TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= QBB9c12.pg.2.1
(545 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CN148075.1|CN148075 WOUND1_54_C02.b1_A002 Wounded leaves... 368 e-101
gb|CW432748.1|CW432748 fsbb001f147k02f0 Sorghum methylation... 244 4e-097
gb|CD424348.1|CD424348 SA1_5_E09.b1_A002 Salicylic acid-tre... 325 6e-088
gb|CW150106.1|CW150106 104_549_11142853_116_36303_057 Sorgh... 284 8e-076
gb|CW150107.1|CW150107 104_549_11142853_148_36304_057 Sorgh... 258 6e-068
gb|CD224613.1|CD224613 CCC1_35_F08.b1_A007 Callus culture/c... 171 5e-064
gb|CB928358.1|CB928358 ABA1_15_H11.b1_A012 Abscisic acid-tr... 240 1e-062
gb|CW404739.1|CW404739 fsbb001f097a06k0 Sorghum methylation... 238 7e-062
gb|CN144834.1|CN144834 WOUND1_25_E11.b2_A002 Wounded leaves... 238 7e-062
gb|AW677595.1|AW677595 DG1_8_E07.g1_A002 Dark Grown 1 (DG1)... 228 7e-059
gb|CD227847.1|CD227847 CCC1_56_A04.b1_A007 Callus culture/c... 225 5e-058
gb|CB928778.1|CB928778 ABA1_24_C06.b1_A012 Abscisic acid-tr... 222 3e-057
gb|CW412590.1|CW412590 fsbb001f108e18k0 Sorghum methylation... 204 1e-056
gb|CW496055.1|CW496055 fsbb001f288b11k0 Sorghum methylation... 188 1e-056
gb|BZ340250.1|BZ340250 ic37f08.b1 WGS-SbicolorF (JM107 adap... 137 1e-055
gb|CD223127.1|CD223127 CCC1_26_D11.b1_A007 Callus culture/c... 204 2e-053
gb|CW472599.1|CW472599 fsbb001f227j19k0 Sorghum methylation... 203 3e-051
gb|CB926451.1|CB926451 ABA1_9_A08.b1_A012 Abscisic acid-tre... 199 2e-050
gb|CW785094.1|CW785094 SP__Ba0007P10.f SP__Ba Sorghum propi... 195 6e-049
gb|CW208733.1|CW208733 104_638_11188843_148_36982_074 Sorgh... 161 1e-048
gb|CW313572.1|CW313572 104_803_11471355_116_35786_002 Sorgh... 194 1e-048
gb|CD212039.1|CD212039 HS1_68_G01.b1_A012 Heat-shocked seed... 193 2e-048
gb|BE599295.1|BE599295 PI1_87_G04.g1_A002 Pathogen induced ... 137 4e-048
gb|CW239896.1|CW239896 104_698_11217909_116_37504_089 Sorgh... 192 5e-048
gb|CW500380.1|CW500380 fsbb001f295k23k0 Sorghum methylation... 124 2e-047
gb|CW395484.1|CW395484 fsbb001f083i14k0 Sorghum methylation... 166 3e-045
gb|BG052249.1|BG052249 RHIZ2_12_A12.g1_A003 Rhizome2 (RHIZ2... 176 4e-043
gb|CW239897.1|CW239897 104_698_11217909_148_37505_089 Sorgh... 141 8e-043
gb|CW232538.1|CW232538 104_685_11212872_148_37363_092 Sorgh... 133 1e-038
gb|CL189680.1|CL189680 104_407_10905541_116_32481_061 Sorgh... 124 2e-037
gb|CW313573.1|CW313573 104_803_11471355_148_35790_002 Sorgh... 120 2e-036
gb|BI643608.1|BI643608 DG1_91_A08.b1_A002 Dark Grown 1 (DG1... 151 7e-036
gb|CW404738.1|CW404738 fsbb001f097a06f0 Sorghum methylation... 149 3e-035
gb|CW269433.1|CW269433 104_740_11401840_148_35315_054 Sorgh... 114 9e-035
gb|CL187366.1|CL187366 104_402_10900827_116_32436_002 Sorgh... 108 1e-034
gb|BE126076.1|BE126076 DG1_65_E03.g1_A002 Dark Grown 1 (DG1... 138 1e-034
gb|BE362888.2|BE362888 DG1_90_B11.g1_A002 Dark Grown 1 (DG1... 138 1e-034
gb|CX616980.1|CX616980 GABR1_31_B05.b1_A002 GA- or brassino... 138 1e-034
gb|CW312128.1|CW312128 104_801_11470592_148_36283_018 Sorgh... 114 2e-034
gb|CW072473.1|CW072473 104_325_10592285_116_30541 Sorghum m... 113 4e-034
gb|CW311011.1|CW311011 104_800_11470011_116_35753_010 Sorgh... 132 4e-034
gb|CW449893.1|CW449893 fsbb001f188e03k0 Sorghum methylation... 112 2e-033
gb|CW071601.1|CW071601 104_323_10591591_114_30471 Sorghum m... 128 2e-033
gb|CW365974.1|CW365974 fsbb001f038m02k0 Sorghum methylation... 128 2e-033
gb|CW312127.1|CW312127 104_801_11470592_116_36284_018 Sorgh... 114 4e-033
gb|AF503433.1| Sorghum bicolor BAC 170F8, complete sequence 115 2e-032
gb|CW412589.1|CW412589 fsbb001f108e18f0 Sorghum methylation... 97 2e-032
gb|CW461238.1|CW461238 fsbb001f208m21f0 Sorghum methylation... 118 2e-030
gb|CX609006.1|CX609006 ANR1_10_C05.b1_A002 Anaerobic roots ... 128 7e-030
gb|CW466433.1|CW466433 fsbb001f217k17k0 Sorghum methylation... 128 7e-030
gb|CW486745.1|CW486745 fsbb001f252d07f0 Sorghum methylation... 115 9e-030
gb|CN139110.1|CN139110 OX1_16_B11.b1_A002 Oxidatively-stres... 126 3e-029
gb|CW494886.1|CW494886 fsbb001f286g11f0 Sorghum methylation... 93 6e-029
gb|CW397587.1|CW397587 fsbb001f086k03f0 Sorghum methylation... 93 6e-029
gb|CW167654.1|CW167654 104_577_11153717_116_36491_031 Sorgh... 128 7e-029
gb|CN130398.1|CN130398 RHOH1_41_F02.b1_A002 Acid- and alkal... 127 1e-028
gb|CN141229.1|CN141229 OX1_50_D06.b1_A002 Oxidatively-stres... 127 1e-028
gb|CX618330.1|CX618330 GABR1_39_A08.b1_A002 GA- or brassino... 95 1e-028
gb|CW241136.1|CW241136 104_700_11218601_116_37545_077 Sorgh... 127 2e-028
gb|BZ628007.1|BZ628007 ih57b10.b1 WGS-SbicolorF (DH5a methy... 94 3e-028
gb|CW115454.1|CW115454 104_490_11106569_116_34592_069 Sorgh... 111 3e-028
gb|CW200287.1|CW200287 104_625_11183983_148_36862_020 Sorgh... 95 5e-028
gb|CW232537.1|CW232537 104_685_11212872_116_37364_092 Sorgh... 122 8e-028
gb|BG241163.1|BG241163 OV1_39_A04.b1_A002 Ovary 1 (OV1) Sor... 124 9e-028
gb|CL190026.1|CL190026 104_407_10905785_116_32481_067 Sorgh... 116 1e-027
gb|CW159792.1|CW159792 104_566_11149541_116_36421_029 Sorgh... 121 1e-026
gb|CL185025.1|CL185025 104_398_10899248_114_32369_020 Sorgh... 82 2e-026
gb|CW107875.1|CW107875 104_478_11096833_116_34485_009 Sorgh... 118 6e-026
gb|CW051897.1|CW051897 104_292_10515394_115_30287 Sorghum m... 110 7e-026
gb|CW234266.1|CW234266 104_687_11213889_116_37381_033 Sorgh... 75 7e-026
gb|CW051896.1|CW051896 104_292_10515394_115_30190 Sorghum m... 110 7e-026
gb|CW289046.1|CW289046 104_767_11412270_116_35544_019 Sorgh... 118 8e-026
gb|CL175428.1|CL175428 104_381_10892447_116_31765_047 Sorgh... 96 1e-025
gb|CW334674.1|CW334674 104_833_11482623_148_36071_060 Sorgh... 96 1e-025
gb|CW424419.1|CW424419 fsbb001f134l24f0 Sorghum methylation... 117 1e-025
gb|CX610524.1|CX610524 ANR1_19_F04.b1_A002 Anaerobic roots ... 108 1e-025
gb|CW186267.1|CW186267 104_604_11166477_148_36710_093 Sorgh... 117 2e-025
gb|BG465262.1|BG465262 EM1_74_A07.g1_A002 Embryo 1 (EM1) So... 117 2e-025
gb|CD203746.1|CD203746 HS1_1_B01.g1_A012 Heat-shocked seedl... 117 2e-025
gb|CX609512.1|CX609512 ANR1_13_D09.b1_A002 Anaerobic roots ... 107 2e-025
gb|CX618036.1|CX618036 GABR1_37_G11.b1_A002 GA- or brassino... 107 2e-025
gb|CN129257.1|CN129257 RHOH1_34_H10.b3_A002 Acid- and alkal... 107 2e-025
gb|CN149017.1|CN149017 WOUND1_60_F03.b1_A002 Wounded leaves... 107 2e-025
gb|CX618359.1|CX618359 GABR1_39_D05.b1_A002 GA- or brassino... 107 2e-025
gb|CW239882.1|CW239882 104_698_11217900_116_37520_042 Sorgh... 116 2e-025
gb|CN137262.1|CN137262 OX1_56_E07.b1_A002 Oxidatively-stres... 107 2e-025
gb|CW064664.1|CW064664 104_311_10522696_115_30121 Sorghum m... 102 4e-025
gb|CW408966.1|CW408966 fsbb001f103b09f0 Sorghum methylation... 83 4e-025
gb|CW487792.1|CW487792 fsbb001f253n06k0 Sorghum methylation... 107 6e-025
gb|CW408694.1|CW408694 fsbb001f102l04f0 Sorghum methylation... 103 6e-025
gb|CW105968.1|CW105968 104_475_11013160_116_34457_058 Sorgh... 115 7e-025
gb|CW363376.1|CW363376 fsbb001f034p04k0 Sorghum methylation... 84 8e-025
gb|CX606664.1|CX606664 ANR1_4_G03.b1_A002 Anaerobic roots S... 107 8e-025
gb|CW307346.1|CW307346 104_795_11468092_116_35729_010 Sorgh... 103 8e-025
gb|CX614480.1|CX614480 GABR1_14_G09.b1_A002 GA- or brassino... 107 2e-024
gb|CW233504.1|CW233504 104_686_11213464_148_37375_052 Sorgh... 107 2e-024
gb|CN143621.1|CN143621 WOUND1_17_H10.b1_A002 Wounded leaves... 96 4e-024
gb|CW289492.1|CW289492 104_768_11412507_116_35547_010 Sorgh... 100 4e-024
gb|BE364954.1|BE364954 PI1_22_F04.b1_A002 Pathogen induced ... 96 4e-024
gb|BZ691445.1|BZ691445 SP__Ba0008J08.f SP__Ba Sorghum propi... 112 5e-024
gb|CL164885.1|CL164885 104_359_10808216_116_31817_200 Sorgh... 112 5e-024
gb|CW378268.1|CW378268 fsbb001f056p09k0 Sorghum methylation... 112 5e-024
gb|CW391999.1|CW391999 fsbb001f078g16k0 Sorghum methylation... 112 5e-024
gb|CW785134.1|CW785134 SP__Ba0008J08.f SP__Ba Sorghum propi... 112 5e-024
gb|BE597326.1|BE597326 PI1_72_B01.g1_A002 Pathogen induced ... 112 5e-024
gb|CD236389.1|CD236389 SS1_34_G08.b1_A012 Salt-stressed see... 96 5e-024
gb|BE356265.1|BE356265 DG1_123_A04.g1_A002 Dark Grown 1 (DG... 104 5e-024
gb|CN130059.1|CN130059 RHOH1_39_B11.b1_A002 Acid- and alkal... 111 7e-024
gb|CW334673.1|CW334673 104_833_11482623_116_36070_060 Sorgh... 95 7e-024
gb|CW087763.1|CW087763 104_432_10947820_114_32553_008 Sorgh... 101 1e-023
gb|CW087764.1|CW087764 104_432_10947820_116_32557_008 Sorgh... 101 1e-023
gb|BE358121.1|BE358121 DG1_24_C10.g1_A002 Dark Grown 1 (DG1... 95 1e-023
gb|BE600358.1|BE600358 PI1_95_D08.g1_A002 Pathogen induced ... 95 1e-023
gb|CX613268.1|CX613268 GABR1_7_E10.b1_A002 GA- or brassinol... 103 1e-023
gb|CW097799.1|CW097799 104_464_11002660_148_34365_014 Sorgh... 103 1e-023
gb|CX619210.1|CX619210 GABR1_44_D05.b1_A002 GA- or brassino... 95 1e-023
gb|BE359082.1|BE359082 DG1_38_F04.g1_A002 Dark Grown 1 (DG1... 95 1e-023
gb|CW180651.1|CW180651 104_595_11163067_116_36641_076 Sorgh... 111 1e-023
gb|CW405793.1|CW405793 fsbb001f098i04k0 Sorghum methylation... 102 1e-023
gb|CW346601.1|CW346601 fsbb001f006d02f0 Sorghum methylation... 102 2e-023
gb|CW091182.1|CW091182 104_453_10998407_114_33028_096 Sorgh... 102 2e-023
gb|CW091183.1|CW091183 104_453_10998407_116_33032_096 Sorgh... 102 2e-023
gb|CB926468.1|CB926468 ABA1_9_A12.b1_A012 Abscisic acid-tre... 110 2e-023
gb|CW467620.1|CW467620 fsbb001f219g07f0 Sorghum methylation... 103 2e-023
gb|CW477959.1|CW477959 fsbb001f235j04f0 Sorghum methylation... 102 2e-023
gb|BG411388.1|BG411388 EM1_57_E10.g1_A002 Embryo 1 (EM1) So... 109 3e-023
gb|CW028597.1|CW028597 104_255_10499187_116_30393 Sorghum m... 105 5e-023
gb|CW224946.1|CW224946 104_662_11204091_116_37203_010 Sorgh... 108 6e-023
gb|CB924782.1|CB924782 ABA1_28_A10.b1_A012 Abscisic acid-tr... 108 6e-023
gb|CB925757.1|CB925757 ABA1_23_D07.b1_A012 Abscisic acid-tr... 108 6e-023
gb|CB926025.1|CB926025 ABA1_31_C05.b1_A012 Abscisic acid-tr... 108 6e-023
gb|CB927906.1|CB927906 ABA1_35_H12.b1_A012 Abscisic acid-tr... 108 6e-023
gb|CB928174.1|CB928174 ABA1_37_G08.b1_A012 Abscisic acid-tr... 108 6e-023
gb|CB928928.1|CB928928 ABA1_38_H04.b1_A012 Abscisic acid-tr... 108 6e-023
gb|CD222115.1|CD222115 CCC1_2_B08.b1_A007 Callus culture/ce... 108 6e-023
gb|CL190425.1|CL190425 104_408_10906074_116_32504_071 Sorgh... 82 6e-023
gb|BE596599.1|BE596599 PI1_58_B10.g1_A002 Pathogen induced ... 108 9e-023
gb|CW298408.1|CW298408 104_781_11462563_116_35658_080 Sorgh... 107 1e-022
gb|CW343485.1|CW343485 104_845_11487446_148_36187_051 Sorgh... 107 1e-022
gb|CW392865.1|CW392865 fsbb001f079k21k0 Sorghum methylation... 107 1e-022
gb|CD223441.1|CD223441 CCC1_28_C05.b1_A007 Callus culture/c... 107 1e-022
gb|CD428798.1|CD428798 ETH1_36_E07.b1_A002 Ethylene-treated... 107 1e-022
