMAMDG*TRDRMQVLPFSPKLSTTDRS 54
Query: 195 I 193
I
Sbjct: 53 I 51
>gb|CW400389.1|CW400389 fsbb001f090k19k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f090k19, DNA
sequence
Length = 753
Score = 124 bits (265), Expect = 9e-028
Identities = 51/63 (80%), Positives = 56/63 (88%)
Frame = +2 / -1
Query: 194 IDRSXVESFGAGGKTCILSRVYPSIAVGKDAHLYVFNNGEXDVTXSGLTAWEMKKPLMNG 373
IDRS VESFGAGGKTCILSRVYPS+A+G +A LYVFNNG+ DV S LTAWEMKKPLMNG
Sbjct: 627 IDRSVVESFGAGGKTCILSRVYPSLAIGNNARLYVFNNGKADVRVSRLTAWEMKKPLMNG 448
Query: 374 A*N 382
A*+
Sbjct: 447 A*S 439
>gb|CF485887.1|CF485887 POL1_34_G06.b1_A002 Pollen Sorghum bicolor cDNA clone
POL1_34_G06_A002 3', mRNA sequence
Length = 569
Score = 96.4 bits (204), Expect(2) = 2e-027
Identities = 42/60 (70%), Positives = 47/60 (78%)
Frame = +2 / +3
Query: 176 ITLRSLIDRSXVESFGAGGKTCILSRVYPSIAVGKDAHLYVFNNGEXDVTXSGLTAWEMK 355
I LR+LID S VESFGA GKTCILSRVYP+ AVG A LYVFNNGE DV + L A+EM+
Sbjct: 153 IPLRTLIDHSVVESFGAHGKTCILSRVYPTKAVGDKARLYVFNNGESDVKVTHLNAYEMR 332
Score = 46.4 bits (95), Expect(2) = 2e-027
Identities = 17/34 (50%), Positives = 23/34 (67%)
Frame = +2 / +3
Query: 65 GKPKVLMCTDPTKXXLSPDLYKPTFXXFVDADIS 166
GK VLMC DP+ + +LYKPTF FVD +++
Sbjct: 36 GKHVVLMCNDPSMSSHADNLYKPTFAGFVDVEVA 137
>gb|CW163224.1|CW163224 104_570_11151351_148_36450_052 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11151351, DNA
sequence
Length = 702
Score = 99.6 bits (211), Expect(2) = 3e-027
Identities = 40/59 (67%), Positives = 47/59 (79%)
Frame = +2 / -1
Query: 194 IDRSXVESFGAGGKTCILSRVYPSIAVGKDAHLYVFNNGEXDVTXSGLTAWEMKKPLMN 370
ID S VESFGAGG+TCILSRVYP A+G +AHL+VFN+GE DV + L AWEM+ P MN
Sbjct: 477 IDHSVVESFGAGGRTCILSRVYPKKALGDNAHLFVFNHGEVDVKVAKLDAWEMRTPKMN 301
Score = 42.8 bits (87), Expect(2) = 3e-027
Identities = 15/30 (50%), Positives = 19/30 (63%)
Frame = +2 / -2
Query: 77 VLMCTDPTKXXLSPDLYKPTFXXFVDADIS 166
VLMC DPT +Y+PTF FV+ DI+
Sbjct: 686 VLMCNDPTNSTFEAQVYRPTFASFVNHDIA 597
>gb|CW457046.1|CW457046 fsbb001f202l01k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f202l01, DNA
sequence
Length = 775
Score = 121 bits (259), Expect = 6e-027
Identities = 49/61 (80%), Positives = 52/61 (85%)
Frame = +2 / -2
Query: 194 IDRSXVESFGAGGKTCILSRVYPSIAVGKDAHLYVFNNGEXDVTXSGLTAWEMKKPLMNG 373
IDRS VESFGAGGKTCILSRVYPS+A+G AHLYVFNNG DV S L AWEMKKP+MNG
