TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= QAY3d01.yg.3.1
(808 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CD427097.1|CD427097 SA1_17_H08.g1_A002 Salicylic acid-tr... 398 e-115
gb|CX620912.1|CX620912 GABR1_54_G08.g1_A002 GA- or brassino... 406 e-115
gb|CB927024.1|CB927024 ABA1_11_H06.g1_A012 Abscisic acid-tr... 344 e-100
gb|BG103846.1|BG103846 RHIZ2_37_E06.b1_A003 Rhizome2 (RHIZ2... 284 1e-078
gb|BH245472.1|BH245472 pSB0705 S. bicolor BTx623 PstI-diges... 121 1e-026
gb|CW359301.1|CW359301 fsbb001f026n21k0 Sorghum methylation... 121 1e-026
gb|CW359300.1|CW359300 fsbb001f026n21f0 Sorghum methylation... 70 1e-023
gb|CW070781.1|CW070781 104_323_10591245_116_30454 Sorghum m... 63 1e-016
gb|BE362229.1|BE362229 DG1_85_D09.b1_A002 Dark Grown 1 (DG1... 50 3e-012
gb|CW070780.1|CW070780 104_323_10591245_116_30436 Sorghum m... 63 2e-011
gb|BG560142.1|BG560142 RHIZ2_69_G12.b1_A003 Rhizome2 (RHIZ2... 51 9e-010
gb|CX607235.1|CX607235 ANR1_7_A06.g1_A002 Anaerobic roots S... 50 2e-009
gb|CN148035.1|CN148035 WOUND1_53_G05.g1_A002 Wounded leaves... 50 2e-009
gb|CN149285.1|CN149285 WOUND1_61_G04.g1_A002 Wounded leaves... 50 2e-009
gb|CN142049.1|CN142049 WOUND1_3_C03.g1_A002 Wounded leaves ... 50 2e-009
gb|CB927599.1|CB927599 ABA1_26_C06.g1_A012 Abscisic acid-tr... 50 2e-009
gb|CW484304.1|CW484304 fsbb001f246g05k0 Sorghum methylation... 49 3e-009
gb|CL180837.1|CL180837 104_391_10896308_116_31928_068 Sorgh... 49 4e-009
gb|BE592617.1|BE592617 WS1_95_H02.b1_A002 Water-stressed 1 ... 48 6e-009
gb|AW923985.1|AW923985 WS1_32_F10.b1_A002 Water-stressed 1 ... 48 6e-009
gb|CW235244.1|CW235244 104_690_11214878_148_37412_055 Sorgh... 52 8e-009
gb|CW342254.1|CW342254 104_844_11486775_116_36177_064 Sorgh... 52 8e-009
gb|BG412262.1|BG412262 OV2_39_G11.b1_A002 Ovary 2 (OV2) Sor... 52 8e-009
gb|BG054172.1|BG054172 OV2_2_B09.b1_A002 Ovary 2 (OV2) Sorg... 52 8e-009
gb|CW034218.1|CW034218 104_264_10502423_114_30358 Sorghum m... 48 1e-008
gb|CW260769.1|CW260769 104_727_11229143_116_35195_086 Sorgh... 46 3e-008
gb|CW265099.1|CW265099 104_734_11231675_116_35257_044 Sorgh... 48 1e-007
gb|CW303507.1|CW303507 104_788_11465276_148_35698_080 Sorgh... 44 1e-007
gb|CN138418.1|CN138418 OX1_63_E01.g1_A002 Oxidatively-stres... 41 2e-007
gb|CW182784.1|CW182784 104_598_11164264_116_36670_058 Sorgh... 41 2e-007
gb|CW054346.1|CW054346 104_295_10516471_115_30179 Sorghum m... 58 2e-007
gb|BG465653.1|BG465653 RHIZ2_47_B01.b1_A003 Rhizome2 (RHIZ2... 46 3e-007
gb|CW271599.1|CW271599 104_743_11403084_148_35343_034 Sorgh... 40 6e-007
gb|CW158107.1|CW158107 104_561_11147878_148_36389_083 Sorgh... 42 8e-007
gb|CW158106.1|CW158106 104_561_11147878_116_36390_083 Sorgh... 42 8e-007
gb|CW349851.1|CW349851 fsbb001f010o04k0 Sorghum methylation... 44 2e-006
gb|CD224241.1|CD224241 CCC1_32_B09.g1_A007 Callus culture/c... 47 2e-006
gb|BG412301.1|BG412301 OV2_40_C07.b1_A002 Ovary 2 (OV2) Sor... 41 7e-006
gb|CW499023.1|CW499023 fsbb001f293j08f0 Sorghum methylation... 38 1e-005
gb|CW342255.1|CW342255 104_844_11486775_148_36178_064 Sorgh... 52 1e-005
gb|CD221128.1|CD221128 CCC1_73_F09.g1_A007 Callus culture/c... 44 2e-005
gb|BE357439.1|BE357439 DG1_15_E09.b2_A002 Dark Grown 1 (DG1... 44 2e-005
gb|CW122660.1|CW122660 104_501_11110790_116_34680_053 Sorgh... 44 2e-005
gb|BE359881.1|BE359881 DG1_58_F03.b2_A002 Dark Grown 1 (DG1... 44 2e-005
gb|BZ341344.1|BZ341344 ic44g06.b1 WGS-SbicolorF (JM107 adap... 43 2e-005
gb|AW283128.2|AW283128 LG1_224_H04.g1_A002 Light Grown 1 (L... 51 3e-005
gb|BG054340.1|BG054340 OV2_3_A08.b1_A002 Ovary 2 (OV2) Sorg... 42 6e-005
gb|CW313782.1|CW313782 104_804_11471470_116_35795_093 Sorgh... 49 8e-005
gb|CW354343.1|CW354343 fsbb001f017i07f0 Sorghum methylation... 39 8e-005
gb|CW158850.1|CW158850 104_564_11149046_148_36401_051 Sorgh... 35 1e-004
gb|CW135685.1|CW135685 104_520_11117978_148_34835_009 Sorgh... 35 3e-004
gb|CW135684.1|CW135684 104_520_11117978_116_34839_009 Sorgh... 35 3e-004
gb|CW338136.1|CW338136 104_838_11484582_148_36124_025 Sorgh... 35 3e-004
gb|CW243921.1|CW243921 104_704_11220312_116_37580_086 Sorgh... 47 3e-004
gb|CW325783.1|CW325783 104_820_11477874_148_35927_065 Sorgh... 47 3e-004
gb|CW022376.1|CW022376 104_161_10431803_1_30006 Sorghum met... 47 4e-004
gb|CW044699.1|CW044699 104_280_10509107_114_30262 Sorghum m... 46 5e-004
gb|CW054641.1|CW054641 104_295_10516644_115_30179 Sorghum m... 34 8e-004
gb|BG241815.1|BG241815 RHIZ2_51_B01.b1_A003 Rhizome2 (RHIZ2... 46 0.001
gb|BG558407.1|BG558407 RHIZ2_67_A12.b1_A003 Rhizome2 (RHIZ2... 46 0.001
gb|AW283129.2|AW283129 LG1_224_H03.g1_A002 Light Grown 1 (L... 45 0.001
gb|CW092957.1|CW092957 104_455_10999481_114_33047_067 Sorgh... 44 0.003
gb|CW070779.1|CW070779 104_323_10591245_114_30471 Sorghum m... 34 0.003
gb|CN142362.1|CN142362 WOUND1_9_C02.g1_A002 Wounded leaves ... 35 0.003
gb|CW070884.1|CW070884 104_323_10591293_114_30471 Sorghum m... 34 0.003
gb|CW224532.1|CW224532 104_660_11203494_116_37444_017 Sorgh... 44 0.004
gb|AW677087.1|AW677087 DG1_4_A08.b1_A002 Dark Grown 1 (DG1)... 44 0.004
gb|CW033844.1|CW033844 104_263_10502188_114_30359 Sorghum m... 43 0.005
gb|CW228650.1|CW228650 104_668_11206494_148_37253_021 Sorgh... 43 0.005
gb|CW213992.1|CW213992 104_645_11191856_148_37040_020 Sorgh... 37 0.007
gb|CN149463.1|CN149463 WOUND1_62_H11.g1_A002 Wounded leaves... 37 0.008
gb|CW220957.1|CW220957 104_655_11197639_116_37153_018 Sorgh... 42 0.009
gb|CW220958.1|CW220958 104_655_11197639_148_37154_018 Sorgh... 42 0.009
gb|CW289716.1|CW289716 104_768_11412628_148_35550_004 Sorgh... 42 0.009
gb|CW388989.1|CW388989 fsbb001f073p21f0 Sorghum methylation... 42 0.009
gb|CW492988.1|CW492988 fsbb001f283i21f0 Sorghum methylation... 42 0.009
gb|CW499156.1|CW499156 fsbb001f293m08k0 Sorghum methylation... 42 0.009
gb|CW156373.1|CW156373 104_559_11146651_116_36375_076 Sorgh... 42 0.013
gb|CW220017.1|CW220017 104_654_11197127_148_37146_088 Sorgh... 42 0.013
gb|CW424961.1|CW424961 fsbb001f135i18f0 Sorghum methylation... 42 0.013
gb|CW263777.1|CW263777 104_732_11230905_116_35239_043 Sorgh... 38 0.017
gb|CW182785.1|CW182785 104_598_11164264_148_36669_058 Sorgh... 41 0.018
gb|CW222649.1|CW222649 104_658_11202489_116_37177_043 Sorgh... 41 0.018
gb|CW229003.1|CW229003 104_670_11207073_148_37260_045 Sorgh... 41 0.018
gb|AW676954.1|AW676954 DG1_2_D02.b1_A002 Dark Grown 1 (DG1)... 41 0.018
gb|BI141571.1|BI141571 IP1_54_B04.b1_A002 Immature pannicle... 41 0.018
gb|CX620595.1|CX620595 GABR1_52_G03.g1_A002 GA- or brassino... 41 0.018
gb|CN134655.1|CN134655 OX1_27_D10.g1_A002 Oxidatively-stres... 29 0.020
gb|AW672254.1|AW672254 LG1_358_G10.b1_A002 Light Grown 1 (L... 35 0.020
gb|BG322818.1|BG322818 EM1_14_E09.b1_A002 Embryo 1 (EM1) So... 41 0.024
gb|CW383248.1|CW383248 fsbb001f065k09k0 Sorghum methylation... 37 0.025
gb|CW499024.1|CW499024 fsbb001f293j08k0 Sorghum methylation... 33 0.027
gb|BZ350313.1|BZ350313 hr53f06.g1 WGS-SbicolorF (JM107 adap... 40 0.033
gb|CW221459.1|CW221459 104_656_11197919_116_37452_088 Sorgh... 40 0.033
gb|CW420913.1|CW420913 fsbb001f128h18k0 Sorghum methylation... 40 0.046
gb|CX618718.1|CX618718 GABR1_41_F07.b1_A002 GA- or brassino... 40 0.046
gb|CL161478.1|CL161478 104_353_10805748_116_31829_036 Sorgh... 40 0.063
gb|CL187495.1|CL187495 104_403_10900925_114_32461_029 Sorgh... 40 0.063
gb|CW172378.1|CW172378 104_583_11156260_148_36535_006 Sorgh... 40 0.063
gb|CW250044.1|CW250044 104_712_11223176_116_35051_030 Sorgh... 40 0.063
gb|CW457805.1|CW457805 fsbb001f203m13f0 Sorghum methylation... 40 0.063
gb|CW463968.1|CW463968 fsbb001f212p05f0 Sorghum methylation... 40 0.063
gb|CW468710.1|CW468710 fsbb001f221a22f0 Sorghum methylation... 40 0.063
gb|AW672490.1|AW672490 LG1_360_H08.b1_A002 Light Grown 1 (L... 40 0.063
gb|BG355462.1|BG355462 EM1_16_G04.b1_A002 Embryo 1 (EM1) So... 40 0.063
gb|BG556186.1|BG556186 EM1_68_G11.b1_A002 Embryo 1 (EM1) So... 40 0.063
gb|BG557336.1|BG557336 EM1_42_G01.b1_A002 Embryo 1 (EM1) So... 40 0.063
gb|BG649336.1|BG649336 EM1_78_B12.b1_A002 Embryo 1 (EM1) So... 40 0.063
gb|BG649359.1|BG649359 EM1_78_E02.b1_A002 Embryo 1 (EM1) So... 40 0.063
gb|CD223409.1|CD223409 CCC1_27_D09.g1_A007 Callus culture/c... 40 0.063
gb|CD226401.1|CD226401 CCC1_45_H08.g1_A007 Callus culture/c... 40 0.063
gb|CD228076.1|CD228076 CCC1_5_E03.g1_A007 Callus culture/ce... 40 0.063
gb|CD228268.1|CD228268 CCC1_6_C09.g1_A007 Callus culture/ce... 40 0.063
gb|CD228465.1|CD228465 CCC1_7_B11.g1_A007 Callus culture/ce... 40 0.063
gb|CD229773.1|CD229773 CCC1_19_B01.g1_A007 Callus culture/c... 40 0.063
gb|CF489770.1|CF489770 POL1_59_B11.g1_A002 Pollen Sorghum b... 40 0.063
gb|BZ342488.1|BZ342488 ic83h06.b1 WGS-SbicolorF (JM107 adap... 39 0.086
gb|CW354344.1|CW354344 fsbb001f017i07k0 Sorghum methylation... 39 0.086
gb|BE361308.1|BE361308 DG1_71_D06.b1_A002 Dark Grown 1 (DG1... 39 0.086
gb|CF482713.1|CF482713 POL1_8_E03.g1_A002 Pollen Sorghum bi... 31 0.12
gb|CW265553.1|CW265553 104_734_11231943_116_35259_050 Sorgh... 38 0.16
gb|CW268009.1|CW268009 104_738_11401050_148_35300_071 Sorgh... 38 0.16
gb|CW268942.1|CW268942 104_740_11401609_148_36230_015 Sorgh... 38 0.16
gb|CF482234.1|CF482234 POL1_5_F01.g1_A002 Pollen Sorghum bi... 31 0.17
gb|CN146812.1|CN146812 WOUND1_43_H01.g1_A002 Wounded leaves... 31 0.17
gb|CN150675.1|CN150675 WOUND1_70_F06.g1_A002 Wounded leaves... 31 0.19
gb|BF481092.1|BF481092 FM1_16_C09.b1_A003 Floral-Induced Me... 34 0.19
gb|BG465729.1|BG465729 RHIZ2_47_H11.b1_A003 Rhizome2 (RHIZ2... 34 0.19
gb|CD221138.1|CD221138 CCC1_73_D04.g1_A007 Callus culture/c... 35 0.22
gb|CG993104.1|CG993104 pSB1028 Sorghum propinquum RFLP prob... 38 0.22
gb|CL173220.1|CL173220 104_376_10890726_116_31795_246 Sorgh... 38 0.22
gb|CW218756.1|CW218756 104_652_11196359_116_37528_088 Sorgh... 38 0.22
gb|CW287974.1|CW287974 104_766_11411702_148_37442_059 Sorgh... 38 0.22
gb|CW295746.1|CW295746 104_777_11461111_116_35620_028 Sorgh... 38 0.22
gb|CW322127.1|CW322127 104_815_11475924_148_35943_036 Sorgh... 38 0.22
gb|CW439489.1|CW439489 fsbb001f157k15f0 Sorghum methylation... 38 0.22
gb|CN151960.1|CN151960 WOUND1_78_G07.g1_A002 Wounded leaves... 38 0.22
gb|AY502982.1| Sorghum arundinaceum clone 1028-LWA4 RFLP pr... 38 0.22
gb|AW924488.1|AW924488 WS1_70_C03.b1_A002 Water-stressed 1 ... 34 0.23
gb|BG052970.1|BG052970 RHIZ2_15_F10.b1_A003 Rhizome2 (RHIZ2... 37 0.23
gb|CN131211.1|CN131211 RHOH1_46_C03.g1_A002 Acid- and alkal... 35 0.24
gb|CX616554.1|CX616554 GABR1_28_D01.g1_A002 GA- or brassino... 37 0.29
gb|BZ340408.1|BZ340408 ic38g06.g1 WGS-SbicolorF (JM107 adap... 37 0.31
gb|BH245610.2|BH245610 pSB1028 S. bicolor BTx623 PstI-diges... 37 0.31
gb|CL161477.1|CL161477 104_353_10805748_114_31828_036 Sorgh... 37 0.31
gb|CL183061.1|CL183061 104_395_10897923_114_31917_147 Sorgh... 37 0.31
gb|CW041119.1|CW041119 104_274_10506409_116_30479 Sorghum m... 37 0.31
gb|CW041120.1|CW041120 104_274_10506409_116_30481 Sorghum m... 37 0.31
gb|CW070019.1|CW070019 104_320_10526433_1_30088 Sorghum met... 37 0.31
gb|CW119136.1|CW119136 104_496_11108595_148_34632_016 Sorgh... 37 0.31
gb|CW226715.1|CW226715 104_664_11205033_116_37215_033 Sorgh... 37 0.31
gb|CW263395.1|CW263395 104_731_11230669_116_35211_053 Sorgh... 37 0.31
gb|CW271971.1|CW271971 104_744_11403246_148_36227_027 Sorgh... 37 0.31
gb|CW377567.1|CW377567 fsbb001f055p02f0 Sorghum methylation... 37 0.31
gb|BZ421693.1|BZ421693 id08d07.b1 WGS-SbicolorF (DH5a methy... 37 0.42
gb|CW513474.1|CW513474 115_4_10511640_1_30021 Sorghum unfil... 37 0.42
gb|CW235927.1|CW235927 104_691_11215305_148_37401_037 Sorgh... 37 0.42
gb|CW287928.1|CW287928 104_766_11411679_148_35533_060 Sorgh... 37 0.42
gb|CW337498.1|CW337498 104_837_11484202_148_36116_041 Sorgh... 37 0.42
gb|BF586166.1|BF586166 FM1_26_E06.b1_A003 Floral-Induced Me... 37 0.42
gb|BG052958.1|BG052958 RHIZ2_15_E09.b1_A003 Rhizome2 (RHIZ2... 37 0.42
gb|BG052959.1|BG052959 RHIZ2_15_E10.b1_A003 Rhizome2 (RHIZ2... 37 0.42
gb|BG559304.1|BG559304 RHIZ2_53_B11.b1_A003 Rhizome2 (RHIZ2... 37 0.42
gb|BI075808.1|BI075808 IP1_21_E01.b1_A002 Immature pannicle... 37 0.42
gb|CD204075.1|CD204075 HS1_3_E10.g1_A012 Heat-shocked seedl... 37 0.42
gb|CD236327.1|CD236327 SS1_33_A08.g1_A012 Salt-stressed see... 37 0.42
gb|CW097786.1|CW097786 104_464_11002654_116_34363_095 Sorgh... 29 0.55
gb|BZ351200.1|BZ351200 hv19h11.g1 WGS-SbicolorF (JM107 adap... 36 0.58
gb|CL180131.1|CL180131 104_389_10895779_116_31908_307 Sorgh... 36 0.58
gb|CW280536.1|CW280536 104_755_11407672_116_35444_052 Sorgh... 36 0.58
gb|CW438504.1|CW438504 fsbb001f156c20k0 Sorghum methylation... 36 0.58
gb|CW450067.1|CW450067 fsbb001f188i08f0 Sorghum methylation... 36 0.58
gb|AW285753.2|AW285753 LG1_223_B09.b1_A002 Light Grown 1 (L... 36 0.58
gb|AW285791.2|AW285791 LG1_223_G10.b1_A002 Light Grown 1 (L... 36 0.58
gb|BZ340058.1|BZ340058 ic36e03.g1 WGS-SbicolorF (JM107 adap... 36 0.80
gb|CL163273.1|CL163273 104_356_10807025_116_31811_161 Sorgh... 36 0.80
gb|CW106728.1|CW106728 104_476_11096149_116_34468_055 Sorgh... 36 0.80
gb|BE364920.1|BE364920 PI1_21_C10.b1_A002 Pathogen induced ... 36 0.80
gb|BE364921.1|BE364921 PI1_21_B10.b1_A002 Pathogen induced ... 36 0.80
gb|CD230581.1|CD230581 SS1_44_G06.g1_A012 Salt-stressed see... 36 0.80
gb|AY502964.1| Sorghum bicolor clone 1028-BTx3197 RFLP prob... 36 0.80
gb|AY502965.1| Sorghum bicolor clone 1028-RTx430 RFLP probe... 36 0.80
gb|AY502966.1| Sorghum bicolor clone 1028-102069 RFLP probe... 36 0.80
gb|AY502967.1| Sorghum bicolor clone 1028-152702 RFLP probe... 36 0.80
gb|AY502968.1| Sorghum bicolor clone 1028-195684 RFLP probe... 36 0.80
gb|AY502969.1| Sorghum arundinaceum clone 1028-225905 RFLP ... 36 0.80
gb|AY502970.1| Sorghum bicolor clone 1028-22913 RFLP probe ... 36 0.80
gb|AY502971.1| Sorghum bicolor clone 1028-246712 RFLP probe... 36 0.80
gb|AY502972.1| Sorghum bicolor clone 1028-257595 RFLP probe... 36 0.80
gb|AY502973.1| Sorghum bicolor clone 1028-267380 RFLP probe... 36 0.80
gb|AY502974.1| Sorghum bicolor clone 1028-50875 RFLP probe ... 36 0.80
gb|AY502975.1| Sorghum bicolor clone 1028-51030 RFLP probe ... 36 0.80
gb|AY502976.1| Sorghum bicolor clone 1028-514605 RFLP probe... 36 0.80
gb|AY502977.1| Sorghum bicolor clone 1028-56003 RFLP probe ... 36 0.80
gb|AY502978.1| Sorghum bicolor clone 1028-56174 RFLP probe ... 36 0.80
gb|AY502979.1| Sorghum bicolor clone 1028-77034 RFLP probe ... 36 0.80
gb|AY502980.1| Sorghum bicolor clone 1028-82459 RFLP probe ... 36 0.80
gb|AY502981.1| Sorghum bicolor clone 1028-92381 RFLP probe ... 36 0.80
gb|AY502983.1| Sorghum arundinaceum clone 1028-LWA8 RFLP pr... 36 0.80
gb|AY502984.1| Sorghum bicolor clone 1028-RTx406 RFLP probe... 36 0.80
gb|AY502985.1| Sorghum bicolor clone 1028-SC0033 RFLP probe... 36 0.80
gb|AY502986.1| Sorghum bicolor clone 1028-SC0155 RFLP probe... 36 0.80
gb|AY502987.1| Sorghum bicolor clone 1028-SC0326 RFLP probe... 36 0.80
gb|AY502988.1| Sorghum bicolor clone 1028-SC0599 RFLP probe... 36 0.80
gb|AY502989.1| Sorghum bicolor clone 1028-SC0706 RFLP probe... 36 0.80
gb|BI074860.1|BI074860 IP1_16_B05.b1_A002 Immature pannicle... 31 1.0
gb|CL186076.1|CL186076 104_400_10899974_116_32405_053 Sorgh... 35 1.1
gb|CW099214.1|CW099214 104_466_11003429_116_34380_029 Sorgh... 35 1.1
gb|CW106729.1|CW106729 104_476_11096149_148_34464_055 Sorgh... 35 1.1
gb|CW129503.1|CW129503 104_511_11114604_148_34761_038 Sorgh... 35 1.1
gb|CW226668.1|CW226668 104_664_11205007_148_37220_020 Sorgh... 35 1.1
gb|CW266935.1|CW266935 104_736_11232704_148_35288_018 Sorgh... 35 1.1
gb|CW287973.1|CW287973 104_766_11411702_116_37443_059 Sorgh... 35 1.1
gb|CW412101.1|CW412101 fsbb001f107j09f0 Sorghum methylation... 35 1.1
gb|BE362791.1|BE362791 DG1_89_G03.b1_A002 Dark Grown 1 (DG1... 35 1.1
gb|BE367547.1|BE367547 PI1_9_A01.b1_A002 Pathogen induced 1... 35 1.1
gb|BE919277.1|BE919277 FM1_4_D08.b1_A003 Floral-Induced Mer... 35 1.1
gb|BG558220.1|BG558220 RHIZ2_64_E11.b1_A003 Rhizome2 (RHIZ2... 35 1.1
gb|BG558257.1|BG558257 RHIZ2_64_H03.b1_A003 Rhizome2 (RHIZ2... 35 1.1
gb|BG560483.1|BG560483 RHIZ2_74_H12.b1_A003 Rhizome2 (RHIZ2... 35 1.1
gb|CB925393.1|CB925393 ABA1_32_E01.g1_A012 Abscisic acid-tr... 35 1.1
gb|CD205082.1|CD205082 HS1_11_A02.g1_A012 Heat-shocked seed... 35 1.1
gb|CD212664.1|CD212664 HS1_6_B06.g1_A012 Heat-shocked seedl... 35 1.1
gb|CD213868.1|CD213868 HS1_53_E05.g1_A012 Heat-shocked seed... 35 1.1
gb|CD227489.1|CD227489 CCC1_51_C10.g1_A007 Callus culture/c... 35 1.1
gb|CD234899.1|CD234899 SS1_18_E03.g1_A012 Salt-stressed see... 35 1.1
gb|CD234974.1|CD234974 SS1_19_H12.g1_A012 Salt-stressed see... 35 1.1
gb|CD430360.1|CD430360 ETH1_18_D02.g1_A002 Ethylene-treated... 35 1.1
gb|CN125491.1|CN125491 RHOH1_11_A01.g1_A002 Acid- and alkal... 35 1.1
gb|CN136094.1|CN136094 OX1_40_F06.g1_A002 Oxidatively-stres... 35 1.1
gb|CX621659.1|CX621659 GABR1_59_A03.g1_A002 GA- or brassino... 35 1.1
gb|CW068608.1|CW068608 104_317_10525211_1_30096 Sorghum met... 35 1.5
gb|CW268782.1|CW268782 104_739_11401517_116_35308_019 Sorgh... 35 1.5
gb|CW436910.1|CW436910 fsbb001f153m09k0 Sorghum methylation... 35 1.5
gb|AW287290.2|AW287290 LG1_269_A10.b1_A002 Light Grown 1 (L... 35 1.5