gb|CX612253.1|CX612253 GABR1_1_H09.b1_A002 GA- or brassinol... 107 1e-022
gb|CX619180.1|CX619180 GABR1_44_A07.b1_A002 GA- or brassino... 107 1e-022
gb|CN145338.1|CN145338 WOUND1_28_G04.b2_A002 Wounded leaves... 96 1e-022
gb|CW355398.1|CW355398 fsbb001f020a05k0 Sorghum methylation... 100 1e-022
gb|CX606798.1|CX606798 ANR1_5_B09.b1_A002 Anaerobic roots S... 100 1e-022
gb|CW249524.1|CW249524 104_711_11222896_148_35046_058 Sorgh... 102 1e-022
gb|CW217915.1|CW217915 104_651_11195911_148_37457_026 Sorgh... 100 1e-022
gb|CW277522.1|CW277522 104_751_11406073_148_35415_005 Sorgh... 107 2e-022
gb|CW381313.1|CW381313 fsbb001f062k12k0 Sorghum methylation... 94 2e-022
gb|CW351772.1|CW351772 fsbb001f013k19k0 Sorghum methylation... 94 2e-022
gb|CL188255.1|CL188255 104_404_10901465_116_32448_071 Sorgh... 103 2e-022
gb|CW427183.1|CW427183 fsbb001f139a21f0 Sorghum methylation... 96 2e-022
gb|CX614470.1|CX614470 GABR1_14_F09.b1_A002 GA- or brassino... 100 2e-022
gb|BE359974.1|BE359974 DG1_60_C01.g2_A002 Dark Grown 1 (DG1... 95 2e-022
gb|CW437239.1|CW437239 fsbb001f154e05f0 Sorghum methylation... 100 3e-022
gb|CW273802.1|CW273802 104_746_11404095_116_35362_056 Sorgh... 103 3e-022
gb|CW203946.1|CW203946 104_631_11186281_148_36907_003 Sorgh... 98 3e-022
gb|AW922352.1|AW922352 DG1_18_B03.g1_A002 Dark Grown 1 (DG1... 106 3e-022
gb|CW041558.1|CW041558 104_275_10506614_115_30285 Sorghum m... 94 4e-022
gb|CW090792.1|CW090792 104_436_10949475_116_32608_002 Sorgh... 97 4e-022
gb|CW193214.1|CW193214 104_616_11179448_116_36780_032 Sorgh... 92 6e-022
gb|CW460141.1|CW460141 fsbb001f207d15f0 Sorghum methylation... 105 6e-022
gb|CB928773.1|CB928773 ABA1_24_A12.b1_A012 Abscisic acid-tr... 105 6e-022
gb|CF427041.1|CF427041 PH1_3_B07.b1_A002 Phosphorous-defici... 105 6e-022
gb|CW494887.1|CW494887 fsbb001f286g11k0 Sorghum methylation... 89 8e-022
gb|CW289493.1|CW289493 104_768_11412507_148_35551_010 Sorgh... 92 8e-022
gb|CW439050.1|CW439050 fsbb001f156p22f0 Sorghum methylation... 104 1e-021
gb|CW049083.1|CW049083 104_288_10513818_115_30199 Sorghum m... 96 4e-021
gb|CW408967.1|CW408967 fsbb001f103b09k0 Sorghum methylation... 74 4e-021
gb|CW253228.1|CW253228 104_716_11224968_148_35099_084 Sorgh... 97 4e-021
gb|CN138029.1|CN138029 OX1_61_F11.b1_A002 Oxidatively-stres... 97 5e-021
gb|CW049014.1|CW049014 104_288_10513772_114_30200 Sorghum m... 95 5e-021
gb|CW234267.1|CW234267 104_687_11213889_148_37382_033 Sorgh... 78 5e-021
gb|CL147747.1|CL147747 104_327_10592607_116_31781_115 Sorgh... 102 5e-021
gb|CF433443.1|CF433443 NIT1_27_C07.b1_A002 Nitrogen-deficie... 102 5e-021
gb|BE364586.2|BE364586 PI1_15_G08.g1_A002 Pathogen induced ... 101 7e-021
gb|CW231546.1|CW231546 104_680_11211179_116_37341_034 Sorgh... 85 9e-021
gb|CW493408.1|CW493408 fsbb001f284c16f0 Sorghum methylation... 84 9e-021
gb|CW043822.1|CW043822 104_279_10508598_114_30276 Sorghum m... 85 9e-021
gb|CW056988.1|CW056988 104_298_10517976_115_30157 Sorghum m... 99 9e-021
gb|AW923519.1|AW923519 DG1_52_C12.g1_A002 Dark Grown 1 (DG1... 101 1e-020
>gb|CN148075.1|CN148075 WOUND1_54_C02.b1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_54_C02_A002 3', mRNA sequence
Length = 746
Score = 368 bits (798), Expect = e-101
Identities = 146/161 (90%), Positives = 150/161 (93%)
Frame = +2 / +1
Query: 5 ELGNGLYNSGKPFIWVVRSNEEHKLSNELRDKCKERGLIVSWCPQLEVLAHKATGCFFTH 184
ELGNGLYNSGKPFIWVVRSNEEHKLSNELR KCKERGLIVSWC QLEVLAHKATGCFFTH
Sbjct: 88 ELGNGLYNSGKPFIWVVRSNEEHKLSNELRAKCKERGLIVSWCSQLEVLAHKATGCFFTH 267
Query: 185 CGWNSTLEAIVNGVPMAAIPHWADQPTISKYMESMWGLGVRVRKDEKGLVTRDEVERCIK 364
CGWNSTLEA+VNGVPM AIPHWADQPTISKYMES+WGLGVRVRKDEKGLVTRDEVERCIK
Sbjct: 268 CGWNSTLEAVVNGVPMVAIPHWADQPTISKYMESIWGLGVRVRKDEKGLVTRDEVERCIK 447
Query: 365 DVMDGDSKDKYRKSATMWMQKAKAAMQNGGSSAKNITEFAA 487
DVMDGD KD YR +A MWMQKAK AMQNGGSS KN+ EF A
Sbjct: 448 DVMDGDRKDNYRMNAIMWMQKAKEAMQNGGSSDKNVCEFVA 570
Score = 322 bits (697), Expect = 3e-087
Identities = 136/170 (80%), Positives = 142/170 (83%)
Frame = +3 / +2
Query: 6 SLAMDCTILANHSFGL*GQTKNTSCPMNFVTSARNVALLFLGAPSWKF*HIKLQVVSSHI 185
S AMDCTILANHSFGL*GQTKNT+CPMNFV SARNVAL FLGAPS KF*HIK QVVSSHI
Sbjct: 89 SWAMDCTILANHSFGL*GQTKNTNCPMNFVPSARNVALSFLGAPSSKF*HIKPQVVSSHI 268
Query: 186 ADGTRHWKQLLMVCQWRQYHTGQTSRPYQNIWRACGAWVSECARMRKAW*RGTRWKGASR 365
ADGTR WKQ LMVCQW QYH GQTSRPYQNIWRA G WVS CARMRK W*R TRWKGASR
Sbjct: 269 ADGTRRWKQ*LMVCQWWQYHIGQTSRPYQNIWRAYGDWVSGCARMRKVW*RETRWKGASR 448
Query: 366 MSWMVIVRISIGRVPLCGCKRPRQLCRMEGARPRILQNSPRSIL*VNFSN 515
M WM I RI IG PLCGCKRPR+ CRMEGAR R+ NS RSI ++F +
Sbjct: 449 MLWMGIERIIIG*TPLCGCKRPRKPCRMEGARTRMFVNSWRSIHQISFQS 598
Score = 279 bits (604), Expect = 2e-074
Identities = 118/170 (69%), Positives = 129/170 (75%)
Frame = +1 / +3
Query: 7 AWQWIVQFWQTIHLGCEVKRRXXXXXXXXXXXXXXWPYCFLVPPAGSSST*SYRLFLHTL 186
A QWIVQFWQTIHLGCEVKRR WPY FLV PA SSST*S+RLFLHTL
Sbjct: 90 AGQWIVQFWQTIHLGCEVKRRTQIVQ*TSCQVQGTWPYRFLVLPARSSST*SHRLFLHTL 269
Query: 187 RMELDIGSNC*WCANGGNTTLGRPADHIKIYGEHVGLGCPSAQXXXXXXXXXXXXKVHQG 366
RMELD GS+ *WCANGGNTTLGRPADHIKIYGEH+G+GCP AQ KVHQG
Sbjct: 270 RMELDAGSSS*WCANGGNTTLGRPADHIKIYGEHMGIGCPGAQG*ERFGDERRGGKVHQG 449
Query: 367 CHGW***G*V*EECHYVDAKGQGSYAEWRELGQEYYRIRREVFFKLIFQI 516
C+GW * G*+*+E HYVDAKGQGS+AEWRELGQE IR EVF KL+F++
Sbjct: 450 CYGWG*KG*L*DERHYVDAKGQGSHAEWRELGQECL*IRGEVFIKLVFKV 599
Score = 264 bits (570), Expect(2) = 3e-083
Identities = 103/119 (86%), Positives = 110/119 (92%)
Frame = -2 / -3
Query: 361 DAPFHLVPRYQAFLILAHSDTQAPHALHIF*YGRLVCPVWYCRHWHTINNCFQCRVPSAM 182
DAPFHLV R+Q FLILAH DTQ+P+ALHIF*YGRLVCP+WYC HWHTIN CFQ RVPSAM
Sbjct: 444 DAPFHLVSRHQTFLILAHPDTQSPYALHIF*YGRLVCPMWYCHHWHTINYCFQRRVPSAM 265
Query: 181 CEETTCSFMC*NFQLGAPRNNKATFLALVTKFIGQLVFFV*PHNPNEWFARIVQSIAKL 5
CEETTC FMC*NF+LGAPRN+KATFLAL TKFIGQ VFFV*PHNPNEWFARIVQSIA+L
Sbjct: 264 CEETTCGFMC*NFELGAPRNDKATFLALGTKFIGQFVFFV*PHNPNEWFARIVQSIAQL 88
Score = 231 bits (498), Expect(2) = 5e-073
Identities = 95/111 (85%), Positives = 96/111 (86%)
Frame = -3 / -1
Query: 336 VTKPFSSLRTRTPKPHMLSIYFDMVGWSAQCGIAAIGTPLTIASNVEFHPQCVKKQPVAL 157
VTKPFSSLRTRTP PHMLSIYFDMVGWSAQCGIA IGTPLT AS+VEFHPQCVKKQPVAL
Sbjct: 419 VTKPFSSLRTRTPNPHMLSIYFDMVGWSAQCGIATIGTPLTTASSVEFHPQCVKKQPVAL 240
Query: 156 CARTSSWGHQETIXXXXXXXXXXXLDNLCSSFDLTTQMNGLPELYNPLPSS 4
CARTSSW HQETI LDNLCSSFDLTTQMNGLPELYNPLPSS
Sbjct: 239 CARTSSWEHQETIRPRSLHLARSSLDNLCSSFDLTTQMNGLPELYNPLPSS 87
Score = 108 bits (231), Expect(3) = 7e-047
Identities = 42/48 (87%), Positives = 43/48 (89%)
Frame = -1 / -2
Query: 149 ELPAGGTKKQ*GHVPCTCHEVHWTTCVLRLTSQPK*MVCQNCTIHCQA 6
EL AG TKK+*GHVPCT HEVHWT CVLRLTSQPK*MVCQNCTIHC A
Sbjct: 232 ELRAGSTKKR*GHVPCTWHEVHWTICVLRLTSQPK*MVCQNCTIHCPA 89
Score = 66.1 bits (138), Expect(2) = 3e-083
Identities = 29/38 (76%), Positives = 30/38 (78%)
Frame = -1 / -2
Query: 509 KINLKNTSRRIL*YSWPSSLHSA*LPWPFAST*WHSSY 396
K NL NTS RI +S PSSLHSA LPWPFAST*W SSY
Sbjct: 592 KTNLMNTSPRIHKHSCPSSLHSAWLPWPFAST*WRSSY 479
Score = 64.8 bits (135), Expect(2) = 5e-073
Identities = 25/35 (71%), Positives = 30/35 (85%)
Frame = -3 / -1
Query: 510 KN*LKEYFAANSVIFLAELPPFCIAALAFCIHIVA 406
+N* EYFA NS FL+ELPPFC+A+LAFCIHI+A
Sbjct: 593 EN*FDEYFATNSQTFLSELPPFCMASLAFCIHIMA 489
Score = 60.6 bits (126), Expect(3) = 7e-047
Identities = 25/40 (62%), Positives = 26/40 (65%)
Frame = -1 / -2
Query: 359 CTFXXXXXXXXXXXPCALGHPSPTCSPYILIWSAGLPSVV 240
CTF PCA GHP P CSPYILIWSAGLP+VV
Sbjct: 442 CTFPPRLSSPNLSHPCAPGHPIPICSPYILIWSAGLPNVV 323
Score = 57.4 bits (119), Expect(3) = 7e-047
Identities = 26/34 (76%), Positives = 27/34 (79%)
Frame = -2 / -3
Query: 508 KLT*RILRGEFCNILGRAPSILHSCLGLLHPHSG 407
KL * ILR EF NIL RAPSILH LGLLHPH+G
Sbjct: 591 KLI**ILRHEFTNILVRAPSILHGFLGLLHPHNG 490
>gb|CW432748.1|CW432748 fsbb001f147k02f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f147k02, DNA
sequence
Length = 738
Score = 244 bits (527), Expect(2) = 4e-097
Identities = 95/107 (88%), Positives = 99/107 (92%)
Frame = +2 / -1
Query: 167 GCFFTHCGWNSTLEAIVNGVPMAAIPHWADQPTISKYMESMWGLGVRVRKDEKGLVTRDE 346
GCFFTHCGWNSTLEA+VNGVPM AIPHWADQPTISKYMES+WGLGVRVRKDEKGLVTRDE
Sbjct: 387 GCFFTHCGWNSTLEAVVNGVPMVAIPHWADQPTISKYMESIWGLGVRVRKDEKGLVTRDE 208
Query: 347 VERCIKDVMDGDSKDKYRKSATMWMQKAKAAMQNGGSSAKNITEFAA 487
VERCIKDVMDGD KD YR +ATMWMQKAK AMQNGGSS KN+ EF A
Sbjct: 207 VERCIKDVMDGDRKDNYRMNATMWMQKAKEAMQNGGSSDKNVCEFVA 67
Score = 222 bits (479), Expect(2) = 1e-084
Identities = 91/118 (77%), Positives = 97/118 (82%)
Frame = +3 / -2
Query: 162 LQVVSSHIADGTRHWKQLLMVCQWRQYHTGQTSRPYQNIWRACGAWVSECARMRKAW*RG 341
+QVVSSHIADGTR WKQ LMVCQW QYHTGQTSRPYQNIWRA G WVS CARMRKAW*R
Sbjct: 392 MQVVSSHIADGTRRWKQ*LMVCQWWQYHTGQTSRPYQNIWRAYGDWVSGCARMRKAW*RE 213
Query: 342 TRWKGASRMSWMVIVRISIGRVPLCGCKRPRQLCRMEGARPRILQNSPRSIL*VNFSN 515
TRWKGASRM WM I RI IG PLCGCKRPR+ CRMEGAR R+ NS RSI ++F +
Sbjct: 212 TRWKGASRMLWMGIERIIIG*TPLCGCKRPRKPCRMEGARTRMFVNSWRSIHQISFQS 39
Score = 204 bits (439), Expect(2) = 1e-069
Identities = 84/117 (71%), Positives = 94/117 (80%)
Frame = +1 / -3
Query: 166 RLFLHTLRMELDIGSNC*WCANGGNTTLGRPADHIKIYGEHVGLGCPSAQXXXXXXXXXX 345
RLFLHTLRMELD GS+ *WCANGGNTTLGRPADHIKIYGEH+G+GCP AQ
Sbjct: 388 RLFLHTLRMELDAGSSS*WCANGGNTTLGRPADHIKIYGEHMGIGCPGAQG*ERLGDERR 209
Query: 346 XXKVHQGCHGW***G*V*EECHYVDAKGQGSYAEWRELGQEYYRIRREVFFKLIFQI 516
KVHQGC+GW * G*+*+E HYVDAKGQGS+AEWRELGQE IR EVF KL+F++
Sbjct: 208 GGKVHQGCYGWG*KG*L*DERHYVDAKGQGSHAEWRELGQECL*IRGEVFIKLVFKV 38
Score = 155 bits (333), Expect(3) = 2e-081
Identities = 58/66 (87%), Positives = 61/66 (92%)
Frame = -2 / +1
Query: 361 DAPFHLVPRYQAFLILAHSDTQAPHALHIF*YGRLVCPVWYCRHWHTINNCFQCRVPSAM 182
DAPFHLV R+QAFLILAH DTQ+P+ALHIF*YGRLVCPVWYC HWHTIN CFQ RVPSAM
Sbjct: 193 DAPFHLVSRHQAFLILAHPDTQSPYALHIF*YGRLVCPVWYCHHWHTINYCFQRRVPSAM 372
Query: 181 CEETTC 164
CEETTC
Sbjct: 373 CEETTC 390
Score = 134 bits (288), Expect(3) = 2e-071
Identities = 53/57 (92%), Positives = 54/57 (94%)
Frame = -3 / +2
Query: 336 VTKPFSSLRTRTPKPHMLSIYFDMVGWSAQCGIAAIGTPLTIASNVEFHPQCVKKQP 166
VTKPFSSLRTRTP PHMLSIYFDMVGWSAQCGIA IGTPLT AS+VEFHPQCVKKQP
Sbjct: 218 VTKPFSSLRTRTPNPHMLSIYFDMVGWSAQCGIATIGTPLTTASSVEFHPQCVKKQP 388
Score = 132 bits (283), Expect(2) = 4e-097
Identities = 53/55 (96%), Positives = 53/55 (96%)
Frame = +2 / -3
Query: 5 ELGNGLYNSGKPFIWVVRSNEEHKLSNELRDKCKERGLIVSWCPQLEVLAHKATG 169
ELGNGLYNSGKPFIWVVRSNEEHKLSNELR KCKERGLIVSWC QLEVLAHKATG
Sbjct: 643 ELGNGLYNSGKPFIWVVRSNEEHKLSNELRAKCKERGLIVSWCSQLEVLAHKATG 479
Score = 121 bits (258), Expect(3) = 2e-081
Identities = 49/55 (89%), Positives = 52/55 (94%)
Frame = -2 / +2
Query: 169 TCSFMC*NFQLGAPRNNKATFLALVTKFIGQLVFFV*PHNPNEWFARIVQSIAKL 5
TC FMC*NF+LGAPRN+KATFLAL TKFIGQ VFFV*PHNPNEWFARIVQSIA+L
Sbjct: 479 TCGFMC*NFELGAPRNDKATFLALGTKFIGQFVFFV*PHNPNEWFARIVQSIAQL 643
Score = 112 bits (239), Expect(2) = 1e-084
Identities = 49/55 (89%), Positives = 50/55 (90%)
Frame = +3 / -1