Sbjct: 612 IDRSVVESFGAGGKTCILSRVYPSLAIGNKAHLYVFNNGRADVKVSRLIAWEMKKPVMNG 433
Query: 374 A 376
A
Sbjct: 432 A 430
>gb|CW498974.1|CW498974 fsbb001f293i01k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f293i01, DNA
sequence
Length = 659
Score = 121 bits (259), Expect = 6e-027
Identities = 49/61 (80%), Positives = 52/61 (85%)
Frame = +2 / -2
Query: 194 IDRSXVESFGAGGKTCILSRVYPSIAVGKDAHLYVFNNGEXDVTXSGLTAWEMKKPLMNG 373
IDRS VESFGAGGKTCILSRVYPS+A+G AHLYVFNNG DV S L AWEMKKP+MNG
Sbjct: 526 IDRSVVESFGAGGKTCILSRVYPSLAIGNKAHLYVFNNGRADVKVSRLIAWEMKKPVMNG 347
Query: 374 A 376
A
Sbjct: 346 A 344
>gb|BG559635.1|BG559635 RHIZ2_71_F04.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 295
Score = 67.5 bits (141), Expect(3) = 2e-026
Identities = 25/29 (86%), Positives = 27/29 (93%)
Frame = +2 / +3
Query: 38 FFRVFRDGHGKPKVLMCTDPTKXXLSPDL 124
FFRVF+DG+GKPKVLMCTDPTK LSPDL
Sbjct: 3 FFRVFKDGYGKPKVLMCTDPTKSSLSPDL 89
Score = 59.3 bits (123), Expect(3) = 2e-026
Identities = 25/33 (75%), Positives = 28/33 (84%)
Frame = +2 / +1
Query: 176 ITLRSLIDRSXVESFGAGGKTCILSRVYPSIAV 274
+ L SLIDRS VESFG G+TCILSRVYPSIA+
Sbjct: 142 LLLESLIDRSVVESFGEKGRTCILSRVYPSIAM 240
Score = 27.6 bits (54), Expect(3) = 2e-026
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = +2 / +2
Query: 128 KPTFXXFVDADISXXXI 178
KPTF FVD DIS I
Sbjct: 92 KPTFAGFVDTDISSGKI 142
>gb|CF486860.1|CF486860 POL1_40_F03.b1_A002 Pollen Sorghum bicolor cDNA clone
POL1_40_F03_A002 3', mRNA sequence
Length = 476
Score = 107 bits (229), Expect(2) = 4e-024
Identities = 44/65 (67%), Positives = 52/65 (80%)
Frame = +2 / +2
Query: 176 ITLRSLIDRSXVESFGAGGKTCILSRVYPSIAVGKDAHLYVFNNGEXDVTXSGLTAWEMK 355
I LR+LID S VESFGAGG+TCILSRVYP A+G +AHL+VFN+GE DV + L AWEM+
Sbjct: 140 IALRTLIDHSVVESFGAGGRTCILSRVYPKKALGDNAHLFVFNHGEVDVKVAKLDAWEMR 319
Query: 356 KPLMN 370
P MN
Sbjct: 320 TPKMN 334
Score = 23.5 bits (45), Expect(2) = 4e-024
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = +2 / +1
Query: 77 VLMCTDPTK 103
VLMC DPTK
Sbjct: 37 VLMCNDPTK 63
>gb|CW065110.1|CW065110 104_311_10522954_115_30121 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10522954, DNA
sequence
Length = 583
Score = 110 bits (234), Expect = 2e-023
Identities = 44/53 (83%), Positives = 48/53 (90%)
Frame = +2 / -1
Query: 224 AGGKTCILSRVYPSIAVGKDAHLYVFNNGEXDVTXSGLTAWEMKKPLMNGA*N 382
AGGKTCILSRVYPS+A+GK+A LYVFNNG+ DV S LTAWEMKKPLMNGA*N