gb|AW287348.2|AW287348 LG1_269_G09.b1_A002 Light Grown 1 (L... 35 1.5
gb|CL160918.1|CL160918 104_352_10805342_114_31826_014 Sorgh... 35 2.1
gb|CL164245.1|CL164245 104_358_10807772_114_31814_140 Sorgh... 35 2.1
gb|CL164246.1|CL164246 104_358_10807772_116_31815_140 Sorgh... 35 2.1
gb|CW097503.1|CW097503 104_463_11002490_116_34347_005 Sorgh... 35 2.1
gb|CW199673.1|CW199673 104_624_11183637_148_36850_081 Sorgh... 35 2.1
gb|CW233559.1|CW233559 104_686_11213502_148_37375_017 Sorgh... 35 2.1
gb|CW272140.1|CW272140 104_744_11403312_148_36227_090 Sorgh... 35 2.1
gb|CW274357.1|CW274357 104_747_11404384_148_35371_060 Sorgh... 35 2.1
gb|CW285131.1|CW285131 104_762_11410170_148_35500_075 Sorgh... 35 2.1
gb|CW398112.1|CW398112 fsbb001f087g18f0 Sorghum methylation... 35 2.1
gb|CW408089.1|CW408089 fsbb001f101n08k0 Sorghum methylation... 35 2.1
gb|CW485827.1|CW485827 fsbb001f248m05f0 Sorghum methylation... 35 2.1
gb|AW744906.1|AW744906 LG1_384_G03.b1_A002 Light Grown 1 (L... 35 2.1
gb|AW923109.1|AW923109 DG1_49_D11.b1_A002 Dark Grown 1 (DG1... 35 2.1
gb|CB928134.1|CB928134 ABA1_36_F08.g1_A012 Abscisic acid-tr... 35 2.1
gb|CD230329.1|CD230329 SS1_42_D07.g1_A012 Salt-stressed see... 35 2.1
gb|CD232469.1|CD232469 SS1_45_H04.g1_A012 Salt-stressed see... 35 2.1
gb|CD463620.1|CD463620 ETH1_45_F04.g1_A002 Ethylene-treated... 35 2.1
gb|CN131702.1|CN131702 OX1_1_G01.g1_A002 Oxidatively-stress... 35 2.1
gb|CN138414.1|CN138414 OX1_63_D08.g1_A002 Oxidatively-stres... 35 2.1
gb|CN144921.1|CN144921 WOUND1_25_F03.g1_A002 Wounded leaves... 35 2.1
gb|CN150832.1|CN150832 WOUND1_71_F01.g1_A002 Wounded leaves... 35 2.1
gb|CN151112.1|CN151112 WOUND1_73_B03.g1_A002 Wounded leaves... 35 2.1
gb|CN151783.1|CN151783 WOUND1_77_D01.g1_A002 Wounded leaves... 35 2.1
gb|CN134568.1|CN134568 OX1_27_D10.b1_A002 Oxidatively-stres... 29 2.7
gb|CW025256.1|CW025256 104_226_10488084_114_30494 Sorghum m... 34 2.8
gb|CW157961.1|CW157961 104_561_11147801_116_36391_071 Sorgh... 34 2.8
gb|CW271970.1|CW271970 104_744_11403246_116_36228_027 Sorgh... 34 2.8
gb|CW344706.1|CW344706 104_847_11488096_148_36199_056 Sorgh... 34 2.8
gb|CW494906.1|CW494906 fsbb001f286g22f0 Sorghum methylation... 34 2.8
gb|AW677064.1|AW677064 DG1_4_C07.b1_A002 Dark Grown 1 (DG1)... 34 2.8
gb|AW746742.1|AW746742 WS1_55_G12.b1_A002 Water-stressed 1 ... 34 2.8
gb|BE596371.1|BE596371 PI1_52_B04.b1_A002 Pathogen induced ... 34 2.8
gb|BE600834.1|BE600834 PI1_90_G02.b1_A002 Pathogen induced ... 34 2.8
gb|BG557388.1|BG557388 EM1_43_D02.b1_A002 Embryo 1 (EM1) So... 34 2.8
gb|CD223378.1|CD223378 CCC1_27_A03.g1_A007 Callus culture/c... 34 2.8
gb|CD227164.1|CD227164 CCC1_4_C01.g1_A007 Callus culture/ce... 34 2.8
gb|CD212217.1|CD212217 HS1_71_G10.g1_A012 Heat-shocked seed... 31 3.2
gb|BG465182.1|BG465182 EM1_35_G10.b1_A002 Embryo 1 (EM1) So... 31 3.6
gb|BZ332373.1|BZ332373 hx27c11.b1 WGS-SbicolorF (JM107 adap... 34 3.9
gb|CW266934.1|CW266934 104_736_11232704_116_35284_018 Sorgh... 34 3.9
gb|AW672156.1|AW672156 LG1_357_C11.b1_A002 Light Grown 1 (L... 34 3.9
gb|BE595423.1|BE595423 PI1_55_C03.b1_A002 Pathogen induced ... 34 3.9
gb|BF588370.1|BF588370 FM1_40_H05.b1_A003 Floral-Induced Me... 34 3.9
gb|BG159499.1|BG159499 OV2_5_B05.b1_A002 Ovary 2 (OV2) Sorg... 34 3.9
gb|BG357162.1|BG357162 OV2_10_E12.b1_A002 Ovary 2 (OV2) Sor... 34 3.9
gb|BG948480.1|BG948480 IP1_10_C03.b1_A002 Immature pannicle... 34 3.9
gb|BI074542.1|BI074542 IP1_16_B05.g1_A002 Immature pannicle... 34 3.9
gb|BM324736.1|BM324736 PIC1_35_A05.b1_A002 Pathogen-infecte... 34 3.9
gb|CN137828.1|CN137828 OX1_60_A02.b1_A002 Oxidatively-stres... 34 3.9
gb|CN137897.1|CN137897 OX1_60_A02.g1_A002 Oxidatively-stres... 34 3.9
gb|DN552376.1|DN552376 pSPR-RT-MR-H2_A02r_C279 pSPR Sorghum... 34 3.9
gb|BG052960.1|BG052960 RHIZ2_15_E11.b1_A003 Rhizome2 (RHIZ2... 34 3.9
gb|CW472750.1|CW472750 fsbb001f227n08k0 Sorghum methylation... 31 5.1
gb|CL152017.1|CL152017 104_335_10779662_114_31363_062 Sorgh... 33 5.4
gb|CL152018.1|CL152018 104_335_10779662_116_31364_062 Sorgh... 33 5.4
gb|CL192185.1|CL192185 104_414_10940064_114_32248_084 Sorgh... 33 5.4
gb|CW036151.1|CW036151 104_267_10503591_115_30375 Sorghum m... 33 5.4
gb|CW087241.1|CW087241 104_431_10947494_116_33023_053 Sorgh... 33 5.4
gb|CW126923.1|CW126923 104_507_11113154_116_34733_001 Sorgh... 33 5.4
gb|CW403651.1|CW403651 fsbb001f095h14k0 Sorghum methylation... 33 5.4
gb|CW415901.1|CW415901 fsbb001f116d09k0 Sorghum methylation... 33 5.4
gb|AW563338.1|AW563338 LG1_235_D02.b1_A002 Light Grown 1 (L... 33 5.4
gb|BM326145.1|BM326145 PIC1_66_C11.b1_A002 Pathogen-infecte... 33 5.4
gb|CF430140.1|CF430140 PH1_26_C06.g1_A002 Phosphorous-defic... 33 5.4
gb|CF430629.1|CF430629 NIT1_3_C01.g1_A002 Nitrogen-deficien... 33 5.4
gb|CF433818.1|CF433818 NIT1_30_A09.g1_A002 Nitrogen-deficie... 33 5.4
gb|CN132737.1|CN132737 OX1_7_H06.g1_A002 Oxidatively-stress... 33 5.4
gb|BZ338846.1|BZ338846 ic27e09.g1 WGS-SbicolorF (JM107 adap... 33 7.4
gb|BZ345764.1|BZ345764 ht56g06.b1 WGS-SbicolorF (JM107 adap... 33 7.4
gb|CW107803.1|CW107803 104_478_11096794_116_34486_043 Sorgh... 33 7.4
gb|CW107804.1|CW107804 104_478_11096794_148_34482_043 Sorgh... 33 7.4
gb|CW163203.1|CW163203 104_570_11151340_116_36452_004 Sorgh... 33 7.4
gb|CW241261.1|CW241261 104_700_11218669_148_37540_057 Sorgh... 33 7.4
gb|CW242395.1|CW242395 104_702_11219320_148_37565_064 Sorgh... 33 7.4
gb|CW260425.1|CW260425 104_727_11228959_116_35197_030 Sorgh... 33 7.4
gb|CW268561.1|CW268561 104_739_11401375_116_35308_026 Sorgh... 33 7.4
gb|CW443921.1|CW443921 fsbb001f164e10f0 Sorghum methylation... 33 7.4
gb|BE593532.1|BE593532 WS1_100_D07.b1_A002 Water-stressed 1... 33 7.4
gb|BF480990.1|BF480990 FM1_15_A05.b1_A003 Floral-Induced Me... 33 7.4
gb|BI211340.1|BI211340 IP1_59_E02.b1_A002 Immature pannicle... 33 7.4
gb|CD424638.1|CD424638 SA1_8_F08.g1_A002 Salicylic acid-tre... 33 7.4
gb|CD430197.1|CD430197 ETH1_17_F08.g1_A002 Ethylene-treated... 33 7.4
gb|CN126361.1|CN126361 RHOH1_16_E07.g1_A002 Acid- and alkal... 33 7.4
gb|CX615254.1|CX615254 GABR1_19_C01.b1_A002 GA- or brassino... 33 7.4
gb|CX615337.1|CX615337 GABR1_19_C01.g1_A002 GA- or brassino... 33 7.4
gb|AC169380.1| Sorghum bicolor clone SB_BBc0009F21, WORKING... 33 7.4
gb|BE360569.1|BE360569 DG1_64_B12.b1_A002 Dark Grown 1 (DG1... 25 8.1
>gb|CD427097.1|CD427097 SA1_17_H08.g1_A002 Salicylic acid-treated seedlings Sorghum bicolor
cDNA clone SA1_17_H08_A002 5', mRNA sequence
Length = 676
Score = 398 bits (864), Expect(3) = e-115
Identities = 164/176 (93%), Positives = 170/176 (96%)
Frame = +2 / +1
Query: 191 HPCAGEMELKPGMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVATLVQKEN 370
HP AGEMELKPGMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVATLVQKEN
Sbjct: 148 HPRAGEMELKPGMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVATLVQKEN 327
Query: 371 SKFHGDLRIPSSIFVKCDVSNADNLAACFEKHVQTYNGLDICINCAGIANKTLVYDDTSD 550
KFHGDLR+PS +FVKCDVSNADNLAACFEKHV TY GLDICINCAGIANKTLVY+DTSD
Sbjct: 328 GKFHGDLRVPSCLFVKCDVSNADNLAACFEKHVHTYGGLDICINCAGIANKTLVYNDTSD 507
Query: 551 GTRTWRHAVNVNLVAVIDGTRIASQIMRNQKKPGVIINIGSAAGLYPMFLDPVYSA 718
GTRTWRHAVNVNLVAV+DGTRIASQIMR+QKKPGVIINIGSAAGLYPMF DP+YSA
Sbjct: 508 GTRTWRHAVNVNLVAVVDGTRIASQIMRDQKKPGVIINIGSAAGLYPMFYDPIYSA 675
Score = 359 bits (779), Expect(3) = e-104
Identities = 161/176 (91%), Positives = 165/176 (93%)
Frame = -2 / -3
Query: 717 ALYTGSRNIG*RPAAEPMFIMTPGFFWFRII*LAMRVPSMTATRFTLTACLHVLVPSDVS 538
ALY GS NIG*RPAAEP+FIMTPGFFW RII*LA+RVPS TATRFTLTACLHVLVPSDVS
Sbjct: 674 ALYMGS*NIG*RPAAEPIFIMTPGFFWSRII*LAIRVPSTTATRFTLTACLHVLVPSDVS 495
Query: 537 S*TSVLLAIPAQLMQISSPLYVCTCFSKQAARLSALLTSHLTNIEDGILRSP*NLLFSF* 358
*TSVLLAIPAQLMQISSP VCTCFSK AARLSALLTSHLTN +DG LRSP*NL FSF*
Sbjct: 494 L*TSVLLAIPAQLMQISSPP*VCTCFSKHAARLSALLTSHLTNKQDGTLRSP*NLPFSF* 315
Query: 357 TNVATSLPFSSEKSTTVTNKPLLAKAIQSAFPMPEAPPVTSADMPGLSSISPAQGW 190
TNVATSLPFSSEKSTTVTNKPLLAKAIQSAFPMPEAPPVTSADMPGLSSISPA+GW
Sbjct: 314 TNVATSLPFSSEKSTTVTNKPLLAKAIQSAFPMPEAPPVTSADMPGLSSISPARGW 147
Score = 259 bits (559), Expect(2) = 8e-070
Identities = 117/150 (78%), Positives = 122/150 (81%)
Frame = -3 / -1
Query: 713 YIRDRGT*DKDLPLNQCLL*HRASFGFALFDLQCEYXXXXXXXXXXXHASMF*FHQMYHH 534
YI D T*DKDLPLNQ LL*H+ASFG ALFDL+ EY HAS F*FHQMYH+
Sbjct: 670 YIWDHRT*DKDLPLNQYLL*HQASFGLALFDLRYEYHQRQQQGSH*QHASTF*FHQMYHY 491
Query: 533 KLVFY*QFQHS*CRYLVHCMSVHASQNKQQDYLHY*HHT*QILKMEF*DLREICYFLFEL 354
KLVFY QFQHS*CRYLVH VHASQN +QDYLHY*H T*QI K E *DL EIC+FLFEL
Sbjct: 490 KLVFYWQFQHS*CRYLVHRKCVHASQNMRQDYLHY*HRT*QINKTEL*DLHEICHFLFEL 311
Query: 353 M*QLLFHFPLRNQRQSQINPSLQKQYKVLS 264
M*QLLFHFPLRNQRQSQINPSLQKQYKVLS
Sbjct: 310 M*QLLFHFPLRNQRQSQINPSLQKQYKVLS 221
Score = 184 bits (396), Expect(3) = 1e-078
Identities = 81/92 (88%), Positives = 84/92 (91%)
Frame = -1 / -2
Query: 505 TVDADI*SIVCLYMLLKTSSKIICITNITLNKY*RWNSKISVKFAIFFLN*CSNFSSIFL 326
TVDADI*S V +YMLLKT KIICITNI LNK R NSKIS+KFAIFFLN*CSNFSSIFL
Sbjct: 462 TVDADI*STVSVYMLLKTCGKIICITNIALNK*TRRNSKISMKFAIFFLN*CSNFSSIFL 283
Query: 325 *EINDSHK*TPPCKSNTKCFPDAGGAAGDERR 230
*EINDSHK*TPPCKSNTKCFPDAGGAAG+ERR
Sbjct: 282 *EINDSHK*TPPCKSNTKCFPDAGGAAGNERR 187
Score = 117 bits (251), Expect(3) = 1e-078
Identities = 47/52 (90%), Positives = 49/52 (94%)
Frame = -1 / -2
Query: 718 RTIYGIEEHRIKTCR*TNVYYDTGLLLVSHYLTCNASTINDSNKVHINSMPP 563
RTIYGI EHRIKTCR*TN+YYDT LLLVSHYLTC+ STINDSNKVHINSMPP
Sbjct: 675 RTIYGIIEHRIKTCR*TNIYYDTRLLLVSHYLTCDTSTINDSNKVHINSMPP 520
Score = 109 bits (232), Expect(6) = 1e-065
Identities = 46/54 (85%), Positives = 50/54 (92%)
Frame = +1 / +3
Query: 409 IC*V*C**CR*SCCLF*EACTDIQWTRYLHQLCWNC**NTSL**YI*WN*NMEA 570
IC*V C**CR*SC +F*EACT ++WTRYLHQLCWNC *NTSL**YI*WN*N+EA
Sbjct: 366 IC*VRC**CR*SCRMF*EACTHLRWTRYLHQLCWNCQ*NTSL**YI*WN*NVEA 527
Score = 104 bits (222), Expect(3) = 7e-038
Identities = 51/76 (67%), Positives = 54/76 (71%)
Frame = +3 / +2
Query: 318 ISQRKMEEKLLH*FKKKIANFTEILEFHLQYXXXXXXXXXXXXXXXXRSMYRHTMD*ISA 497
ISQRKMEEKLLH*FKKK+ANF EILEF L Y RSMY T+D*ISA
Sbjct: 275 ISQRKMEEKLLH*FKKKMANFMEILEFRLVYLLSAMLVMQIILPHVLRSMYTLTVD*ISA 454
Query: 498 STVLELLIKH*FMMIH 545
STVLEL IKH*F+MIH
Sbjct: 455 STVLELPIKH*FIMIH 502
Score = 81.7 bits (172), Expect(6) = 1e-065
Identities = 29/29 (100%), Positives = 29/29 (100%)
Frame = +1 / +3
Query: 265 ESTLYCFCKEGFICDCR*FLRGKWKRSCY 351
ESTLYCFCKEGFICDCR*FLRGKWKRSCY
Sbjct: 222 ESTLYCFCKEGFICDCR*FLRGKWKRSCY 308
Score = 77.6 bits (163), Expect(6) = 1e-065
Identities = 31/39 (79%), Positives = 34/39 (87%)
Frame = +1 / +3
Query: 601 *WYSHCKSNNAKPKEARCHNKHWFSGRSLSYVPRSRI*C 717
*WYS+ KSNNA+PKEA CHNK+WFSGRSLSYV S I*C
Sbjct: 558 *WYSYRKSNNARPKEAWCHNKYWFSGRSLSYVL*SHI*C 674
Score = 66.1 bits (138), Expect(3) = 7e-038
Identities = 31/34 (91%), Positives = 31/34 (91%)
Frame = +3 / +2
Query: 618 QVK*CETKRSPVS**TLVQRQVFILCSSIPYIVR 719
QVK*CETKRS VS** LVQRQVFILCS IPYIVR
Sbjct: 575 QVK*CETKRSLVS**ILVQRQVFILCSMIPYIVR 676
Score = 32.2 bits (64), Expect(3) = 1e-078
Identities = 11/12 (91%), Positives = 11/12 (91%)
Frame = -3 / -3
Query: 113 PAGTRNCRGRSG 78
PAGTRNCRGR G
Sbjct: 62 PAGTRNCRGRGG 27
Score = 32.2 bits (64), Expect(3) = e-104
Identities = 10/14 (71%), Positives = 13/14 (92%)
Frame = -2 / -2
Query: 120 RGSGRHAELPRPKW 79
+G+GRHAELPR +W
Sbjct: 69 QGTGRHAELPRERW 28
Score = 30.4 bits (60), Expect(3) = e-115
Identities = 15/20 (75%), Positives = 15/20 (75%)
Frame = +1 / +1
Query: 115 ASSRFASRTSRLRRCDSSAA 174
ASSRFASRTS LR SS A
Sbjct: 85 ASSRFASRTSPLRFLSSSTA 144
Score = 29.5 bits (58), Expect(3) = 7e-038
Identities = 13/23 (56%), Positives = 15/23 (65%)
Frame = +1 / +1
Query: 79 PLRPRQFRVPAGASSRFASRTSR 147
P PRQFRVPAGA + +SR
Sbjct: 28 PPLPRQFRVPAGALYLYPIASSR 96
Score = 29.0 bits (57), Expect(2) = 8e-070
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = -1 / -1
Query: 127 SGTRLRPARGTAEAEVGK 74
+ TR R ARGTAE EVG+
Sbjct: 76 TSTRHRQARGTAEGEVGE 23
Score = 28.6 bits (56), Expect(3) = e-115
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = +2 / +2
Query: 77 PHFGLGSSACRPEP 118
PH LGSSAC P P
Sbjct: 26 PHLSLGSSACLPVP 67
Score = 27.2 bits (53), Expect(3) = e-104
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = -1 / -1
Query: 145 AKCEMRSGTR 116
AKCEMRSGTR
Sbjct: 115 AKCEMRSGTR 86
Score = 26.7 bits (52), Expect(6) = 1e-065
Identities = 12/15 (80%), Positives = 12/15 (80%)
Frame = +3 / +3
Query: 78 PTSASAVPRAGRSLV 122
PTS SAVPRA R LV
Sbjct: 27 PTSPSAVPRACRCLV 71
Score = 25.8 bits (50), Expect(6) = 1e-065
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = +3 / +3
Query: 117 LVPLRISHFA 146
LVPLRISHFA
Sbjct: 87 LVPLRISHFA 116
Score = 23.5 bits (45), Expect(6) = 1e-065
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +1 / +2
Query: 148 LRRCDSSAA 174
LRRCDSSAA
Sbjct: 110 LRRCDSSAA 136
>gb|CX620912.1|CX620912 GABR1_54_G08.g1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_54_G08_A002 5', mRNA sequence
Length = 650
Score = 406 bits (881), Expect(2) = e-115
Identities = 167/180 (92%), Positives = 173/180 (96%)
Frame = +2 / +2
Query: 191 HPCAGEMELKPGMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVATLVQKEN 370
HP AGEMELKPGMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVATLVQKEN
Sbjct: 110 HPRAGEMELKPGMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVATLVQKEN 289
Query: 371 SKFHGDLRIPSSIFVKCDVSNADNLAACFEKHVQTYNGLDICINCAGIANKTLVYDDTSD 550
KFHGDLR+PS +FVKCDVSNADNLAACFEKHV TY GLDICINCAGIANKTLVY+DTSD
Sbjct: 290 GKFHGDLRVPSCLFVKCDVSNADNLAACFEKHVHTYGGLDICINCAGIANKTLVYNDTSD 469
Query: 551 GTRTWRHAVNVNLVAVIDGTRIASQIMRNQKKPGVIINIGSAAGLYPMFLDPVYSAAKGG 730
GTRTWRHAVNVNLVAV+DGTRIASQIMR+QKKPGVIINIGSAAGLYPMF DP+YSA KGG
Sbjct: 470 GTRTWRHAVNVNLVAVVDGTRIASQIMRDQKKPGVIINIGSAAGLYPMFYDPIYSATKGG 649
Score = 369 bits (799), Expect(3) = e-104
Identities = 164/180 (91%), Positives = 168/180 (93%)
Frame = -2 / -3
Query: 729 PPFAALYTGSRNIG*RPAAEPMFIMTPGFFWFRII*LAMRVPSMTATRFTLTACLHVLVP 550
PPF ALY GS NIG*RPAAEP+FIMTPGFFW RII*LA+RVPS TATRFTLTACLHVLVP
Sbjct: 648 PPFVALYMGS*NIG*RPAAEPIFIMTPGFFWSRII*LAIRVPSTTATRFTLTACLHVLVP 469
Query: 549 SDVSS*TSVLLAIPAQLMQISSPLYVCTCFSKQAARLSALLTSHLTNIEDGILRSP*NLL 370
SDVS *TSVLLAIPAQLMQISSP VCTCFSK AARLSALLTSHLTN +DG LRSP*NL
Sbjct: 468 SDVSL*TSVLLAIPAQLMQISSPP*VCTCFSKHAARLSALLTSHLTNKQDGTLRSP*NLP 289
Query: 369 FSF*TNVATSLPFSSEKSTTVTNKPLLAKAIQSAFPMPEAPPVTSADMPGLSSISPAQGW 190
FSF*TNVATSLPFSSEKSTTVTNKPLLAKAIQSAFPMPEAPPVTSADMPGLSSISPA+GW
Sbjct: 288 FSF*TNVATSLPFSSEKSTTVTNKPLLAKAIQSAFPMPEAPPVTSADMPGLSSISPARGW 109
Score = 259 bits (559), Expect = 5e-068
Identities = 117/150 (78%), Positives = 122/150 (81%)
Frame = -3 / -1
Query: 713 YIRDRGT*DKDLPLNQCLL*HRASFGFALFDLQCEYXXXXXXXXXXXHASMF*FHQMYHH 534
YI D T*DKDLPLNQ LL*H+ASFG ALFDL+ EY HAS F*FHQMYH+
Sbjct: 632 YIWDHRT*DKDLPLNQYLL*HQASFGLALFDLRYEYHQRQQQGSH*QHASTF*FHQMYHY 453
Query: 533 KLVFY*QFQHS*CRYLVHCMSVHASQNKQQDYLHY*HHT*QILKMEF*DLREICYFLFEL 354
KLVFY QFQHS*CRYLVH VHASQN +QDYLHY*H T*QI K E *DL EIC+FLFEL
Sbjct: 452 KLVFYWQFQHS*CRYLVHRKCVHASQNMRQDYLHY*HRT*QINKTEL*DLHEICHFLFEL 273
Query: 353 M*QLLFHFPLRNQRQSQINPSLQKQYKVLS 264
M*QLLFHFPLRNQRQSQINPSLQKQYKVLS
Sbjct: 272 M*QLLFHFPLRNQRQSQINPSLQKQYKVLS 183
Score = 184 bits (396), Expect(3) = 5e-080
Identities = 81/92 (88%), Positives = 84/92 (91%)
Frame = -1 / -2
Query: 505 TVDADI*SIVCLYMLLKTSSKIICITNITLNKY*RWNSKISVKFAIFFLN*CSNFSSIFL 326
TVDADI*S V +YMLLKT KIICITNI LNK R NSKIS+KFAIFFLN*CSNFSSIFL
Sbjct: 424 TVDADI*STVSVYMLLKTCGKIICITNIALNK*TRRNSKISMKFAIFFLN*CSNFSSIFL 245
Query: 325 *EINDSHK*TPPCKSNTKCFPDAGGAAGDERR 230
*EINDSHK*TPPCKSNTKCFPDAGGAAG+ERR
Sbjct: 244 *EINDSHK*TPPCKSNTKCFPDAGGAAGNERR 149
Score = 130 bits (278), Expect(3) = 5e-080
Identities = 51/56 (91%), Positives = 53/56 (94%)
Frame = -1 / -2
Query: 730 TPFCRTIYGIEEHRIKTCR*TNVYYDTGLLLVSHYLTCNASTINDSNKVHINSMPP 563
TPFCRTIYGI EHRIKTCR*TN+YYDT LLLVSHYLTC+ STINDSNKVHINSMPP
Sbjct: 649 TPFCRTIYGIIEHRIKTCR*TNIYYDTRLLLVSHYLTCDTSTINDSNKVHINSMPP 482
Score = 109 bits (232), Expect(5) = 5e-065
Identities = 46/54 (85%), Positives = 50/54 (92%)
Frame = +1 / +1
Query: 409 IC*V*C**CR*SCCLF*EACTDIQWTRYLHQLCWNC**NTSL**YI*WN*NMEA 570
IC*V C**CR*SC +F*EACT ++WTRYLHQLCWNC *NTSL**YI*WN*N+EA
Sbjct: 328 IC*VRC**CR*SCRMF*EACTHLRWTRYLHQLCWNCQ*NTSL**YI*WN*NVEA 489
Score = 104 bits (222), Expect(3) = 2e-039
Identities = 51/76 (67%), Positives = 54/76 (71%)
Frame = +3 / +3
Query: 318 ISQRKMEEKLLH*FKKKIANFTEILEFHLQYXXXXXXXXXXXXXXXXRSMYRHTMD*ISA 497
ISQRKMEEKLLH*FKKK+ANF EILEF L Y RSMY T+D*ISA
Sbjct: 237 ISQRKMEEKLLH*FKKKMANFMEILEFRLVYLLSAMLVMQIILPHVLRSMYTLTVD*ISA 416
Query: 498 STVLELLIKH*FMMIH 545
STVLEL IKH*F+MIH
Sbjct: 417 STVLELPIKH*FIMIH 464
Score = 84.5 bits (178), Expect(5) = 5e-065
Identities = 34/43 (79%), Positives = 37/43 (86%)
Frame = +1 / +1
Query: 601 *WYSHCKSNNAKPKEARCHNKHWFSGRSLSYVPRSRI*CGKRG 729
*WYS+ KSNNA+PKEA CHNK+WFSGRSLSYV S I*C KRG
Sbjct: 520 *WYSYRKSNNARPKEAWCHNKYWFSGRSLSYVL*SHI*CDKRG 648
Score = 81.7 bits (172), Expect(5) = 5e-065
Identities = 29/29 (100%), Positives = 29/29 (100%)
Frame = +1 / +1
Query: 265 ESTLYCFCKEGFICDCR*FLRGKWKRSCY 351
ESTLYCFCKEGFICDCR*FLRGKWKRSCY
Sbjct: 184 ESTLYCFCKEGFICDCR*FLRGKWKRSCY 270
Score = 75.3 bits (158), Expect(3) = 2e-039
Identities = 35/38 (92%), Positives = 35/38 (92%)
Frame = +3 / +3
Query: 618 QVK*CETKRSPVS**TLVQRQVFILCSSIPYIVRQKGV 731
QVK*CETKRS VS** LVQRQVFILCS IPYIVRQKGV