Query: 6 SLAMDCTILANHSFGL*GQTKNTSCPMNFVTSARNVALLFLGAPSWKF*HIKLQV 170
S AMDCTILANHSFGL*GQTKNT+CPMNFV SARNVAL FLGAPS KF*HIK QV
Sbjct: 642 SWAMDCTILANHSFGL*GQTKNTNCPMNFVPSARNVALSFLGAPSSKF*HIKPQV 478
Score = 108 bits (231), Expect(3) = 2e-071
Identities = 42/48 (87%), Positives = 43/48 (89%)
Frame = -1 / +1
Query: 149 ELPAGGTKKQ*GHVPCTCHEVHWTTCVLRLTSQPK*MVCQNCTIHCQA 6
EL AG TKK+*GHVPCT HEVHWT CVLRLTSQPK*MVCQNCTIHC A
Sbjct: 499 ELRAGSTKKR*GHVPCTWHEVHWTICVLRLTSQPK*MVCQNCTIHCPA 642
Score = 102 bits (217), Expect(3) = 2e-045
Identities = 43/55 (78%), Positives = 43/55 (78%)
Frame = -3 / +3
Query: 168 PVALCARTSSWGHQETIXXXXXXXXXXXLDNLCSSFDLTTQMNGLPELYNPLPSS 4
PVALCARTSSW HQETI LDNLCSSFDLTTQMNGLPELYNPLPSS
Sbjct: 480 PVALCARTSSWEHQETIRPRSLHLARSSLDNLCSSFDLTTQMNGLPELYNPLPSS 644
Score = 80.8 bits (170), Expect(2) = 1e-069
Identities = 35/54 (64%), Positives = 36/54 (66%)
Frame = +1 / -2
Query: 7 AWQWIVQFWQTIHLGCEVKRRXXXXXXXXXXXXXXWPYCFLVPPAGSSST*SYR 168
A QWIVQFWQTIHLGCEVKRR WPY FLV PA SSST*S+R
Sbjct: 641 AGQWIVQFWQTIHLGCEVKRRTQIVQ*TSCQVQGTWPYRFLVLPARSSST*SHR 480
Score = 66.1 bits (138), Expect(3) = 2e-071
Identities = 29/38 (76%), Positives = 30/38 (78%)
Frame = -1 / +3
Query: 509 KINLKNTSRRIL*YSWPSSLHSA*LPWPFAST*WHSSY 396
K NL NTS RI +S PSSLHSA LPWPFAST*W SSY
Sbjct: 45 KTNLMNTSPRIHKHSCPSSLHSAWLPWPFAST*WRSSY 158
Score = 66.1 bits (138), Expect(3) = 2e-081
Identities = 26/35 (74%), Positives = 30/35 (85%)
Frame = -3 / +2
Query: 510 KN*LKEYFAANSVIFLAELPPFCIAALAFCIHIVA 406
+N* EYFA NS FL+ELPPFC+A+LAFCIHIVA
Sbjct: 44 EN*FDEYFATNSQTFLSELPPFCMASLAFCIHIVA 148
Score = 62.5 bits (130), Expect(3) = 2e-045
Identities = 26/40 (65%), Positives = 26/40 (65%)
Frame = -1 / +3
Query: 359 CTFXXXXXXXXXXXPCALGHPSPTCSPYILIWSAGLPSVV 240
CTF PCA GHP P CSPYILIWSAGLPSVV
Sbjct: 195 CTFPPRLSSPSLSHPCAPGHPIPICSPYILIWSAGLPSVV 314
Score = 58.8 bits (122), Expect(3) = 2e-045
Identities = 27/34 (79%), Positives = 27/34 (79%)
Frame = -2 / +1
Query: 508 KLT*RILRGEFCNILGRAPSILHSCLGLLHPHSG 407
KL * ILR EF NIL RAPSILH LGLLHPHSG
Sbjct: 46 KLI**ILRHEFTNILVRAPSILHGFLGLLHPHSG 147
>gb|CD424348.1|CD424348 SA1_5_E09.b1_A002 Salicylic acid-treated seedlings Sorghum bicolor
cDNA clone SA1_5_E09_A002 3', mRNA sequence
Length = 606
Score = 325 bits (703), Expect = 6e-088
Identities = 129/144 (89%), Positives = 133/144 (92%)
Frame = +2 / +2
Query: 56 RSNEEHKLSNELRDKCKERGLIVSWCPQLEVLAHKATGCFFTHCGWNSTLEAIVNGVPMA 235
RSNEEHKLSNELR KCKERGLIVSWC QLEVLAHKATGCFFTHCGWNSTLEA+VNGVPM
Sbjct: 17 RSNEEHKLSNELRAKCKERGLIVSWCSQLEVLAHKATGCFFTHCGWNSTLEAVVNGVPMV 196
Query: 236 AIPHWADQPTISKYMESMWGLGVRVRKDEKGLVTRDEVERCIKDVMDGDSKDKYRKSATM 415
AIPHWADQPTISKYMES+WGLGVRVRKDEKGLVTRDEVERCIKDVMDGD KD YR +A M
Sbjct: 197 AIPHWADQPTISKYMESIWGLGVRVRKDEKGLVTRDEVERCIKDVMDGDRKDNYRMNAPM 376
Query: 416 WMQKAKAAMQNGGSSAKNITEFAA 487
WMQKAK AMQNGGSS KN+ EF A
Sbjct: 377 WMQKAKEAMQNGGSSDKNVCEFVA 448
Score = 291 bits (629), Expect = 7e-078
Identities = 122/153 (79%), Positives = 128/153 (83%)
Frame = +3 / +3
Query: 57 GQTKNTSCPMNFVTSARNVALLFLGAPSWKF*HIKLQVVSSHIADGTRHWKQLLMVCQWR 236
GQTKNT+CPMNFV SARNVAL FLGAPS KF*HIK QVVSSHIADGTR WKQ LMVCQW
Sbjct: 18 GQTKNTNCPMNFVPSARNVALSFLGAPSSKF*HIKPQVVSSHIADGTRRWKQ*LMVCQWW 197
Query: 237 QYHTGQTSRPYQNIWRACGAWVSECARMRKAW*RGTRWKGASRMSWMVIVRISIGRVPLC 416
QYHTGQTSRPYQNIWRA G WVS CARMRKAW*R TRWKGASRM WM I RI IG PLC
Sbjct: 198 QYHTGQTSRPYQNIWRAYGDWVSGCARMRKAW*RETRWKGASRMLWMGIERIIIG*TPLC 377
Query: 417 GCKRPRQLCRMEGARPRILQNSPRSIL*VNFSN 515
GCKRPR+ CRMEGAR R+ NS RSI ++F +
Sbjct: 378 GCKRPRKPCRMEGARTRMFVNSWRSIHQISFQS 476
Score = 236 bits (510), Expect = 2e-061
Identities = 103/156 (66%), Positives = 114/156 (73%)
Frame = +1 / +1
Query: 49 GCEVKRRXXXXXXXXXXXXXXWPYCFLVPPAGSSST*SYRLFLHTLRMELDIGSNC*WCA 228
G EVKRR WPY FLV PA SSST*S+RLFLHTLRMELD GS+ *WCA
Sbjct: 10 GLEVKRRTQIVQ*TSCQVQGTWPYRFLVLPARSSST*SHRLFLHTLRMELDAGSSS*WCA 189
Query: 229 NGGNTTLGRPADHIKIYGEHVGLGCPSAQXXXXXXXXXXXXKVHQGCHGW***G*V*EEC 408
NGGNTTLGRPADHIKIYGEH+G+GCP AQ KVHQGC+GW * G*+*+E
Sbjct: 190 NGGNTTLGRPADHIKIYGEHMGIGCPGAQG*ERLGDERRGGKVHQGCYGWG*KG*L*DER 369
Query: 409 HYVDAKGQGSYAEWRELGQEYYRIRREVFFKLIFQI 516
YVDAKGQGS+AEWRELGQE IR EVF KL+F++
Sbjct: 370 PYVDAKGQGSHAEWRELGQECL*IRGEVFIKLVFKV 477
Score = 226 bits (489), Expect(2) = 3e-071
Identities = 89/102 (87%), Positives = 94/102 (92%)
Frame = -2 / -3
Query: 361 DAPFHLVPRYQAFLILAHSDTQAPHALHIF*YGRLVCPVWYCRHWHTINNCFQCRVPSAM 182
DAPFHLV R+QAFLILAH DTQ+P+ALHIF*YGRLVCPVWYC HWHTIN CFQ RVPSAM
Sbjct: 322 DAPFHLVSRHQAFLILAHPDTQSPYALHIF*YGRLVCPVWYCHHWHTINYCFQRRVPSAM 143
Query: 181 CEETTCSFMC*NFQLGAPRNNKATFLALVTKFIGQLVFFV*P 56
CEETTC FMC*NF+LGAPRN+KATFLAL TKFIGQ VFFV*P
Sbjct: 142 CEETTCGFMC*NFELGAPRNDKATFLALGTKFIGQFVFFV*P 17
Score = 189 bits (407), Expect(2) = 4e-059
Identities = 78/94 (82%), Positives = 79/94 (84%)
Frame = -3 / -1
Query: 336 VTKPFSSLRTRTPKPHMLSIYFDMVGWSAQCGIAAIGTPLTIASNVEFHPQCVKKQPVAL 157
VTKPFSSLRTRTP PHMLSIYFDMVGWSAQCGIA IGTPLT AS+VEFHPQCVKKQPVAL
Sbjct: 297 VTKPFSSLRTRTPNPHMLSIYFDMVGWSAQCGIATIGTPLTTASSVEFHPQCVKKQPVAL 118
Query: 156 CARTSSWGHQETIXXXXXXXXXXXLDNLCSSFDL 55
CARTSSW HQETI LDNLCSSFDL
Sbjct: 117 CARTSSWEHQETIRPRSLHLARSSLDNLCSSFDL 16
Score = 73.0 bits (153), Expect(3) = 1e-036
Identities = 28/34 (82%), Positives = 29/34 (85%)
Frame = -1 / -2
Query: 149 ELPAGGTKKQ*GHVPCTCHEVHWTTCVLRLTSQP 48
EL AG TKK+*GHVPCT HEVHWT CVLRLTS P
Sbjct: 110 ELRAGSTKKR*GHVPCTWHEVHWTICVLRLTSNP 9
Score = 62.9 bits (131), Expect(2) = 3e-071
Identities = 25/35 (71%), Positives = 29/35 (82%)
Frame = -3 / -1
Query: 510 KN*LKEYFAANSVIFLAELPPFCIAALAFCIHIVA 406
+N* EYFA NS FL+ELPPFC+A+LAFCIHI A
Sbjct: 471 EN*FDEYFATNSQTFLSELPPFCMASLAFCIHIGA 367
Score = 62.5 bits (130), Expect(3) = 1e-036
Identities = 26/40 (65%), Positives = 26/40 (65%)
Frame = -1 / -2
Query: 359 CTFXXXXXXXXXXXPCALGHPSPTCSPYILIWSAGLPSVV 240
CTF PCA GHP P CSPYILIWSAGLPSVV
Sbjct: 320 CTFPPRLSSPSLSHPCAPGHPIPICSPYILIWSAGLPSVV 201
Score = 60.2 bits (125), Expect(2) = 4e-059
Identities = 28/38 (73%), Positives = 29/38 (76%)
Frame = -1 / -2
Query: 509 KINLKNTSRRIL*YSWPSSLHSA*LPWPFAST*WHSSY 396
K NL NTS RI +S PSSLHSA LPWPFAST* SSY
Sbjct: 470 KTNLMNTSPRIHKHSCPSSLHSAWLPWPFAST*GRSSY 357
Score = 56.5 bits (117), Expect(3) = 1e-036
Identities = 26/34 (76%), Positives = 26/34 (76%)
Frame = -2 / -3
Query: 508 KLT*RILRGEFCNILGRAPSILHSCLGLLHPHSG 407
KL * ILR EF NIL RAPSILH LGLLHPH G
Sbjct: 469 KLI**ILRHEFTNILVRAPSILHGFLGLLHPHRG 368
>gb|CW150106.1|CW150106 104_549_11142853_116_36303_057 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11142853, DNA
sequence
Length = 658
Score = 284 bits (615), Expect = 8e-076
Identities = 109/161 (67%), Positives = 136/161 (84%)
Frame = +2 / -3
Query: 5 ELGNGLYNSGKPFIWVVRSNEEHKLSNELRDKCKERGLIVSWCPQLEVLAHKATGCFFTH 184
ELG+GL +SG+PFIWVVRS E KLS +L ++C+E+GLIVSWCPQL+VL+HKATGCF TH
Sbjct: 512 ELGSGLCDSGRPFIWVVRSGEAQKLSQDLGERCREKGLIVSWCPQLDVLSHKATGCFITH 333
Query: 185 CGWNSTLEAIVNGVPMAAIPHWADQPTISKYMESMWGLGVRVRKDEKGLVTRDEVERCIK 364
CGWNST EAIV GVPM +P ADQPT +KY+ES W +G+R++ DEKGLV R+EVERCI+
Sbjct: 332 CGWNSTTEAIVAGVPMVGLPRSADQPTAAKYVESAWRIGLRMQLDEKGLVRREEVERCIR 153
Query: 365 DVMDGDSKDKYRKSATMWMQKAKAAMQNGGSSAKNITEFAA 487
+VM+G+ KD++R++A WM+KAK AMQ GGSS KNI EFAA
Sbjct: 152 EVMEGERKDEFRQNAARWMKKAKEAMQEGGSSDKNIAEFAA 30
Score = 194 bits (419), Expect = 7e-049
Identities = 88/164 (53%), Positives = 102/164 (62%)
Frame = -3 / +1
Query: 495 EYFAANSVIFLAELPPFCIAALAFCIHIVALFXXXXXXXXXXXXXXXXXXXXLVTKPFSS 316
+YFAANS +FL+ELPP CIA+LAF IH+ A L+TKPFSS
Sbjct: 22 KYFAANSAMFLSELPPSCIASLAFFIHLAAFCLNSSFLSPSITSRMHLSTSSLLTKPFSS 201
Query: 315 LRTRTPKPHMLSIYFDMVGWSAQCGIAAIGTPLTIASNVEFHPQCVKKQPVALCARTSSW 136
R P H LS YF VGWSA G +GTP TIAS VEFHPQCV KQPVALC +TSS
Sbjct: 202 SCIRRPILHALSTYFAAVGWSADRGKPTMGTPATIASVVEFHPQCVMKQPVALCDKTSS* 381
Query: 135 GHQETIXXXXXXXXXXXLDNLCSSFDLTTQMNGLPELYNPLPSS 4
GHQ+T+ D+ C+S DLTTQM GLPE ++PLPSS
Sbjct: 382 GHQDTMRPFSLHLSPRSWDSFCASPDLTTQMKGLPESHSPLPSS 513
Score = 112 bits (240), Expect = 3e-024
Identities = 64/163 (39%), Positives = 80/163 (49%)
Frame = +3 / -1
Query: 6 SLAMDCTILANHSFGL*GQTKNTSCPMNFVTSARNVALLFLGAPSWKF*HIKLQVVSSHI 185
S A C I A S G *G + SCP A A GA S I+ Q SS
Sbjct: 511 SSAAGCAIPAGPSSGS*GPARRRSCPKTSARGAGRRASSCPGALS*MSCRIRPQAASSRT 332
Query: 186 ADGTRHWKQLLMVCQWRQYHTGQTSRPYQNIWRACGAWVSECARMRKAW*RGTRWKGASR 365
A GTR ++ C W +TS+ ++ WRA G V C+ R+AW* G RW+GAS
Sbjct: 331 AGGTRRRRRSSPACPWWACRGRRTSQRRRSTWRARGGSVCGCSLTRRAW*GGRRWRGASG 152
Query: 366 MSWMVIVRISIGRVPLCGCKRPRQLCRMEGARPRILQNSPRSI 494
W R+S GR+ G +RPR+ CR EGA R L N +SI
Sbjct: 151 R*WKGRGRMSSGRMRRDG*RRPRKRCRKEGALTRTLLNLQQSI 23
Score = 83.5 bits (176), Expect(2) = 2e-021
Identities = 43/119 (36%), Positives = 63/119 (52%)
Frame = -2 / +3
Query: 361 DAPFHLVPRYQAFLILAHSDTQAPHALHIF*YGRLVCPVWYCRHWHTINNCFQCRVPSAM 182
DAP HL+P +QA L+ H T P ALH+ LV H H ++ + RVP A+
Sbjct: 156 DAPLHLLPPHQALLVKLHPQTDPPRALHVLRRRWLVRRPRQAHHGHAGDDRLRRRVPPAV 335
Query: 181 CEETTCSFMC*NFQLGAPRNNKATFLALVTKFIGQLVFFV*PHNPNEWFARIVQSIAKL 5
+E C M + L AP +++A A + + +GQL+ PH+P+E A I Q A+L
Sbjct: 336 RDEAACGLMRQDI*LRAPGHDEALLPAPLAEVLGQLLRLAGPHDPDEGPAGIAQPAAEL 512
Score = 39.6 bits (80), Expect(2) = 2e-021
Identities = 17/26 (65%), Positives = 19/26 (73%)
Frame = -2 / +3
Query: 493 ILRGEFCNILGRAPSILHSCLGLLHP 416
IL +F N+L RAPS LH LGLLHP
Sbjct: 24 ILCCKFSNVLVRAPSFLHRFLGLLHP 101
>gb|CW150107.1|CW150107 104_549_11142853_148_36304_057 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11142853, DNA
sequence
Length = 701
Score = 258 bits (558), Expect = 6e-068
Identities = 97/146 (66%), Positives = 124/146 (84%)
Frame = +2 / +3
Query: 5 ELGNGLYNSGKPFIWVVRSNEEHKLSNELRDKCKERGLIVSWCPQLEVLAHKATGCFFTH 184
ELG+GL +SG+PFIWVVRS E KLS +L ++C+E+GLIVSWCPQL+VL+HKATGCF TH
Sbjct: 264 ELGSGLCDSGRPFIWVVRSGEAQKLSQDLGERCREKGLIVSWCPQLDVLSHKATGCFITH 443
Query: 185 CGWNSTLEAIVNGVPMAAIPHWADQPTISKYMESMWGLGVRVRKDEKGLVTRDEVERCIK 364
CGWNST EAIV GVPM +P ADQPT +KY+ES W +G+R++ DEKGLV R+EVERCI+
Sbjct: 444 CGWNSTTEAIVAGVPMVGLPRSADQPTAAKYVESAWRIGLRMQLDEKGLVRREEVERCIR 623
Query: 365 DVMDGDSKDKYRKSATMWMQKAKAAM 442
+VM+G+ KD++R++A WM+KAK AM
Sbjct: 624 EVMEGERKDEFRQNAARWMKKAKEAM 701
Score = 160 bits (345), Expect = 1e-038
Identities = 75/146 (51%), Positives = 86/146 (58%)
Frame = -3 / -2
Query: 441 IAALAFCIHIVALFXXXXXXXXXXXXXXXXXXXXLVTKPFSSLRTRTPKPHMLSIYFDMV 262
IA+LAF IH+ A L+TKPFSS R P H LS YF V
Sbjct: 700 IASLAFFIHLAAFCLNSSFLSPSITSRMHLSTSSLLTKPFSSSCIRRPILHALSTYFAAV 521
Query: 261 GWSAQCGIAAIGTPLTIASNVEFHPQCVKKQPVALCARTSSWGHQETIXXXXXXXXXXXL 82
GWSA G +GTP TIAS VEFHPQCV KQPVALC +TSS GHQ+T+
Sbjct: 520 GWSADRGKPTMGTPATIASVVEFHPQCVMKQPVALCDKTSS*GHQDTMRPFSLHLSPRSW 341
Query: 81 DNLCSSFDLTTQMNGLPELYNPLPSS 4
D+ C+S DLTTQM GLPE ++PLPSS
Sbjct: 340 DSFCASPDLTTQMKGLPESHSPLPSS 263