Sbjct: 583 AGGKTCILSRVYPSLAIGKNARLYVFNNGKADVKVSSLTAWEMKKPLMNGA*N 425
>gb|CD220266.1|CD220266 CCC1_66_C08.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_66_C08_A007 3', mRNA sequence
Length = 662
Score = 54.2 bits (112), Expect(4) = 2e-023
Identities = 21/33 (63%), Positives = 26/33 (78%)
Frame = +2 / +1
Query: 176 ITLRSLIDRSXVESFGAGGKTCILSRVYPSIAV 274
I+LR+LID S +ESFG GG+TCI +RVYP V
Sbjct: 268 ISLRTLIDHSVIESFGGGGRTCITARVYPEHVV 366
Score = 41.8 bits (85), Expect(4) = 2e-023
Identities = 16/35 (45%), Positives = 21/35 (60%)
Frame = +2 / +1
Query: 266 IAVGKDAHLYVFNNGEXDVTXSGLTAWEMKKPLMN 370
+ G +HLY+FNNG VT S L AWE+ +N
Sbjct: 361 VVAGGSSHLYLFNNGAHPVTVSKLEAWELGTASVN 465
Score = 38.6 bits (78), Expect(4) = 2e-023
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = +2 / +1
Query: 65 GKPKVLMCTDPTKXXLSPDLYKPTFXXFVDADI 163
G KVLMC D T+ ++KP + FVD D+
Sbjct: 154 GTYKVLMCADLTRSSTKEGVHKPVYAGFVDVDV 252
Score = 29.0 bits (57), Expect(4) = 2e-023
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = +2 / +1
Query: 5 ASEDLQERXXXFFRVFRDG 61
AS D++E+ FFRVFR G
Sbjct: 97 ASGDMREQTTVFFRVFRHG 153
>gb|CX615454.1|CX615454 GABR1_20_F03.b1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_20_F03_A002 3', mRNA sequence
Length = 729
Score = 54.2 bits (112), Expect(4) = 2e-023
Identities = 21/33 (63%), Positives = 26/33 (78%)
Frame = +2 / +1
Query: 176 ITLRSLIDRSXVESFGAGGKTCILSRVYPSIAV 274
I+LR+LID S +ESFG GG+TCI +RVYP V
Sbjct: 310 ISLRTLIDHSVIESFGGGGRTCITARVYPEHVV 408
Score = 41.8 bits (85), Expect(4) = 2e-023
Identities = 16/35 (45%), Positives = 21/35 (60%)
Frame = +2 / +1
Query: 266 IAVGKDAHLYVFNNGEXDVTXSGLTAWEMKKPLMN 370
+ G +HLY+FNNG VT S L AWE+ +N
Sbjct: 403 VVAGGSSHLYLFNNGAHPVTVSKLEAWELGTASVN 507
Score = 38.6 bits (78), Expect(4) = 2e-023
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = +2 / +1
Query: 65 GKPKVLMCTDPTKXXLSPDLYKPTFXXFVDADI 163
G KVLMC D T+ ++KP + FVD D+
Sbjct: 196 GTYKVLMCADLTRSSTKEGVHKPVYAGFVDVDV 294
Score = 29.0 bits (57), Expect(4) = 2e-023
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = +2 / +1
Query: 5 ASEDLQERXXXFFRVFRDG 61
AS D++E+ FFRVFR G
Sbjct: 139 ASGDMREQTTVFFRVFRHG 195
>gb|CF482134.1|CF482134 POL1_5_C01.b1_A002 Pollen Sorghum bicolor cDNA clone
POL1_5_C01_A002 3', mRNA sequence
Length = 558
Score = 107 bits (229), Expect(2) = 3e-023