Sbjct: 537 QVK*CETKRSLVS**ILVQRQVFILCSMIPYIVRQKGV 650
Score = 30.4 bits (60), Expect(2) = e-115
Identities = 15/20 (75%), Positives = 15/20 (75%)
Frame = +1 / +2
Query: 115 ASSRFASRTSRLRRCDSSAA 174
ASSRFASRTS LR SS A
Sbjct: 47 ASSRFASRTSPLRFLSSSTA 106
Score = 27.2 bits (53), Expect(3) = e-104
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = -1 / -1
Query: 145 AKCEMRSGTR 116
AKCEMRSGTR
Sbjct: 77 AKCEMRSGTR 48
Score = 25.8 bits (50), Expect(5) = 5e-065
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = +3 / +1
Query: 117 LVPLRISHFA 146
LVPLRISHFA
Sbjct: 49 LVPLRISHFA 78
Score = 25.4 bits (49), Expect(3) = 2e-039
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = +1 / +2
Query: 91 RQFRVPAGASSRFASRTSR 147
RQFRVPAGA + +SR
Sbjct: 2 RQFRVPAGALYLYPIASSR 58
Score = 24.4 bits (47), Expect(3) = 5e-080
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = -3 / -3
Query: 113 PAGTRNCR 90
PAGTRNCR
Sbjct: 24 PAGTRNCR 1
Score = 24.4 bits (47), Expect(3) = e-104
Identities = 8/10 (80%), Positives = 10/10 (100%)
Frame = -2 / -2
Query: 120 RGSGRHAELP 91
+G+GRHAELP
Sbjct: 31 QGTGRHAELP 2
Score = 23.5 bits (45), Expect(5) = 5e-065
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +1 / +3
Query: 148 LRRCDSSAA 174
LRRCDSSAA
Sbjct: 72 LRRCDSSAA 98
>gb|CB927024.1|CB927024 ABA1_11_H06.g1_A012 Abscisic acid-treated seedlings Sorghum bicolor
cDNA clone ABA1_11_H06_A012 5', mRNA sequence
Length = 597
Score = 344 bits (746), Expect(3) = e-100
Identities = 142/152 (93%), Positives = 147/152 (96%)
Frame = +2 / +3
Query: 191 HPCAGEMELKPGMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVATLVQKEN 370
HP AGEMELKPGMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVATLVQKEN
Sbjct: 141 HPRAGEMELKPGMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVATLVQKEN 320
Query: 371 SKFHGDLRIPSSIFVKCDVSNADNLAACFEKHVQTYNGLDICINCAGIANKTLVYDDTSD 550
KFHGDLR+PS +FVKCDVSNADNLAACFEKHV TY GLDICINCAGIANKTLVY+DTSD
Sbjct: 321 GKFHGDLRVPSCLFVKCDVSNADNLAACFEKHVHTYGGLDICINCAGIANKTLVYNDTSD 500
Query: 551 GTRTWRHAVNVNLVAVIDGTRIASQIMRNQKK 646
GTRTWRHAVNVNLVAV+DGTRIASQIMR+QKK
Sbjct: 501 GTRTWRHAVNVNLVAVVDGTRIASQIMRDQKK 596
Score = 312 bits (676), Expect(3) = 2e-090
Identities = 140/152 (92%), Positives = 143/152 (94%)
Frame = -2 / -3
Query: 645 FFWFRII*LAMRVPSMTATRFTLTACLHVLVPSDVSS*TSVLLAIPAQLMQISSPLYVCT 466
FFW RII*LA+RVPS TATRFTLTACLHVLVPSDVS *TSVLLAIPAQLMQISSP VCT
Sbjct: 595 FFWSRII*LAIRVPSTTATRFTLTACLHVLVPSDVSL*TSVLLAIPAQLMQISSPP*VCT 416
Query: 465 CFSKQAARLSALLTSHLTNIEDGILRSP*NLLFSF*TNVATSLPFSSEKSTTVTNKPLLA 286
CFSK AARLSALLTSHLTN +DG LRSP*NL FSF*TNVATSLPFSSEKSTTVTNKPLLA
Sbjct: 415 CFSKHAARLSALLTSHLTNKQDGTLRSP*NLPFSF*TNVATSLPFSSEKSTTVTNKPLLA 236
Query: 285 KAIQSAFPMPEAPPVTSADMPGLSSISPAQGW 190
KAIQSAFPMPEAPPVTSADMPGLSSISPA+GW
Sbjct: 235 KAIQSAFPMPEAPPVTSADMPGLSSISPARGW 140
Score = 223 bits (482), Expect(2) = 2e-060
Identities = 100/128 (78%), Positives = 104/128 (81%)
Frame = -3 / -1
Query: 647 ASFGFALFDLQCEYXXXXXXXXXXXHASMF*FHQMYHHKLVFY*QFQHS*CRYLVHCMSV 468
ASFG ALFDL+ EY HAS F*FHQMYH+KLVFY QFQHS*CRYLVH V
Sbjct: 597 ASFGLALFDLRYEYHQRQQQGSH*QHASTF*FHQMYHYKLVFYWQFQHS*CRYLVHHKCV 418
Query: 467 HASQNKQQDYLHY*HHT*QILKMEF*DLREICYFLFELM*QLLFHFPLRNQRQSQINPSL 288
HASQN +QDYLHY*H T*QI K E *DL EIC+FLFELM*QLLFHFPLRNQRQSQINPSL
Sbjct: 417 HASQNMRQDYLHY*HRT*QINKTEL*DLHEICHFLFELM*QLLFHFPLRNQRQSQINPSL 238
Query: 287 QKQYKVLS 264
QKQYKVLS
Sbjct: 237 QKQYKVLS 214
Score = 183 bits (395), Expect(3) = 1e-063
Identities = 80/92 (86%), Positives = 84/92 (91%)
Frame = -1 / -2
Query: 505 TVDADI*SIVCLYMLLKTSSKIICITNITLNKY*RWNSKISVKFAIFFLN*CSNFSSIFL 326
TVDADI*S + +YMLLKT KIICITNI LNK R NSKIS+KFAIFFLN*CSNFSSIFL
Sbjct: 455 TVDADI*STISVYMLLKTCGKIICITNIALNK*TRRNSKISMKFAIFFLN*CSNFSSIFL 276
Query: 325 *EINDSHK*TPPCKSNTKCFPDAGGAAGDERR 230
*EINDSHK*TPPCKSNTKCFPDAGGAAG+ERR
Sbjct: 275 *EINDSHK*TPPCKSNTKCFPDAGGAAGNERR 180
Score = 107 bits (229), Expect(6) = 1e-053
Identities = 46/54 (85%), Positives = 49/54 (90%)
Frame = +1 / +2
Query: 409 IC*V*C**CR*SCCLF*EACTDIQWTRYLHQLCWNC**NTSL**YI*WN*NMEA 570
IC*V C**CR*SC +F*EACT + WTRYLHQLCWNC *NTSL**YI*WN*N+EA
Sbjct: 359 IC*VRC**CR*SCRMF*EACTHLWWTRYLHQLCWNCQ*NTSL**YI*WN*NVEA 520
Score = 101 bits (216), Expect(3) = 1e-025
Identities = 50/76 (65%), Positives = 53/76 (69%)
Frame = +3 / +1
Query: 318 ISQRKMEEKLLH*FKKKIANFTEILEFHLQYXXXXXXXXXXXXXXXXRSMYRHTMD*ISA 497
ISQRKMEEKLLH*FKKK+ANF EILEF L Y RSMY +D*ISA
Sbjct: 268 ISQRKMEEKLLH*FKKKMANFMEILEFRLVYLLSAMLVMQIILPHVLRSMYTLMVD*ISA 447
Query: 498 STVLELLIKH*FMMIH 545
STVLEL IKH*F+MIH
Sbjct: 448 STVLELPIKH*FIMIH 495
Score = 81.7 bits (172), Expect(6) = 1e-053
Identities = 29/29 (100%), Positives = 29/29 (100%)
Frame = +1 / +2
Query: 265 ESTLYCFCKEGFICDCR*FLRGKWKRSCY 351
ESTLYCFCKEGFICDCR*FLRGKWKRSCY
Sbjct: 215 ESTLYCFCKEGFICDCR*FLRGKWKRSCY 301
Score = 66.6 bits (139), Expect(3) = 1e-063
Identities = 26/28 (92%), Positives = 27/28 (96%)
Frame = -1 / -2
Query: 646 LLLVSHYLTCNASTINDSNKVHINSMPP 563
LLLVSHYLTC+ STINDSNKVHINSMPP
Sbjct: 596 LLLVSHYLTCDTSTINDSNKVHINSMPP 513
Score = 34.1 bits (68), Expect(3) = 2e-090
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = -3 / -3
Query: 113 PAGTRNCRGRSG 78
PAGTRNCRGRSG
Sbjct: 61 PAGTRNCRGRSG 26
Score = 33.6 bits (67), Expect(3) = 1e-063
Identities = 11/14 (78%), Positives = 13/14 (92%)
Frame = -2 / -2
Query: 120 RGSGRHAELPRPKW 79
+G+GRHAELPR KW
Sbjct: 68 QGTGRHAELPREKW 27
Score = 33.1 bits (66), Expect(6) = 1e-053
Identities = 12/15 (80%), Positives = 14/15 (93%)
Frame = +1 / +2
Query: 601 *WYSHCKSNNAKPKE 645
*WYS+ KSNNA+PKE
Sbjct: 551 *WYSYRKSNNARPKE 595
Score = 32.7 bits (65), Expect(2) = 2e-060
Identities = 14/19 (73%), Positives = 15/19 (78%)
Frame = -1 / -1
Query: 130 RSGTRLRPARGTAEAEVGK 74
R GTR R ARGTAE EVG+
Sbjct: 78 RLGTRHRQARGTAEGEVGE 22
Score = 32.2 bits (64), Expect(3) = e-100
Identities = 14/19 (73%), Positives = 14/19 (73%)
Frame = +1 / +3
Query: 79 PLRPRQFRVPAGASSRFAS 135
PL PRQFRVPAGA AS
Sbjct: 27 PLLPRQFRVPAGALYPIAS 83
Score = 31.8 bits (63), Expect(3) = 1e-025
Identities = 14/19 (73%), Positives = 15/19 (78%)
Frame = +3 / +2
Query: 78 PTSASAVPRAGRSLVPLRI 134
PTS SAVPRA R LVP R+
Sbjct: 26 PTSPSAVPRACRCLVPNRL 82
Score = 31.3 bits (62), Expect(6) = 1e-053
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = +2 / +1
Query: 77 PHFGLGSSACRPEP 118
PHF LGSSAC P P
Sbjct: 25 PHFSLGSSACLPVP 66
Score = 30.4 bits (60), Expect(3) = e-100
Identities = 15/20 (75%), Positives = 15/20 (75%)
Frame = +1 / +3
Query: 115 ASSRFASRTSRLRRCDSSAA 174
ASSRFASRTS LR SS A
Sbjct: 78 ASSRFASRTSPLRFLSSSTA 137
Score = 27.2 bits (53), Expect(3) = 2e-090
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = -1 / -1
Query: 145 AKCEMRSGTR 116
AKCEMRSGTR
Sbjct: 108 AKCEMRSGTR 79
Score = 25.8 bits (50), Expect(6) = 1e-053
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = +3 / +2
Query: 117 LVPLRISHFA 146
LVPLRISHFA
Sbjct: 80 LVPLRISHFA 109
Score = 24.9 bits (48), Expect(3) = 1e-025
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = +3 / +1
Query: 618 QVK*CETKRS 647
QVK*CETKRS
Sbjct: 568 QVK*CETKRS 597
Score = 23.5 bits (45), Expect(6) = 1e-053
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +1 / +1
Query: 148 LRRCDSSAA 174
LRRCDSSAA
Sbjct: 103 LRRCDSSAA 129
>gb|BG103846.1|BG103846 RHIZ2_37_E06.b1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 490
Score = 284 bits (615), Expect(2) = 1e-078
Identities = 117/124 (94%), Positives = 120/124 (96%)
Frame = +2 / +1
Query: 191 HPCAGEMELKPGMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVATLVQKEN 370
HP AGEMELKPGMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVATLVQKEN
Sbjct: 118 HPRAGEMELKPGMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVATLVQKEN 297
Query: 371 SKFHGDLRIPSSIFVKCDVSNADNLAACFEKHVQTYNGLDICINCAGIANKTLVYDDTSD 550
KFHGDLR+PSS+FVKCDVSNADNLAACFEKHV TY GLDICINCAGIANKTLVY+DTSD
Sbjct: 298 GKFHGDLRVPSSLFVKCDVSNADNLAACFEKHVHTYGGLDICINCAGIANKTLVYNDTSD 477
Query: 551 GTRT 562
GTRT
Sbjct: 478 GTRT 489
Score = 255 bits (552), Expect(2) = 6e-069
Identities = 116/124 (93%), Positives = 117/124 (94%)
Frame = -2 / -3
Query: 561 VLVPSDVSS*TSVLLAIPAQLMQISSPLYVCTCFSKQAARLSALLTSHLTNIEDGILRSP 382
VLVPSDVS *TSVLLAIPAQLMQISSP VCTCFSK AARLSALLTSHLTN EDG LRSP
Sbjct: 488 VLVPSDVSL*TSVLLAIPAQLMQISSPP*VCTCFSKHAARLSALLTSHLTNKEDGTLRSP 309
Query: 381 *NLLFSF*TNVATSLPFSSEKSTTVTNKPLLAKAIQSAFPMPEAPPVTSADMPGLSSISP 202
*NL FSF*TNVATSLPFSSEKSTTVTNKPLLAKAIQSAFPMPEAPPVTSADMPGLSSISP
Sbjct: 308 *NLPFSF*TNVATSLPFSSEKSTTVTNKPLLAKAIQSAFPMPEAPPVTSADMPGLSSISP 129
Query: 201 AQGW 190
A+GW
Sbjct: 128 ARGW 117
Score = 202 bits (435), Expect = 7e-051
Identities = 86/99 (86%), Positives = 89/99 (89%)
Frame = -3 / -1
Query: 560 F*FHQMYHHKLVFY*QFQHS*CRYLVHCMSVHASQNKQQDYLHY*HHT*QILKMEF*DLR 381
F*FHQMYH+KLVFY QFQHS*CRYLVH VHASQN +QDYLHY*H T*QI K E *DL
Sbjct: 487 F*FHQMYHYKLVFYWQFQHS*CRYLVHRKCVHASQNMRQDYLHY*HRT*QIKKTEL*DLH 308
Query: 380 EICYFLFELM*QLLFHFPLRNQRQSQINPSLQKQYKVLS 264
EIC+FLFELM*QLLFHFPLRNQRQSQINPSLQKQYKVLS
Sbjct: 307 EICHFLFELM*QLLFHFPLRNQRQSQINPSLQKQYKVLS 191
Score = 184 bits (396), Expect = 2e-045
Identities = 81/92 (88%), Positives = 84/92 (91%)
Frame = -1 / -2
Query: 505 TVDADI*SIVCLYMLLKTSSKIICITNITLNKY*RWNSKISVKFAIFFLN*CSNFSSIFL 326
TVDADI*S V +YMLLKT KIICITNI LNK R NSKIS+KFAIFFLN*CSNFSSIFL
Sbjct: 432 TVDADI*STVSVYMLLKTCGKIICITNIALNK*RRRNSKISMKFAIFFLN*CSNFSSIFL 253
Query: 325 *EINDSHK*TPPCKSNTKCFPDAGGAAGDERR 230
*EINDSHK*TPPCKSNTKCFPDAGGAAG+ERR
Sbjct: 252 *EINDSHK*TPPCKSNTKCFPDAGGAAGNERR 157
Score = 105 bits (225), Expect(4) = 2e-044
Identities = 45/53 (84%), Positives = 48/53 (90%)
Frame = +1 / +3
Query: 403 FNIC*V*C**CR*SCCLF*EACTDIQWTRYLHQLCWNC**NTSL**YI*WN*N 561
F IC*V C**CR*SC +F*EACT ++WTRYLHQLCWNC *NTSL**YI*WN*N
Sbjct: 330 FFIC*VRC**CR*SCRMF*EACTHLRWTRYLHQLCWNCQ*NTSL**YI*WN*N 488
Score = 104 bits (222), Expect = 2e-021
Identities = 51/76 (67%), Positives = 54/76 (71%)
Frame = +3 / +2
Query: 318 ISQRKMEEKLLH*FKKKIANFTEILEFHLQYXXXXXXXXXXXXXXXXRSMYRHTMD*ISA 497
ISQRKMEEKLLH*FKKK+ANF EILEF L Y RSMY T+D*ISA
Sbjct: 245 ISQRKMEEKLLH*FKKKMANFMEILEFRLLYLLSAMLVMQIILPHVLRSMYTLTVD*ISA 424
Query: 498 STVLELLIKH*FMMIH 545
STVLEL IKH*F+MIH
Sbjct: 425 STVLELPIKH*FIMIH 472
Score = 81.7 bits (172), Expect(4) = 2e-044
Identities = 29/29 (100%), Positives = 29/29 (100%)
Frame = +1 / +3
Query: 265 ESTLYCFCKEGFICDCR*FLRGKWKRSCY 351
ESTLYCFCKEGFICDCR*FLRGKWKRSCY
Sbjct: 192 ESTLYCFCKEGFICDCR*FLRGKWKRSCY 278
Score = 30.4 bits (60), Expect(2) = 1e-078
Identities = 15/20 (75%), Positives = 15/20 (75%)
Frame = +1 / +1
Query: 115 ASSRFASRTSRLRRCDSSAA 174
ASSRFASRTS LR SS A
Sbjct: 55 ASSRFASRTSPLRFLSSSTA 114
Score = 27.2 bits (53), Expect(2) = 6e-069
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = -1 / -1
Query: 145 AKCEMRSGTR 116
AKCEMRSGTR
Sbjct: 85 AKCEMRSGTR 56
Score = 25.8 bits (50), Expect(4) = 2e-044
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = +3 / +3
Query: 117 LVPLRISHFA 146
LVPLRISHFA
Sbjct: 57 LVPLRISHFA 86
Score = 23.5 bits (45), Expect(4) = 2e-044
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +1 / +2
Query: 148 LRRCDSSAA 174
LRRCDSSAA
Sbjct: 80 LRRCDSSAA 106
>gb|BH245472.1|BH245472 pSB0705 S. bicolor BTx623 PstI-digested total genomic DNA library
Sorghum bicolor genomic clone pSB0705 similar to ARP
protein; alcohol dehydrogenase homology (S57614), DNA
sequence
Length = 601
Score = 121 bits (259), Expect = 1e-026
Identities = 49/63 (77%), Positives = 52/63 (82%)
Frame = +2 / -2
Query: 431 NADNLAACFEKHVQTYNGLDICINCAGIANKTLVYDDTSDGTRTWRHAVNVNLVAVIDGT 610
+ D LAA F KHV T+ GLDICINCAG NK+LVYDD SDGT TWR AVNVNLVAVIDGT
Sbjct: 231 HVDALAAAFRKHVDTFGGLDICINCAGFVNKSLVYDDKSDGTSTWRRAVNVNLVAVIDGT 52
Query: 611 RIA 619
RIA
Sbjct: 51 RIA 43
Score = 95.5 bits (202), Expect = 9e-019
Identities = 47/66 (71%), Positives = 50/66 (75%)
Frame = -2 / +2
Query: 618 AMRVPSMTATRFTLTACLHVLVPSDVSS*TSVLLAIPAQLMQISSPLYVCTCFSKQAARL 439
AMRVPS+TATRFT TA L V VPSD+SS*T+ LL PAQLMQISSP V TCF K AAR
Sbjct: 44 AMRVPSITATRFTFTARLQVEVPSDLSS*TNDLLTNPAQLMQISSPPNVSTCFRKAAARA 223
Query: 438 SALLTS 421
S TS
Sbjct: 224 STCQTS 241
Score = 76.2 bits (160), Expect = 6e-013
Identities = 33/63 (52%), Positives = 40/63 (63%)
Frame = -3 / +3
Query: 620 LQCEYXXXXXXXXXXXHASMF*FHQMYHHKLVFY*QFQHS*CRYLVHCMSVHASQNKQQD 441
LQCEY HAS + FHQ+YH K + Y*Q QHS*CRYLVH H S+ +QQ+
Sbjct: 42 LQCEYHR*QQQDSHLQHASKWKFHQIYHRKPMIY*QIQHS*CRYLVHQTCPHVSEKQQQE 221
Query: 440 YLH 432
+LH
Sbjct: 222 HLH 230
Score = 67.0 bits (140), Expect = 3e-010
Identities = 28/46 (60%), Positives = 31/46 (67%)
Frame = +1 / -1
Query: 433 CR*SCCLF*EACTDIQWTRYLHQLCWNC**NTSL**YI*WN*NMEA 570
CR SCC F E C + WTRYLHQLCW C * L * I*WN ++EA
Sbjct: 229 CRCSCCCFSETCGHVWWTRYLHQLCWICQ*IIGLR**I*WNFHLEA 92
Score = 39.1 bits (79), Expect(2) = 2e-005
Identities = 14/19 (73%), Positives = 17/19 (89%)
Frame = -1 / +1
Query: 619 CNASTINDSNKVHINSMPP 563
CNASTI++SNK+HI S PP
Sbjct: 43 CNASTIDNSNKIHIYSTPP 99
Score = 35.0 bits (70), Expect = 1.5
Identities = 16/28 (57%), Positives = 21/28 (75%)
Frame = +3 / -3
Query: 462 SMYRHTMD*ISASTVLELLIKH*FMMIH 545
+M+ +D*ISASTVL+L I H F MI+
Sbjct: 200 NMWTRLVD*ISASTVLDLSINHWFTMIN 117
Score = 30.4 bits (60), Expect(2) = 2e-005
Identities = 15/27 (55%), Positives = 20/27 (74%)
Frame = -1 / +1
Query: 505 TVDADI*SIVCLYMLLKTSSKIICITN 425
TVDADI*S ++M K+SSK I ++N
Sbjct: 157 TVDADI*STKRVHMFPKSSSKSIYMSN 237
>gb|CW359301.1|CW359301 fsbb001f026n21k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f026n21, DNA
sequence
Length = 717
Score = 121 bits (259), Expect = 1e-026
Identities = 49/63 (77%), Positives = 52/63 (82%)
Frame = +2 / +1
Query: 431 NADNLAACFEKHVQTYNGLDICINCAGIANKTLVYDDTSDGTRTWRHAVNVNLVAVIDGT 610
+ D LAA F KHV T+ GLDICINCAG NK+LVYDD SDGT TWR AVNVNLVAVIDGT
Sbjct: 127 HVDALAAAFRKHVDTFGGLDICINCAGFVNKSLVYDDKSDGTSTWRRAVNVNLVAVIDGT 306
Query: 611 RIA 619
RIA
Sbjct: 307 RIA 315
Score = 95.5 bits (202), Expect = 9e-019
Identities = 47/66 (71%), Positives = 50/66 (75%)
Frame = -2 / -2
Query: 618 AMRVPSMTATRFTLTACLHVLVPSDVSS*TSVLLAIPAQLMQISSPLYVCTCFSKQAARL 439
AMRVPS+TATRFT TA L V VPSD+SS*T+ LL PAQLMQISSP V TCF K AAR
Sbjct: 314 AMRVPSITATRFTFTARLQVEVPSDLSS*TNDLLTNPAQLMQISSPPNVSTCFRKAAARA 135
Query: 438 SALLTS 421
S TS
Sbjct: 134 STCQTS 117
Score = 76.2 bits (160), Expect = 6e-013
Identities = 33/63 (52%), Positives = 40/63 (63%)
Frame = -3 / -3
Query: 620 LQCEYXXXXXXXXXXXHASMF*FHQMYHHKLVFY*QFQHS*CRYLVHCMSVHASQNKQQD 441
LQCEY HAS + FHQ+YH K + Y*Q QHS*CRYLVH H S+ +QQ+
Sbjct: 316 LQCEYHR*QQQDSHLQHASKWKFHQIYHRKPMIY*QIQHS*CRYLVHQTCPHVSEKQQQE 137
Query: 440 YLH 432
+LH
Sbjct: 136 HLH 128
Score = 67.0 bits (140), Expect = 3e-010
Identities = 28/46 (60%), Positives = 31/46 (67%)
Frame = +1 / +3
Query: 433 CR*SCCLF*EACTDIQWTRYLHQLCWNC**NTSL**YI*WN*NMEA 570
CR SCC F E C + WTRYLHQLCW C * L * I*WN ++EA
Sbjct: 129 CRCSCCCFSETCGHVWWTRYLHQLCWICQ*IIGLR**I*WNFHLEA 266
Score = 39.1 bits (79), Expect(2) = 2e-005
Identities = 14/19 (73%), Positives = 17/19 (89%)
Frame = -1 / -1
Query: 619 CNASTINDSNKVHINSMPP 563
CNASTI++SNK+HI S PP
Sbjct: 315 CNASTIDNSNKIHIYSTPP 259
Score = 35.0 bits (70), Expect = 1.5
Identities = 16/28 (57%), Positives = 21/28 (75%)
Frame = +3 / +2
Query: 462 SMYRHTMD*ISASTVLELLIKH*FMMIH 545
+M+ +D*ISASTVL+L I H F MI+
Sbjct: 158 NMWTRLVD*ISASTVLDLSINHWFTMIN 241
Score = 30.4 bits (60), Expect(2) = 2e-005
Identities = 15/27 (55%), Positives = 20/27 (74%)
Frame = -1 / -1
Query: 505 TVDADI*SIVCLYMLLKTSSKIICITN 425
TVDADI*S ++M K+SSK I ++N
Sbjct: 201 TVDADI*STKRVHMFPKSSSKSIYMSN 121
>gb|CW359300.1|CW359300 fsbb001f026n21f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f026n21, DNA
sequence
Length = 658
Score = 69.8 bits (146), Expect(2) = 1e-023
Identities = 27/36 (75%), Positives = 31/36 (86%)
Frame = +2 / -1
Query: 620 SQIMRNQKKPGVIINIGSAAGLYPMFLDPVYSAAKG 727
SQ+MR+QKKPGVIINIGS AG+YPM +PVYS KG
Sbjct: 460 SQVMRSQKKPGVIINIGSVAGIYPMSYEPVYSGTKG 353
Score = 63.4 bits (132), Expect(2) = 1e-023
Identities = 24/26 (92%), Positives = 26/26 (100%)
Frame = +2 / -3
Query: 725 GGVVMFTRSLSPLKRHGVRVNVLCPE 802
GGVVMFTRSL+PLKRHG+RVNVLCPE
Sbjct: 92 GGVVMFTRSLAPLKRHGIRVNVLCPE 15
Score = 59.3 bits (123), Expect(2) = 2e-017
Identities = 24/37 (64%), Positives = 26/37 (70%)
Frame = -2 / +3
Query: 738 ITTPPFAALYTGSRNIG*RPAAEPMFIMTPGFFWFRI 628
+ PF LYTGS IG PA EP+FIMTPGFFW RI
Sbjct: 342 VRNKPFVPLYTGS*LIGYMPATEPIFIMTPGFFWDRI 452
Score = 53.3 bits (110), Expect(2) = 2e-017
Identities = 19/27 (70%), Positives = 22/27 (81%)
Frame = -1 / +3
Query: 802 LWAEHIDTNTMAFQWRK*SCKHNHTPF 722
L A++IDTN M QW K*SCKHNHTP+
Sbjct: 15 LRAQYIDTNAMPLQWSK*SCKHNHTPY 95
Score = 51.5 bits (106), Expect(2) = 8e-008
Identities = 18/25 (72%), Positives = 19/25 (76%)
Frame = +1 / -2
Query: 724 RGCGYVYKITFSIETPWCSCQCALP 798
RGCGYVYKIT S E W SCQC +P
Sbjct: 93 RGCGYVYKITCSTEAAWHSCQCTVP 19
Score = 51.5 bits (106), Expect(2) = 9e-013
Identities = 21/26 (80%), Positives = 22/26 (84%)
Frame = -2 / +1
Query: 801 SGQSTLTRTPWRFNGESDLVNITTPP 724
SG STLTR P RF+G SDLVNITTPP
Sbjct: 16 SGHSTLTRMPCRFSGASDLVNITTPP 93
Score = 46.9 bits (96), Expect = 4e-004
Identities = 18/24 (75%), Positives = 19/24 (79%)
Frame = +3 / -1
Query: 726 GVWLCLQDHFLH*NAMVFVSMCSA 797
GVWLCLQDH LH*+ M FVSM A