>gb|CD224613.1|CD224613 CCC1_35_F08.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_35_F08_A007 3', mRNA sequence
Length = 609
Score = 171 bits (368), Expect(2) = 5e-064
Identities = 63/89 (70%), Positives = 77/89 (86%)
Frame = +2 / +3
Query: 50 VVRSNEEHKLSNELRDKCKERGLIVSWCPQLEVLAHKATGCFFTHCGWNSTLEAIVNGVP 229
V+RS+E KLS +L KCKE+GL+V +CPQLEVLAHKATGCF THCGWNST+E++ GVP
Sbjct: 3 VLRSDEAEKLSRQLGGKCKEKGLVVPFCPQLEVLAHKATGCFLTHCGWNSTIESMATGVP 182
Query: 230 MAAIPHWADQPTISKYMESMWGLGVRVRK 316
MAA+P WADQPT +KY+ES WG+GVR+RK
Sbjct: 183 MAAMPQWADQPTTAKYVESAWGIGVRMRK 269
Score = 114 bits (244), Expect(2) = 1e-036
Identities = 50/88 (56%), Positives = 58/88 (65%)
Frame = -3 / -3
Query: 312 RTRTPKPHMLSIYFDMVGWSAQCGIAAIGTPLTIASNVEFHPQCVKKQPVALCARTSSWG 133
R RTP PH LS Y +VGWSA CGIAAIGTP+ + S VEFHPQCV+KQPVALCA TSS G
Sbjct: 265 RIRTPIPHALSTYLAVVGWSAHCGIAAIGTPVAMDSIVEFHPQCVRKQPVALCASTSS*G 86
Query: 132 HQETIXXXXXXXXXXXLDNLCSSFDLTT 49
+ T D+ +S DL+T
Sbjct: 85 QKGTTRPFSLHLPPSCRDSFSASSDLST 2
Score = 94.5 bits (200), Expect(2) = 5e-064
Identities = 37/55 (67%), Positives = 47/55 (85%)
Frame = +2 / +3
Query: 323 KGLVTRDEVERCIKDVMDGDSKDKYRKSATMWMQKAKAAMQNGGSSAKNITEFAA 487
KGLV R+EVERCI++VM+G+ KD++R++A WM+KAK AMQ GGSS KNI EFAA
Sbjct: 267 KGLVRREEVERCIREVMEGERKDEFRQNAARWMKKAKEAMQEGGSSDKNIAEFAA 431
Score = 59.3 bits (123), Expect(2) = 1e-036
Identities = 26/58 (44%), Positives = 32/58 (55%)
Frame = -3 / -3
Query: 495 EYFAANSVIFLAELPPFCIAALAFCIHIVALFXXXXXXXXXXXXXXXXXXXXLVTKPF 322
+YFAANS +FL+ELPP CIA+LAF IH+ A L+TKPF
Sbjct: 439 KYFAANSAMFLSELPPSCIASLAFFIHLAAFCLNSSFLSPSITSRMHLSTSSLLTKPF 266
>gb|CB928358.1|CB928358 ABA1_15_H11.b1_A012 Abscisic acid-treated seedlings Sorghum bicolor
cDNA clone ABA1_15_H11_A012 3', mRNA sequence
Length = 679
Score = 240 bits (519), Expect = 1e-062
Identities = 89/159 (55%), Positives = 119/159 (74%)
Frame = +2 / +3
Query: 5 ELGNGLYNSGKPFIWVVRSNEEHKLSNELRDKCKERGLIVSWCPQLEVLAHKATGCFFTH 184
E+ GLY+SGKPF+WVVR++E K+ ++ DK ERGL+ +W QLEVLAH A GCF TH
Sbjct: 21 EVAEGLYSSGKPFLWVVRASETSKIPDKFADKANERGLVATWSAQLEVLAHPAVGCFVTH 200
Query: 185 CGWNSTLEAIVNGVPMAAIPHWADQPTISKYMESMWGLGVRVRKDEKGLVTRDEVERCIK 364
CGWNST E + GVPM A+P W+DQP +KY+E +W +GVRVR D+ G+V ++EVERC++
Sbjct: 201 CGWNSTTEGLSAGVPMVAMPQWSDQPVNAKYIEDVWRVGVRVRPDKDGVVRKEEVERCVR 380
Query: 365 DVMDGDSKDKYRKSATMWMQKAKAAMQNGGSSAKNITEF 481
+VMDGD +Y+++A W +KA+ AM GGSS NI EF
Sbjct: 381 EVMDGDRSMEYQQNAAEWKEKARKAMSAGGSSDNNIKEF 497
Score = 81.7 bits (172), Expect(3) = 1e-022
Identities = 37/66 (56%), Positives = 40/66 (60%)
Frame = -3 / -1
Query: 336 VTKPFSSLRTRTPKPHMLSIYFDMVGWSAQCGIAAIGTPLTIASNVEFHPQCVKKQPVAL 157
+T P S RTRTP H S+Y G S CGIA +GTP S VEFHPQCV K P A
Sbjct: 352 LTTPSLSGRTRTPTLHTSSMYLAFTG*SDHCGIATMGTPALSPSVVEFHPQCVTKHPTAG 173
Query: 156 CARTSS 139
CA TSS
Sbjct: 172 CASTSS 155
Score = 31.8 bits (63), Expect(3) = 1e-022
Identities = 13/25 (52%), Positives = 17/25 (68%)
Frame = -3 / -1
Query: 480 NSVIFLAELPPFCIAALAFCIHIVA 406
NS++ L+ELPP +A LAF H A
Sbjct: 496 NSLMLLSELPPALMAFLAFSFHSAA 422
Score = 30.9 bits (61), Expect(3) = 1e-022
Identities = 12/18 (66%), Positives = 13/18 (72%)
Frame = -3 / -1
Query: 57 LTTQMNGLPELYNPLPSS 4
LTT NGLPELY P +S
Sbjct: 73 LTTHRNGLPELYRPSATS 20
>gb|CW404739.1|CW404739 fsbb001f097a06k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f097a06, DNA
sequence
Length = 690
Score = 238 bits (514), Expect = 7e-062
Identities = 88/159 (55%), Positives = 119/159 (74%)
Frame = +2 / -2
Query: 5 ELGNGLYNSGKPFIWVVRSNEEHKLSNELRDKCKERGLIVSWCPQLEVLAHKATGCFFTH 184
E+ GLY+SGKPF+WVVR++E K+ ++ DK ERGL+ +W QLEVLAH A GCF TH
Sbjct: 584 EVAEGLYSSGKPFLWVVRASETSKIPDKFADKANERGLVATWSAQLEVLAHPAVGCFVTH 405
Query: 185 CGWNSTLEAIVNGVPMAAIPHWADQPTISKYMESMWGLGVRVRKDEKGLVTRDEVERCIK 364
CGWNST E + GVPM A+P W+DQP +KY+E +W +GVRVR D+ G+V ++EVERC++
Sbjct: 404 CGWNSTTEGLSAGVPMVAMPQWSDQPVNAKYIEDVWRVGVRVRPDKDGVVRKEEVERCVR 225
Query: 365 DVMDGDSKDKYRKSATMWMQKAKAAMQNGGSSAKNITEF 481
+VMDG+ +Y+++A W +KA+ AM GGSS NI EF
Sbjct: 224 EVMDGERSMEYQQNAADWKEKARKAMSAGGSSDNNIKEF 108
Score = 81.7 bits (172), Expect(3) = 2e-021
Identities = 37/66 (56%), Positives = 40/66 (60%)
Frame = -3 / +1
Query: 336 VTKPFSSLRTRTPKPHMLSIYFDMVGWSAQCGIAAIGTPLTIASNVEFHPQCVKKQPVAL 157
+T P S RTRTP H S+Y G S CGIA +GTP S VEFHPQCV K P A
Sbjct: 253 LTTPSLSGRTRTPTLHTSSMYLAFTG*SDHCGIATMGTPALSPSVVEFHPQCVTKHPTAG 432
Query: 156 CARTSS 139
CA TSS
Sbjct: 433 CASTSS 450
Score = 30.9 bits (61), Expect(3) = 2e-021
Identities = 12/18 (66%), Positives = 13/18 (72%)
Frame = -3 / +1
Query: 57 LTTQMNGLPELYNPLPSS 4
LTT NGLPELY P +S
Sbjct: 532 LTTHRNGLPELYRPSATS 585
Score = 28.1 bits (55), Expect(3) = 2e-021
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = -3 / +1
Query: 480 NSVIFLAELPPFCIAALAFCIHIVA 406
NS++ L+ELPP +A LAF A
Sbjct: 109 NSLMLLSELPPALMAFLAFSFQSAA 183
>gb|CN144834.1|CN144834 WOUND1_25_E11.b2_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_25_E11_A002 3', mRNA sequence
Length = 631
Score = 238 bits (514), Expect = 7e-062
Identities = 88/159 (55%), Positives = 119/159 (74%)
Frame = +2 / +1
Query: 5 ELGNGLYNSGKPFIWVVRSNEEHKLSNELRDKCKERGLIVSWCPQLEVLAHKATGCFFTH 184
E+ GLY+SGKPF+WVVR++E K+ ++ DK ERGL+ +W QLEVLAH A GCF TH
Sbjct: 25 EVAEGLYSSGKPFLWVVRASETSKIPDKFADKANERGLVATWSAQLEVLAHPAVGCFVTH 204
Query: 185 CGWNSTLEAIVNGVPMAAIPHWADQPTISKYMESMWGLGVRVRKDEKGLVTRDEVERCIK 364
CGWNST E + GVPM A+P W+DQP +KY+E +W +GVRVR D+ G+V ++EVERC++
Sbjct: 205 CGWNSTTEGLSAGVPMVAMPQWSDQPVNAKYIEDVWRVGVRVRPDKDGVVRKEEVERCVR 384
Query: 365 DVMDGDSKDKYRKSATMWMQKAKAAMQNGGSSAKNITEF 481
+VMDG+ +Y+++A W +KA+ AM GGSS NI EF
Sbjct: 385 EVMDGERSMEYQQNAADWKEKARKAMSAGGSSDNNIKEF 501
Score = 81.7 bits (172), Expect(3) = 2e-021
Identities = 37/66 (56%), Positives = 40/66 (60%)
Frame = -3 / -3
Query: 336 VTKPFSSLRTRTPKPHMLSIYFDMVGWSAQCGIAAIGTPLTIASNVEFHPQCVKKQPVAL 157
+T P S RTRTP H S+Y G S CGIA +GTP S VEFHPQCV K P A
Sbjct: 356 LTTPSLSGRTRTPTLHTSSMYLAFTG*SDHCGIATMGTPALSPSVVEFHPQCVTKHPTAG 177
Query: 156 CARTSS 139
CA TSS
Sbjct: 176 CASTSS 159
Score = 30.9 bits (61), Expect(3) = 2e-021
Identities = 12/18 (66%), Positives = 13/18 (72%)
Frame = -3 / -3
Query: 57 LTTQMNGLPELYNPLPSS 4
LTT NGLPELY P +S
Sbjct: 77 LTTHRNGLPELYRPSATS 24
Score = 28.1 bits (55), Expect(3) = 2e-021
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = -3 / -3
Query: 480 NSVIFLAELPPFCIAALAFCIHIVA 406
NS++ L+ELPP +A LAF A
Sbjct: 500 NSLMLLSELPPALMAFLAFSFQSAA 426
>gb|AW677595.1|AW677595 DG1_8_E07.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 530
Score = 228 bits (492), Expect = 7e-059
Identities = 87/126 (69%), Positives = 107/126 (84%)
Frame = +2 / +3
Query: 110 RGLIVSWCPQLEVLAHKATGCFFTHCGWNSTLEAIVNGVPMAAIPHWADQPTISKYMESM 289
+GLIVSWCPQL+VL+HKATGCF THCGWNST EAIV GVPM +P ADQPT +KY+ES
Sbjct: 3 KGLIVSWCPQLDVLSHKATGCFITHCGWNSTTEAIVAGVPMVGLPRSADQPTAAKYVESA 182
Query: 290 WGLGVRVRKDEKGLVTRDEVERCIKDVMDGDSKDKYRKSATMWMQKAKAAMQNGGSSAKN 469
W +G+R++ DEKGLV R+EVERCI++VM+G+ KD++R++A WM+KAK AMQ GGSS KN
Sbjct: 183 WRIGLRMQLDEKGLVRREEVERCIREVMEGERKDEFRQNAARWMKKAKEAMQEGGSSDKN 362
Query: 470 ITEFAA 487
I EFAA
Sbjct: 363 IAEFAA 380
Score = 156 bits (335), Expect = 3e-037
Identities = 70/126 (55%), Positives = 80/126 (63%)
Frame = -3 / -2
Query: 495 EYFAANSVIFLAELPPFCIAALAFCIHIVALFXXXXXXXXXXXXXXXXXXXXLVTKPFSS 316
+YFAANS +FL+ELPP CIA+LAF IH+ A L+TKPFSS
Sbjct: 388 KYFAANSAMFLSELPPSCIASLAFFIHLAAFCLNSSFLSPSITSRMHLSTSSLLTKPFSS 209
Query: 315 LRTRTPKPHMLSIYFDMVGWSAQCGIAAIGTPLTIASNVEFHPQCVKKQPVALCARTSSW 136
R P H LS YF VGWSA G +GTP TIAS VEFHPQCV KQPVALC +TSS
Sbjct: 208 SCIRRPILHALSTYFAAVGWSADRGKPTMGTPATIASVVEFHPQCVMKQPVALCDKTSS* 29
Query: 135 GHQETI 118
GHQ+T+
Sbjct: 28 GHQDTM 11
>gb|CD227847.1|CD227847 CCC1_56_A04.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_56_A04_A007 3', mRNA sequence
Length = 630
Score = 225 bits (486), Expect = 5e-058
Identities = 83/150 (55%), Positives = 112/150 (74%)
Frame = +2 / +1
Query: 32 GKPFIWVVRSNEEHKLSNELRDKCKERGLIVSWCPQLEVLAHKATGCFFTHCGWNSTLEA 211
GKPF+WVVR++E K+ ++ DK ERGL+ +W QLEVLAH A GCF THCGWNST E
Sbjct: 1 GKPFLWVVRASETSKIPDKFADKANERGLVATWSAQLEVLAHPAVGCFVTHCGWNSTTEG 180
Query: 212 IVNGVPMAAIPHWADQPTISKYMESMWGLGVRVRKDEKGLVTRDEVERCIKDVMDGDSKD 391
+ GVPM A+P W+DQP +KY+E +W +GVRVR D+ G+V ++EVERC+++VMDG+
Sbjct: 181 LSAGVPMVAMPQWSDQPVNAKYIEDVWRVGVRVRPDKDGVVRKEEVERCVREVMDGERSM 360
Query: 392 KYRKSATMWMQKAKAAMQNGGSSAKNITEF 481
+Y+++A W +KA+ AM GGSS NI EF
Sbjct: 361 EYQQNAADWKEKARKAMSAGGSSDNNIKEF 450
>gb|CB928778.1|CB928778 ABA1_24_C06.b1_A012 Abscisic acid-treated seedlings Sorghum bicolor
cDNA clone ABA1_24_C06_A012 3', mRNA sequence
Length = 513
Score = 222 bits (480), Expect = 3e-057
Identities = 88/101 (87%), Positives = 92/101 (91%)
Frame = +2 / +3
Query: 185 CGWNSTLEAIVNGVPMAAIPHWADQPTISKYMESMWGLGVRVRKDEKGLVTRDEVERCIK 364
CGWNSTLEA+VNGVPM AIPHWADQPTISKYMES+WGLGVRVRKDEKGLVTRDEV RCIK
Sbjct: 3 CGWNSTLEAVVNGVPMVAIPHWADQPTISKYMESIWGLGVRVRKDEKGLVTRDEVGRCIK 182
Query: 365 DVMDGDSKDKYRKSATMWMQKAKAAMQNGGSSAKNITEFAA 487
DVMDGD KD YR +ATMWMQKAK AMQNGGSS KN+ EF A
Sbjct: 183 DVMDGDRKDNYRMNATMWMQKAKEAMQNGGSSDKNVCEFVA 305
Score = 206 bits (444), Expect = 2e-052
Identities = 84/111 (75%), Positives = 90/111 (81%)
Frame = +3 / +1
Query: 183 IADGTRHWKQLLMVCQWRQYHTGQTSRPYQNIWRACGAWVSECARMRKAW*RGTRWKGAS 362
IADGTR WKQ LMVCQW QYHTGQTSRPYQNIWRA G WVS CARMRKAW*R TRW+GAS
Sbjct: 1 IADGTRRWKQ*LMVCQWWQYHTGQTSRPYQNIWRAYGDWVSGCARMRKAW*RETRWEGAS 180
Query: 363 RMSWMVIVRISIGRVPLCGCKRPRQLCRMEGARPRILQNSPRSIL*VNFSN 515
RM WM I RI IG PLCGCKRPR+ CRMEGAR R+ NS RSI ++F +
Sbjct: 181 RMLWMGIERIIIG*TPLCGCKRPRKPCRMEGARTRMFVNSWRSIHQISFQS 333
Score = 189 bits (407), Expect = 3e-047
Identities = 78/111 (70%), Positives = 88/111 (79%)
Frame = +1 / +2
Query: 184 LRMELDIGSNC*WCANGGNTTLGRPADHIKIYGEHVGLGCPSAQXXXXXXXXXXXXKVHQ 363
LRMELD GS+ *WCANGGNTTLGRPADHIKIYGEH+G+GCP AQ KVHQ
Sbjct: 2 LRMELDAGSSS*WCANGGNTTLGRPADHIKIYGEHMGIGCPGAQG*ERLGDERRGGKVHQ 181
Query: 364 GCHGW***G*V*EECHYVDAKGQGSYAEWRELGQEYYRIRREVFFKLIFQI 516
GC+GW * G*+*+E HYVDAKGQGS+AEWRELGQE IR EVF KL+F++
Sbjct: 182 GCYGWG*KG*L*DERHYVDAKGQGSHAEWRELGQECL*IRGEVFIKLVFKV 334
Score = 132 bits (282), Expect(2) = 8e-044
Identities = 50/59 (84%), Positives = 53/59 (89%)
Frame = -2 / -2
Query: 361 DAPFHLVPRYQAFLILAHSDTQAPHALHIF*YGRLVCPVWYCRHWHTINNCFQCRVPSA 185
DAP HLV R+QAFLILAH DTQ+P+ALHIF*YGRLVCPVWYC HWHTIN CFQ RVPSA
Sbjct: 179 DAPSHLVSRHQAFLILAHPDTQSPYALHIF*YGRLVCPVWYCHHWHTINYCFQRRVPSA 3
Score = 118 bits (253), Expect(2) = 7e-040
Identities = 47/51 (92%), Positives = 48/51 (94%)
Frame = -3 / -3
Query: 336 VTKPFSSLRTRTPKPHMLSIYFDMVGWSAQCGIAAIGTPLTIASNVEFHPQ 184
VTKPFSSLRTRTP PHMLSIYFDMVGWSAQCGIA IGTPLT AS+VEFHPQ
Sbjct: 154 VTKPFSSLRTRTPNPHMLSIYFDMVGWSAQCGIATIGTPLTTASSVEFHPQ 2
Score = 66.1 bits (138), Expect(2) = 7e-040
Identities = 29/38 (76%), Positives = 30/38 (78%)
Frame = -1 / -1