Identities = 44/65 (67%), Positives = 52/65 (80%)
Frame = +2 / +3
Query: 176 ITLRSLIDRSXVESFGAGGKTCILSRVYPSIAVGKDAHLYVFNNGEXDVTXSGLTAWEMK 355
I LR+LID S VESFGAGG+TCILSRVYP A+G +AHL+VFN+GE DV + L AWEM+
Sbjct: 105 IALRTLIDHSVVESFGAGGRTCILSRVYPKKALGDNAHLFVFNHGEVDVKVARLDAWEMR 284
Query: 356 KPLMN 370
P MN
Sbjct: 285 TPKMN 299
Score = 21.7 bits (41), Expect(2) = 3e-023
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = +2 / +2
Query: 77 VLMCTDPTK 103
VLMC DPT+
Sbjct: 2 VLMCNDPTQ 28
>gb|CX615728.1|CX615728 GABR1_22_F10.b1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_22_F10_A002 3', mRNA sequence
Length = 758
Score = 77.6 bits (163), Expect(3) = 6e-023
Identities = 33/65 (50%), Positives = 42/65 (64%)
Frame = +2 / +3
Query: 176 ITLRSLIDRSXVESFGAGGKTCILSRVYPSIAVGKDAHLYVFNNGEXDVTXSGLTAWEMK 355
I LR+LID S +ESFGA G+ CI +RVYP A ++HL+VFNNG V L AWE+
Sbjct: 453 IKLRTLIDHSMLESFGAEGRICITARVYPEHAETSNSHLFVFNNGTGKVEVPKLEAWELA 632
Query: 356 KPLMN 370
+N
Sbjct: 633 AATVN 647
Score = 40.5 bits (82), Expect(3) = 6e-023
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = +2 / +3
Query: 65 GKPKVLMCTDPTKXXLSPDLYKPTFXXFVDADI 163
G+ ++LMCTD T+ +YKP + FVD D+
Sbjct: 339 GRYRLLMCTDLTRSTTRAGVYKPPYGGFVDVDV 437
Score = 27.2 bits (53), Expect(3) = 6e-023
Identities = 11/17 (64%), Positives = 12/17 (70%)
Frame = +2 / +3
Query: 5 ASEDLQERXXXFFRVFR 55
AS DL+E FFRVFR
Sbjct: 282 ASGDLREHTTVFFRVFR 332
>gb|CD425062.1|CD425062 SA1_10_D06.b1_A002 Salicylic acid-treated seedlings Sorghum bicolor
cDNA clone SA1_10_D06_A002 3', mRNA sequence
Length = 711
Score = 77.6 bits (163), Expect(3) = 6e-023
Identities = 33/65 (50%), Positives = 42/65 (64%)
Frame = +2 / +1
Query: 176 ITLRSLIDRSXVESFGAGGKTCILSRVYPSIAVGKDAHLYVFNNGEXDVTXSGLTAWEMK 355
I LR+LID S +ESFGA G+ CI +RVYP A ++HL+VFNNG V L AWE+
Sbjct: 322 IKLRTLIDHSMLESFGAEGRICITARVYPEHAETSNSHLFVFNNGTGKVEVPKLEAWELA 501
Query: 356 KPLMN 370
+N
Sbjct: 502 AATVN 516
Score = 40.5 bits (82), Expect(3) = 6e-023
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = +2 / +1
Query: 65 GKPKVLMCTDPTKXXLSPDLYKPTFXXFVDADI 163
G+ ++LMCTD T+ +YKP + FVD D+
Sbjct: 208 GRYRLLMCTDLTRSTTRAGVYKPPYGGFVDVDV 306
Score = 27.2 bits (53), Expect(3) = 6e-023
Identities = 11/17 (64%), Positives = 12/17 (70%)
Frame = +2 / +1
Query: 5 ASEDLQERXXXFFRVFR 55
AS DL+E FFRVFR
Sbjct: 151 ASGDLREHTTVFFRVFR 201