Sbjct: 91 GVWLCLQDHLLH*SGMAFVSMYCA 20
Score = 45.1 bits (92), Expect(2) = 9e-013
Identities = 19/34 (55%), Positives = 21/34 (61%)
Frame = -1 / +2
Query: 724 FCRTIYGIEEHRIKTCR*TNVYYDTGLLLVSHYL 623
FC I+ HRI * N+YYDT LLL SHYL
Sbjct: 356 FCPAIHWFIAHRIYASN*ANIYYDTRLLLGSHYL 457
Score = 41.4 bits (84), Expect = 0.018
Identities = 20/51 (39%), Positives = 30/51 (58%)
Frame = +1 / -3
Query: 604 WYSHCKSNNAKPKEARCHNKHWFSGRSLSYVPRSRI*CGKRGCGYVYKITF 756
++S S+NA P+EA CHNK+W S +SY + +* KR Y +I +
Sbjct: 476 FFSTKVSSNAIPEEAWCHNKYWLSCWHISYEL*TSV*RDKRFVSYSRQIYY 324
Score = 28.1 bits (55), Expect(2) = 8e-008
Identities = 18/43 (41%), Positives = 24/43 (55%)
Frame = +3 / -2
Query: 621 VK*CETKRSPVS**TLVQRQVFILCSSIPYIVRQKGVWLCLQD 749
+K*C+ +RS VS** L Q +IL + I QK +L D
Sbjct: 459 LK*CDPRRSLVS**ILAQLLAYIL*AMNQCIAGQKVCFLLKTD 331
>gb|CW070781.1|CW070781 104_323_10591245_116_30454 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10591245, DNA
sequence
Length = 558
Score = 63.4 bits (132), Expect(3) = 1e-016
Identities = 24/25 (96%), Positives = 25/25 (100%)
Frame = -2 / +3
Query: 264 PMPEAPPVTSADMPGLSSISPAQGW 190
PMPEAPPVTSADMPGLSSISPA+GW
Sbjct: 135 PMPEAPPVTSADMPGLSSISPARGW 209
Score = 60.6 bits (126), Expect(3) = 6e-016
Identities = 25/26 (96%), Positives = 25/26 (96%)
Frame = +2 / -3
Query: 191 HPCAGEMELKPGMSALVTGGASGIGK 268
HP AGEMELKPGMSALVTGGASGIGK
Sbjct: 208 HPRAGEMELKPGMSALVTGGASGIGK 131
Score = 34.1 bits (68), Expect(3) = 1e-016
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = -3 / +3
Query: 113 PAGTRNCRGRSG 78
PAGTRNCRGRSG
Sbjct: 294 PAGTRNCRGRSG 329
Score = 33.6 bits (67), Expect(2) = 0.008
Identities = 11/14 (78%), Positives = 13/14 (92%)
Frame = -2 / +2
Query: 120 RGSGRHAELPRPKW 79
+G+GRHAELPR KW
Sbjct: 287 QGTGRHAELPREKW 328
Score = 32.7 bits (65), Expect = 7.4
Identities = 14/23 (60%), Positives = 16/23 (69%)
Frame = +1 / -3
Query: 79 PLRPRQFRVPAGASSRFASRTSR 147
PL PRQFRVPAGA + +SR
Sbjct: 328 PLLPRQFRVPAGALYLYPIASSR 260
Score = 31.3 bits (62), Expect(3) = 6e-016
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = +2 / -1
Query: 77 PHFGLGSSACRPEP 118
PHF LGSSAC P P
Sbjct: 330 PHFSLGSSACLPVP 289
Score = 30.4 bits (60), Expect(3) = 6e-016
Identities = 15/20 (75%), Positives = 15/20 (75%)
Frame = +1 / -3
Query: 115 ASSRFASRTSRLRRCDSSAA 174
ASSRFASRTS LR SS A
Sbjct: 271 ASSRFASRTSPLRFLSSSTA 212
Score = 27.2 bits (53), Expect(3) = 1e-016
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = -1 / +1
Query: 145 AKCEMRSGTR 116
AKCEMRSGTR
Sbjct: 241 AKCEMRSGTR 270
Score = 26.7 bits (52), Expect(3) = 0.049
Identities = 12/15 (80%), Positives = 12/15 (80%)
Frame = +3 / -2
Query: 78 PTSASAVPRAGRSLV 122
PTS SAVPRA R LV
Sbjct: 329 PTSPSAVPRACRCLV 285
Score = 26.7 bits (52), Expect(2) = 0.008
Identities = 10/11 (90%), Positives = 11/11 (100%)
Frame = -1 / +2
Query: 262 DAGGAAGDERR 230
DAGGAAG+ERR
Sbjct: 137 DAGGAAGNERR 169
Score = 25.8 bits (50), Expect(3) = 0.049
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = +3 / -2
Query: 117 LVPLRISHFA 146
LVPLRISHFA
Sbjct: 269 LVPLRISHFA 240
Score = 23.5 bits (45), Expect(3) = 0.049
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +1 / -1
Query: 148 LRRCDSSAA 174
LRRCDSSAA
Sbjct: 246 LRRCDSSAA 220
>gb|BE362229.1|BE362229 DG1_85_D09.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 558
Score = 50.1 bits (103), Expect(2) = 3e-012
Identities = 22/51 (43%), Positives = 29/51 (56%)
Frame = +2 / +3
Query: 200 AGEMELKPGMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVAT 352
A + + G A++TGGASGIGKA F R G V + D ++ G VAT
Sbjct: 156 AADSQRLAGKVAVITGGASGIGKATAAEFVRNGARVIIADVQDDLGHAVAT 308
Score = 44.1 bits (90), Expect = 0.003
Identities = 20/45 (44%), Positives = 27/45 (60%)
Frame = -2 / -3
Query: 357 TNVATSLPFSSEKSTTVTNKPLLAKAIQSAFPMPEAPPVTSADMP 223
++VAT+ P SS S +T P L + AFP+P APPV +A P
Sbjct: 313 SSVATACPRSSWTSAMMTLAPFLTNSAAVAFPIPLAPPVITATFP 179
Score = 42.8 bits (87), Expect(2) = 3e-012
Identities = 20/74 (27%), Positives = 37/74 (50%)
Frame = +2 / +3
Query: 410 FVKCDVSNADNLAACFEKHVQTYNGLDICINCAGIANKTLVYDDTSDGTRTWRHAVNVNL 589
+ +CDV++ +AA + VQ + LD+ N AGI Y + + ++VN
Sbjct: 333 YTRCDVTDEAQVAAAVDLAVQLHGRLDVMYNNAGIGGDMAAYSLGAIDLTDFDRVMDVNA 512
Query: 590 VAVIDGTRIASQIM 631
V+ G + A+++M
Sbjct: 513 RGVLAGVKHAARVM 554
>gb|CW070780.1|CW070780 104_323_10591245_116_30436 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10591245, DNA
sequence
Length = 281
Score = 63.4 bits (132), Expect(2) = 2e-011
Identities = 24/25 (96%), Positives = 25/25 (100%)
Frame = -2 / +3
Query: 264 PMPEAPPVTSADMPGLSSISPAQGW 190
PMPEAPPVTSADMPGLSSISPA+GW
Sbjct: 135 PMPEAPPVTSADMPGLSSISPARGW 209
Score = 60.6 bits (126), Expect(3) = 1e-010
Identities = 25/26 (96%), Positives = 25/26 (96%)
Frame = +2 / -2
Query: 191 HPCAGEMELKPGMSALVTGGASGIGK 268
HP AGEMELKPGMSALVTGGASGIGK
Sbjct: 208 HPRAGEMELKPGMSALVTGGASGIGK 131
Score = 25.8 bits (50), Expect(2) = 2e-011
Identities = 9/10 (90%), Positives = 10/10 (100%)
Frame = -1 / +1
Query: 145 AKCEMRSGTR 116
AKCEMR+GTR
Sbjct: 241 AKCEMRNGTR 270
Score = 24.0 bits (46), Expect(3) = 1e-010
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = +3 / -1
Query: 117 LVPLRISHFA 146
LVP RISHFA
Sbjct: 269 LVPFRISHFA 240
Score = 18.9 bits (35), Expect(3) = 1e-010
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = +1 / -3
Query: 148 LRRCDSSAA 174
LRR DSSAA
Sbjct: 246 LRRSDSSAA 220
>gb|BG560142.1|BG560142 RHIZ2_69_G12.b1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 604
Score = 51.0 bits (105), Expect(2) = 9e-010
Identities = 22/52 (42%), Positives = 31/52 (59%)
Frame = +2 / +3
Query: 224 GMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVATLVQKENSKF 379
G A++TGGASGIGKA F R G V + D ++ G VAT + E +++
Sbjct: 303 GKVAVITGGASGIGKATAAEFVRNGARVIIADVQDDLGHAVATELGAEAARY 458
Score = 44.1 bits (90), Expect = 0.003
Identities = 20/45 (44%), Positives = 27/45 (60%)
Frame = -2 / -1
Query: 357 TNVATSLPFSSEKSTTVTNKPLLAKAIQSAFPMPEAPPVTSADMP 223
++VAT+ P SS S +T P L + AFP+P APPV +A P
Sbjct: 436 SSVATACPRSSWTSAMMTLAPFLTNSAAVAFPIPLAPPVITATFP 302
Score = 33.1 bits (66), Expect(2) = 9e-010
Identities = 14/43 (32%), Positives = 25/43 (58%)
Frame = +2 / +3
Query: 386 DLRIPSSIFVKCDVSNADNLAACFEKHVQTYNGLDICINCAGI 514
+L ++ + +CDV++ +AA + VQ + LD+ N AGI
Sbjct: 432 ELGAEAARYARCDVTDEAQVAAAVDLAVQLHGRLDVMYNNAGI 560
>gb|CX607235.1|CX607235 ANR1_7_A06.g1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_7_A06_A002 5', mRNA sequence
Length = 816
Score = 50.1 bits (103), Expect(2) = 2e-009
Identities = 22/51 (43%), Positives = 29/51 (56%)
Frame = +2 / +3
Query: 200 AGEMELKPGMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVAT 352
A + + G A++TGGASGIGKA F R G V + D ++ G VAT
Sbjct: 147 AADSQRLAGKVAVITGGASGIGKATAAEFVRNGARVIIADVQDDLGHAVAT 299
Score = 44.1 bits (90), Expect = 0.003
Identities = 20/45 (44%), Positives = 27/45 (60%)
Frame = -2 / -3
Query: 357 TNVATSLPFSSEKSTTVTNKPLLAKAIQSAFPMPEAPPVTSADMP 223
++VAT+ P SS S +T P L + AFP+P APPV +A P
Sbjct: 304 SSVATACPRSSWTSAMMTLAPFLTNSAAVAFPIPLAPPVITATFP 170
Score = 32.7 bits (65), Expect(2) = 2e-009
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = +2 / +3
Query: 410 FVKCDVSNADNLAACFEKHVQTYNGLDICINCAGI 514
+ +CDV++ +AA + VQ + LD+ N AGI
Sbjct: 324 YTRCDVTDEAQVAAAVDLAVQLHGRLDVMYNNAGI 428
>gb|CN148035.1|CN148035 WOUND1_53_G05.g1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_53_G05_A002 5', mRNA sequence
Length = 799
Score = 50.1 bits (103), Expect(2) = 2e-009
Identities = 22/51 (43%), Positives = 29/51 (56%)
Frame = +2 / +2
Query: 200 AGEMELKPGMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVAT 352
A + + G A++TGGASGIGKA F R G V + D ++ G VAT
Sbjct: 161 AADSQRLAGKVAVITGGASGIGKATAAEFVRNGARVIIADVQDDLGHAVAT 313
Score = 44.1 bits (90), Expect = 0.003
Identities = 20/45 (44%), Positives = 27/45 (60%)
Frame = -2 / -2
Query: 357 TNVATSLPFSSEKSTTVTNKPLLAKAIQSAFPMPEAPPVTSADMP 223
++VAT+ P SS S +T P L + AFP+P APPV +A P
Sbjct: 318 SSVATACPRSSWTSAMMTLAPFLTNSAAVAFPIPLAPPVITATFP 184
Score = 32.7 bits (65), Expect(2) = 2e-009
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = +2 / +2
Query: 410 FVKCDVSNADNLAACFEKHVQTYNGLDICINCAGI 514
+ +CDV++ +AA + VQ + LD+ N AGI
Sbjct: 338 YTRCDVTDEAQVAAAVDLAVQLHGRLDVMYNNAGI 442
>gb|CN149285.1|CN149285 WOUND1_61_G04.g1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_61_G04_A002 5', mRNA sequence
Length = 776
Score = 50.1 bits (103), Expect(2) = 2e-009
Identities = 22/51 (43%), Positives = 29/51 (56%)
Frame = +2 / +3
Query: 200 AGEMELKPGMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVAT 352
A + + G A++TGGASGIGKA F R G V + D ++ G VAT
Sbjct: 108 AADSQRLAGKVAVITGGASGIGKATAAEFVRNGARVIIADVQDDLGHAVAT 260
Score = 44.1 bits (90), Expect = 0.003
Identities = 20/45 (44%), Positives = 27/45 (60%)
Frame = -2 / -2
Query: 357 TNVATSLPFSSEKSTTVTNKPLLAKAIQSAFPMPEAPPVTSADMP 223
++VAT+ P SS S +T P L + AFP+P APPV +A P
Sbjct: 265 SSVATACPRSSWTSAMMTLAPFLTNSAAVAFPIPLAPPVITATFP 131
Score = 32.7 bits (65), Expect(2) = 2e-009
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = +2 / +3
Query: 410 FVKCDVSNADNLAACFEKHVQTYNGLDICINCAGI 514
+ +CDV++ +AA + VQ + LD+ N AGI
Sbjct: 285 YTRCDVTDEAQVAAAVDLAVQLHGRLDVMYNNAGI 389
>gb|CN142049.1|CN142049 WOUND1_3_C03.g1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_3_C03_A002 5', mRNA sequence
Length = 729
Score = 50.1 bits (103), Expect(2) = 2e-009
Identities = 22/51 (43%), Positives = 29/51 (56%)
Frame = +2 / +1
Query: 200 AGEMELKPGMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVAT 352
A + + G A++TGGASGIGKA F R G V + D ++ G VAT
Sbjct: 178 AADSQRLAGKVAVITGGASGIGKATAAEFVRNGARVIIADVQDDLGHAVAT 330
Score = 44.1 bits (90), Expect = 0.003
Identities = 20/45 (44%), Positives = 27/45 (60%)
Frame = -2 / -2
Query: 357 TNVATSLPFSSEKSTTVTNKPLLAKAIQSAFPMPEAPPVTSADMP 223
++VAT+ P SS S +T P L + AFP+P APPV +A P
Sbjct: 335 SSVATACPRSSWTSAMMTLAPFLTNSAAVAFPIPLAPPVITATFP 201
Score = 32.7 bits (65), Expect(2) = 2e-009
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = +2 / +1
Query: 410 FVKCDVSNADNLAACFEKHVQTYNGLDICINCAGI 514
+ +CDV++ +AA + VQ + LD+ N AGI
Sbjct: 355 YTRCDVTDEAQVAAAVDLAVQLHGRLDVMYNNAGI 459
>gb|CB927599.1|CB927599 ABA1_26_C06.g1_A012 Abscisic acid-treated seedlings Sorghum bicolor
cDNA clone ABA1_26_C06_A012 5', mRNA sequence
Length = 501
Score = 50.1 bits (103), Expect(2) = 2e-009
Identities = 22/51 (43%), Positives = 29/51 (56%)
Frame = +2 / +1
Query: 200 AGEMELKPGMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVAT 352
A + + G A++TGGASGIGKA F R G V + D ++ G VAT
Sbjct: 157 AADSQRLAGKVAVITGGASGIGKATAAEFVRNGARVIIADVQDDLGHAVAT 309
Score = 44.1 bits (90), Expect = 0.003
Identities = 20/45 (44%), Positives = 27/45 (60%)
Frame = -2 / -2
Query: 357 TNVATSLPFSSEKSTTVTNKPLLAKAIQSAFPMPEAPPVTSADMP 223
++VAT+ P SS S +T P L + AFP+P APPV +A P
Sbjct: 314 SSVATACPRSSWTSAMMTLAPFLTNSAAVAFPIPLAPPVITATFP 180
Score = 32.7 bits (65), Expect(2) = 2e-009
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = +2 / +1
Query: 410 FVKCDVSNADNLAACFEKHVQTYNGLDICINCAGI 514
+ +CDV++ +AA + VQ + LD+ N AGI
Sbjct: 334 YTRCDVTDEAQVAAAVDLAVQLHGRLDVMYNNAGI 438
>gb|CW484304.1|CW484304 fsbb001f246g05k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f246g05, DNA
sequence
Length = 553
Score = 49.2 bits (101), Expect(2) = 3e-009
Identities = 21/42 (50%), Positives = 26/42 (61%)
Frame = +2 / +2
Query: 224 GMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVA 349
G A++TGGASGIGKA F R G V + D ++ GR VA
Sbjct: 206 GKVAVITGGASGIGKATAAEFVRNGARVIIADVQDDLGRAVA 331
Score = 41.4 bits (84), Expect = 0.018
Identities = 19/44 (43%), Positives = 25/44 (56%)
Frame = -2 / -2
Query: 354 NVATSLPFSSEKSTTVTNKPLLAKAIQSAFPMPEAPPVTSADMP 223
+ AT+ P SS S +T P L + AFP+P APPV +A P
Sbjct: 336 SAATARPRSSWTSAMMTLAPFLTNSAAVAFPIPLAPPVITATFP 205
Score = 33.1 bits (66), Expect(2) = 3e-009
Identities = 15/43 (34%), Positives = 24/43 (55%)
Frame = +2 / +2
Query: 386 DLRIPSSIFVKCDVSNADNLAACFEKHVQTYNGLDICINCAGI 514
DL ++ + CDV++ +AA + VQ + LD+ N AGI
Sbjct: 335 DLGPDAARYAHCDVTDEAQVAAAVDLAVQLHGRLDVMFNNAGI 463
>gb|CL180837.1|CL180837 104_391_10896308_116_31928_068 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10896308, DNA
sequence
Length = 731
Score = 49.2 bits (101), Expect(2) = 4e-009
Identities = 21/43 (48%), Positives = 26/43 (60%)
Frame = +2 / +2
Query: 224 GMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVAT 352
G A++TGGASGIGKA F R G V + D ++ G VAT
Sbjct: 296 GKVAVITGGASGIGKATAAEFVRNGARVIIADVQDDLGHAVAT 424
Score = 44.1 bits (90), Expect = 0.003
Identities = 20/45 (44%), Positives = 27/45 (60%)
Frame = -2 / -3
Query: 357 TNVATSLPFSSEKSTTVTNKPLLAKAIQSAFPMPEAPPVTSADMP 223
++VAT+ P SS S +T P L + AFP+P APPV +A P
Sbjct: 429 SSVATACPRSSWTSAMMTLAPFLTNSAAVAFPIPLAPPVITATFP 295
Score = 32.7 bits (65), Expect(2) = 4e-009
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = +2 / +2
Query: 410 FVKCDVSNADNLAACFEKHVQTYNGLDICINCAGI 514
+ +CDV++ +AA + VQ + LD+ N AGI
Sbjct: 449 YTRCDVTDEAQVAAAVDLAVQLHGRLDVMYNNAGI 553
>gb|BE592617.1|BE592617 WS1_95_H02.b1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 547
Score = 47.8 bits (98), Expect(2) = 6e-009
Identities = 20/61 (32%), Positives = 33/61 (54%)
Frame = +2 / +2
Query: 164 PQQLLDRSTHPCAGEMELKPGMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGRE 343
P+ + + P + + G ALVTGGA+GIG+A+ F G V + D +E G++
Sbjct: 83 PETMAAAGSSPSSSSSKRLEGKVALVTGGATGIGEAIVRLFTEHGAKVCIADIQDEAGQQ 262
Query: 344 V 346
+
Sbjct: 263 L 265
Score = 34.5 bits (69), Expect = 2.1
Identities = 18/38 (47%), Positives = 18/38 (47%)
Frame = -2 / -2
Query: 336 PFSSEKSTTVTNKPLLAKAIQSAFPMPEAPPVTSADMP 223
P SS S T P K A PMP APPVT A P
Sbjct: 255 PASSWMSAMQTLAPCSVKRRTMASPMPVAPPVTRATFP 142
Score = 33.6 bits (67), Expect(2) = 6e-009
Identities = 10/36 (27%), Positives = 23/36 (63%)
Frame = +2 / +2
Query: 407 IFVKCDVSNADNLAACFEKHVQTYNGLDICINCAGI 514
+FV CDV++ ++++ + + + LD+ +N AG+
Sbjct: 299 MFVHCDVTSEEDVSRAVDAAAERFGALDVMVNNAGV 406
>gb|AW923985.1|AW923985 WS1_32_F10.b1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 488
Score = 47.8 bits (98), Expect(2) = 6e-009
Identities = 20/61 (32%), Positives = 33/61 (54%)
Frame = +2 / +1
Query: 164 PQQLLDRSTHPCAGEMELKPGMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGRE 343
P+ + + P + + G ALVTGGA+GIG+A+ F G V + D +E G++
Sbjct: 82 PETMAAAGSSPSSSSSKRLEGKVALVTGGATGIGEAIVRLFTEHGAKVCIADIQDEAGQQ 261
Query: 344 V 346
+
Sbjct: 262 L 264
Score = 34.5 bits (69), Expect = 2.1
Identities = 18/38 (47%), Positives = 18/38 (47%)
Frame = -2 / -1
Query: 336 PFSSEKSTTVTNKPLLAKAIQSAFPMPEAPPVTSADMP 223
P SS S T P K A PMP APPVT A P
Sbjct: 254 PASSWMSAMQTLAPCSVKRRTMASPMPVAPPVTRATFP 141
Score = 33.6 bits (67), Expect(2) = 6e-009
Identities = 10/36 (27%), Positives = 23/36 (63%)
Frame = +2 / +1
Query: 407 IFVKCDVSNADNLAACFEKHVQTYNGLDICINCAGI 514
+FV CDV++ ++++ + + + LD+ +N AG+
Sbjct: 298 MFVHCDVTSEEDVSRAVDAAAERFGALDVMVNNAGV 405
>gb|CW235244.1|CW235244 104_690_11214878_148_37412_055 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11214878, DNA
sequence
Length = 686
Score = 51.9 bits (107), Expect(2) = 8e-009
Identities = 22/50 (44%), Positives = 30/50 (60%)
Frame = +2 / +1
Query: 224 GMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVATLVQKENS 373
G A++TGGASGIGKA F R G V + D ++ GR VA + +N+
Sbjct: 262 GKVAVITGGASGIGKATAAEFVRNGARVVIADIQDDLGRAVAAELGPDNA 411
Score = 40.9 bits (83), Expect = 0.024
Identities = 20/51 (39%), Positives = 26/51 (50%)
Frame = -2 / -1
Query: 357 TNVATSLPFSSEKSTTVTNKPLLAKAIQSAFPMPEAPPVTSADMPGLSSIS 205
++ AT+ P SS S T P L + A PMP APPV +A P I+
Sbjct: 395 SSAATARPRSSWMSAMTTLAPFLTNSAAVALPMPLAPPVMTATFPASLQIN 243
Score = 29.0 bits (57), Expect(2) = 8e-009
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = +2 / +1
Query: 410 FVKCDVSNADNLAACFEKHVQTYNGLDICINCAGI 514
+ CDV++ +AA + V + LD+ N AGI
Sbjct: 418 YTHCDVADEAQVAAAVDLAVARHGQLDVMFNNAGI 522
>gb|CW342254.1|CW342254 104_844_11486775_116_36177_064 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11486775, DNA
sequence
Length = 685
Score = 51.9 bits (107), Expect(2) = 8e-009
Identities = 22/50 (44%), Positives = 30/50 (60%)
Frame = +2 / -2
Query: 224 GMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVATLVQKENS 373
G A++TGGASGIGKA F R G V + D ++ GR VA + +N+
Sbjct: 333 GKVAVITGGASGIGKATAAEFVRNGARVVIADIQDDLGRAVAAELGPDNA 184
Score = 40.9 bits (83), Expect = 0.024
Identities = 20/51 (39%), Positives = 26/51 (50%)
Frame = -2 / +2
Query: 357 TNVATSLPFSSEKSTTVTNKPLLAKAIQSAFPMPEAPPVTSADMPGLSSIS 205
++ AT+ P SS S T P L + A PMP APPV +A P I+
Sbjct: 200 SSAATARPRSSWMSAMTTLAPFLTNSAAVALPMPLAPPVMTATFPASLQIN 352
Score = 29.0 bits (57), Expect(2) = 8e-009
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = +2 / -2
Query: 410 FVKCDVSNADNLAACFEKHVQTYNGLDICINCAGI 514
+ CDV++ +AA + V + LD+ N AGI
Sbjct: 177 YTHCDVADEAQVAAAVDLAVARHGQLDVMFNNAGI 73
>gb|BG412262.1|BG412262 OV2_39_G11.b1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA
sequence
Length = 512
Score = 51.9 bits (107), Expect(2) = 8e-009
Identities = 22/50 (44%), Positives = 30/50 (60%)
Frame = +2 / +2
Query: 224 GMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVATLVQKENS 373
G A++TGGASGIGKA F R G V + D ++ GR VA + +N+