Query: 509 KINLKNTSRRIL*YSWPSSLHSA*LPWPFAST*WHSSY 396
K NL NTS RI +S PSSLHSA LPWPFAST*W SSY
Sbjct: 327 KTNLMNTSPRIHKHSCPSSLHSAWLPWPFAST*WRSSY 214
Score = 66.1 bits (138), Expect(2) = 8e-044
Identities = 26/35 (74%), Positives = 30/35 (85%)
Frame = -3 / -3
Query: 510 KN*LKEYFAANSVIFLAELPPFCIAALAFCIHIVA 406
+N* EYFA NS FL+ELPPFC+A+LAFCIHIVA
Sbjct: 328 EN*FDEYFATNSQTFLSELPPFCMASLAFCIHIVA 224
Score = 62.5 bits (130), Expect(2) = 6e-021
Identities = 26/40 (65%), Positives = 26/40 (65%)
Frame = -1 / -1
Query: 359 CTFXXXXXXXXXXXPCALGHPSPTCSPYILIWSAGLPSVV 240
CTF PCA GHP P CSPYILIWSAGLPSVV
Sbjct: 177 CTFPPRLSSPSLSHPCAPGHPIPICSPYILIWSAGLPSVV 58
Score = 58.8 bits (122), Expect(2) = 6e-021
Identities = 27/34 (79%), Positives = 27/34 (79%)
Frame = -2 / -2
Query: 508 KLT*RILRGEFCNILGRAPSILHSCLGLLHPHSG 407
KL * ILR EF NIL RAPSILH LGLLHPHSG
Sbjct: 326 KLI**ILRHEFTNILVRAPSILHGFLGLLHPHSG 225
>gb|CW412590.1|CW412590 fsbb001f108e18k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f108e18, DNA
sequence
Length = 733
Score = 204 bits (441), Expect(3) = 1e-056
Identities = 75/126 (59%), Positives = 97/126 (76%)
Frame = +2 / -3
Query: 104 KERGLIVSWCPQLEVLAHKATGCFFTHCGWNSTLEAIVNGVPMAAIPHWADQPTISKYME 283
+ERGLIV+WCPQLEVLAH A GCF THCGWNST+E + GVPM A+P W+DQP +KY+E
Sbjct: 644 EERGLIVAWCPQLEVLAHPAVGCFVTHCGWNSTMEGLGIGVPMVAMPQWSDQPMNAKYIE 465
Query: 284 SMWGLGVRVRKDEKGLVTRDEVERCIKDVMDGDSKDKYRKSATMWMQKAKAAMQNGGSSA 463
+W +GVR R D +G++ +DEVERC++ VMDG+ +Y ++A W +KAK AM GGSS
Sbjct: 464 DVWRVGVRARPDMEGVIRKDEVERCVRQVMDGEKSKEYMENAMNWREKAKRAMSEGGSSD 285
Query: 464 KNITEF 481
+NI EF
Sbjct: 284 RNIIEF 267
Score = 89.5 bits (189), Expect(2) = 1e-022
Identities = 38/70 (54%), Positives = 43/70 (61%)
Frame = -3 / +1
Query: 327 PFSSLRTRTPKPHMLSIYFDMVGWSAQCGIAAIGTPLTIASNVEFHPQCVKKQPVALCAR 148
P S R TP H S+Y +GWS CG+A IGTP+ S VEF PQCV KQP A CA
Sbjct: 421 PSISGRALTPTLHTSSMYLAFIGWSDHCGMATIGTPMPNPSIVEFQPQCVTKQPTAGCAS 600
Query: 147 TSSWGHQETI 118
TSS GH T+
Sbjct: 601 TSSCGHHATM 630
Score = 37.3 bits (75), Expect(2) = 1e-022
Identities = 14/28 (50%), Positives = 20/28 (71%)
Frame = -3 / +1
Query: 489 FAANSVIFLAELPPFCIAALAFCIHIVA 406
F NS++FL+ELPP +A LAF + +A
Sbjct: 259 FPRNSIMFLSELPPSLMALLAFSLQFIA 342
Score = 29.9 bits (59), Expect(3) = 1e-056
Identities = 14/28 (50%), Positives = 15/28 (53%)
Frame = +2 / -3
Query: 26 NSGKPFIWVVRSNEEHKLSNELRDKCKE 109
NSGK F+ VVR E KL K KE
Sbjct: 731 NSGKAFLGVVRGPETSKLPKSFVSKVKE 648
Score = 25.4 bits (49), Expect(3) = 1e-056
Identities = 7/21 (33%), Positives = 16/21 (76%)
Frame = +1 / -2
Query: 454 ELGQEYYRIRREVFFKLIFQI 516
+ GQE+YR+ +++ +LI+ +
Sbjct: 294 QFGQEHYRVPWKIWVELIYMV 232
>gb|CW496055.1|CW496055 fsbb001f288b11k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f288b11, DNA
sequence
Length = 555
Score = 188 bits (404), Expect(2) = 1e-056
Identities = 69/115 (60%), Positives = 89/115 (77%)
Frame = +2 / -2
Query: 110 RGLIVSWCPQLEVLAHKATGCFFTHCGWNSTLEAIVNGVPMAAIPHWADQPTISKYMESM 289
RGL+VSWCPQLEVLAH A GCFFTHCGWNST+EA+ GVPM A+P W+DQ T +KY++ +
Sbjct: 359 RGLLVSWCPQLEVLAHPAVGCFFTHCGWNSTVEALSAGVPMVAMPDWSDQTTNAKYIQDV 180
Query: 290 WGLGVRVRKDEKGLVTRDEVERCIKDVMDGDSKDKYRKSATMWMQKAKAAMQNGG 454
W +GVRVR D +G+V +EVERC++DVM+G+ ++R A W KA+ AM GG
Sbjct: 179 WRVGVRVRPDARGVVRSEEVERCVRDVMEGEMGKEFRNRALDWSGKARKAMSEGG 15
Score = 106 bits (227), Expect = 2e-022
Identities = 52/111 (46%), Positives = 59/111 (53%)
Frame = -3 / +1
Query: 453 PPFCIAALAFCIHIVALFXXXXXXXXXXXXXXXXXXXXLVTKPFSSLRTRTPKPHMLSIY 274
PP +A LA + ALF L+T P +S RTRTP H +Y
Sbjct: 16 PPSLMAFLALPLQSKALFLNSLPISPSMTSRTHLSTSSLLTTPRASGRTRTPTRHTSWMY 195
Query: 273 FDMVGWSAQCGIAAIGTPLTIASNVEFHPQCVKKQPVALCARTSSWGHQET 121
V WS Q GIA +GTP AS VEF PQCVKKQP A CARTSS GH +T
Sbjct: 196 LAFVVWSDQSGIATMGTPALSASTVEFQPQCVKKQPTAGCARTSSCGHHDT 348
Score = 53.3 bits (110), Expect(2) = 1e-056
Identities = 20/36 (55%), Positives = 24/36 (66%)
Frame = +2 / -2
Query: 2 GELGNGLYNSGKPFIWVVRSNEEHKLSNELRDKCKE 109
GE+ GLY SGKPF+WVVR+ E KL DK +E
Sbjct: 473 GEIAEGLYGSGKPFLWVVRATETGKLPEGFADKARE 366
>gb|BZ340250.1|BZ340250 ic37f08.b1 WGS-SbicolorF (JM107 adapted methyl filtered) Sorghum
bicolor genomic clone ic37f08 5', DNA sequence
Length = 602
Score = 137 bits (294), Expect(3) = 1e-055
Identities = 47/70 (67%), Positives = 59/70 (84%)
Frame = +2 / -2
Query: 104 KERGLIVSWCPQLEVLAHKATGCFFTHCGWNSTLEAIVNGVPMAAIPHWADQPTISKYME 283
++RGL+VSWCPQLEVLAH+A GCF THCGWNST EA+V GVPM A+P W DQP ++Y+E
Sbjct: 469 RQRGLVVSWCPQLEVLAHRAVGCFLTHCGWNSTAEALVTGVPMVAVPQWTDQPMNAEYVE 290
Query: 284 SMWGLGVRVR 313
++W +GVR R
Sbjct: 289 AVWRVGVRAR 260
Score = 95.0 bits (201), Expect(3) = 4e-031
Identities = 37/67 (55%), Positives = 44/67 (65%)
Frame = -3 / +3
Query: 321 SSLRTRTPKPHMLSIYFDMVGWSAQCGIAAIGTPLTIASNVEFHPQCVKKQPVALCARTS 142
++ R RTP H S Y +GWS CG A +GTP+T AS VEF PQCV+K P A CA TS
Sbjct: 252 AAARARTPTRHTASTYSAFMGWSVHCGTATMGTPVTSASAVEFQPQCVRKHPTARCASTS 431
Query: 141 SWGHQET 121
S GH +T
Sbjct: 432 SCGHHDT 452
Score = 75.3 bits (158), Expect(3) = 1e-055
Identities = 31/54 (57%), Positives = 40/54 (74%)
Frame = +2 / -2
Query: 326 GLVTRDEVERCIKDVMDGDSKDKYRKSATMWMQKAKAAMQNGGSSAKNITEFAA 487
GLV R EV R I++VMDGD +YR +A +WM+KA+AA + GGSS +NI EF A
Sbjct: 244 GLVRRGEVARGIEEVMDGDRSAEYRSNADVWMEKARAASREGGSSDRNIAEFVA 83
Score = 45.5 bits (93), Expect(3) = 4e-031
Identities = 19/30 (63%), Positives = 22/30 (73%)
Frame = -3 / +3
Query: 492 YFAANSVIFLAELPPFCIAALAFCIHIVAL 403
Y A NS +FL+ELPP +AALAF IH AL
Sbjct: 78 YLATNSAMFLSELPPSLLAALAFSIHTSAL 167
Score = 43.7 bits (89), Expect(3) = 1e-055
Identities = 14/25 (56%), Positives = 22/25 (88%)
Frame = +2 / -2
Query: 5 ELGNGLYNSGKPFIWVVRSNEEHKL 79
E+ +GL ++G+PF+WVVR++E HKL
Sbjct: 589 EIAHGLLDAGRPFLWVVRASETHKL 515
Score = 33.1 bits (66), Expect(3) = 4e-031
Identities = 15/35 (42%), Positives = 17/35 (48%)
Frame = -2 / +2
Query: 430 GLLHPHSGXXXXXXXXXXXXXXLDAPFHLVPRYQA 326
GLLHPH G LDAP HL P ++A
Sbjct: 140 GLLHPHIGVAPVLGTPVAVHHFLDAPGHLAPPHEA 244
>gb|CD223127.1|CD223127 CCC1_26_D11.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_26_D11_A007 3', mRNA sequence
Length = 652
Score = 204 bits (441), Expect(2) = 2e-053
Identities = 75/126 (59%), Positives = 97/126 (76%)
Frame = +2 / +3
Query: 104 KERGLIVSWCPQLEVLAHKATGCFFTHCGWNSTLEAIVNGVPMAAIPHWADQPTISKYME 283
+ERGLIV+WCPQLEVLAH A GCF THCGWNST+E + GVPM A+P W+DQP +KY+E
Sbjct: 60 EERGLIVAWCPQLEVLAHPAVGCFVTHCGWNSTMEGLGIGVPMVAMPQWSDQPMNAKYIE 239
Query: 284 SMWGLGVRVRKDEKGLVTRDEVERCIKDVMDGDSKDKYRKSATMWMQKAKAAMQNGGSSA 463
+W +GVR R D +G++ +DEVERC++ VMDG+ +Y ++A W +KAK AM GGSS
Sbjct: 240 DVWRVGVRARPDMEGVIRKDEVERCVRQVMDGEKSKEYMENAMNWREKAKRAMSEGGSSD 419
Query: 464 KNITEF 481
+NI EF
Sbjct: 420 RNIIEF 437
Score = 89.5 bits (189), Expect(2) = 1e-022
Identities = 38/70 (54%), Positives = 43/70 (61%)
Frame = -3 / -1
Query: 327 PFSSLRTRTPKPHMLSIYFDMVGWSAQCGIAAIGTPLTIASNVEFHPQCVKKQPVALCAR 148
P S R TP H S+Y +GWS CG+A IGTP+ S VEF PQCV KQP A CA
Sbjct: 283 PSISGRALTPTLHTSSMYLAFIGWSDHCGMATIGTPMPNPSIVEFQPQCVTKQPTAGCAS 104
Query: 147 TSSWGHQETI 118
TSS GH T+
Sbjct: 103 TSSCGHHATM 74
Score = 37.3 bits (75), Expect(2) = 1e-022
Identities = 14/28 (50%), Positives = 20/28 (71%)
Frame = -3 / -1
Query: 489 FAANSVIFLAELPPFCIAALAFCIHIVA 406
F NS++FL+ELPP +A LAF + +A
Sbjct: 445 FPRNSIMFLSELPPSLMALLAFSLQFIA 362
Score = 25.4 bits (49), Expect(2) = 2e-053
Identities = 7/21 (33%), Positives = 16/21 (76%)
Frame = +1 / +2
Query: 454 ELGQEYYRIRREVFFKLIFQI 516
+ GQE+YR+ +++ +LI+ +
Sbjct: 410 QFGQEHYRVPWKIWVELIYMV 472
>gb|CW472599.1|CW472599 fsbb001f227j19k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f227j19, DNA
sequence
Length = 436
Score = 203 bits (437), Expect = 3e-051
Identities = 73/125 (58%), Positives = 97/125 (77%)
Frame = +2 / +3
Query: 5 ELGNGLYNSGKPFIWVVRSNEEHKLSNELRDKCKERGLIVSWCPQLEVLAHKATGCFFTH 184
E+ GLY+SGKPF+WVVR++E K+ ++ DK ERGL+ +W QLEVLAH A GCF TH
Sbjct: 57 EVAEGLYSSGKPFLWVVRASETSKIPDKFADKANERGLVATWSAQLEVLAHPAVGCFVTH 236
Query: 185 CGWNSTLEAIVNGVPMAAIPHWADQPTISKYMESMWGLGVRVRKDEKGLVTRDEVERCIK 364
CGWNST E + GVPM A+P W+DQP +KY+E +W +GVRVR D+ G+V ++EVERC++
Sbjct: 237 CGWNSTTEGLSAGVPMVAMPQWSDQPVNAKYIEDVWRVGVRVRPDKDGVVRKEEVERCVR 416
Query: 365 DVMDG 379
+VMDG
Sbjct: 417 EVMDG 431
>gb|CB926451.1|CB926451 ABA1_9_A08.b1_A012 Abscisic acid-treated seedlings Sorghum bicolor
cDNA clone ABA1_9_A08_A012 3', mRNA sequence
Length = 568
Score = 199 bits (430), Expect = 2e-050
Identities = 74/133 (55%), Positives = 98/133 (73%)
Frame = +2 / +2
Query: 83 NELRDKCKERGLIVSWCPQLEVLAHKATGCFFTHCGWNSTLEAIVNGVPMAAIPHWADQP 262
++ DK ERGL+ +W QLEVLAH A GCF THCGWNST E + GVPM A+P W+DQP
Sbjct: 2 DKFADKANERGLVATWSAQLEVLAHPAVGCFVTHCGWNSTTEGLSAGVPMVAMPQWSDQP 181
Query: 263 TISKYMESMWGLGVRVRKDEKGLVTRDEVERCIKDVMDGDSKDKYRKSATMWMQKAKAAM 442
+KY+E +W +GVRVR D+ G+V ++EVERC+++VMDGD +Y+++A W +KA+ AM
Sbjct: 182 VNAKYIEDVWRVGVRVRPDKDGVVRKEEVERCVREVMDGDRSMEYQQNAAEWKEKARKAM 361
Query: 443 QNGGSSAKNITEF 481
GGSS NI EF
Sbjct: 362 SAGGSSDNNIKEF 400
>gb|CW785094.1|CW785094 SP__Ba0007P10.f SP__Ba Sorghum propinquum genomic clone
SP__Ba0007P10 5', DNA sequence
Length = 878
Score = 195 bits (420), Expect = 6e-049
Identities = 72/125 (57%), Positives = 94/125 (75%)
Frame = +2 / +1
Query: 107 ERGLIVSWCPQLEVLAHKATGCFFTHCGWNSTLEAIVNGVPMAAIPHWADQPTISKYMES 286
ERGLIV+W PQLEVLAH A GCF THCGWNST+E + GVPM A+P W+DQP +KY+E
Sbjct: 37 ERGLIVAWSPQLEVLAHPAVGCFVTHCGWNSTMEGLGIGVPMVAMPQWSDQPMNAKYIED 216
Query: 287 MWGLGVRVRKDEKGLVTRDEVERCIKDVMDGDSKDKYRKSATMWMQKAKAAMQNGGSSAK 466
+W +GVR R D +G++ +DEVERC++ VMD ++ +Y ++A W +K K AM GGSS +
Sbjct: 217 VWRVGVRARSDMEGVIRKDEVERCVRQVMDEENSKEYMENAMNWREKTKRAMSEGGSSDR 396
Query: 467 NITEF 481
NI EF
Sbjct: 397 NIIEF 411
Score = 108 bits (230), Expect = 8e-023
Identities = 49/121 (40%), Positives = 61/121 (50%)
Frame = -3 / -1
Query: 480 NSVIFLAELPPFCIAALAFCIHIVALFXXXXXXXXXXXXXXXXXXXXLVTKPFSSLRTRT 301
NS++FL+ELPP +A L F + +A + P S R T
Sbjct: 410 NSIMFLSELPPSLMALLVFSLQFIAFSMYSLLFSSSITCLTHLSTSSFLITPSISDRALT 231
Query: 300 PKPHMLSIYFDMVGWSAQCGIAAIGTPLTIASNVEFHPQCVKKQPVALCARTSSWGHQET 121
P H S+Y +GWS CG+A IGTP+ S VEF PQCV KQP A CA TSS G T
Sbjct: 230 PTLHTSSMYLAFIGWSDHCGMATIGTPMPNPSIVEFQPQCVTKQPTAGCASTSSCGLHAT 51
Query: 120 I 118
+
Sbjct: 50 M 48
>gb|CW208733.1|CW208733 104_638_11188843_148_36982_074 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11188843, DNA
sequence
Length = 663
Score = 161 bits (346), Expect(2) = 1e-048
Identities = 58/87 (66%), Positives = 73/87 (83%)
Frame = +2 / -1
Query: 110 RGLIVSWCPQLEVLAHKATGCFFTHCGWNSTLEAIVNGVPMAAIPHWADQPTISKYMESM 289
RGL+VSWCPQLEVLAH A GCFFTHCGWNST+EA+ GVPM A+P W+DQ T +KY++ +
Sbjct: 261 RGLLVSWCPQLEVLAHPAVGCFFTHCGWNSTVEALSAGVPMVAMPDWSDQTTNAKYIQDV 82
Query: 290 WGLGVRVRKDEKGLVTRDEVERCIKDV 370
W +GVRVR D +G+V +EVERC++DV
Sbjct: 81 WRVGVRVRPDARGVVRSEEVERCVRDV 1