>gb|CN132764.1|CN132764 OX1_8_C05.b1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_8_C05_A002 3', mRNA sequence
Length = 708
Score = 77.6 bits (163), Expect(3) = 6e-023
Identities = 33/65 (50%), Positives = 42/65 (64%)
Frame = +2 / +1
Query: 176 ITLRSLIDRSXVESFGAGGKTCILSRVYPSIAVGKDAHLYVFNNGEXDVTXSGLTAWEMK 355
I LR+LID S +ESFGA G+ CI +RVYP A ++HL+VFNNG V L AWE+
Sbjct: 325 IKLRTLIDHSMLESFGAEGRICITARVYPEHAETSNSHLFVFNNGTGKVEVPKLEAWELA 504
Query: 356 KPLMN 370
+N
Sbjct: 505 AATVN 519
Score = 40.5 bits (82), Expect(3) = 6e-023
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = +2 / +1
Query: 65 GKPKVLMCTDPTKXXLSPDLYKPTFXXFVDADI 163
G+ ++LMCTD T+ +YKP + FVD D+
Sbjct: 211 GRYRLLMCTDLTRSTTRAGVYKPPYGGFVDVDV 309
Score = 27.2 bits (53), Expect(3) = 6e-023
Identities = 11/17 (64%), Positives = 12/17 (70%)
Frame = +2 / +1
Query: 5 ASEDLQERXXXFFRVFR 55
AS DL+E FFRVFR
Sbjct: 154 ASGDLREHTTVFFRVFR 204
>gb|CX611701.1|CX611701 ANR1_26_E07.b1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_26_E07_A002 3', mRNA sequence
Length = 704
Score = 77.6 bits (163), Expect(3) = 6e-023
Identities = 33/65 (50%), Positives = 42/65 (64%)
Frame = +2 / +2
Query: 176 ITLRSLIDRSXVESFGAGGKTCILSRVYPSIAVGKDAHLYVFNNGEXDVTXSGLTAWEMK 355
I LR+LID S +ESFGA G+ CI +RVYP A ++HL+VFNNG V L AWE+
Sbjct: 329 IKLRTLIDHSMLESFGAEGRICITARVYPEHAETSNSHLFVFNNGTGKVEVPKLEAWELA 508
Query: 356 KPLMN 370
+N
Sbjct: 509 AATVN 523
Score = 40.5 bits (82), Expect(3) = 6e-023
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = +2 / +2
Query: 65 GKPKVLMCTDPTKXXLSPDLYKPTFXXFVDADI 163
G+ ++LMCTD T+ +YKP + FVD D+
Sbjct: 215 GRYRLLMCTDLTRSTTRAGVYKPPYGGFVDVDV 313
Score = 27.2 bits (53), Expect(3) = 6e-023
Identities = 11/17 (64%), Positives = 12/17 (70%)
Frame = +2 / +2
Query: 5 ASEDLQERXXXFFRVFR 55
AS DL+E FFRVFR
Sbjct: 158 ASGDLREHTTVFFRVFR 208
>gb|CF480470.1|CF480470 POL1_66_A09.b1_A002 Pollen Sorghum bicolor cDNA clone
POL1_66_A09_A002 3', mRNA sequence
Length = 463
Score = 107 bits (229), Expect = 8e-023
Identities = 44/65 (67%), Positives = 52/65 (80%)
Frame = +2 / +2
Query: 176 ITLRSLIDRSXVESFGAGGKTCILSRVYPSIAVGKDAHLYVFNNGEXDVTXSGLTAWEMK 355
I LR+LID S VESFGAGG+TCILSRVYP A+G +AHL+VFN+GE DV + L AWEM+
Sbjct: 2 IALRTLIDHSVVESFGAGGRTCILSRVYPKKALGDNAHLFVFNHGEVDVKVAKLDAWEMR 181
Query: 356 KPLMN 370
P MN
Sbjct: 182 TPKMN 196