Sbjct: 224 GKVAVITGGASGIGKATAAEFVRNGARVVIADIQDDLGRAVAAELGPDNA 373
Score = 40.5 bits (82), Expect = 0.033
Identities = 19/45 (42%), Positives = 24/45 (53%)
Frame = -2 / -3
Query: 357 TNVATSLPFSSEKSTTVTNKPLLAKAIQSAFPMPEAPPVTSADMP 223
++ AT+ P SS S T P L + A PMP APPV +A P
Sbjct: 357 SSAATARPRSSWMSAMTTLAPFLTNSAAVALPMPLAPPVMTATFP 223
Score = 29.0 bits (57), Expect(2) = 8e-009
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = +2 / +2
Query: 410 FVKCDVSNADNLAACFEKHVQTYNGLDICINCAGI 514
+ CDV++ +AA + V + LD+ N AGI
Sbjct: 380 YTHCDVADEAQVAAAVDLAVARHGQLDVMFNNAGI 484
>gb|BG054172.1|BG054172 OV2_2_B09.b1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA sequence
Length = 506
Score = 51.9 bits (107), Expect(2) = 8e-009
Identities = 22/50 (44%), Positives = 30/50 (60%)
Frame = +2 / +1
Query: 224 GMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVATLVQKENS 373
G A++TGGASGIGKA F R G V + D ++ GR VA + +N+
Sbjct: 232 GKVAVITGGASGIGKATAAEFVRNGARVVIADIQDDLGRAVAAELGPDNA 381
Score = 40.5 bits (82), Expect = 0.033
Identities = 19/45 (42%), Positives = 24/45 (53%)
Frame = -2 / -1
Query: 357 TNVATSLPFSSEKSTTVTNKPLLAKAIQSAFPMPEAPPVTSADMP 223
++ AT+ P SS S T P L + A PMP APPV +A P
Sbjct: 365 SSAATARPRSSWMSAMTTLAPFLTNSAAVALPMPLAPPVMTATFP 231
Score = 29.0 bits (57), Expect(2) = 8e-009
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = +2 / +1
Query: 410 FVKCDVSNADNLAACFEKHVQTYNGLDICINCAGI 514
+ CDV++ +AA + V + LD+ N AGI
Sbjct: 388 YTHCDVADEAQVAAAVDLAVARHGQLDVMFNNAGI 492
>gb|CW034218.1|CW034218 104_264_10502423_114_30358 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10502423, DNA
sequence
Length = 439
Score = 47.8 bits (98), Expect(2) = 1e-008
Identities = 20/40 (50%), Positives = 25/40 (62%)
Frame = +2 / -3
Query: 233 ALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVAT 352
A++TGGASGIGKA F R G V + D ++ G VAT
Sbjct: 437 AVITGGASGIGKATAAEFVRNGARVIIADVQDDLGHAVAT 318
Score = 41.4 bits (84), Expect = 0.018
Identities = 19/42 (45%), Positives = 26/42 (61%)
Frame = -2 / +1
Query: 357 TNVATSLPFSSEKSTTVTNKPLLAKAIQSAFPMPEAPPVTSA 232
++VAT+ P SS S +T P L + AFP+P APPV +A
Sbjct: 313 SSVATACPRSSWTSAMMTLAPFLTNSAAVAFPIPLAPPVITA 438
Score = 32.7 bits (65), Expect(2) = 1e-008
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = +2 / -3
Query: 410 FVKCDVSNADNLAACFEKHVQTYNGLDICINCAGI 514
+ +CDV++ +AA + VQ + LD+ N AGI
Sbjct: 293 YTRCDVTDEAQVAAAVDLAVQLHGRLDVMYNNAGI 189
>gb|CW260769.1|CW260769 104_727_11229143_116_35195_086 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11229143, DNA
sequence
Length = 597
Score = 46.4 bits (95), Expect(2) = 3e-008
Identities = 20/52 (38%), Positives = 29/52 (55%)
Frame = +2 / +1
Query: 224 GMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVATLVQKENSKF 379
G A++TGGASGIGKA F R G V + D + G VA + + +++
Sbjct: 43 GKVAVITGGASGIGKATAAEFVRNGARVIIADVQDGLGHSVAAQLGPDAARY 198
Score = 40.0 bits (81), Expect = 0.046
Identities = 19/42 (45%), Positives = 22/42 (52%)
Frame = -2 / -2
Query: 348 ATSLPFSSEKSTTVTNKPLLAKAIQSAFPMPEAPPVTSADMP 223
AT P S S +T P L + AFPMP APPV +A P
Sbjct: 167 ATEWPRPSWTSAMMTLAPFLTNSAAVAFPMPLAPPVITATFP 42
Score = 32.7 bits (65), Expect(2) = 3e-008
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = +2 / +1
Query: 410 FVKCDVSNADNLAACFEKHVQTYNGLDICINCAGI 514
+V CDV++ +AA + V+ + LD+ N AGI
Sbjct: 196 YVHCDVTDEAQVAAAVDLAVEVHGRLDVMFNNAGI 300
>gb|CW265099.1|CW265099 104_734_11231675_116_35257_044 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11231675, DNA
sequence
Length = 646
Score = 47.8 bits (98), Expect(2) = 1e-007
Identities = 21/50 (42%), Positives = 29/50 (58%)
Frame = +2 / +1
Query: 224 GMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVATLVQKENS 373
G A++TGGASGI KA F R G V + D ++ GR VA + +N+
Sbjct: 364 GKVAVITGGASGICKATAAEFVRNGARVVIADIQDDLGRAVAAELGPDNA 513
Score = 29.5 bits (58), Expect(2) = 1e-007
Identities = 12/39 (30%), Positives = 21/39 (53%)
Frame = +2 / +1
Query: 410 FVKCDVSNADNLAACFEKHVQTYNGLDICINCAGIANKT 526
+ C+V++ ++AA + V + LD+ N AGI T
Sbjct: 520 YTHCNVADEAHVAAAVDLAVARHGQLDVMFNNAGITGST 636
>gb|CW303507.1|CW303507 104_788_11465276_148_35698_080 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11465276, DNA
sequence
Length = 563
Score = 44.1 bits (90), Expect(2) = 1e-007
Identities = 18/41 (43%), Positives = 26/41 (63%)
Frame = +2 / +2
Query: 224 GMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREV 346
G ALVTGGA+GIG+A+ F G V + D +E G+++
Sbjct: 302 GKVALVTGGATGIGEAIVRLFTEHGAKVCIADIQDEAGQQL 424
Score = 34.5 bits (69), Expect = 2.1
Identities = 18/38 (47%), Positives = 18/38 (47%)
Frame = -2 / -3
Query: 336 PFSSEKSTTVTNKPLLAKAIQSAFPMPEAPPVTSADMP 223
P SS S T P K A PMP APPVT A P
Sbjct: 414 PASSWMSAMQTLAPCSVKRRTMASPMPVAPPVTRATFP 301
Score = 32.7 bits (65), Expect(2) = 1e-007
Identities = 10/35 (28%), Positives = 22/35 (62%)
Frame = +2 / +2
Query: 407 IFVKCDVSNADNLAACFEKHVQTYNGLDICINCAG 511
+FV CDV++ ++++ + + + LD+ +N AG
Sbjct: 458 MFVHCDVTSEEDVSRALDAAAERFGALDVMVNNAG 562
>gb|CN138418.1|CN138418 OX1_63_E01.g1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_63_E01_A002 5', mRNA sequence
Length = 709
Score = 41.4 bits (84), Expect(2) = 2e-007
Identities = 17/58 (29%), Positives = 33/58 (56%)
Frame = +2 / +3
Query: 344 VATLVQKENSKFHGDLRIPSSIFVKCDVSNADNLAACFEKHVQTYNGLDICINCAGIA 517
VA + + ++ D+ ++ + CDV++ D++AA + V T+ LDI N AG++
Sbjct: 135 VADIQDEAGARVCADVGAGAASYFHCDVTSEDDVAAAVDHAVATFGALDIMFNNAGVS 308
Score = 40.9 bits (83), Expect(2) = 7e-004
Identities = 18/41 (43%), Positives = 22/41 (53%)
Frame = +2 / +3
Query: 224 GMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREV 346
G A++TGGASGIG+ F G V V D +E G V
Sbjct: 48 GKVAMITGGASGIGERTVRLFVEHGARVVVADIQDEAGARV 170
Score = 35.0 bits (70), Expect(2) = 2e-007
Identities = 20/73 (27%), Positives = 31/73 (42%)
Frame = +2 / +3
Query: 533 YDDTSDGTRTWRHAVNVNLVAVIDGTRIASQIMRNQKKPGVIINIGSAAGLYPMFLDPVY 712
Y G + + VNLV GT+ A+++M ++ G II S A Y
Sbjct: 321 YSVRDSGKADFERVLAVNLVGPFLGTKHAARVMVPARRGGCIIGTSSVAAAVTGASSYAY 500
Query: 713 SAAKGGVVMFTRS 751
+ AK +V T +
Sbjct: 501 ACAKRALVALTEN 539
Score = 34.1 bits (68), Expect = 2.8
Identities = 17/45 (37%), Positives = 20/45 (44%)
Frame = -2 / -1
Query: 357 TNVATSLPFSSEKSTTVTNKPLLAKAIQSAFPMPEAPPVTSADMP 223
T+ T P SS S T T P + P+P APPV A P
Sbjct: 181 TSAQTRAPASSWMSATTTRAPCSTNSRTVRSPIPLAPPVIMATFP 47
Score = 25.4 bits (49), Expect(2) = 7e-004
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = +2 / +3
Query: 716 AAKGGVVMFTRSLSPLKRHGVRVNVLCP 799
A + V + + + L RHG+RVN + P
Sbjct: 507 AKRALVALTENAAAELGRHGIRVNCVSP 590
>gb|CW182784.1|CW182784 104_598_11164264_116_36670_058 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11164264, DNA
sequence
Length = 602
Score = 41.4 bits (84), Expect(2) = 2e-007
Identities = 17/58 (29%), Positives = 33/58 (56%)
Frame = +2 / -2
Query: 344 VATLVQKENSKFHGDLRIPSSIFVKCDVSNADNLAACFEKHVQTYNGLDICINCAGIA 517
VA + + ++ D+ ++ + CDV++ D++AA + V T+ LDI N AG++
Sbjct: 580 VADIQDEAGARVCADVGAGAASYFHCDVTSEDDVAAAVDHAVATFGALDIMFNNAGVS 407
Score = 35.0 bits (70), Expect(2) = 2e-007
Identities = 20/73 (27%), Positives = 31/73 (42%)
Frame = +2 / -2
Query: 533 YDDTSDGTRTWRHAVNVNLVAVIDGTRIASQIMRNQKKPGVIINIGSAAGLYPMFLDPVY 712
Y G + + VNLV GT+ A+++M ++ G II S A Y
Sbjct: 394 YSVRDSGKADFERVLAVNLVGPFLGTKHAARVMVPARRGGCIIGTSSVAAAVTGASSYAY 215
Query: 713 SAAKGGVVMFTRS 751
+ AK +V T +
Sbjct: 214 ACAKRALVALTEN 176
>gb|CW054346.1|CW054346 104_295_10516471_115_30179 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10516471, DNA
sequence
Length = 302
Score = 57.9 bits (120), Expect = 2e-007
Identities = 19/28 (67%), Positives = 20/28 (71%)
Frame = +1 / -2
Query: 433 CR*SCCLF*EACTDIQWTRYLHQLCWNC 516
CR SCC F E C + WTRYLHQLCW C
Sbjct: 97 CRCSCCCFWETCGHVWWTRYLHQLCWIC 14
Score = 57.9 bits (120), Expect = 2e-007
Identities = 22/33 (66%), Positives = 25/33 (75%)
Frame = +2 / -3
Query: 431 NADNLAACFEKHVQTYNGLDICINCAGIANKTL 529
+ D LAA F KHV T+ GLDICINCAG NK+L
Sbjct: 99 HVDALAAAFGKHVDTFGGLDICINCAGFVNKSL 1
Score = 51.5 bits (106), Expect = 2e-005
Identities = 20/32 (62%), Positives = 24/32 (75%)
Frame = -3 / +3
Query: 527 VFY*QFQHS*CRYLVHCMSVHASQNKQQDYLH 432
+ Y*Q QHS*CRYLVH H SQ +QQ++LH
Sbjct: 3 MIY*QIQHS*CRYLVHQTCPHVSQKQQQEHLH 98
Score = 47.3 bits (97), Expect = 3e-004
Identities = 23/34 (67%), Positives = 23/34 (67%)
Frame = -2 / +2
Query: 522 LLAIPAQLMQISSPLYVCTCFSKQAARLSALLTS 421
LL PAQLMQISSP V TCF K AAR S TS
Sbjct: 8 LLTNPAQLMQISSPPNVSTCFPKAAARASTCQTS 109
>gb|BG465653.1|BG465653 RHIZ2_47_B01.b1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 496
Score = 45.5 bits (93), Expect(2) = 3e-007
Identities = 20/42 (47%), Positives = 25/42 (59%)
Frame = +2 / +3
Query: 224 GMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVA 349
G A++TG ASGIGKA F R G V + D ++ GR VA
Sbjct: 183 GKVAVITGPASGIGKATAAEFVRNGAKVIIADVQDDLGRAVA 308
Score = 29.9 bits (59), Expect(2) = 3e-007
Identities = 11/38 (28%), Positives = 22/38 (57%)
Frame = +2 / +3
Query: 401 SSIFVKCDVSNADNLAACFEKHVQTYNGLDICINCAGI 514
++ + +CDV++ +AA + V + LD+ N AG+
Sbjct: 327 AACYTRCDVTDEAQVAAAVDLAVGLHGRLDVMFNNAGV 440
>gb|CW271599.1|CW271599 104_743_11403084_148_35343_034 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11403084, DNA
sequence
Length = 594
Score = 39.6 bits (80), Expect(2) = 6e-007
Identities = 15/39 (38%), Positives = 25/39 (64%)
Frame = +2 / +1
Query: 398 PSSIFVKCDVSNADNLAACFEKHVQTYNGLDICINCAGI 514
P++ FV CDV+ D++AA + V + LD+ +N AG+
Sbjct: 352 PNAHFVHCDVAAEDSVAAAVDAAVARHGRLDVMLNSAGV 468
Score = 35.0 bits (70), Expect(2) = 6e-007
Identities = 15/31 (48%), Positives = 19/31 (61%)
Frame = +2 / +1
Query: 224 GMSALVTGGASGIGKALCIAFARRGLFVTVV 316
G AL+TGGASG+GKA F + G V+
Sbjct: 211 GKIALITGGASGLGKAAAHEFIQEGAQAVVL 303
>gb|CW158107.1|CW158107 104_561_11147878_148_36389_083 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11147878, DNA
sequence
Length = 694
Score = 42.3 bits (86), Expect(2) = 8e-007
Identities = 18/38 (47%), Positives = 22/38 (57%)
Frame = +2 / +1
Query: 224 GMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENG 337
G AL+TGGASGIG+ F + G V V D +E G
Sbjct: 427 GKVALITGGASGIGECTARLFVKHGARVVVADIQDEAG 540
Score = 38.2 bits (77), Expect = 0.16
Identities = 18/38 (47%), Positives = 20/38 (52%)
Frame = -2 / -3
Query: 336 PFSSEKSTTVTNKPLLAKAIQSAFPMPEAPPVTSADMP 223
P SS S T T P K+ PMP APPV SA +P
Sbjct: 539 PASSWMSATTTRAPCFTKSRAVHSPMPLAPPVISATLP 426
Score = 31.8 bits (63), Expect(2) = 8e-007
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +2 / +1
Query: 410 FVKCDVSNADNLAACFEKHVQTYNGLDICINCAGI 514
+V CDV+ ++AA + V + LDI N AGI
Sbjct: 583 YVHCDVTVEADVAAAVDHAVARFGALDIMFNNAGI 687
>gb|CW158106.1|CW158106 104_561_11147878_116_36390_083 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11147878, DNA
sequence
Length = 659
Score = 42.3 bits (86), Expect(2) = 8e-007
Identities = 18/38 (47%), Positives = 22/38 (57%)
Frame = +2 / -1
Query: 224 GMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENG 337
G AL+TGGASGIG+ F + G V V D +E G
Sbjct: 362 GKVALITGGASGIGECTARLFVKHGARVVVADIQDEAG 249
Score = 38.2 bits (77), Expect = 0.16
Identities = 18/38 (47%), Positives = 20/38 (52%)
Frame = -2 / +1
Query: 336 PFSSEKSTTVTNKPLLAKAIQSAFPMPEAPPVTSADMP 223
P SS S T T P K+ PMP APPV SA +P
Sbjct: 250 PASSWMSATTTRAPCFTKSRAVHSPMPLAPPVISATLP 363
Score = 31.8 bits (63), Expect(2) = 8e-007
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +2 / -1
Query: 410 FVKCDVSNADNLAACFEKHVQTYNGLDICINCAGI 514
+V CDV+ ++AA + V + LDI N AGI
Sbjct: 206 YVHCDVTVEADVAAAVDHAVARFGALDIMFNNAGI 102
>gb|CW349851.1|CW349851 fsbb001f010o04k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f010o04, DNA
sequence
Length = 523
Score = 43.7 bits (89), Expect(2) = 2e-006
Identities = 20/50 (40%), Positives = 27/50 (54%)
Frame = +2 / +3
Query: 200 AGEMELKPGMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVA 349
A + + G AL+TG ASGIG A F R G V + D ++ GR +A
Sbjct: 222 ADDSQRLAGKVALITGAASGIGAATAREFVRAGAKVVLADVQDDQGRALA 371
Score = 29.5 bits (58), Expect(2) = 2e-006
Identities = 10/35 (28%), Positives = 20/35 (57%)
Frame = +2 / +3
Query: 410 FVKCDVSNADNLAACFEKHVQTYNGLDICINCAGI 514
+ +CDV++ D ++A + V + LD+ AG+
Sbjct: 390 YTRCDVTDEDQVSAAVDLSVARHGALDVAFWNAGV 494
>gb|CD224241.1|CD224241 CCC1_32_B09.g1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_32_B09_A007 5', mRNA sequence
Length = 460
Score = 47.3 bits (97), Expect(2) = 2e-006
Identities = 22/45 (48%), Positives = 27/45 (60%)
Frame = +2 / +3
Query: 224 GMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVATLV 358
G A+VTGGASGIG+A FA G V + D +E G+ VA V
Sbjct: 60 GKVAIVTGGASGIGEAAARLFASSGATVVIADVQDELGQAVAASV 194
Score = 43.7 bits (89), Expect = 0.004
Identities = 22/54 (40%), Positives = 31/54 (57%)
Frame = -2 / -1
Query: 357 TNVATSLPFSSEKSTTVTNKPLLAKAIQSAFPMPEAPPVTSADMPGLSSISPAQ 196
T+ AT+ P SS S T PL A + +A P+P APPVT A +P ++ A+
Sbjct: 193 TDAATACPSSSCTSAITTVAPLDANSRAAASPIPLAPPVTIATLPSNLALDMAE 32
Score = 25.8 bits (50), Expect(2) = 2e-006
Identities = 9/35 (25%), Positives = 20/35 (57%)
Frame = +2 / +3
Query: 410 FVKCDVSNADNLAACFEKHVQTYNGLDICINCAGI 514
+ +CDV++ + A + V + LD+ ++ AG+
Sbjct: 213 YARCDVTDEAQVEATVARVVAAHGRLDVMMSNAGV 317
>gb|BG412301.1|BG412301 OV2_40_C07.b1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA
sequence
Length = 485
Score = 41.4 bits (84), Expect(2) = 7e-006
Identities = 17/58 (29%), Positives = 33/58 (56%)
Frame = +2 / +1
Query: 344 VATLVQKENSKFHGDLRIPSSIFVKCDVSNADNLAACFEKHVQTYNGLDICINCAGIA 517
VA + + ++ D+ ++ + CDV++ D++AA + V T+ LDI N AG++
Sbjct: 145 VADIQDEAGARVCADVGAGAASYFHCDVTSEDDVAAAVDHAVATFGALDIMFNNAGVS 318
Score = 40.9 bits (83), Expect = 0.024
Identities = 18/41 (43%), Positives = 22/41 (53%)
Frame = +2 / +1
Query: 224 GMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREV 346
G A++TGGASGIG+ F G V V D +E G V
Sbjct: 58 GKVAMITGGASGIGERTVRLFVEHGARVVVADIQDEAGARV 180
Score = 34.1 bits (68), Expect = 2.8
Identities = 17/45 (37%), Positives = 20/45 (44%)
Frame = -2 / -1
Query: 357 TNVATSLPFSSEKSTTVTNKPLLAKAIQSAFPMPEAPPVTSADMP 223
T+ T P SS S T T P + P+P APPV A P
Sbjct: 191 TSAQTRAPASSWMSATTTRAPCSTNSRTVRSPIPLAPPVIMATFP 57
Score = 29.5 bits (58), Expect(2) = 7e-006
Identities = 15/49 (30%), Positives = 23/49 (46%)
Frame = +2 / +1
Query: 533 YDDTSDGTRTWRHAVNVNLVAVIDGTRIASQIMRNQKKPGVIINIGSAA 679
Y G + + VNLV GT+ A+++M ++ G II S A
Sbjct: 331 YSVRDSGKADFERVLAVNLVGPFLGTKHAARVMVPARRGGCIIGTSSVA 477
>gb|CW499023.1|CW499023 fsbb001f293j08f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f293j08, DNA
sequence
Length = 616
Score = 37.7 bits (76), Expect(2) = 1e-005
Identities = 20/65 (30%), Positives = 31/65 (47%)
Frame = +2 / -1
Query: 563 WRHAVNVNLVAVIDGTRIASQIMRNQKKPGVIINIGSAAGLYPMFLDPVYSAAKGGVVMF 742
+ ++VNLV GT+ A+++M + G II S A Y+ AK G+V
Sbjct: 457 FERVISVNLVGPFMGTKHAARVMVPAGRGGCIIGTSSLASAVAGAASHAYTCAKRGLVAL 278
Query: 743 TRSLS 757
T + S
Sbjct: 277 TENAS 263
Score = 32.7 bits (65), Expect(2) = 1e-005
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = +2 / -1
Query: 410 FVKCDVSNADNLAACFEKHVQTYNGLDICINCAGIAN 520
+V+CDV+ ++AA + + LDI N AGI +
Sbjct: 607 YVQCDVTVESDVAAAVDHSEARFGALDIMFNTAGIGD 497
>gb|CW342255.1|CW342255 104_844_11486775_148_36178_064 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11486775, DNA
sequence
Length = 666
Score = 51.9 bits (107), Expect = 1e-005
Identities = 22/50 (44%), Positives = 30/50 (60%)
Frame = +2 / +3
Query: 224 GMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVATLVQKENS 373
G A++TGGASGIGKA F R G V + D ++ GR VA + +N+
Sbjct: 480 GKVAVITGGASGIGKATAAEFVRNGARVVIADIQDDLGRAVAAELGPDNA 629
Score = 40.9 bits (83), Expect = 0.024
Identities = 20/51 (39%), Positives = 26/51 (50%)
Frame = -2 / -3
Query: 357 TNVATSLPFSSEKSTTVTNKPLLAKAIQSAFPMPEAPPVTSADMPGLSSIS 205
++ AT+ P SS S T P L + A PMP APPV +A P I+
Sbjct: 613 SSAATARPRSSWMSAMTTLAPFLTNSAAVALPMPLAPPVMTATFPASLQIN 461
>gb|CD221128.1|CD221128 CCC1_73_F09.g1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_73_F09_A007 5', mRNA sequence
Length = 655
Score = 43.7 bits (89), Expect(2) = 2e-005
Identities = 20/50 (40%), Positives = 27/50 (54%)
Frame = +2 / +1
Query: 200 AGEMELKPGMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVA 349
A + + G AL+TG ASGIG A F R G V + D ++ GR +A
Sbjct: 337 ADDSQRLAGKVALITGAASGIGAATAREFVRAGAKVVLADVQDDQGRALA 486
Score = 25.8 bits (50), Expect(2) = 2e-005
Identities = 9/35 (25%), Positives = 19/35 (54%)
Frame = +2 / +1
Query: 410 FVKCDVSNADNLAACFEKHVQTYNGLDICINCAGI 514
+ +CDV++ ++A + V + LD+ AG+
Sbjct: 505 YTRCDVTDEAQVSAAVDLSVARHGALDVAFWNAGV 609
>gb|BE357439.1|BE357439 DG1_15_E09.b2_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 609
Score = 43.7 bits (89), Expect(2) = 2e-005
Identities = 20/50 (40%), Positives = 27/50 (54%)
Frame = +2 / +3
Query: 200 AGEMELKPGMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVA 349
A + + G AL+TG ASGIG A F R G V + D ++ GR +A
Sbjct: 213 ADDSQRLAGKVALITGAASGIGAATAREFVRAGAKVVLADVQDDQGRALA 362
Score = 25.8 bits (50), Expect(2) = 2e-005
Identities = 9/35 (25%), Positives = 19/35 (54%)
Frame = +2 / +3
Query: 410 FVKCDVSNADNLAACFEKHVQTYNGLDICINCAGI 514
+ +CDV++ ++A + V + LD+ AG+
Sbjct: 381 YTRCDVTDEAQVSAAVDLSVARHGALDVAFWNAGV 485