Score = 53.3 bits (110), Expect(2) = 1e-048
Identities = 20/36 (55%), Positives = 24/36 (66%)
Frame = +2 / -1
Query: 2 GELGNGLYNSGKPFIWVVRSNEEHKLSNELRDKCKE 109
GE+ GLY SGKPF+WVVR+ E KL DK +E
Sbjct: 375 GEIAEGLYGSGKPFLWVVRATETGKLPEGFADKARE 268
>gb|CW313572.1|CW313572 104_803_11471355_116_35786_002 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11471355, DNA
sequence
Length = 692
Score = 194 bits (418), Expect = 1e-048
Identities = 73/124 (58%), Positives = 94/124 (75%)
Frame = +2 / -1
Query: 110 RGLIVSWCPQLEVLAHKATGCFFTHCGWNSTLEAIVNGVPMAAIPHWADQPTISKYMESM 289
RGL+VSWCPQLEVLAH A GCFFTHCGWNST+EA+ GVPM A+P W+DQ T +KY++ +
Sbjct: 617 RGLLVSWCPQLEVLAHPAVGCFFTHCGWNSTVEALSAGVPMVAMPDWSDQTTNAKYIQDV 438
Query: 290 WGLGVRVRKDEKGLVTRDEVERCIKDVMDGDSKDKYRKSATMWMQKAKAAMQNGGSSAKN 469
W +GVRVR D +G+V +EVERC++DVM+G+ ++R A W KA+ AM GGSS
Sbjct: 437 WRVGVRVRPDARGVVRSEEVERCVRDVMEGEMGKEFRNRALDWSGKARKAMSEGGSSDVA 258
Query: 470 ITEF 481
I +F
Sbjct: 257 IADF 246
Score = 112 bits (239), Expect = 4e-024
Identities = 55/119 (46%), Positives = 64/119 (53%)
Frame = -3 / +1
Query: 477 SVIFLAELPPFCIAALAFCIHIVALFXXXXXXXXXXXXXXXXXXXXLVTKPFSSLRTRTP 298
S + +ELPP +A LA + ALF L+T P +S RTRTP
Sbjct: 250 SAMATSELPPSLMAFLALPLQSKALFLNSLPISPSMTSRTHLSTSSLLTTPRASGRTRTP 429
Query: 297 KPHMLSIYFDMVGWSAQCGIAAIGTPLTIASNVEFHPQCVKKQPVALCARTSSWGHQET 121
H +Y V WS Q GIA +GTP AS VEF PQCVKKQP A CARTSS GH +T
Sbjct: 430 TRHTSWMYLAFVVWSDQSGIATMGTPALSASTVEFQPQCVKKQPTAGCARTSSCGHHDT 606
>gb|CD212039.1|CD212039 HS1_68_G01.b1_A012 Heat-shocked seedlings Sorghum bicolor cDNA
clone HS1_68_G01_A012 3', mRNA sequence
Length = 562
Score = 193 bits (416), Expect = 2e-048
Identities = 72/128 (56%), Positives = 94/128 (73%)
Frame = +2 / +1
Query: 98 KCKERGLIVSWCPQLEVLAHKATGCFFTHCGWNSTLEAIVNGVPMAAIPHWADQPTISKY 277
K ERGL+ +W QLEVLAH A GCF THCGWNST E + GVPM A+P W+DQP +KY
Sbjct: 1 KANERGLVATWSAQLEVLAHPAVGCFVTHCGWNSTTEGLSAGVPMVAMPQWSDQPVNAKY 180
Query: 278 MESMWGLGVRVRKDEKGLVTRDEVERCIKDVMDGDSKDKYRKSATMWMQKAKAAMQNGGS 457
+E +W +GVRVR + G+V ++EVERC+++VMDGD +Y+++A W +KA+ AM GGS
Sbjct: 181 IEDVWRVGVRVRPGKDGVVRKEEVERCVREVMDGDRSMEYQQNAAEWKEKARKAMSAGGS 360
Query: 458 SAKNITEF 481
S NI EF
Sbjct: 361 SDNNIKEF 384
>gb|BE599295.1|BE599295 PI1_87_G04.g1_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 614
Score = 137 bits (294), Expect(2) = 4e-048
Identities = 47/70 (67%), Positives = 59/70 (84%)
Frame = +2 / +3
Query: 104 KERGLIVSWCPQLEVLAHKATGCFFTHCGWNSTLEAIVNGVPMAAIPHWADQPTISKYME 283
++RGL+VSWCPQLEVLAH+A GCF THCGWNST EA+V GVPM A+P W DQP ++Y+E
Sbjct: 75 RQRGLVVSWCPQLEVLAHRAVGCFLTHCGWNSTAEALVTGVPMVAVPQWTDQPMNAEYVE 254
Query: 284 SMWGLGVRVR 313
++W +GVR R
Sbjct: 255 AVWRVGVRAR 284
Score = 95.0 bits (201), Expect(3) = 3e-031
Identities = 37/67 (55%), Positives = 44/67 (65%)
Frame = -3 / -2
Query: 321 SSLRTRTPKPHMLSIYFDMVGWSAQCGIAAIGTPLTIASNVEFHPQCVKKQPVALCARTS 142
++ R RTP H S Y +GWS CG A +GTP+T AS VEF PQCV+K P A CA TS
Sbjct: 292 AAARARTPTRHTASTYSAFMGWSVHCGTATMGTPVTSASAVEFQPQCVRKHPTARCASTS 113
Query: 141 SWGHQET 121
S GH +T
Sbjct: 112 SCGHHDT 92
Score = 75.3 bits (158), Expect(2) = 4e-048
Identities = 31/54 (57%), Positives = 40/54 (74%)
Frame = +2 / +3
Query: 326 GLVTRDEVERCIKDVMDGDSKDKYRKSATMWMQKAKAAMQNGGSSAKNITEFAA 487
GLV R EV R I++VMDGD +YR +A +WM+KA+AA + GGSS +NI EF A
Sbjct: 300 GLVRRGEVARGIEEVMDGDRSAEYRSNADVWMEKARAASREGGSSDRNIAEFVA 461
Score = 45.5 bits (93), Expect(3) = 3e-031
Identities = 19/30 (63%), Positives = 22/30 (73%)
Frame = -3 / -2
Query: 492 YFAANSVIFLAELPPFCIAALAFCIHIVAL 403
Y A NS +FL+ELPP +AALAF IH AL
Sbjct: 466 YLATNSAMFLSELPPSLLAALAFSIHTSAL 377
Score = 33.1 bits (66), Expect(3) = 3e-031
Identities = 15/35 (42%), Positives = 17/35 (48%)
Frame = -2 / -1
Query: 430 GLLHPHSGXXXXXXXXXXXXXXLDAPFHLVPRYQA 326
GLLHPH G LDAP HL P ++A
Sbjct: 404 GLLHPHIGVAPVLGTPVAVHHFLDAPGHLAPPHEA 300
>gb|CW239896.1|CW239896 104_698_11217909_116_37504_089 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11217909, DNA
sequence
Length = 692
Score = 192 bits (413), Expect = 5e-048
Identities = 72/124 (58%), Positives = 93/124 (75%)
Frame = +2 / -1
Query: 110 RGLIVSWCPQLEVLAHKATGCFFTHCGWNSTLEAIVNGVPMAAIPHWADQPTISKYMESM 289
RGL+VSWCPQLE LAH A GCFFTHCGWNST+EA+ GVPM A+P W+DQ T +KY++ +
Sbjct: 650 RGLLVSWCPQLEFLAHPAVGCFFTHCGWNSTVEALSAGVPMVAMPDWSDQTTNAKYIQDV 471
Query: 290 WGLGVRVRKDEKGLVTRDEVERCIKDVMDGDSKDKYRKSATMWMQKAKAAMQNGGSSAKN 469
W +GVRVR D +G+V +EVERC++DVM+G+ ++R A W KA+ AM GGSS
Sbjct: 470 WRVGVRVRPDARGVVRSEEVERCVRDVMEGEMGKEFRNRALDWSGKARKAMSEGGSSDVA 291
Query: 470 ITEF 481
I +F
Sbjct: 290 IADF 279
Score = 110 bits (234), Expect = 2e-023
Identities = 54/119 (45%), Positives = 63/119 (52%)
Frame = -3 / +1
Query: 477 SVIFLAELPPFCIAALAFCIHIVALFXXXXXXXXXXXXXXXXXXXXLVTKPFSSLRTRTP 298
S + +ELPP +A LA + ALF L+T P +S RTRTP
Sbjct: 283 SAMATSELPPSLMAFLALPLQSKALFLNSLPISPSMTSRTHLSTSSLLTTPRASGRTRTP 462
Query: 297 KPHMLSIYFDMVGWSAQCGIAAIGTPLTIASNVEFHPQCVKKQPVALCARTSSWGHQET 121
H +Y V WS Q GIA +GTP AS VEF PQCVKKQP A CAR SS GH +T
Sbjct: 463 TRHTSWMYLAFVVWSDQSGIATMGTPALSASTVEFQPQCVKKQPTAGCARNSSCGHHDT 639
>gb|CW500380.1|CW500380 fsbb001f295k23k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f295k23, DNA
sequence
Length = 503
Score = 124 bits (265), Expect(3) = 2e-047
Identities = 46/77 (59%), Positives = 56/77 (72%)
Frame = +2 / -1
Query: 5 ELGNGLYNSGKPFIWVVRSNEEHKLSNELRDKCKERGLIVSWCPQLEVLAHKATGCFFTH 184
++ GLYN+GK F WVVR++E KL D KERGL+V+W PQLEV+AH A GCF TH
Sbjct: 473 QMAEGLYNTGKAFPWVVRASESSKLPENFTDMAKERGLVVTWSPQLEVVAHPAVGCFVTH 294
Query: 185 CGWNSTLEAIVNGVPMA 235
CGWNST+E + GVP A
Sbjct: 293 CGWNSTMEGLGAGVPCA 243
Score = 72.1 bits (151), Expect(3) = 2e-047
Identities = 25/53 (47%), Positives = 41/53 (77%)
Frame = +2 / -2
Query: 224 VPMAAIPHWADQPTISKYMESMWGLGVRVRKDEKGLVTRDEVERCIKDVMDGD 382
VPM A+P W+DQ +KY+E +W +GVRVR DE G+V + E+E+ +++V++G+
Sbjct: 247 VPMVAMPQWSDQSMNAKYIEDVWRVGVRVRLDEDGVVRKKELEKRVREVVEGE 89
Score = 32.7 bits (65), Expect(3) = 2e-047
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = +2 / -3
Query: 395 YRKSATMWMQKAKAAMQNGGSSAK 466
Y ++A W +KAK AM GGSS K
Sbjct: 72 YIRNAAGWKEKAKRAMSEGGSSDK 1
>gb|CW395484.1|CW395484 fsbb001f083i14k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f083i14, DNA
sequence
Length = 691
Score = 166 bits (358), Expect(2) = 3e-045
Identities = 63/95 (66%), Positives = 77/95 (81%)
Frame = +2 / -3
Query: 56 RSNEEHKLSNELRDKCKERGLIVSWCPQLEVLAHKATGCFFTHCGWNSTLEAIVNGVPMA 235
RS E K S +L ++C+E+GLIVSWCPQL+VL+HKATGCF THCGWNST EAIV GVPM
Sbjct: 287 RSGEAQKPSQDLGERCREKGLIVSWCPQLDVLSHKATGCFITHCGWNSTTEAIVAGVPMV 108
Query: 236 AIPHWADQPTISKYMESMWGLGVRVRKDEKGLVTR 340
+P ADQPT +KY+ES W +G+R++ DEKGLV R
Sbjct: 107 GLPRSADQPTAAKYVESAWRIGLRMQLDEKGLVRR 3
Score = 115 bits (246), Expect(2) = 1e-029
Identities = 52/93 (55%), Positives = 58/93 (62%)
Frame = -3 / +1
Query: 336 VTKPFSSLRTRTPKPHMLSIYFDMVGWSAQCGIAAIGTPLTIASNVEFHPQCVKKQPVAL 157
+TKPFSS R P H LS YF VGWSA G +GTP TIAS VEFHPQCV KQPVAL
Sbjct: 7 LTKPFSSSCIRRPILHALSTYFAAVGWSADRGKPTMGTPATIASVVEFHPQCVMKQPVAL 186
Query: 156 CARTSSWGHQETIXXXXXXXXXXXLDNLCSSFD 58
C +TSS GHQ+T+ D C+S D
Sbjct: 187 CDKTSS*GHQDTMRPFSLHLSPRSWDGFCASPD 285
Score = 36.3 bits (73), Expect(2) = 3e-045
Identities = 13/17 (76%), Positives = 16/17 (94%)
Frame = +2 / -2
Query: 5 ELGNGLYNSGKPFIWVV 55
ELG+GL +SG+PFIWVV
Sbjct: 339 ELGSGLCDSGRPFIWVV 289
Score = 35.0 bits (70), Expect(2) = 1e-029
Identities = 13/18 (72%), Positives = 16/18 (88%)
Frame = -3 / +2
Query: 57 LTTQMNGLPELYNPLPSS 4
+TTQM GLPE ++PLPSS
Sbjct: 287 VTTQMKGLPESHSPLPSS 340
>gb|BG052249.1|BG052249 RHIZ2_12_A12.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 527
Score = 176 bits (378), Expect = 4e-043
Identities = 66/93 (70%), Positives = 79/93 (84%)
Frame = +2 / +3
Query: 5 ELGNGLYNSGKPFIWVVRSNEEHKLSNELRDKCKERGLIVSWCPQLEVLAHKATGCFFTH 184
ELG+GL +SG+PFIWVVRS E KLS +L ++C+E+GLIVSWCPQL+VL+HKATGCF TH
Sbjct: 138 ELGSGLCDSGRPFIWVVRSGEAQKLSQDLGERCREKGLIVSWCPQLDVLSHKATGCFITH 317
Query: 185 CGWNSTLEAIVNGVPMAAIPHWADQPTISKYME 283
CGWNST EAIV GVPM +P ADQPT +KY+E
Sbjct: 318 CGWNSTTEAIVAGVPMVGLPRSADQPTAAKYVE 416
Score = 132 bits (282), Expect = 5e-030
Identities = 56/94 (59%), Positives = 65/94 (69%)
Frame = -3 / -2
Query: 285 LSIYFDMVGWSAQCGIAAIGTPLTIASNVEFHPQCVKKQPVALCARTSSWGHQETIXXXX 106
+S YF VGWSA G +GTP TIAS VEFHPQCV KQPVALC +TSS GHQ+T+
Sbjct: 418 ISTYFAAVGWSADLGKPTMGTPATIASVVEFHPQCVMKQPVALCDKTSS*GHQDTMRPFS 239
Query: 105 XXXXXXXLDNLCSSFDLTTQMNGLPELYNPLPSS 4
D+ C+S DLTTQM GLPE ++PLPSS
Sbjct: 238 LHLSPRSWDSFCASPDLTTQMKGLPESHSPLPSS 137
>gb|CW239897.1|CW239897 104_698_11217909_148_37505_089 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11217909, DNA
sequence
Length = 565
Score = 141 bits (303), Expect(2) = 8e-043
Identities = 51/75 (68%), Positives = 63/75 (84%)
Frame = +2 / +2
Query: 110 RGLIVSWCPQLEVLAHKATGCFFTHCGWNSTLEAIVNGVPMAAIPHWADQPTISKYMESM 289
RGL+VSWCPQLEVLAH A GCFFTHCGWNST+EA+ GVPM A+P W+DQ T +KY++ +
Sbjct: 338 RGLLVSWCPQLEVLAHPAVGCFFTHCGWNSTVEALSAGVPMVAMPDWSDQTTNAKYIQDV 517
Query: 290 WGLGVRVRKDEKGLV 334
W +GVRVR D +G+V
Sbjct: 518 WRVGVRVRPDARGVV 562
Score = 53.3 bits (110), Expect(2) = 8e-043
Identities = 20/36 (55%), Positives = 24/36 (66%)
Frame = +2 / +2
Query: 2 GELGNGLYNSGKPFIWVVRSNEEHKLSNELRDKCKE 109
GE+ GLY SGKPF+WVVR+ E KL DK +E
Sbjct: 224 GEIAEGLYGSGKPFLWVVRATETGKLPEGFADKARE 331
>gb|CW232538.1|CW232538 104_685_11212872_148_37363_092 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11212872, DNA
sequence
Length = 572
Score = 133 bits (284), Expect(2) = 1e-038
Identities = 50/82 (60%), Positives = 63/82 (76%)
Frame = +2 / +2
Query: 104 KERGLIVSWCPQLEVLAHKATGCFFTHCGWNSTLEAIVNGVPMAAIPHWADQPTISKYME 283
+ERGLIV+W QLEVLAH A GCF THCGWNST+E + GVPM A+P W+DQ +KY+E
Sbjct: 326 EERGLIVAWSSQLEVLAHPAVGCFVTHCGWNSTMEGLGIGVPMVAMPQWSDQLINAKYIE 505
Query: 284 SMWGLGVRVRKDEKGLVTRDEV 349
+W +GVR R D +G+V +DEV
Sbjct: 506 DVWRVGVRARPDVEGVVIKDEV 571
Score = 48.3 bits (99), Expect(2) = 1e-038
Identities = 19/35 (54%), Positives = 22/35 (62%)
Frame = +2 / +2
Query: 5 ELGNGLYNSGKPFIWVVRSNEEHKLSNELRDKCKE 109
E+ GLYNSGK F+WVVR +E KL K KE
Sbjct: 218 EMAQGLYNSGKAFLWVVRGSETSKLPESFISKMKE 322
>gb|CL189680.1|CL189680 104_407_10905541_116_32481_061 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10905541, DNA
sequence
Length = 677
Score = 124 bits (265), Expect(2) = 2e-037
Identities = 46/77 (59%), Positives = 56/77 (72%)
Frame = +2 / -1
Query: 5 ELGNGLYNSGKPFIWVVRSNEEHKLSNELRDKCKERGLIVSWCPQLEVLAHKATGCFFTH 184
++ GLYN+GK F WVVR++E KL D KERGL+V+W PQLEV+AH A GCF TH
Sbjct: 329 QMAEGLYNTGKAFPWVVRASESSKLPENFTDMAKERGLVVTWSPQLEVVAHPAVGCFVTH 150
Query: 185 CGWNSTLEAIVNGVPMA 235
CGWNST+E + GVP A
Sbjct: 149 CGWNSTMEGLGAGVPCA 99
Score = 52.8 bits (109), Expect(2) = 2e-037
Identities = 19/33 (57%), Positives = 25/33 (75%)
Frame = +2 / -2