>gb|CF480523.1|CF480523 POL1_66_G02.b1_A002 Pollen Sorghum bicolor cDNA clone
POL1_66_G02_A002 3', mRNA sequence
Length = 491
Score = 107 bits (229), Expect = 8e-023
Identities = 44/65 (67%), Positives = 52/65 (80%)
Frame = +2 / +3
Query: 176 ITLRSLIDRSXVESFGAGGKTCILSRVYPSIAVGKDAHLYVFNNGEXDVTXSGLTAWEMK 355
I LR+LID S VESFGAGG+TCILSRVYP A+G +AHL+VFN+GE DV + L AWEM+
Sbjct: 30 IALRTLIDHSVVESFGAGGRTCILSRVYPKKALGDNAHLFVFNHGEVDVKVAKLDAWEMR 209
Query: 356 KPLMN 370
P MN
Sbjct: 210 TPKMN 224
>gb|CF480645.1|CF480645 POL1_67_B05.b1_A002 Pollen Sorghum bicolor cDNA clone
POL1_67_B05_A002 3', mRNA sequence
Length = 469
Score = 107 bits (229), Expect = 8e-023
Identities = 44/65 (67%), Positives = 52/65 (80%)
Frame = +2 / +2
Query: 176 ITLRSLIDRSXVESFGAGGKTCILSRVYPSIAVGKDAHLYVFNNGEXDVTXSGLTAWEMK 355
I LR+LID S VESFGAGG+TCILSRVYP A+G +AHL+VFN+GE DV + L AWEM+
Sbjct: 8 IALRTLIDHSVVESFGAGGRTCILSRVYPKKALGDNAHLFVFNHGEVDVKVAKLDAWEMR 187
Query: 356 KPLMN 370
P MN
Sbjct: 188 TPKMN 202
>gb|CF481133.1|CF481133 POL1_70_E03.b1_A002 Pollen Sorghum bicolor cDNA clone
POL1_70_E03_A002 3', mRNA sequence
Length = 452
Score = 107 bits (229), Expect = 8e-023
Identities = 44/65 (67%), Positives = 52/65 (80%)
Frame = +2 / +1
Query: 176 ITLRSLIDRSXVESFGAGGKTCILSRVYPSIAVGKDAHLYVFNNGEXDVTXSGLTAWEMK 355
I LR+LID S VESFGAGG+TCILSRVYP A+G +AHL+VFN+GE DV + L AWEM+
Sbjct: 7 IALRTLIDHSVVESFGAGGRTCILSRVYPKKALGDNAHLFVFNHGEVDVKVAKLDAWEMR 186
Query: 356 KPLMN 370
P MN
Sbjct: 187 TPKMN 201
>gb|CF481471.1|CF481471 POL1_72_E04.b1_A002 Pollen Sorghum bicolor cDNA clone
POL1_72_E04_A002 3', mRNA sequence
Length = 453
Score = 107 bits (229), Expect = 8e-023
Identities = 44/65 (67%), Positives = 52/65 (80%)
Frame = +2 / +2
Query: 176 ITLRSLIDRSXVESFGAGGKTCILSRVYPSIAVGKDAHLYVFNNGEXDVTXSGLTAWEMK 355
I LR+LID S VESFGAGG+TCILSRVYP A+G +AHL+VFN+GE DV + L AWEM+
Sbjct: 8 IALRTLIDHSVVESFGAGGRTCILSRVYPKKALGDNAHLFVFNHGEVDVKVAKLDAWEMR 187
Query: 356 KPLMN 370
P MN
Sbjct: 188 TPKMN 202
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 367,422,003
Number of Sequences: 832831
Number of extensions: 3740345
Number of successful extensions: 94471
Number of sequences better than 1.0e-020: 61
length of database: 163,786,556
effective HSP length: 52
effective length of database: 120,479,344
effective search space used: 12168413744
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)