>gb|CW122660.1|CW122660 104_501_11110790_116_34680_053 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11110790, DNA
sequence
Length = 590
Score = 43.7 bits (89), Expect(2) = 2e-005
Identities = 20/50 (40%), Positives = 27/50 (54%)
Frame = +2 / +3
Query: 200 AGEMELKPGMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVA 349
A + + G AL+TG ASGIG A F R G V + D ++ GR +A
Sbjct: 300 ADDSQRLAGKVALITGAASGIGAATAREFVRAGAKVVLADVQDDQGRALA 449
Score = 25.8 bits (50), Expect(2) = 2e-005
Identities = 9/35 (25%), Positives = 19/35 (54%)
Frame = +2 / +3
Query: 410 FVKCDVSNADNLAACFEKHVQTYNGLDICINCAGI 514
+ +CDV++ ++A + V + LD+ AG+
Sbjct: 468 YTRCDVTDEAQVSAAVDLSVARHGALDVAFWNAGV 572
>gb|BE359881.1|BE359881 DG1_58_F03.b2_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 531
Score = 43.7 bits (89), Expect(2) = 2e-005
Identities = 20/50 (40%), Positives = 27/50 (54%)
Frame = +2 / +2
Query: 200 AGEMELKPGMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVA 349
A + + G AL+TG ASGIG A F R G V + D ++ GR +A
Sbjct: 215 ADDSQRLAGKVALITGAASGIGAATAREFVRAGAKVVLADVQDDQGRALA 364
Score = 25.8 bits (50), Expect(2) = 2e-005
Identities = 9/35 (25%), Positives = 19/35 (54%)
Frame = +2 / +2
Query: 410 FVKCDVSNADNLAACFEKHVQTYNGLDICINCAGI 514
+ +CDV++ ++A + V + LD+ AG+
Sbjct: 383 YTRCDVTDEAQVSAAVDLSVARHGALDVAFWNAGV 487
>gb|BZ341344.1|BZ341344 ic44g06.b1 WGS-SbicolorF (JM107 adapted methyl filtered) Sorghum
bicolor genomic clone ic44g06 5', DNA sequence
Length = 356
Score = 43.2 bits (88), Expect(2) = 2e-005
Identities = 19/42 (45%), Positives = 24/42 (57%)
Frame = +2 / -2
Query: 224 GMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVA 349
G AL+TG ASGIG A F R G V + D ++ GR +A
Sbjct: 283 GKVALITGAASGIGAATAREFVRAGAKVVLADVQDDQGRALA 158
Score = 25.8 bits (50), Expect(2) = 2e-005
Identities = 9/35 (25%), Positives = 19/35 (54%)
Frame = +2 / -2
Query: 410 FVKCDVSNADNLAACFEKHVQTYNGLDICINCAGI 514
+ +CDV++ ++A + V + LD+ AG+
Sbjct: 139 YTRCDVTDEAQVSAAVDLSVARHGALDVAFWNAGV 35
>gb|AW283128.2|AW283128 LG1_224_H04.g1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 592
Score = 50.6 bits (104), Expect = 3e-005
Identities = 25/64 (39%), Positives = 35/64 (54%)
Frame = +2 / +2
Query: 575 VNVNLVAVIDGTRIASQIMRNQKKPGVIINIGSAAGLYPMFLDPVYSAAKGGVVMFTRSL 754
+++NL I T+ A KKPG I++I S A P+ P+Y AAK G+ F RSL
Sbjct: 2 LDINLTHPIYATQQAIAHFTENKKPGSIVHISSIAAQGPVLSVPMYCAAKAGISHFVRSL 181
Query: 755 SPLK 766
L+
Sbjct: 182 GGLE 193
>gb|BG054340.1|BG054340 OV2_3_A08.b1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA sequence
Length = 397
Score = 42.3 bits (86), Expect(2) = 6e-005
Identities = 18/38 (47%), Positives = 22/38 (57%)
Frame = +2 / +3
Query: 224 GMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENG 337
G AL+TGGASGIG+ F + G V V D +E G
Sbjct: 141 GKVALITGGASGIGECTARLFVKHGARVVVADIQDEAG 254
Score = 38.2 bits (77), Expect = 0.16
Identities = 18/38 (47%), Positives = 20/38 (52%)
Frame = -2 / -1
Query: 336 PFSSEKSTTVTNKPLLAKAIQSAFPMPEAPPVTSADMP 223
P SS S T T P K+ PMP APPV SA +P
Sbjct: 253 PASSWMSATTTRAPCFTKSRAVHSPMPLAPPVISATLP 140
Score = 25.4 bits (49), Expect(2) = 6e-005
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = +2 / +3
Query: 410 FVKCDVSNADNLAACFEKHVQTYNGLDICINCA 508
+V CDV+ ++AA + V LDI N A
Sbjct: 297 YVHCDVTVEADVAAAVDHAVARVGALDIMFNNA 395
>gb|CW313782.1|CW313782 104_804_11471470_116_35795_093 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11471470, DNA
sequence
Length = 593
Score = 49.2 bits (101), Expect = 8e-005
Identities = 21/43 (48%), Positives = 26/43 (60%)
Frame = +2 / +1
Query: 224 GMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVAT 352
G A++TGGASGIGKA F R G V + D ++ G VAT
Sbjct: 457 GKVAVITGGASGIGKATAAEFVRNGARVIIADVQDDLGHAVAT 585
Score = 44.1 bits (90), Expect = 0.003
Identities = 20/45 (44%), Positives = 27/45 (60%)
Frame = -2 / -1
Query: 357 TNVATSLPFSSEKSTTVTNKPLLAKAIQSAFPMPEAPPVTSADMP 223
++VAT+ P SS S +T P L + AFP+P APPV +A P
Sbjct: 590 SSVATACPRSSWTSAMMTLAPFLTNSAAVAFPIPLAPPVITATFP 456
>gb|CW354343.1|CW354343 fsbb001f017i07f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f017i07, DNA
sequence
Length = 737
Score = 39.1 bits (79), Expect(2) = 8e-005
Identities = 22/56 (39%), Positives = 25/56 (44%)
Frame = +2 / -1
Query: 224 GMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVATLVQKENSKFHGDL 391
G ALVTGG SGIG A+ F + G V + E E TL GDL
Sbjct: 602 GKVALVTGGGSGIGLAIARRFVQEGAHVFITGRREALLAEAVTLTGGRIEAIAGDL 435
Score = 28.1 bits (55), Expect(2) = 8e-005
Identities = 11/43 (25%), Positives = 25/43 (58%)
Frame = +2 / -1
Query: 422 DVSNADNLAACFEKHVQTYNGLDICINCAGIANKTLVYDDTSD 550
D+++AD++A F+ LDI +N +G+A + + +++
Sbjct: 440 DLTSADDVARLFDTVQARAGRLDILVNSSGVAEPASLEETSAE 312
>gb|CW158850.1|CW158850 104_564_11149046_148_36401_051 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11149046, DNA
sequence
Length = 686
Score = 35.0 bits (70), Expect(2) = 1e-004
Identities = 19/63 (30%), Positives = 30/63 (47%)
Frame = +2 / -3
Query: 563 WRHAVNVNLVAVIDGTRIASQIMRNQKKPGVIINIGSAAGLYPMFLDPVYSAAKGGVVMF 742
+ ++VNLV GT+ A+++M + G II S A Y+ AK G+V
Sbjct: 504 FERVLSVNLVGPFLGTKHAARVMVPAGRGGCIIGTSSLASAVAGAASHAYTCAKRGLVAL 325
Query: 743 TRS 751
T +
Sbjct: 324 TEN 316
Score = 31.8 bits (63), Expect(2) = 1e-004
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +2 / -3
Query: 410 FVKCDVSNADNLAACFEKHVQTYNGLDICINCAGI 514
+V CDV+ ++AA + V + LDI N AGI
Sbjct: 654 YVHCDVTVEADVAAAVDHAVARFGALDIMFNNAGI 550
>gb|CW135685.1|CW135685 104_520_11117978_148_34835_009 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11117978, DNA
sequence
Length = 716
Score = 35.4 bits (71), Expect(2) = 3e-004
Identities = 15/30 (50%), Positives = 18/30 (60%)
Frame = +2 / +1
Query: 224 GMSALVTGGASGIGKALCIAFARRGLFVTV 313
G A++TG ASGIGKA F R G V +
Sbjct: 370 GKVAVITGAASGIGKATAAEFVRNGARVII 459
Score = 29.9 bits (59), Expect(2) = 3e-004
Identities = 11/38 (28%), Positives = 22/38 (57%)
Frame = +2 / +1
Query: 401 SSIFVKCDVSNADNLAACFEKHVQTYNGLDICINCAGI 514
++ + +CDV++ +AA + V + LD+ N AG+
Sbjct: 481 AACYTRCDVTDEAQVAAAVDLAVGLHGRLDVMFNNAGV 594
>gb|CW135684.1|CW135684 104_520_11117978_116_34839_009 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11117978, DNA
sequence
Length = 684
Score = 35.4 bits (71), Expect(2) = 3e-004
Identities = 15/30 (50%), Positives = 18/30 (60%)
Frame = +2 / -1
Query: 224 GMSALVTGGASGIGKALCIAFARRGLFVTV 313
G A++TG ASGIGKA F R G V +
Sbjct: 552 GKVAVITGAASGIGKATAAEFVRNGARVII 463
Score = 29.9 bits (59), Expect(2) = 3e-004
Identities = 11/38 (28%), Positives = 22/38 (57%)
Frame = +2 / -1
Query: 401 SSIFVKCDVSNADNLAACFEKHVQTYNGLDICINCAGI 514
++ + +CDV++ +AA + V + LD+ N AG+
Sbjct: 441 AACYTRCDVTDEAQVAAAVDLAVGLHGRLDVMFNNAGV 328
>gb|CW338136.1|CW338136 104_838_11484582_148_36124_025 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11484582, DNA
sequence
Length = 631
Score = 35.4 bits (71), Expect(2) = 3e-004
Identities = 15/30 (50%), Positives = 18/30 (60%)
Frame = +2 / +3
Query: 224 GMSALVTGGASGIGKALCIAFARRGLFVTV 313
G A++TG ASGIGKA F R G V +
Sbjct: 108 GKVAVITGAASGIGKATAAEFVRNGARVII 197
Score = 29.9 bits (59), Expect(2) = 3e-004
Identities = 11/38 (28%), Positives = 22/38 (57%)
Frame = +2 / +3
Query: 401 SSIFVKCDVSNADNLAACFEKHVQTYNGLDICINCAGI 514
++ + +CDV++ +AA + V + LD+ N AG+
Sbjct: 219 AACYTRCDVTDEAQVAAAVDLAVGLHGRLDVMFNNAGV 332
>gb|CW243921.1|CW243921 104_704_11220312_116_37580_086 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11220312, DNA
sequence
Length = 689
Score = 47.3 bits (97), Expect = 3e-004
Identities = 22/45 (48%), Positives = 27/45 (60%)
Frame = +2 / -3
Query: 224 GMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVATLV 358
G A+VTGGASGIG+A FA G V + D +E G+ VA V
Sbjct: 150 GKVAIVTGGASGIGEAAARLFASSGATVVIADVQDELGQAVAASV 16
Score = 42.8 bits (87), Expect = 0.007
Identities = 21/45 (46%), Positives = 27/45 (60%)
Frame = -2 / +2
Query: 357 TNVATSLPFSSEKSTTVTNKPLLAKAIQSAFPMPEAPPVTSADMP 223
T+ AT+ P SS S T PL A + +A P+P APPVT A +P
Sbjct: 17 TDAATACPSSSCTSAITTVAPLDANSRAAASPIPLAPPVTIATLP 151
>gb|CW325783.1|CW325783 104_820_11477874_148_35927_065 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11477874, DNA
sequence
Length = 630
Score = 47.3 bits (97), Expect = 3e-004
Identities = 26/79 (32%), Positives = 38/79 (48%)
Frame = +2 / +3
Query: 200 AGEMELKPGMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVATLVQKENSKF 379
A + + G A++TG ASGIGKA F R G V + D ++ GR VA + S
Sbjct: 99 ASDSQRLAGKVAVITGAASGIGKATAAEFVRNGAKVILADVQDDAGRAVAAELGPAASYT 278
Query: 380 HGDLRIPSSIFVKCDVSNA 436
D+ + I D++ A
Sbjct: 279 RCDVTDEAQIAAAVDLAVA 335
>gb|CW022376.1|CW022376 104_161_10431803_1_30006 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10431803, DNA
sequence
Length = 461
Score = 46.9 bits (96), Expect = 4e-004
Identities = 21/50 (42%), Positives = 28/50 (56%)
Frame = +2 / +1
Query: 200 AGEMELKPGMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVA 349
A + + G A++TG ASGIGKA F R G V + D ++ GR VA
Sbjct: 310 ASDSQRLAGKVAVITGAASGIGKATAAEFVRNGAKVILADVQDDAGRAVA 459
>gb|CW044699.1|CW044699 104_280_10509107_114_30262 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10509107, DNA
sequence
Length = 452
Score = 46.4 bits (95), Expect = 5e-004
Identities = 21/42 (50%), Positives = 26/42 (61%)
Frame = +2 / +2
Query: 224 GMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVA 349
G A+VTGGASGIG+A FA G V + D +E G+ VA
Sbjct: 323 GKVAIVTGGASGIGEAAARLFASSGATVVIADVQDELGQAVA 448
Score = 40.0 bits (81), Expect = 0.046
Identities = 20/42 (47%), Positives = 25/42 (59%)
Frame = -2 / -3
Query: 348 ATSLPFSSEKSTTVTNKPLLAKAIQSAFPMPEAPPVTSADMP 223
AT+ P SS S T PL A + +A P+P APPVT A +P
Sbjct: 447 ATACPSSSCTSAITTVAPLDANSRAAASPIPLAPPVTIATLP 322
>gb|CW054641.1|CW054641 104_295_10516644_115_30179 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10516644, DNA
sequence
Length = 319
Score = 33.6 bits (67), Expect(2) = 0.006
Identities = 11/14 (78%), Positives = 13/14 (92%)
Frame = -2 / -3
Query: 120 RGSGRHAELPRPKW 79
+G+GRHAELPR KW
Sbjct: 236 QGTGRHAELPREKW 195
Score = 31.3 bits (62), Expect(3) = 8e-004
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = +2 / +1
Query: 77 PHFGLGSSACRPEP 118
PHF LGSSAC P P
Sbjct: 193 PHFSLGSSACLPVP 234
Score = 30.4 bits (60), Expect(2) = 0.57
Identities = 15/20 (75%), Positives = 15/20 (75%)
Frame = +1 / +3
Query: 115 ASSRFASRTSRLRRCDSSAA 174
ASSRFASRTS LR SS A
Sbjct: 252 ASSRFASRTSPLRFLSSSTA 311
Score = 27.2 bits (53), Expect(2) = 0.006
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = -1 / -2
Query: 145 AKCEMRSGTR 116
AKCEMRSGTR
Sbjct: 282 AKCEMRSGTR 253
Score = 25.8 bits (50), Expect(3) = 8e-004
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = +3 / +2
Query: 117 LVPLRISHFA 146
LVPLRISHFA
Sbjct: 254 LVPLRISHFA 283
Score = 23.5 bits (45), Expect(3) = 8e-004
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +1 / +1
Query: 148 LRRCDSSAA 174
LRRCDSSAA
Sbjct: 277 LRRCDSSAA 303
Score = 23.5 bits (45), Expect(2) = 0.57
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = +3 / +2
Query: 78 PTSASAVPRAGRSLV 122
PTS SAVPRA LV
Sbjct: 194 PTSPSAVPRACPCLV 238
>gb|BG241815.1|BG241815 RHIZ2_51_B01.b1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 372
Score = 45.5 bits (93), Expect = 0.001
Identities = 20/42 (47%), Positives = 25/42 (59%)
Frame = +2 / +3
Query: 224 GMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVA 349
G A++TG ASGIGKA F R G V + D ++ GR VA
Sbjct: 183 GKVAVITGPASGIGKATAAEFVRNGAKVIIADVQDDLGRAVA 308
>gb|BG558407.1|BG558407 RHIZ2_67_A12.b1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 314
Score = 45.5 bits (93), Expect = 0.001
Identities = 20/42 (47%), Positives = 25/42 (59%)
Frame = +2 / +1
Query: 224 GMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVA 349
G A++TG ASGIGKA F R G V + D ++ GR VA
Sbjct: 142 GKVAVITGPASGIGKATAAEFVRNGAKVIIADVQDDLGRAVA 267
>gb|AW283129.2|AW283129 LG1_224_H03.g1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 529
Score = 45.1 bits (92), Expect = 0.001
Identities = 20/42 (47%), Positives = 26/42 (61%)
Frame = +2 / +2
Query: 641 KKPGVIINIGSAAGLYPMFLDPVYSAAKGGVVMFTRSLSPLK 766
KKPG I++I S A P+ P+Y AAK G+ F RSL L+
Sbjct: 5 KKPGSIVHISSIAAQGPVLSVPMYCAAKAGISHFVRSLGGLE 130
>gb|CW092957.1|CW092957 104_455_10999481_114_33047_067 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10999481, DNA
sequence
Length = 672
Score = 44.1 bits (90), Expect = 0.003
Identities = 18/41 (43%), Positives = 26/41 (63%)
Frame = +2 / +3
Query: 224 GMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREV 346
G ALVTGGA+GIG+A+ F G V + D +E G+++
Sbjct: 492 GKVALVTGGATGIGEAIVRLFTEHGAKVCIADIQDEAGQQL 614
Score = 34.5 bits (69), Expect = 2.1
Identities = 18/38 (47%), Positives = 18/38 (47%)
Frame = -2 / -3
Query: 336 PFSSEKSTTVTNKPLLAKAIQSAFPMPEAPPVTSADMP 223
P SS S T P K A PMP APPVT A P
Sbjct: 604 PASSWMSAMQTLAPCSVKRRTMASPMPVAPPVTRATFP 491
>gb|CW070779.1|CW070779 104_323_10591245_114_30471 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10591245, DNA
sequence
Length = 710
Score = 34.1 bits (68), Expect(2) = 0.004
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = -3 / -1
Query: 113 PAGTRNCRGRSG 78
PAGTRNCRGRSG
Sbjct: 611 PAGTRNCRGRSG 576
Score = 33.6 bits (67), Expect = 3.9
Identities = 11/14 (78%), Positives = 13/14 (92%)
Frame = -2 / -3
Query: 120 RGSGRHAELPRPKW 79
+G+GRHAELPR KW
Sbjct: 618 QGTGRHAELPREKW 577
Score = 32.7 bits (65), Expect = 7.4
Identities = 14/23 (60%), Positives = 16/23 (69%)
Frame = +1 / +1
Query: 79 PLRPRQFRVPAGASSRFASRTSR 147
PL PRQFRVPAGA + +SR
Sbjct: 577 PLLPRQFRVPAGALYLYPIASSR 645
Score = 31.3 bits (62), Expect(2) = 0.003
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = +2 / +2
Query: 77 PHFGLGSSACRPEP 118
PHF LGSSAC P P
Sbjct: 575 PHFSLGSSACLPVP 616
Score = 30.4 bits (60), Expect(2) = 0.003
Identities = 15/20 (75%), Positives = 15/20 (75%)
Frame = +1 / +1
Query: 115 ASSRFASRTSRLRRCDSSAA 174
ASSRFASRTS LR SS A
Sbjct: 634 ASSRFASRTSPLRFLSSSTA 693
Score = 27.2 bits (53), Expect(2) = 0.004
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = -1 / -2
Query: 145 AKCEMRSGTR 116
AKCEMRSGTR
Sbjct: 664 AKCEMRSGTR 635
Score = 26.7 bits (52), Expect(3) = 0.078
Identities = 12/15 (80%), Positives = 12/15 (80%)
Frame = +3 / +3
Query: 78 PTSASAVPRAGRSLV 122
PTS SAVPRA R LV
Sbjct: 576 PTSPSAVPRACRCLV 620
Score = 25.8 bits (50), Expect(3) = 0.078
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = +3 / +3
Query: 117 LVPLRISHFA 146
LVPLRISHFA
Sbjct: 636 LVPLRISHFA 665
Score = 23.5 bits (45), Expect(3) = 0.078
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +1 / +2
Query: 148 LRRCDSSAA 174
LRRCDSSAA
Sbjct: 659 LRRCDSSAA 685
>gb|CN142362.1|CN142362 WOUND1_9_C02.g1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_9_C02_A002 5', mRNA sequence
Length = 552
Score = 34.5 bits (69), Expect(2) = 0.003
Identities = 17/37 (45%), Positives = 20/37 (54%)
Frame = +2 / +3
Query: 233 ALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGRE 343
ALVTGG G+G +C A GL V + SE G E
Sbjct: 114 ALVTGGNRGMGFEICRQLASGGLTVVLTARSETRGAE 224
Score = 27.2 bits (53), Expect(2) = 0.003
Identities = 13/51 (25%), Positives = 24/51 (47%)
Frame = +2 / +3
Query: 389 LRIPSSIFVKCDVSNADNLAACFEKHVQTYNGLDICINCAGIANKTLVYDD 541
L +P +F + D++ + A + + LD+ +N AGI T+ D
Sbjct: 246 LGLPDVVFHQLDITEPASAARLADFVRSKFGKLDVLVNNAGIMGVTMEVGD 398
>gb|CW070884.1|CW070884 104_323_10591293_114_30471 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10591293, DNA
sequence
Length = 548
Score = 34.1 bits (68), Expect(2) = 0.004
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = -3 / -1
Query: 113 PAGTRNCRGRSG 78
PAGTRNCRGRSG
Sbjct: 449 PAGTRNCRGRSG 414
Score = 33.6 bits (67), Expect = 3.9
Identities = 11/14 (78%), Positives = 13/14 (92%)
Frame = -2 / -3
Query: 120 RGSGRHAELPRPKW 79
+G+GRHAELPR KW
Sbjct: 456 QGTGRHAELPREKW 415
Score = 32.7 bits (65), Expect = 7.4
Identities = 14/23 (60%), Positives = 16/23 (69%)
Frame = +1 / +1
Query: 79 PLRPRQFRVPAGASSRFASRTSR 147
PL PRQFRVPAGA + +SR
Sbjct: 415 PLLPRQFRVPAGALYLYPIASSR 483
Score = 31.3 bits (62), Expect(2) = 0.003
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = +2 / +2
Query: 77 PHFGLGSSACRPEP 118
PHF LGSSAC P P
Sbjct: 413 PHFSLGSSACLPVP 454
Score = 30.4 bits (60), Expect(2) = 0.003
Identities = 15/20 (75%), Positives = 15/20 (75%)
Frame = +1 / +1
Query: 115 ASSRFASRTSRLRRCDSSAA 174
ASSRFASRTS LR SS A
Sbjct: 472 ASSRFASRTSPLRFLSSSTA 531
Score = 27.2 bits (53), Expect(2) = 0.004
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = -1 / -2
Query: 145 AKCEMRSGTR 116
AKCEMRSGTR
Sbjct: 502 AKCEMRSGTR 473
Score = 26.7 bits (52), Expect(3) = 0.047
Identities = 12/15 (80%), Positives = 12/15 (80%)
Frame = +3 / +3
Query: 78 PTSASAVPRAGRSLV 122
PTS SAVPRA R LV
Sbjct: 414 PTSPSAVPRACRCLV 458
Score = 25.8 bits (50), Expect(3) = 0.047
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = +3 / +3
Query: 117 LVPLRISHFA 146
LVPLRISHFA
Sbjct: 474 LVPLRISHFA 503
Score = 23.5 bits (45), Expect(3) = 0.047
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +1 / +2
Query: 148 LRRCDSSAA 174
LRRCDSSAA
Sbjct: 497 LRRCDSSAA 523
>gb|CW224532.1|CW224532 104_660_11203494_116_37444_017 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11203494, DNA