Query: 224 VPMAAIPHWADQPTISKYMESMWGLGVRVRKDE 322
VPM A+P W+DQ +KY+E +W +GVRVR DE
Sbjct: 103 VPMVAMPQWSDQSMNAKYIEDVWRVGVRVRLDE 5
>gb|CW313573.1|CW313573 104_803_11471355_148_35790_002 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11471355, DNA
sequence
Length = 650
Score = 120 bits (257), Expect(2) = 2e-036
Identities = 42/61 (68%), Positives = 51/61 (83%)
Frame = +2 / +1
Query: 110 RGLIVSWCPQLEVLAHKATGCFFTHCGWNSTLEAIVNGVPMAAIPHWADQPTISKYMESM 289
RGL+VSWCPQLEVLAH A GCFFTHCGWNST+EA+ GVPM A+P W+DQ T +Y++ +
Sbjct: 463 RGLLVSWCPQLEVLAHPAVGCFFTHCGWNSTVEALSAGVPMVAMPDWSDQTTKRQYIQDV 642
Query: 290 W 292
W
Sbjct: 643 W 645
Score = 53.3 bits (110), Expect(2) = 2e-036
Identities = 20/36 (55%), Positives = 24/36 (66%)
Frame = +2 / +1
Query: 2 GELGNGLYNSGKPFIWVVRSNEEHKLSNELRDKCKE 109
GE+ GLY SGKPF+WVVR+ E KL DK +E
Sbjct: 349 GEIAEGLYGSGKPFLWVVRATETGKLPEGFADKARE 456
>gb|BI643608.1|BI643608 DG1_91_A08.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 484
Score = 151 bits (325), Expect = 7e-036
Identities = 60/94 (63%), Positives = 77/94 (81%)
Frame = +2 / -2
Query: 206 EAIVNGVPMAAIPHWADQPTISKYMESMWGLGVRVRKDEKGLVTRDEVERCIKDVMDGDS 385
EAIV GVPM +P ADQPT +KY+ES W +G+R++ DEKGLV R+EVERCI++VM+G+
Sbjct: 483 EAIVAGVPMVGLPRSADQPTAAKYVESAWRIGLRMQLDEKGLVRREEVERCIREVMEGER 304
Query: 386 KDKYRKSATMWMQKAKAAMQNGGSSAKNITEFAA 487
KD++R++A WM+KAK AMQ GGSS KNI EFAA
Sbjct: 303 KDEFRQNAARWMKKAKEAMQEGGSSDKNIAEFAA 202
Score = 102 bits (217), Expect = 5e-021
Identities = 48/97 (49%), Positives = 55/97 (56%)
Frame = -3 / +2
Query: 495 EYFAANSVIFLAELPPFCIAALAFCIHIVALFXXXXXXXXXXXXXXXXXXXXLVTKPFSS 316
+YFAANS +FL+ELPP CIA+LAF IH+ A L+TKPFSS
Sbjct: 194 KYFAANSAMFLSELPPSCIASLAFFIHLAAFCLNSSFLSPSITSRMHLSTSSLLTKPFSS 373
Query: 315 LRTRTPKPHMLSIYFDMVGWSAQCGIAAIGTPLTIAS 205
R P H LS YF VGWSA G +GTP TIAS
Sbjct: 374 SCIRRPILHALSTYFAAVGWSADRGKPTMGTPATIAS 484
>gb|CW404738.1|CW404738 fsbb001f097a06f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f097a06, DNA
sequence
Length = 603
Score = 149 bits (321), Expect = 3e-035
Identities = 54/91 (59%), Positives = 68/91 (74%)
Frame = +2 / +2
Query: 5 ELGNGLYNSGKPFIWVVRSNEEHKLSNELRDKCKERGLIVSWCPQLEVLAHKATGCFFTH 184
E+ GLY+SGKPF+WVVR++E K+ ++ DK ERGL+ +W QLEVLAH A GCF TH
Sbjct: 329 EVAEGLYSSGKPFLWVVRASETSKIPDKFADKANERGLVATWSAQLEVLAHPAVGCFVTH 508
Query: 185 CGWNSTLEAIVNGVPMAAIPHWADQPTISKY 277
CGWNST E + GVPM A+P W+DQP +KY
Sbjct: 509 CGWNSTTEGLSAGVPMVAMPQWSDQPVNAKY 601
>gb|CW269433.1|CW269433 104_740_11401840_148_35315_054 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11401840, DNA
sequence
Length = 617
Score = 114 bits (244), Expect(3) = 9e-035
Identities = 41/68 (60%), Positives = 50/68 (73%)
Frame = +2 / +1
Query: 116 LIVSWCPQLEVLAHKATGCFFTHCGWNSTLEAIVNGVPMAAIPHWADQPTISKYMESMWG 295
++V WCPQL+VLAH A GCF THCGWNSTLEA+ GVPM A+ W DQPT ++ +E W
Sbjct: 346 MVVPWCPQLDVLAHPAVGCFVTHCGWNSTLEALSYGVPMVAMALWTDQPTNARNVELAWR 525
Query: 296 LGVRVRKD 319
G R R+D
Sbjct: 526 AGARARRD 549
Score = 47.8 bits (98), Expect(3) = 9e-035
Identities = 17/37 (45%), Positives = 25/37 (67%)
Frame = +2 / +1
Query: 5 ELGNGLYNSGKPFIWVVRSNEEHKLSNELRDKCKERG 115
EL GL +GKPF+WVVR+ +EH++ + L D+ G
Sbjct: 229 ELARGLLAAGKPFLWVVRATDEHQIPHHLLDEATASG 339
Score = 23.5 bits (45), Expect(3) = 9e-035
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = +2 / +1
Query: 326 GLVTRDEVERCIKDV 370
G+ R EVERC++ V
Sbjct: 571 GMFLRGEVERCVRAV 615
>gb|CL187366.1|CL187366 104_402_10900827_116_32436_002 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10900827, DNA
sequence
Length = 722
Score = 108 bits (231), Expect(3) = 1e-034
Identities = 42/87 (48%), Positives = 54/87 (62%)
Frame = +2 / -2
Query: 59 SNEEHKLSNELRDKCKERGLIVSWCPQLEVLAHKATGCFFTHCGWNSTLEAIVNGVPMAA 238
S E L KERG++ SWCPQ VL+H + G F THCGWNSTLE+I GVPM
Sbjct: 550 SGENAMLPEGFVTDTKERGILASWCPQELVLSHPSVGLFLTHCGWNSTLESICAGVPMLC 371
Query: 239 IPHWADQPTISKYMESMWGLGVRVRKD 319
P +A+QPT +Y+ WG+G+ + D
Sbjct: 370 WPFFAEQPTNCRYVCDKWGIGMEIDSD 290
Score = 49.6 bits (102), Expect(3) = 1e-034
Identities = 19/47 (40%), Positives = 29/47 (61%)
Frame = +2 / -2
Query: 332 VTRDEVERCIKDVMDGDSKDKYRKSATMWMQKAKAAMQNGGSSAKNI 472
V R EV R +++ MDG+ R + +W +KA+ A+ GGSS KN+
Sbjct: 289 VRRQEVARLVREAMDGERGKAMRLKSMVWKEKARQAVDEGGSSRKNM 149
Score = 27.2 bits (53), Expect(3) = 1e-034
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = +2 / -2
Query: 5 ELGNGLYNSGKPFIWVVR 58
E GL + G PF+WV+R
Sbjct: 616 EFAWGLASCGSPFLWVIR 563
>gb|BE126076.1|BE126076 DG1_65_E03.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 680
Score = 138 bits (295), Expect(2) = 1e-034
Identities = 50/95 (52%), Positives = 66/95 (69%)
Frame = +2 / +1
Query: 104 KERGLIVSWCPQLEVLAHKATGCFFTHCGWNSTLEAIVNGVPMAAIPHWADQPTISKYME 283
K G++V WC Q VLAH + GCF THCGWNSTLEA+V+GVPM A+P W+DQP + +E
Sbjct: 154 KAAGMVVEWCDQQRVLAHPSVGCFVTHCGWNSTLEAVVSGVPMVAVPSWSDQPVNAWLVE 333
Query: 284 SMWGLGVRVRKDEKGLVTRDEVERCIKDVMDGDSK 388
W +GVR +D +G +TR E+ RC++ VM K
Sbjct: 334 EGWQVGVRAERDGEGTLTRGELARCVELVMGAGDK 438
Score = 29.5 bits (58), Expect(2) = 1e-034
Identities = 10/18 (55%), Positives = 15/18 (83%)
Frame = +2 / +1
Query: 5 ELGNGLYNSGKPFIWVVR 58
E+ +GL SG+P++WVVR
Sbjct: 40 EVLHGLQASGRPYLWVVR 93
>gb|BE362888.2|BE362888 DG1_90_B11.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 682
Score = 138 bits (295), Expect(2) = 1e-034
Identities = 50/95 (52%), Positives = 66/95 (69%)
Frame = +2 / +3
Query: 104 KERGLIVSWCPQLEVLAHKATGCFFTHCGWNSTLEAIVNGVPMAAIPHWADQPTISKYME 283
K G++V WC Q VLAH + GCF THCGWNSTLEA+V+GVPM A+P W+DQP + +E
Sbjct: 258 KAAGMVVEWCDQQRVLAHPSVGCFVTHCGWNSTLEAVVSGVPMVAVPSWSDQPVNAWLVE 437
Query: 284 SMWGLGVRVRKDEKGLVTRDEVERCIKDVMDGDSK 388
W +GVR +D +G +TR E+ RC++ VM K
Sbjct: 438 EGWQVGVRAERDGEGTLTRGELARCVELVMGAGDK 542
Score = 29.5 bits (58), Expect(2) = 1e-034
Identities = 10/18 (55%), Positives = 15/18 (83%)
Frame = +2 / +3
Query: 5 ELGNGLYNSGKPFIWVVR 58
E+ +GL SG+P++WVVR
Sbjct: 144 EVLHGLQASGRPYLWVVR 197
>gb|CX616980.1|CX616980 GABR1_31_B05.b1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_31_B05_A002 3', mRNA sequence
Length = 636
Score = 138 bits (295), Expect(2) = 1e-034
Identities = 50/95 (52%), Positives = 66/95 (69%)
Frame = +2 / +1
Query: 104 KERGLIVSWCPQLEVLAHKATGCFFTHCGWNSTLEAIVNGVPMAAIPHWADQPTISKYME 283
K G++V WC Q VLAH + GCF THCGWNSTLEA+V+GVPM A+P W+DQP + +E
Sbjct: 214 KAAGMVVEWCDQQRVLAHPSVGCFVTHCGWNSTLEAVVSGVPMVAVPSWSDQPVNAWLVE 393
Query: 284 SMWGLGVRVRKDEKGLVTRDEVERCIKDVMDGDSK 388
W +GVR +D +G +TR E+ RC++ VM K
Sbjct: 394 EGWQVGVRAERDGEGTLTRGELARCVELVMGAGDK 498
Score = 29.5 bits (58), Expect(2) = 1e-034
Identities = 10/18 (55%), Positives = 15/18 (83%)
Frame = +2 / +1
Query: 5 ELGNGLYNSGKPFIWVVR 58
E+ +GL SG+P++WVVR
Sbjct: 100 EVLHGLQASGRPYLWVVR 153
>gb|CW312128.1|CW312128 104_801_11470592_148_36283_018 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11470592, DNA
sequence
Length = 678
Score = 114 bits (244), Expect(3) = 2e-034
Identities = 41/68 (60%), Positives = 50/68 (73%)
Frame = +2 / -1
Query: 116 LIVSWCPQLEVLAHKATGCFFTHCGWNSTLEAIVNGVPMAAIPHWADQPTISKYMESMWG 295
++V WCPQL+VLAH A GCF THCGWNSTLEA+ GVPM A+ W DQPT ++ +E W
Sbjct: 657 MVVPWCPQLDVLAHPAVGCFVTHCGWNSTLEALSYGVPMVAMALWTDQPTNARNVELAWR 478
Query: 296 LGVRVRKD 319
G R R+D
Sbjct: 477 AGARARRD 454
Score = 41.4 bits (84), Expect(3) = 2e-034
Identities = 16/36 (44%), Positives = 22/36 (61%)
Frame = +2 / -1
Query: 374 DGDSKDKYRKSATMWMQKAKAAMQNGGSSAKNITEF 481
DG+ RK+ W KA+AA+ GGSS +N+ EF
Sbjct: 381 DGEEASAVRKAVGTWRDKARAAVAAGGSSDRNLDEF 274
Score = 28.6 bits (56), Expect(3) = 2e-034
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = +2 / -1
Query: 326 GLVTRDEVERCIKDVMD 376
G+ R EVERC++ VMD
Sbjct: 432 GMFLRGEVERCVRAVMD 382
>gb|CW072473.1|CW072473 104_325_10592285_116_30541 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10592285, DNA
sequence
Length = 697
Score = 113 bits (242), Expect(3) = 4e-034
Identities = 41/67 (61%), Positives = 49/67 (73%)
Frame = +2 / -1
Query: 119 IVSWCPQLEVLAHKATGCFFTHCGWNSTLEAIVNGVPMAAIPHWADQPTISKYMESMWGL 298
+V WCPQL+VLAH A GCF THCGWNSTLEA+ GVPM A+ W DQPT ++ +E W
Sbjct: 691 VVPWCPQLDVLAHPAVGCFVTHCGWNSTLEALSYGVPMVAMALWTDQPTNARNVELAWRA 512
Query: 299 GVRVRKD 319
G R R+D
Sbjct: 511 GARARRD 491
Score = 41.4 bits (84), Expect(3) = 4e-034
Identities = 16/36 (44%), Positives = 22/36 (61%)
Frame = +2 / -1
Query: 374 DGDSKDKYRKSATMWMQKAKAAMQNGGSSAKNITEF 481
DG+ RK+ W KA+AA+ GGSS +N+ EF
Sbjct: 418 DGEEASAVRKAVGTWRDKARAAVAAGGSSDRNLDEF 311
Score = 28.6 bits (56), Expect(3) = 4e-034
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = +2 / -1
Query: 326 GLVTRDEVERCIKDVMD 376
G+ R EVERC++ VMD
Sbjct: 469 GMFLRGEVERCVRAVMD 419
>gb|CW311011.1|CW311011 104_800_11470011_116_35753_010 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11470011, DNA
sequence
Length = 747
Score = 132 bits (283), Expect(2) = 4e-034
Identities = 53/55 (96%), Positives = 53/55 (96%)
Frame = +2 / -2
Query: 5 ELGNGLYNSGKPFIWVVRSNEEHKLSNELRDKCKERGLIVSWCPQLEVLAHKATG 169
ELGNGLYNSGKPFIWVVRSNEEHKLSNELR KCKERGLIVSWC QLEVLAHKATG
Sbjct: 284 ELGNGLYNSGKPFIWVVRSNEEHKLSNELRAKCKERGLIVSWCSQLEVLAHKATG 120
Score = 121 bits (258), Expect(2) = 1e-029
Identities = 49/55 (89%), Positives = 52/55 (94%)
Frame = -2 / +3
Query: 169 TCSFMC*NFQLGAPRNNKATFLALVTKFIGQLVFFV*PHNPNEWFARIVQSIAKL 5
TC FMC*NF+LGAPRN+KATFLAL TKFIGQ VFFV*PHNPNEWFARIVQSIA+L
Sbjct: 120 TCGFMC*NFELGAPRNDKATFLALGTKFIGQFVFFV*PHNPNEWFARIVQSIAQL 284
Score = 112 bits (239), Expect(2) = 4e-026
Identities = 49/55 (89%), Positives = 50/55 (90%)
Frame = +3 / -3
Query: 6 SLAMDCTILANHSFGL*GQTKNTSCPMNFVTSARNVALLFLGAPSWKF*HIKLQV 170
S AMDCTILANHSFGL*GQTKNT+CPMNFV SARNVAL FLGAPS KF*HIK QV
Sbjct: 283 SWAMDCTILANHSFGL*GQTKNTNCPMNFVPSARNVALSFLGAPSSKF*HIKPQV 119
Score = 108 bits (231), Expect(2) = 1e-025
Identities = 42/48 (87%), Positives = 43/48 (89%)
Frame = -1 / +2
Query: 149 ELPAGGTKKQ*GHVPCTCHEVHWTTCVLRLTSQPK*MVCQNCTIHCQA 6
EL AG TKK+*GHVPCT HEVHWT CVLRLTSQPK*MVCQNCTIHC A
Sbjct: 140 ELRAGSTKKR*GHVPCTWHEVHWTICVLRLTSQPK*MVCQNCTIHCPA 283
Score = 102 bits (217), Expect = 5e-021
Identities = 43/55 (78%), Positives = 43/55 (78%)
Frame = -3 / +1
Query: 168 PVALCARTSSWGHQETIXXXXXXXXXXXLDNLCSSFDLTTQMNGLPELYNPLPSS 4
PVALCARTSSW HQETI LDNLCSSFDLTTQMNGLPELYNPLPSS
Sbjct: 121 PVALCARTSSWEHQETIRPRSLHLARSSLDNLCSSFDLTTQMNGLPELYNPLPSS 285
Score = 33.1 bits (66), Expect(2) = 4e-034
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +2 / -3
Query: 167 GCFFTHCGW 193
GCFFTHCGW
Sbjct: 28 GCFFTHCGW 2
Score = 29.5 bits (58), Expect(2) = 1e-029
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = -2 / +2
Query: 193 PSAMCEETTC 164
PSAMCEETTC
Sbjct: 2 PSAMCEETTC 31
Score = 28.1 bits (55), Expect(2) = 1e-025
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = -3 / +3
Query: 192 HPQCVKKQP 166