sequence
Length = 611
Score = 43.7 bits (89), Expect = 0.004
Identities = 20/50 (40%), Positives = 27/50 (54%)
Frame = +2 / +2
Query: 200 AGEMELKPGMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVA 349
A + + G AL+TG ASGIG A F R G V + D ++ GR +A
Sbjct: 419 ADDSQRLAGKVALITGAASGIGAATAREFVRAGAKVVLADVQDDQGRALA 568
>gb|AW677087.1|AW677087 DG1_4_A08.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 297
Score = 43.7 bits (89), Expect = 0.004
Identities = 19/47 (40%), Positives = 26/47 (55%)
Frame = +2 / +1
Query: 200 AGEMELKPGMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGR 340
A + + G A++TG ASGIGKA F R G V + D ++ GR
Sbjct: 157 ASDSQRLAGKVAVITGAASGIGKATAAEFVRNGAKVILADVQDDAGR 297
>gb|CW033844.1|CW033844 104_263_10502188_114_30359 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10502188, DNA
sequence
Length = 589
Score = 43.2 bits (88), Expect = 0.005
Identities = 19/62 (30%), Positives = 32/62 (51%)
Frame = +2 / -2
Query: 224 GMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVATLVQKENSKFHGDLRIPS 403
G A+VTGGA GIG+A+ F + G V + D + G +A+ + + S D+ +
Sbjct: 510 GKVAIVTGGARGIGEAIVRLFVKHGARVVIADIDDAAGEALASALGPQVSFVRCDVSVEE 331
Query: 404 SI 409
+
Sbjct: 330 DV 325
Score = 40.0 bits (81), Expect = 0.046
Identities = 17/42 (40%), Positives = 22/42 (52%)
Frame = -2 / +2
Query: 348 ATSLPFSSEKSTTVTNKPLLAKAIQSAFPMPEAPPVTSADMP 223
A++ P +S S T P ++ A PMP APPVT A P
Sbjct: 386 ASASPAASSMSAITTRAPCFTNSLTMASPMPLAPPVTMATFP 511
>gb|CW228650.1|CW228650 104_668_11206494_148_37253_021 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11206494, DNA
sequence
Length = 496
Score = 43.2 bits (88), Expect = 0.005
Identities = 19/62 (30%), Positives = 32/62 (51%)
Frame = +2 / +2
Query: 224 GMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVATLVQKENSKFHGDLRIPS 403
G A+VTGGA GIG+A+ F + G V + D + G +A+ + + S D+ +
Sbjct: 221 GKVAIVTGGARGIGEAIVRLFVKHGARVVIADIDDAAGEALASALGPQVSFVRCDVSVEE 400
Query: 404 SI 409
+
Sbjct: 401 DV 406
Score = 40.0 bits (81), Expect = 0.046
Identities = 17/42 (40%), Positives = 22/42 (52%)
Frame = -2 / -2
Query: 348 ATSLPFSSEKSTTVTNKPLLAKAIQSAFPMPEAPPVTSADMP 223
A++ P +S S T P ++ A PMP APPVT A P
Sbjct: 345 ASASPAASSMSAITTRAPCFTNSLTMASPMPLAPPVTMATFP 220
>gb|CW213992.1|CW213992 104_645_11191856_148_37040_020 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11191856, DNA
sequence
Length = 466
Score = 36.8 bits (74), Expect(2) = 0.007
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = +2 / +1
Query: 410 FVKCDVSNADNLAACFEKHVQTYNGLDICINCAGI 514
FV CDV+ D++AA + V + LD+ +N AG+
Sbjct: 7 FVHCDVAAEDSVAAAVDAAVARHGRLDVMLNSAGV 111
Score = 25.4 bits (49), Expect(2) = 0.007
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = +2 / +1
Query: 761 LKRHGVRVNVLCP 799
L RHGVRVN + P
Sbjct: 388 LSRHGVRVNCISP 426
>gb|CN149463.1|CN149463 WOUND1_62_H11.g1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_62_H11_A002 5', mRNA sequence
Length = 766
Score = 36.8 bits (74), Expect(2) = 0.008
Identities = 20/58 (34%), Positives = 28/58 (48%)
Frame = +2 / +2
Query: 212 ELKPGMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVATLVQKENSKFHG 385
+L G +ALVTGG SGIG + AR G V ++ E + ++ E K G
Sbjct: 35 DLLRGKAALVTGGGSGIGFEIATQLARHGAHVALMGRRREVLDKAVAALRSEGLKAVG 208
Score = 35.4 bits (71), Expect = 1.1
Identities = 15/36 (41%), Positives = 20/36 (55%)
Frame = -2 / -2
Query: 330 SSEKSTTVTNKPLLAKAIQSAFPMPEAPPVTSADMP 223
S + + T P A + + PMPE PPVTSA +P
Sbjct: 153 SRRRPMSATCAPWRASCVAISKPMPEPPPVTSAALP 46
Score = 25.8 bits (50), Expect(2) = 0.008
Identities = 15/42 (35%), Positives = 20/42 (47%)
Frame = +2 / +2
Query: 632 RNQKKPGVIINIGSAAGLYPMFLDPVYSAAKGGVVMFTRSLS 757
R+ G+I NI + + SAAK GV TRSL+
Sbjct: 437 RDPSSGGLISNISATLQYTAAWYQIHVSAAKAGVDSITRSLA 562
>gb|CW220957.1|CW220957 104_655_11197639_116_37153_018 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11197639, DNA
sequence
Length = 665
Score = 42.3 bits (86), Expect = 0.009
Identities = 16/45 (35%), Positives = 30/45 (66%)
Frame = +2 / -1
Query: 224 GMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVATLV 358
G A+VTG SG+G+++ + ARRGL + ++D + +N +E + +
Sbjct: 581 GSWAIVTGPTSGLGRSMAMELARRGLNLVLLDLNADNLQETSDAI 447
>gb|CW220958.1|CW220958 104_655_11197639_148_37154_018 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11197639, DNA
sequence
Length = 650
Score = 42.3 bits (86), Expect = 0.009
Identities = 16/45 (35%), Positives = 30/45 (66%)
Frame = +2 / +1
Query: 224 GMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVATLV 358
G A+VTG SG+G+++ + ARRGL + ++D + +N +E + +
Sbjct: 181 GSWAIVTGPTSGLGRSMAMELARRGLNLVLLDLNADNLQETSDAI 315
>gb|CW289716.1|CW289716 104_768_11412628_148_35550_004 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11412628, DNA
sequence
Length = 244
Score = 42.3 bits (86), Expect = 0.009
Identities = 19/62 (30%), Positives = 31/62 (50%)
Frame = +2 / +2
Query: 224 GMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVATLVQKENSKFHGDLRIPS 403
G A+VTGGA GIG+A+ F + G V + D + G +A+ + S D+ +
Sbjct: 8 GKVAIVTGGARGIGEAIVRLFVKHGARVVIADIDDAAGEALASALGPHVSFVRCDVSVEE 187
Query: 404 SI 409
+
Sbjct: 188 DV 193
Score = 40.0 bits (81), Expect = 0.046
Identities = 17/42 (40%), Positives = 22/42 (52%)
Frame = -2 / -2
Query: 348 ATSLPFSSEKSTTVTNKPLLAKAIQSAFPMPEAPPVTSADMP 223
A++ P +S S T P ++ A PMP APPVT A P
Sbjct: 132 ASASPAASSMSAITTRAPCFTNSLTMASPMPLAPPVTMATFP 7
>gb|CW388989.1|CW388989 fsbb001f073p21f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f073p21, DNA
sequence
Length = 704
Score = 42.3 bits (86), Expect = 0.009
Identities = 16/45 (35%), Positives = 30/45 (66%)
Frame = +2 / +1
Query: 224 GMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVATLV 358
G A+VTG SG+G+++ + ARRGL + ++D + +N +E + +
Sbjct: 121 GSWAIVTGPTSGLGRSMAMELARRGLNLVLLDLNADNLQETSDAI 255
>gb|CW492988.1|CW492988 fsbb001f283i21f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f283i21, DNA
sequence
Length = 565
Score = 42.3 bits (86), Expect = 0.009
Identities = 16/45 (35%), Positives = 30/45 (66%)
Frame = +2 / +2
Query: 224 GMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVATLV 358
G A+VTG SG+G+++ + ARRGL + ++D + +N +E + +
Sbjct: 356 GSWAIVTGPTSGLGRSMAMELARRGLNLVLLDLNADNLQETSDAI 490
>gb|CW499156.1|CW499156 fsbb001f293m08k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f293m08, DNA
sequence
Length = 701
Score = 42.3 bits (86), Expect = 0.009
Identities = 16/45 (35%), Positives = 30/45 (66%)
Frame = +2 / +1
Query: 224 GMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVATLV 358
G A+VTG SG+G+++ + ARRGL + ++D + +N +E + +
Sbjct: 553 GSWAIVTGPTSGLGRSMAMELARRGLNLVLLDLNADNLQETSDAI 687
>gb|CW156373.1|CW156373 104_559_11146651_116_36375_076 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11146651, DNA
sequence
Length = 693
Score = 41.8 bits (85), Expect = 0.013
Identities = 18/51 (35%), Positives = 31/51 (60%)
Frame = +2 / +1
Query: 206 EMELKPGMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVATLV 358
++ + G A+VTG SGIG+++ + ARRGL + ++D N E + +V
Sbjct: 229 DLRRRYGAWAVVTGPTSGIGRSVALELARRGLNLVLLDLDAGNLEETSDVV 381
>gb|CW220017.1|CW220017 104_654_11197127_148_37146_088 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11197127, DNA
sequence
Length = 741
Score = 41.8 bits (85), Expect = 0.013
Identities = 18/51 (35%), Positives = 31/51 (60%)
Frame = +2 / -3
Query: 206 EMELKPGMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVATLV 358
++ + G A+VTG SGIG+++ + ARRGL + ++D N E + +V
Sbjct: 235 DLRRRYGAWAVVTGPTSGIGRSVALELARRGLNLVLLDLDAGNLEETSDVV 83
>gb|CW424961.1|CW424961 fsbb001f135i18f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f135i18, DNA
sequence
Length = 704
Score = 41.8 bits (85), Expect = 0.013
Identities = 18/51 (35%), Positives = 31/51 (60%)
Frame = +2 / -2
Query: 206 EMELKPGMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVATLV 358
++ + G A+VTG SGIG+++ + ARRGL + ++D N E + +V
Sbjct: 256 DLRRRYGAWAVVTGPTSGIGRSVALELARRGLNLVLLDLDAGNLEETSDVV 104
>gb|CW263777.1|CW263777 104_732_11230905_116_35239_043 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11230905, DNA
sequence
Length = 632
Score = 38.2 bits (77), Expect(2) = 0.017
Identities = 15/43 (34%), Positives = 25/43 (58%)
Frame = -2 / -3
Query: 336 PFSSEKSTTVTNKPLLAKAIQSAFPMPEAPPVTSADMPGLSSI 208
P S + T PLLA + ++ P+P PPVT+A +P +++
Sbjct: 294 PLFSSLAVKTTVMPLLASCLHTSSPIPLFPPVTTATLPKYTTV 166
Score = 33.6 bits (67), Expect = 3.9
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = +2 / +2
Query: 224 GMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENG 337
G A+VTGG GIG +C A G+ V + E+ G
Sbjct: 182 GRVAVVTGGNKGIGLEVCRQLASNGITVVLTARDEKRG 295
Score = 23.1 bits (44), Expect(2) = 0.017
Identities = 7/12 (58%), Positives = 11/12 (91%)
Frame = -2 / -2
Query: 741 NITTPPFAALYT 706
+++TPP AAL+T
Sbjct: 556 SVSTPPIAALFT 521
>gb|CW182785.1|CW182785 104_598_11164264_148_36669_058 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11164264, DNA
sequence
Length = 704
Score = 41.4 bits (84), Expect = 0.018
Identities = 17/58 (29%), Positives = 33/58 (56%)
Frame = +2 / +3
Query: 344 VATLVQKENSKFHGDLRIPSSIFVKCDVSNADNLAACFEKHVQTYNGLDICINCAGIA 517
VA + + ++ D+ ++ + CDV++ D++AA + V T+ LDI N AG++
Sbjct: 462 VADIQDEAGARVCADVGAGAASYFHCDVTSEDDVAAAVDHAVATFGALDIMFNNAGVS 635
Score = 40.9 bits (83), Expect = 0.024
Identities = 18/41 (43%), Positives = 22/41 (53%)
Frame = +2 / +3
Query: 224 GMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREV 346
G A++TGGASGIG+ F G V V D +E G V
Sbjct: 375 GKVAMITGGASGIGERTVRLFVEHGARVVVADIQDEAGARV 497
Score = 34.1 bits (68), Expect = 2.8
Identities = 17/45 (37%), Positives = 20/45 (44%)
Frame = -2 / -2
Query: 357 TNVATSLPFSSEKSTTVTNKPLLAKAIQSAFPMPEAPPVTSADMP 223
T+ T P SS S T T P + P+P APPV A P
Sbjct: 508 TSAQTRAPASSWMSATTTRAPCSTNSRTVRSPIPLAPPVIMATFP 374
>gb|CW222649.1|CW222649 104_658_11202489_116_37177_043 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11202489, DNA
sequence
Length = 644
Score = 41.4 bits (84), Expect = 0.018
Identities = 17/35 (48%), Positives = 21/35 (60%)
Frame = +2 / +2
Query: 224 GMSALVTGGASGIGKALCIAFARRGLFVTVVDFSE 328
G A++TGGASGIGKA F R G V + D +
Sbjct: 539 GKVAVITGGASGIGKATAAEFVRNGARVIIADVQD 643
Score = 33.6 bits (67), Expect = 3.9
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = -2 / -3
Query: 318 STTVTNKPLLAKAIQSAFPMPEAPPVTSADMP 223
S +T P L + AFP+P APPV +A P
Sbjct: 633 SAMMTLAPFLTNSAAVAFPIPLAPPVITATFP 538
>gb|CW229003.1|CW229003 104_670_11207073_148_37260_045 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11207073, DNA
sequence
Length = 605
Score = 41.4 bits (84), Expect = 0.018
Identities = 18/45 (40%), Positives = 28/45 (62%)
Frame = +2 / -2
Query: 206 EMELKPGMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGR 340
EM+L ++A+VTGGASG+G A + G+ V ++D + GR
Sbjct: 316 EMQLDSSIAAVVTGGASGVGAATARSLTSHGVKVALLDLNV*AGR 182
Score = 35.4 bits (71), Expect = 1.1
Identities = 19/44 (43%), Positives = 24/44 (54%)
Frame = -2 / +3
Query: 336 PFSSEKSTTVTNKPLLAKAIQSAFPMPEAPPVTSADMPGLSSIS 205
P + +S + T P L + A P PEAPPVT+A M S IS
Sbjct: 186 PAHTLRSNSATFTP*LVRLRAVAAPTPEAPPVTTAAMLESSCIS 317
>gb|AW676954.1|AW676954 DG1_2_D02.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 438
Score = 41.4 bits (84), Expect = 0.018
Identities = 18/53 (33%), Positives = 30/53 (56%)
Frame = +2 / +1
Query: 212 ELKPGMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVATLVQKEN 370
EL P A+VTGG G+G +C A +G+ V + E+ G+ A +++E+
Sbjct: 151 ELIPERLAVVTGGNKGVGLEVCRQLAHKGVTVILTARDEKRGKYAAETLRRES 309
>gb|BI141571.1|BI141571 IP1_54_B04.b1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 359
Score = 41.4 bits (84), Expect = 0.018
Identities = 17/58 (29%), Positives = 33/58 (56%)
Frame = +2 / +2
Query: 344 VATLVQKENSKFHGDLRIPSSIFVKCDVSNADNLAACFEKHVQTYNGLDICINCAGIA 517
VA + + ++ D+ ++ + CDV++ D++AA + V T+ LDI N AG++
Sbjct: 161 VADIQDEAGARVCADVGAGAASYFHCDVTSEDDVAAAVDHAVATFGALDIMFNNAGVS 334
Score = 40.9 bits (83), Expect = 0.024
Identities = 18/41 (43%), Positives = 22/41 (53%)
Frame = +2 / +2
Query: 224 GMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREV 346
G A++TGGASGIG+ F G V V D +E G V
Sbjct: 74 GKVAMITGGASGIGERTVRLFVEHGARVVVADIQDEAGARV 196
Score = 34.1 bits (68), Expect = 2.8
Identities = 17/45 (37%), Positives = 20/45 (44%)
Frame = -2 / -3
Query: 357 TNVATSLPFSSEKSTTVTNKPLLAKAIQSAFPMPEAPPVTSADMP 223
T+ T P SS S T T P + P+P APPV A P
Sbjct: 207 TSAQTRAPASSWMSATTTRAPCSTNSRTVRSPIPLAPPVIMATFP 73
>gb|CX620595.1|CX620595 GABR1_52_G03.g1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_52_G03_A002 5', mRNA sequence
Length = 437
Score = 41.4 bits (84), Expect = 0.018
Identities = 17/43 (39%), Positives = 25/43 (58%)
Frame = +2 / +1
Query: 224 GMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVAT 352
G A+VTGGA GIG+A+ F + G V + D + G +A+
Sbjct: 277 GKVAIVTGGARGIGEAIVRLFVKHGARVVIADIDDAAGEALAS 405
Score = 40.0 bits (81), Expect = 0.046
Identities = 17/42 (40%), Positives = 22/42 (52%)
Frame = -2 / -1
Query: 348 ATSLPFSSEKSTTVTNKPLLAKAIQSAFPMPEAPPVTSADMP 223
A++ P +S S T P ++ A PMP APPVT A P
Sbjct: 401 ASASPAASSMSAITTRAPCFTNSLTMASPMPLAPPVTMATFP 276
>gb|CN134655.1|CN134655 OX1_27_D10.g1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_27_D10_A002 5', mRNA sequence
Length = 748
Score = 29.5 bits (58), Expect(2) = 0.020
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = +2 / +3
Query: 422 DVSNADNLAACFEKHVQTYNGLDICINCAGIANKTLV 532
DVS ++ + + V T+ +D+ +N AGI TL+
Sbjct: 462 DVSKEADVESMIKMAVDTWGTIDVLVNNAGITRDTLL 572
Score = 29.5 bits (58), Expect(2) = 0.020
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +2 / +3
Query: 224 GMSALVTGGASGIGKALCIAFARRGLFVTV 313
G +VTG + GIGKA +A + G V V
Sbjct: 288 GPVVVVTGASRGIGKATALALGKAGCKVLV 377
>gb|AW672254.1|AW672254 LG1_358_G10.b1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 523
Score = 35.4 bits (71), Expect(2) = 0.020
Identities = 17/43 (39%), Positives = 22/43 (51%)
Frame = +2 / +2
Query: 233 ALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVATLVQ 361
ALVTGG GIG C A +GL V + +E G E ++
Sbjct: 59 ALVTGGNKGIGLETCRQLASKGLRVVLTARNEARGLEAVERIR 187
Score = 23.5 bits (45), Expect(2) = 0.020
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +2 / +2
Query: 410 FVKCDVSNADNLAACFEKHVQTYNGLDICINCAGIA 517
F + DV++ + A E + LDI IN AGI+
Sbjct: 215 FHQLDVTDPSSAARLAEFVRDQFGRLDILINNAGIS 322
>gb|BG322818.1|BG322818 EM1_14_E09.b1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 535
Score = 40.9 bits (83), Expect = 0.024
Identities = 18/41 (43%), Positives = 26/41 (63%)
Frame = +2 / +3
Query: 224 GMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREV 346
G L+TG ASGIG+ L +A+RG ++ +V E + REV
Sbjct: 156 GKVVLITGAASGIGEHLAYEYAKRGAYLALVARREASLREV 278
>gb|CW383248.1|CW383248 fsbb001f065k09k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f065k09, DNA
sequence
Length = 524
Score = 37.3 bits (75), Expect(2) = 0.025
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = -2 / +3
Query: 336 PFSSEKSTTVTNKPLLAKAIQSAFPMPEAPPVTSADMP 223
P S + T PLLA + ++ P+P PPVT+A +P
Sbjct: 375 PLFSSLAVKTTVMPLLASCLHTSSPIPLFPPVTTATLP 488
Score = 33.6 bits (67), Expect = 3.9
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = +2 / -2
Query: 224 GMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENG 337
G A+VTGG GIG +C A G+ V + E+ G
Sbjct: 487 GRVAVVTGGNKGIGLEVCRQLASNGITVVLTARDEKRG 374
Score = 23.1 bits (44), Expect(2) = 0.025
Identities = 7/12 (58%), Positives = 11/12 (91%)
Frame = -2 / +2
Query: 741 NITTPPFAALYT 706
+++TPP AAL+T
Sbjct: 113 SVSTPPIAALFT 148
>gb|CW499024.1|CW499024 fsbb001f293j08k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f293j08, DNA
sequence
Length = 618
Score = 32.7 bits (65), Expect(2) = 0.027
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = +2 / +1
Query: 224 GMSALVTGGASGIGKALCIAFARRG 298
G AL+TGGASGIG+ F + G
Sbjct: 370 GKVALITGGASGIGECTARLFVKHG 444
Score = 25.8 bits (50), Expect(2) = 0.027
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = +2 / +2
Query: 410 FVKCDVSNADNLAACFEKHVQTYNGLDI 493
+V CDV+ ++AA + V + LDI
Sbjct: 527 YVHCDVTGKADVAAAVDHAVARFGALDI 610
>gb|BZ350313.1|BZ350313 hr53f06.g1 WGS-SbicolorF (JM107 adapted methyl filtered) Sorghum
bicolor genomic clone hr53f06 5', DNA sequence
Length = 188
Score = 40.5 bits (82), Expect = 0.033
Identities = 16/36 (44%), Positives = 21/36 (58%)
Frame = +2 / +2
Query: 224 GMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEE 331
G A++TGGASGIGK F R G V + D ++
Sbjct: 77 GKVAVITGGASGIGKGTAAEFVRNGARVIIADVQDD 184
Score = 33.1 bits (66), Expect = 5.4
Identities = 15/36 (41%), Positives = 19/36 (52%)
Frame = -2 / -3
Query: 330 SSEKSTTVTNKPLLAKAIQSAFPMPEAPPVTSADMP 223
SS S +T P L + FP+P APPV +A P
Sbjct: 183 SSWTSAMMTLAPFLTNSAAVPFPIPLAPPVITATFP 76
>gb|CW221459.1|CW221459 104_656_11197919_116_37452_088 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11197919, DNA
sequence
Length = 668
Score = 40.5 bits (82), Expect = 0.033
Identities = 17/47 (36%), Positives = 29/47 (61%)
Frame = +2 / +1
Query: 236 LVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVATLVQKENSK 376
LVTG + GIG+ + +AR G V ++ +EE R+VA+ + +E +
Sbjct: 202 LVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGR 342