HPQCVKKQP
Sbjct: 3 HPQCVKKQP 29
Score = 26.3 bits (51), Expect(2) = 4e-026
Identities = 10/11 (90%), Positives = 11/11 (100%)
Frame = +3 / -1
Query: 162 LQVVSSHIADG 194
+QVVSSHIADG
Sbjct: 33 MQVVSSHIADG 1
>gb|CW449893.1|CW449893 fsbb001f188e03k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f188e03, DNA
sequence
Length = 689
Score = 112 bits (240), Expect(2) = 2e-033
Identities = 38/68 (55%), Positives = 52/68 (76%)
Frame = +2 / -2
Query: 113 GLIVSWCPQLEVLAHKATGCFFTHCGWNSTLEAIVNGVPMAAIPHWADQPTISKYMESMW 292
G +V+WC Q VL+H A GCF THCGWNS +EA+ +GVP+ P WADQPT +K++E ++
Sbjct: 637 GKVVAWCDQARVLSHAAVGCFLTHCGWNSAVEALASGVPVVTYPAWADQPTNAKFLEDVY 458
Query: 293 GLGVRVRK 316
G+GVR+ K
Sbjct: 457 GVGVRLPK 434
Score = 51.0 bits (105), Expect(2) = 2e-033
Identities = 19/50 (38%), Positives = 29/50 (58%)
Frame = +2 / -2
Query: 332 VTRDEVERCIKDVMDGDSKDKYRKSATMWMQKAKAAMQNGGSSAKNITEF 481
+ RD + RC+++VM G R +A W +A AA+ GGSS + I +F
Sbjct: 430 IARDALRRCVEEVMSGPKAAAMRATAGKWKDEASAALATGGSSERGIQDF 281
>gb|CW071601.1|CW071601 104_323_10591591_114_30471 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10591591, DNA
sequence
Length = 697
Score = 128 bits (275), Expect(2) = 2e-033
Identities = 47/88 (53%), Positives = 64/88 (72%)
Frame = +2 / -2
Query: 110 RGLIVSWCPQLEVLAHKATGCFFTHCGWNSTLEAIVNGVPMAAIPHWADQPTISKYMESM 289
+G++V WC Q +VL+H A GCF THC W+STLE+I GVPM A+P WADQPT++ +E+
Sbjct: 531 QGMVVEWCNQTKVLSHGAVGCFVTHCRWDSTLESITGGVPMVAVPRWADQPTVAALVEAS 352
Query: 290 WGLGVRVRKDEKGLVTRDEVERCIKDVM 373
G+GVR D G+V R E+ RC++ VM
Sbjct: 351 AGVGVRAWVDGDGVVGRGELRRCVEMVM 268
Score = 34.5 bits (69), Expect(2) = 2e-033
Identities = 15/36 (41%), Positives = 20/36 (55%)
Frame = +2 / -2
Query: 380 DSKDKYRKSATMWMQKAKAAMQNGGSSAKNITEFAA 487
DS R A W Q+AK A GG+S +N+ FA+
Sbjct: 258 DSASAVRARAECWGQRAKEAAAVGGTSQRNLRAFAS 151
>gb|CW365974.1|CW365974 fsbb001f038m02k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f038m02, DNA
sequence
Length = 598
Score = 128 bits (275), Expect(2) = 2e-033
Identities = 47/88 (53%), Positives = 64/88 (72%)
Frame = +2 / -1
Query: 110 RGLIVSWCPQLEVLAHKATGCFFTHCGWNSTLEAIVNGVPMAAIPHWADQPTISKYMESM 289
+G++V WC Q +VL+H A GCF THC W+STLE+I GVPM A+P WADQPT++ +E+
Sbjct: 565 QGMVVEWCNQTKVLSHGAVGCFVTHCRWDSTLESITGGVPMVAVPRWADQPTVAALVEAS 386
Query: 290 WGLGVRVRKDEKGLVTRDEVERCIKDVM 373
G+GVR D G+V R E+ RC++ VM
Sbjct: 385 AGVGVRAWVDGDGVVGRGELRRCVEMVM 302
Score = 34.5 bits (69), Expect(2) = 2e-033
Identities = 15/36 (41%), Positives = 20/36 (55%)
Frame = +2 / -1
Query: 380 DSKDKYRKSATMWMQKAKAAMQNGGSSAKNITEFAA 487
DS R A W Q+AK A GG+S +N+ FA+
Sbjct: 292 DSASAVRARAECWGQRAKEAAAVGGTSQRNLRAFAS 185
>gb|CW312127.1|CW312127 104_801_11470592_116_36284_018 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11470592, DNA
sequence
Length = 643
Score = 114 bits (244), Expect(2) = 4e-033
Identities = 41/68 (60%), Positives = 50/68 (73%)
Frame = +2 / +2
Query: 116 LIVSWCPQLEVLAHKATGCFFTHCGWNSTLEAIVNGVPMAAIPHWADQPTISKYMESMWG 295
++V WCPQL+VLAH A GCF THCGWNSTLEA+ GVPM A+ W DQPT ++ +E W
Sbjct: 416 MVVPWCPQLDVLAHPAVGCFVTHCGWNSTLEALSYGVPMVAMALWTDQPTNARNVELAWR 595
Query: 296 LGVRVRKD 319
G R R+D
Sbjct: 596 AGARARRD 619
Score = 47.8 bits (98), Expect(2) = 4e-033
Identities = 17/37 (45%), Positives = 25/37 (67%)
Frame = +2 / +2
Query: 5 ELGNGLYNSGKPFIWVVRSNEEHKLSNELRDKCKERG 115
EL GL +GKPF+WVVR+ +EH++ + L D+ G
Sbjct: 299 ELARGLLAAGKPFLWVVRATDEHQIPHHLLDEATASG 409
>gb|AF503433.1| Sorghum bicolor BAC 170F8, complete sequence
Length = 142376
Score = 115 bits (245), Expect(3) = 2e-032
Identities = 39/100 (39%), Positives = 67/100 (67%)
Frame = +2 / +1
Query: 83 NELRDKCKERGLIVSWCPQLEVLAHKATGCFFTHCGWNSTLEAIVNGVPMAAIPHWADQP 262
N+ + +GLIV+W PQ VL+H + CF THCGWNST+EA+++GVP P++ADQ
Sbjct: 133192 NQFQQSVNGKGLIVTWAPQQRVLSHPSVACFMTHCGWNSTMEAVLHGVPFLCCPYFADQF 133371
Query: 263 TISKYMESMWGLGVRVRKDEKGLVTRDEVERCIKDVMDGD 382
Y+ ++W G+++ +E+G+VTR+E++ + ++ +
Sbjct: 133372 CNQSYVCNVWKTGLKLYSNEQGVVTREEIKEKVVQLLSDE 133491
Score = 112 bits (239), Expect(2) = 2e-024
Identities = 38/100 (38%), Positives = 63/100 (63%)
Frame = +2 / +1
Query: 83 NELRDKCKERGLIVSWCPQLEVLAHKATGCFFTHCGWNSTLEAIVNGVPMAAIPHWADQP 262
++ R + ++GL+V W PQ VL+H + CF +HCGWNST+E + +GVP P++ADQ
Sbjct: 130489 DQFRRRVGDKGLVVGWAPQQRVLSHPSVACFISHCGWNSTMEGVRHGVPFLCWPYFADQF 130668
Query: 263 TISKYMESMWGLGVRVRKDEKGLVTRDEVERCIKDVMDGD 382
Y+ WG G+R+ DE+G+ T++E+ + ++ D
Sbjct: 130669 MNQNYICDAWGTGLRIDADERGIFTKEEIRDKVDQLLGDD 130788
Score = 111 bits (237), Expect(2) = 3e-028
Identities = 40/86 (46%), Positives = 60/86 (69%)
Frame = +2 / +3
Query: 92 RDKCKERGLIVSWCPQLEVLAHKATGCFFTHCGWNSTLEAIVNGVPMAAIPHWADQPTIS 271
R + +GLIV W PQ VL+H + CF THCGWNST+EA+ +GVP+ P++ADQ
Sbjct: 127995 RRRVAGKGLIVGWAPQQRVLSHPSVACFVTHCGWNSTMEAVRHGVPLLCWPYFADQFFNQ 128174
Query: 272 KYMESMWGLGVRVRKDEKGLVTRDEV 349
Y+ +WG+G++V D +G+VT++E+
Sbjct: 128175 TYICDLWGVGLKVCADGRGIVTKEEI 128252
Score = 106 bits (227), Expect(2) = 3e-025
Identities = 39/78 (50%), Positives = 52/78 (66%)
Frame = +2 / +2
Query: 77 LSNELRDKCKERGLIVSWCPQLEVLAHKATGCFFTHCGWNSTLEAIVNGVPMAAIPHWAD 256
L +LR + RG +VSWCPQ VLAH A CF THCGWNST+EA+ +GVP+ P++ D
Sbjct: 123344 LLEQLRRRAAPRGRVVSWCPQQSVLAHPAVACFLTHCGWNSTMEAVRSGVPLLCWPYFTD 123523
Query: 257 QPTISKYMESMWGLGVRV 310
Q Y+ +WG G++V
Sbjct: 123524 QFLNQSYICDVWGTGLKV 123577
Score = 84.0 bits (177), Expect(2) = 6e-021
Identities = 31/80 (38%), Positives = 49/80 (61%)
Frame = +2 / +1
Query: 143 EVLAHKATGCFFTHCGWNSTLEAIVNGVPMAAIPHWADQPTISKYMESMWGLGVRVRKDE 322
+VLAH+A CF +HCGWNST+E + N VP P++ DQ Y+ ++W G+ V
Sbjct: 120478 QVLAHRAVACFVSHCGWNSTMEGVRNAVPFLCWPYFTDQFQNESYICNVWRTGLAVAPGP 120657
Query: 323 KGLVTRDEVERCIKDVMDGD 382
G+VT++E+ ++ V+ D
Sbjct: 120658 DGVVTKEELSGKVERVLGDD 120717
Score = 37.3 bits (75), Expect(2) = 6e-021
Identities = 13/22 (59%), Positives = 17/22 (77%)
Frame = +2 / +3
Query: 83 NELRDKCKERGLIVSWCPQLEV 148
+E RD+ RG+IVSWCPQ +V
Sbjct: 120321 DEFRDRVGGRGMIVSWCPQQQV 120386
Score = 36.3 bits (73), Expect(3) = 2e-032
Identities = 15/20 (75%), Positives = 15/20 (75%)
Frame = +2 / +1
Query: 5 ELGNGLYNSGKPFIWVVRSN 64
EL NGL SG PFIWVVR N
Sbjct: 133102 ELANGLELSGWPFIWVVRPN 133161
Score = 34.5 bits (69), Expect(2) = 3e-028
Identities = 12/20 (60%), Positives = 16/20 (80%)
Frame = +2 / +3
Query: 5 ELGNGLYNSGKPFIWVVRSN 64
EL +GL +G+PF+WVVR N
Sbjct: 127896 ELADGLVLTGRPFLWVVRPN 127955
Score = 29.9 bits (59), Expect(2) = 2e-024
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +2 / +3
Query: 5 ELGNGLYNSGKPFIWVVR 58
EL GL +G+PF+WVVR
Sbjct: 120228 ELALGLELAGRPFLWVVR 120281
Score = 29.0 bits (57), Expect(2) = 3e-025
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = +2 / +2
Query: 5 ELGNGLYNSGKPFIWVVR 58
EL GL + +PF+WVVR
Sbjct: 123269 ELAEGLLLTSRPFLWVVR 123322
Score = 26.7 bits (52), Expect(3) = 2e-032
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +2 / +1
Query: 383 SKDKYRKSATMWMQKAKAAMQNGGSSAKNI 472
S + + A MW A A+++ GGSS N+
Sbjct: 133483 SDEDIKARAVMWKNIACASIREGGSSHANL 133572
>gb|CW412589.1|CW412589 fsbb001f108e18f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f108e18, DNA
sequence
Length = 632
Score = 96.8 bits (205), Expect(3) = 2e-032
Identities = 35/47 (74%), Positives = 40/47 (85%)
Frame = +2 / +2
Query: 104 KERGLIVSWCPQLEVLAHKATGCFFTHCGWNSTLEAIVNGVPMAAIP 244
+ERGLIV+WCPQLEVLAH A GCF THCGWNST+E + GVPM A+P
Sbjct: 434 EERGLIVAWCPQLEVLAHPAVGCFVTHCGWNSTMEGLRIGVPMVAMP 574
Score = 46.9 bits (96), Expect(3) = 2e-032
Identities = 19/35 (54%), Positives = 21/35 (60%)
Frame = +2 / +2
Query: 5 ELGNGLYNSGKPFIWVVRSNEEHKLSNELRDKCKE 109
E+ GLYNSGK F+WVVR E KL K KE
Sbjct: 326 EMAQGLYNSGKAFLWVVRGPETSKLPKSFVSKVKE 430
Score = 34.5 bits (69), Expect(3) = 2e-032
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = +2 / +3
Query: 242 PHWADQPTISKYMESMWGLG 301
P W+DQP +KY+E +W +G
Sbjct: 573 PQWSDQPMNAKYIEDVWRVG 632
>gb|CW461238.1|CW461238 fsbb001f208m21f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f208m21, DNA
sequence
Length = 715
Score = 118 bits (252), Expect(2) = 2e-030
Identities = 52/122 (42%), Positives = 72/122 (59%)
Frame = +2 / +3
Query: 116 LIVSWCPQLEVLAHKATGCFFTHCGWNSTLEAIVNGVPMAAIPHWADQPTISKYMESMWG 295
++ +W PQ+EVL H A G F THCGWNS LE IV+GVPM P +++Q +M
Sbjct: 195 VVKNWAPQMEVLRHDAVGAFITHCGWNSALEGIVSGVPMICWPLYSEQRMNKVHMVEEMK 374
Query: 296 LGVRVRKDEKGLVTRDEVERCIKDVMDGDSKDKYRKSATMWMQKAKAAMQNGGSSAKNIT 475
+GV V+ EK LV D+VE ++ VM+ D K RK M + A A++ GGSS +
Sbjct: 375 VGVAVQGYEKELVEADQVEAKVRLVMESDEGKKLRKRLAMAKKMAADALKEGGSSYMGLE 554
Query: 476 EF 481
+F
Sbjct: 555 KF 560
Score = 35.4 bits (71), Expect(2) = 2e-030
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = +2 / +3
Query: 5 ELGNGLYNSGKPFIWVVRSNEEHKLSNEL 91
E+ GL +SG F+WVVR+ EH+ S +
Sbjct: 45 EMARGLESSGHRFLWVVRNPPEHQSSKSI 131
>gb|CX609006.1|CX609006 ANR1_10_C05.b1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_10_C05_A002 3', mRNA sequence
Length = 741
Score = 128 bits (274), Expect(2) = 7e-030
Identities = 49/104 (47%), Positives = 68/104 (65%)
Frame = +2 / +3
Query: 71 HKLSNELRDKCKERGLIVSWCPQLEVLAHKATGCFFTHCGWNSTLEAIVNGVPMAAIPHW 250
H L E D + +G++V WC QLEVL+H A GCF +HCGWNS EA+ +GVP+ +P+
Sbjct: 180 HGLDLEKDDSLQSQGMVVDWCDQLEVLSHPAVGCFVSHCGWNSATEAMASGVPIVGVPNM 359
Query: 251 ADQPTISKYMESMWGLGVRVRKDEKGLVTRDEVERCIKDVMDGD 382
DQ T +E WG+GVR ++ G++T E+ RCI+ VMD D
Sbjct: 360 FDQVTNVYLVEEEWGIGVRGERNGDGVLTGAELARCIELVMDDD 491
Score = 23.1 bits (44), Expect(2) = 7e-030
Identities = 8/20 (40%), Positives = 13/20 (65%)
Frame = +2 / +3
Query: 5 ELGNGLYNSGKPFIWVVRSN 64
E+ GL G+P++ VVR +
Sbjct: 78 EIAAGLRQCGRPYLLVVRKD 137
>gb|CW466433.1|CW466433 fsbb001f217k17k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f217k17, DNA
sequence
Length = 485
Score = 128 bits (274), Expect(2) = 7e-030
Identities = 49/104 (47%), Positives = 68/104 (65%)
Frame = +2 / +2
Query: 71 HKLSNELRDKCKERGLIVSWCPQLEVLAHKATGCFFTHCGWNSTLEAIVNGVPMAAIPHW 250
H L E D + +G++V WC QLEVL+H A GCF +HCGWNS EA+ +GVP+ +P+
Sbjct: 173 HGLDLEKDDSLQSQGMVVDWCDQLEVLSHPAVGCFVSHCGWNSATEAMASGVPIVGVPNM 352
Query: 251 ADQPTISKYMESMWGLGVRVRKDEKGLVTRDEVERCIKDVMDGD 382
DQ T +E WG+GVR ++ G++T E+ RCI+ VMD D
Sbjct: 353 FDQVTNVYLVEEEWGIGVRGERNGDGVLTGAELARCIELVMDDD 484
Score = 23.1 bits (44), Expect(2) = 7e-030
Identities = 8/20 (40%), Positives = 13/20 (65%)
Frame = +2 / +2
Query: 5 ELGNGLYNSGKPFIWVVRSN 64
E+ GL G+P++ VVR +
Sbjct: 71 EIAAGLRQCGRPYLLVVRKD 130
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 729,980,718
Number of Sequences: 832831
Number of extensions: 10775706
Number of successful extensions: 128311
Number of sequences better than 1.0e-020: 192
length of database: 163,786,556
effective HSP length: 53
effective length of database: 119,646,513
effective search space used: 15314753664
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)