>gb|CW420913.1|CW420913 fsbb001f128h18k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f128h18, DNA
sequence
Length = 776
Score = 40.0 bits (81), Expect = 0.046
Identities = 18/50 (36%), Positives = 25/50 (50%)
Frame = +2 / -1
Query: 233 ALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVATLVQKENSKFH 382
A+VTGG GIG +C A G+ V + E+ G E + + N FH
Sbjct: 512 AVVTGGNRGIGLEICKQLASNGITVVLTARDEKRGAEAVSTLGLSNVVFH 363
>gb|CX618718.1|CX618718 GABR1_41_F07.b1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_41_F07_A002 3', mRNA sequence
Length = 645
Score = 40.0 bits (81), Expect = 0.046
Identities = 19/40 (47%), Positives = 25/40 (62%)
Frame = +2 / +1
Query: 638 QKKPGVIINIGSAAGLYPMFLDPVYSAAKGGVVMFTRSLS 757
+KK G IINI S GL YSAAK GV+ FT++++
Sbjct: 151 KKKKGKIINIASVVGLTGNVGQANYSAAKAGVIGFTKTVA 270
>gb|CL161478.1|CL161478 104_353_10805748_116_31829_036 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10805748, DNA
sequence
Length = 736
Score = 39.6 bits (80), Expect = 0.063
Identities = 18/50 (36%), Positives = 25/50 (50%)
Frame = +2 / -3
Query: 233 ALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVATLVQKENSKFH 382
A+VTGG GIG +C A G+ V + E+ G E + + N FH
Sbjct: 542 AVVTGGNRGIGLEICKQLASNGVTVVLTARDEKRGAEAVSTLGLSNVVFH 393
Score = 32.7 bits (65), Expect = 7.4
Identities = 17/61 (27%), Positives = 28/61 (45%)
Frame = -2 / +1
Query: 408 IEDGILRSP*NLLFSF*TNVATSLPFSSEKSTTVTNKPLLAKAIQSAFPMPEAPPVTSAD 229
++ + S *N + + S P S + T PL A + + P+P PPVT+A
Sbjct: 367 LDGSLTSSS*NTTLDSPSVLTASAPLFSSLAVNTTVTPLEASCLHISRPIPLFPPVTTAT 546
Query: 228 M 226
+
Sbjct: 547 L 549
>gb|CL187495.1|CL187495 104_403_10900925_114_32461_029 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10900925, DNA
sequence
Length = 604
Score = 39.6 bits (80), Expect = 0.063
Identities = 16/25 (64%), Positives = 19/25 (76%)
Frame = +2 / +2
Query: 233 ALVTGGASGIGKALCIAFARRGLFV 307
ALVTGG SGIG+A+C+ FA G V
Sbjct: 437 ALVTGGDSGIGRAVCLLFAAEGASV 511
Score = 36.3 bits (73), Expect = 0.58
Identities = 15/27 (55%), Positives = 19/27 (70%)
Frame = -2 / -2
Query: 306 TNKPLLAKAIQSAFPMPEAPPVTSADM 226
T+ P AK +A PMPE+PPVTSA +
Sbjct: 510 TDAPSAAKRRHTARPMPESPPVTSATL 430
>gb|CW172378.1|CW172378 104_583_11156260_148_36535_006 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11156260, DNA
sequence
Length = 620
Score = 39.6 bits (80), Expect = 0.063
Identities = 18/50 (36%), Positives = 25/50 (50%)
Frame = +2 / -3
Query: 233 ALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVATLVQKENSKFH 382
A+VTGG GIG +C A G+ V + E+ G E + + N FH
Sbjct: 303 AVVTGGNRGIGLEICKQLASNGVTVVLTARDEKRGAEAVSTLGLSNVVFH 154
>gb|CW250044.1|CW250044 104_712_11223176_116_35051_030 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11223176, DNA
sequence
Length = 589
Score = 39.6 bits (80), Expect = 0.063
Identities = 18/50 (36%), Positives = 25/50 (50%)
Frame = +2 / +1
Query: 233 ALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVATLVQKENSKFH 382
A+VTGG GIG +C A G+ V + E+ G E + + N FH
Sbjct: 106 AVVTGGNRGIGLEICKQLASNGVTVVLTARDEKRGAEAVSTLGLSNVVFH 255
>gb|CW457805.1|CW457805 fsbb001f203m13f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f203m13, DNA
sequence
Length = 768
Score = 39.6 bits (80), Expect = 0.063
Identities = 18/50 (36%), Positives = 25/50 (50%)
Frame = +2 / +1
Query: 233 ALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVATLVQKENSKFH 382
A+VTGG GIG +C A G+ V + E+ G E + + N FH
Sbjct: 391 AVVTGGNRGIGLEICKQLASNGVTVVLTARDEKRGAEAVSTLGLSNVVFH 540
Score = 32.7 bits (65), Expect = 7.4
Identities = 17/61 (27%), Positives = 28/61 (45%)
Frame = -2 / -2
Query: 408 IEDGILRSP*NLLFSF*TNVATSLPFSSEKSTTVTNKPLLAKAIQSAFPMPEAPPVTSAD 229
++ + S *N + + S P S + T PL A + + P+P PPVT+A
Sbjct: 566 LDGSLTSSS*NTTLDSPSVLTASAPLFSSLAVNTTVTPLEASCLHISRPIPLFPPVTTAT 387
Query: 228 M 226
+
Sbjct: 386 L 384
>gb|CW463968.1|CW463968 fsbb001f212p05f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f212p05, DNA
sequence
Length = 544
Score = 39.6 bits (80), Expect = 0.063
Identities = 16/25 (64%), Positives = 19/25 (76%)
Frame = +2 / +1
Query: 233 ALVTGGASGIGKALCIAFARRGLFV 307
ALVTGG SGIG+A+C+ FA G V
Sbjct: 310 ALVTGGDSGIGRAVCLLFAAEGASV 384
Score = 36.3 bits (73), Expect = 0.58
Identities = 15/27 (55%), Positives = 19/27 (70%)
Frame = -2 / -3
Query: 306 TNKPLLAKAIQSAFPMPEAPPVTSADM 226
T+ P AK +A PMPE+PPVTSA +
Sbjct: 383 TDAPSAAKRRHTARPMPESPPVTSATL 303
>gb|CW468710.1|CW468710 fsbb001f221a22f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f221a22, DNA
sequence
Length = 614
Score = 39.6 bits (80), Expect = 0.063
Identities = 18/50 (36%), Positives = 25/50 (50%)
Frame = +2 / +3
Query: 233 ALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVATLVQKENSKFH 382
A+VTGG GIG +C A G+ V + E+ G E + + N FH
Sbjct: 312 AVVTGGNRGIGLEICKQLASNGVTVVLTARDEKRGAEAVSTLGLSNVVFH 461
>gb|AW672490.1|AW672490 LG1_360_H08.b1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 518
Score = 39.6 bits (80), Expect = 0.063
Identities = 19/47 (40%), Positives = 26/47 (55%)
Frame = -2 / -2
Query: 351 VATSLPFSSEKSTTVTNKPLLAKAIQSAFPMPEAPPVTSADMPGLSS 211
+AT+ S ++TT T+ P LA + PMPE PVT +P SS
Sbjct: 517 LATARSAISVRATTATHAPCLAYSYTRCSPMPEDAPVTRTTLPRRSS 377
Score = 36.8 bits (74), Expect = 0.42
Identities = 20/42 (47%), Positives = 24/42 (57%)
Frame = +2 / +3
Query: 224 GMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVA 349
G LVTG +SGIG+ L +AR G V VV +E R VA
Sbjct: 390 GKVVLVTGASSGIGEHLVYEYARHGACVAVVARTEIALRAVA 515
>gb|BG355462.1|BG355462 EM1_16_G04.b1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 521
Score = 39.6 bits (80), Expect = 0.063
Identities = 16/25 (64%), Positives = 19/25 (76%)
Frame = +2 / +1
Query: 233 ALVTGGASGIGKALCIAFARRGLFV 307
ALVTGG SGIG+A+C+ FA G V
Sbjct: 226 ALVTGGDSGIGRAVCLLFAAEGASV 300
Score = 36.3 bits (73), Expect = 0.58
Identities = 15/27 (55%), Positives = 19/27 (70%)
Frame = -2 / -1
Query: 306 TNKPLLAKAIQSAFPMPEAPPVTSADM 226
T+ P AK +A PMPE+PPVTSA +
Sbjct: 299 TDAPSAAKRRHTARPMPESPPVTSATL 219
>gb|BG556186.1|BG556186 EM1_68_G11.b1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 526
Score = 39.6 bits (80), Expect = 0.063
Identities = 16/25 (64%), Positives = 19/25 (76%)
Frame = +2 / +2
Query: 233 ALVTGGASGIGKALCIAFARRGLFV 307
ALVTGG SGIG+A+C+ FA G V
Sbjct: 227 ALVTGGDSGIGRAVCLLFAAEGASV 301
Score = 36.3 bits (73), Expect = 0.58
Identities = 15/27 (55%), Positives = 19/27 (70%)
Frame = -2 / -2
Query: 306 TNKPLLAKAIQSAFPMPEAPPVTSADM 226
T+ P AK +A PMPE+PPVTSA +
Sbjct: 300 TDAPSAAKRRHTARPMPESPPVTSATL 220
>gb|BG557336.1|BG557336 EM1_42_G01.b1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 319
Score = 39.6 bits (80), Expect = 0.063
Identities = 16/25 (64%), Positives = 19/25 (76%)
Frame = +2 / +2
Query: 233 ALVTGGASGIGKALCIAFARRGLFV 307
ALVTGG SGIG+A+C+ FA G V
Sbjct: 224 ALVTGGDSGIGRAVCLLFAAEGASV 298
Score = 36.3 bits (73), Expect = 0.58
Identities = 15/27 (55%), Positives = 19/27 (70%)
Frame = -2 / -2
Query: 306 TNKPLLAKAIQSAFPMPEAPPVTSADM 226
T+ P AK +A PMPE+PPVTSA +
Sbjct: 297 TDAPSAAKRRHTARPMPESPPVTSATL 217
>gb|BG649336.1|BG649336 EM1_78_B12.b1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 453
Score = 39.6 bits (80), Expect = 0.063
Identities = 16/25 (64%), Positives = 19/25 (76%)
Frame = +2 / +2
Query: 233 ALVTGGASGIGKALCIAFARRGLFV 307
ALVTGG SGIG+A+C+ FA G V
Sbjct: 227 ALVTGGDSGIGRAVCLLFAAEGASV 301
Score = 36.3 bits (73), Expect = 0.58
Identities = 15/27 (55%), Positives = 19/27 (70%)
Frame = -2 / -1
Query: 306 TNKPLLAKAIQSAFPMPEAPPVTSADM 226
T+ P AK +A PMPE+PPVTSA +
Sbjct: 300 TDAPSAAKRRHTARPMPESPPVTSATL 220
>gb|BG649359.1|BG649359 EM1_78_E02.b1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 329
Score = 39.6 bits (80), Expect = 0.063
Identities = 16/25 (64%), Positives = 19/25 (76%)
Frame = +2 / +2
Query: 233 ALVTGGASGIGKALCIAFARRGLFV 307
ALVTGG SGIG+A+C+ FA G V
Sbjct: 224 ALVTGGDSGIGRAVCLLFAAEGASV 298
Score = 36.3 bits (73), Expect = 0.58
Identities = 15/27 (55%), Positives = 19/27 (70%)
Frame = -2 / -3
Query: 306 TNKPLLAKAIQSAFPMPEAPPVTSADM 226
T+ P AK +A PMPE+PPVTSA +
Sbjct: 297 TDAPSAAKRRHTARPMPESPPVTSATL 217
>gb|CD223409.1|CD223409 CCC1_27_D09.g1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_27_D09_A007 5', mRNA sequence
Length = 668
Score = 39.6 bits (80), Expect = 0.063
Identities = 16/25 (64%), Positives = 19/25 (76%)
Frame = +2 / +3
Query: 233 ALVTGGASGIGKALCIAFARRGLFV 307
ALVTGG SGIG+A+C+ FA G V
Sbjct: 237 ALVTGGDSGIGRAVCLLFAAEGASV 311
Score = 36.3 bits (73), Expect = 0.58
Identities = 15/27 (55%), Positives = 19/27 (70%)
Frame = -2 / -2
Query: 306 TNKPLLAKAIQSAFPMPEAPPVTSADM 226
T+ P AK +A PMPE+PPVTSA +
Sbjct: 310 TDAPSAAKRRHTARPMPESPPVTSATL 230
>gb|CD226401.1|CD226401 CCC1_45_H08.g1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_45_H08_A007 5', mRNA sequence
Length = 655
Score = 39.6 bits (80), Expect = 0.063
Identities = 16/25 (64%), Positives = 19/25 (76%)
Frame = +2 / +3
Query: 233 ALVTGGASGIGKALCIAFARRGLFV 307
ALVTGG SGIG+A+C+ FA G V
Sbjct: 231 ALVTGGDSGIGRAVCLLFAAEGASV 305
Score = 36.3 bits (73), Expect = 0.58
Identities = 15/27 (55%), Positives = 19/27 (70%)
Frame = -2 / -1
Query: 306 TNKPLLAKAIQSAFPMPEAPPVTSADM 226
T+ P AK +A PMPE+PPVTSA +
Sbjct: 304 TDAPSAAKRRHTARPMPESPPVTSATL 224
>gb|CD228076.1|CD228076 CCC1_5_E03.g1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_5_E03_A007 5', mRNA sequence
Length = 484
Score = 39.6 bits (80), Expect = 0.063
Identities = 18/50 (36%), Positives = 25/50 (50%)
Frame = +2 / +2
Query: 233 ALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVATLVQKENSKFH 382
A+VTGG GIG +C A G+ V + E+ G E + + N FH
Sbjct: 113 AVVTGGNRGIGLEICKQLASNGVTVVLTARDEKRGAEAVSTLGLSNVVFH 262
>gb|CD228268.1|CD228268 CCC1_6_C09.g1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_6_C09_A007 5', mRNA sequence
Length = 530
Score = 39.6 bits (80), Expect = 0.063
Identities = 16/25 (64%), Positives = 19/25 (76%)
Frame = +2 / +2
Query: 233 ALVTGGASGIGKALCIAFARRGLFV 307
ALVTGG SGIG+A+C+ FA G V
Sbjct: 236 ALVTGGDSGIGRAVCLLFAAEGASV 310
Score = 36.3 bits (73), Expect = 0.58
Identities = 15/27 (55%), Positives = 19/27 (70%)
Frame = -2 / -3
Query: 306 TNKPLLAKAIQSAFPMPEAPPVTSADM 226
T+ P AK +A PMPE+PPVTSA +
Sbjct: 309 TDAPSAAKRRHTARPMPESPPVTSATL 229
>gb|CD228465.1|CD228465 CCC1_7_B11.g1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_7_B11_A007 5', mRNA sequence
Length = 591
Score = 39.6 bits (80), Expect = 0.063
Identities = 16/25 (64%), Positives = 19/25 (76%)
Frame = +2 / +3
Query: 233 ALVTGGASGIGKALCIAFARRGLFV 307
ALVTGG SGIG+A+C+ FA G V
Sbjct: 237 ALVTGGDSGIGRAVCLLFAAEGASV 311
Score = 36.3 bits (73), Expect = 0.58
Identities = 15/27 (55%), Positives = 19/27 (70%)
Frame = -2 / -3
Query: 306 TNKPLLAKAIQSAFPMPEAPPVTSADM 226
T+ P AK +A PMPE+PPVTSA +
Sbjct: 310 TDAPSAAKRRHTARPMPESPPVTSATL 230
>gb|CD229773.1|CD229773 CCC1_19_B01.g1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_19_B01_A007 5', mRNA sequence
Length = 525
Score = 39.6 bits (80), Expect = 0.063
Identities = 16/25 (64%), Positives = 19/25 (76%)
Frame = +2 / +3
Query: 233 ALVTGGASGIGKALCIAFARRGLFV 307
ALVTGG SGIG+A+C+ FA G V
Sbjct: 246 ALVTGGDSGIGRAVCLLFAAEGASV 320
Score = 36.3 bits (73), Expect = 0.58
Identities = 15/27 (55%), Positives = 19/27 (70%)
Frame = -2 / -3
Query: 306 TNKPLLAKAIQSAFPMPEAPPVTSADM 226
T+ P AK +A PMPE+PPVTSA +
Sbjct: 319 TDAPSAAKRRHTARPMPESPPVTSATL 239
>gb|CF489770.1|CF489770 POL1_59_B11.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_59_B11_A002 5', mRNA sequence
Length = 768
Score = 39.6 bits (80), Expect = 0.063
Identities = 16/25 (64%), Positives = 19/25 (76%)
Frame = +2 / +2
Query: 233 ALVTGGASGIGKALCIAFARRGLFV 307
ALVTGG SGIG+A+C+ FA G V
Sbjct: 680 ALVTGGDSGIGRAVCLLFAAEGASV 754
Score = 36.3 bits (73), Expect = 0.58
Identities = 15/27 (55%), Positives = 19/27 (70%)
Frame = -2 / -1
Query: 306 TNKPLLAKAIQSAFPMPEAPPVTSADM 226
T+ P AK +A PMPE+PPVTSA +
Sbjct: 753 TDAPSAAKRRHTARPMPESPPVTSATL 673
>gb|BZ342488.1|BZ342488 ic83h06.b1 WGS-SbicolorF (JM107 adapted methyl filtered) Sorghum
bicolor genomic clone ic83h06 5', DNA sequence
Length = 650
Score = 39.1 bits (79), Expect = 0.086
Identities = 16/38 (42%), Positives = 22/38 (57%)
Frame = +2 / -3
Query: 224 GMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENG 337
G A+VTGGA GIG+A+ F + G V + D + G
Sbjct: 120 GKVAIVTGGARGIGEAIVRLFVKHGARVVIADIDDAAG 7
Score = 38.2 bits (77), Expect = 0.16
Identities = 16/38 (42%), Positives = 19/38 (50%)
Frame = -2 / +2
Query: 336 PFSSEKSTTVTNKPLLAKAIQSAFPMPEAPPVTSADMP 223
P +S S T P ++ A PMP APPVT A P
Sbjct: 8 PAASSMSAITTRAPCFTNSLTMASPMPLAPPVTMATFP 121
>gb|CW354344.1|CW354344 fsbb001f017i07k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f017i07, DNA
sequence
Length = 745
Score = 39.1 bits (79), Expect = 0.086
Identities = 22/56 (39%), Positives = 25/56 (44%)
Frame = +2 / +3
Query: 224 GMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVATLVQKENSKFHGDL 391
G ALVTGG SGIG A+ F + G V + E E TL GDL
Sbjct: 552 GKVALVTGGGSGIGLAIARRFVQEGAHVFITGRREALLAEAVTLTGGRIEAIAGDL 719
>gb|BE361308.1|BE361308 DG1_71_D06.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 248
Score = 39.1 bits (79), Expect = 0.086
Identities = 22/64 (34%), Positives = 30/64 (46%)
Frame = +2 / +2
Query: 245 GGASGIGKALCIAFARRGLFVTVVDFSEENGREVATLVQKENSKFHGDLRIPSSIFVKCD 424
G ASGIGKA F R G V + D ++ GR VA + S D+ + I D
Sbjct: 11 GAASGIGKATAAEFVRNGAKVILADVQDDAGRAVAAELGPAASYTRCDVTDEAQIAAAVD 190
Query: 425 VSNA 436
++ A
Sbjct: 191 LAVA 202
>gb|CF482713.1|CF482713 POL1_8_E03.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_8_E03_A002 5', mRNA sequence
Length = 712
Score = 30.9 bits (61), Expect(2) = 0.12
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = +2 / +2
Query: 233 ALVTGGASGIGKALCIAFARRGLFVTV 313
A+VTG + GIG+A+ +A + G V V
Sbjct: 260 AVVTGASRGIGRAIAVALGKAGCKVIV 340
Score = 25.4 bits (49), Expect(2) = 0.12
Identities = 11/44 (25%), Positives = 21/44 (47%)
Frame = +2 / +2
Query: 401 SSIFVKCDVSNADNLAACFEKHVQTYNGLDICINCAGIANKTLV 532
++I DVS ++ + + + LD+ +N AGI L+
Sbjct: 404 TAISFAADVSCEADVESMMRAAIDAWGALDVLVNNAGITRDALL 535
>gb|CW265553.1|CW265553 104_734_11231943_116_35259_050 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11231943, DNA
sequence
Length = 698
Score = 38.2 bits (77), Expect = 0.16
Identities = 15/43 (34%), Positives = 25/43 (58%)
Frame = -2 / +3
Query: 336 PFSSEKSTTVTNKPLLAKAIQSAFPMPEAPPVTSADMPGLSSI 208
P S + T PLLA + ++ P+P PPVT+A +P +++
Sbjct: 33 PLFSSLAVKTTVMPLLASCLHTSSPIPLFPPVTTATLPKYTTV 161
Score = 33.6 bits (67), Expect = 3.9
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = +2 / -2
Query: 224 GMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENG 337
G A+VTGG GIG +C A G+ V + E+ G
Sbjct: 145 GRVAVVTGGNKGIGLEVCRQLASNGITVVLTARDEKRG 32
>gb|CW268009.1|CW268009 104_738_11401050_148_35300_071 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11401050, DNA
sequence
Length = 675
Score = 38.2 bits (77), Expect = 0.16
Identities = 15/43 (34%), Positives = 25/43 (58%)
Frame = -2 / +2
Query: 336 PFSSEKSTTVTNKPLLAKAIQSAFPMPEAPPVTSADMPGLSSI 208
P S + T PLLA + ++ P+P PPVT+A +P +++
Sbjct: 50 PLFSSLAVKTTVMPLLASCLHTSSPIPLFPPVTTATLPKYTTV 178
Score = 33.6 bits (67), Expect = 3.9
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = +2 / -1
Query: 224 GMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENG 337
G A+VTGG GIG +C A G+ V + E+ G
Sbjct: 162 GRVAVVTGGNKGIGLEVCRQLASNGITVVLTARDEKRG 49
>gb|CW268942.1|CW268942 104_740_11401609_148_36230_015 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11401609, DNA
sequence
Length = 751
Score = 38.2 bits (77), Expect = 0.16
Identities = 15/43 (34%), Positives = 25/43 (58%)
Frame = -2 / +1
Query: 336 PFSSEKSTTVTNKPLLAKAIQSAFPMPEAPPVTSADMPGLSSI 208
P S + T PLLA + ++ P+P PPVT+A +P +++
Sbjct: 61 PLFSSLAVKTTVMPLLASCLHTSSPIPLFPPVTTATLPKYTTV 189
Score = 33.6 bits (67), Expect = 3.9
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = +2 / -3
Query: 224 GMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENG 337
G A+VTGG GIG +C A G+ V + E+ G
Sbjct: 173 GRVAVVTGGNKGIGLEVCRQLASNGITVVLTARDEKRG 60
>gb|CF482234.1|CF482234 POL1_5_F01.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_5_F01_A002 5', mRNA sequence
Length = 770
Score = 30.9 bits (61), Expect(2) = 0.17
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = +2 / +1
Query: 224 GMSALVTGGASGIGKALCIAFARRGLFVTVV 316
G +ALVTGG SGI + AR G V ++
Sbjct: 118 GKAALVTGGGSGICFEIAAQLARHGAQVAIM 210
Score = 27.2 bits (53), Expect(2) = 0.17
Identities = 15/36 (41%), Positives = 19/36 (52%)
Frame = +2 / +1
Query: 650 GVIINIGSAAGLYPMFLDPVYSAAKGGVVMFTRSLS 757
G+IINI + + SAAK GV TRSL+
Sbjct: 526 GLIINISATLHYTASWYQIHVSAAKAGVDSITRSLA 633
>gb|CN146812.1|CN146812 WOUND1_43_H01.g1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_43_H01_A002 5', mRNA sequence
Length = 797
Score = 30.9 bits (61), Expect(2) = 0.17
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = +2 / +1
Query: 224 GMSALVTGGASGIGKALCIAFARRGLFVTVV 316
G +ALVTGG SGI + AR G V ++
Sbjct: 217 GKAALVTGGGSGICFEIAAQLARHGAQVAIM 309
Score = 27.2 bits (53), Expect(2) = 0.17
Identities = 15/36 (41%), Positives = 19/36 (52%)
Frame = +2 / +1
Query: 650 GVIINIGSAAGLYPMFLDPVYSAAKGGVVMFTRSLS 757
G+IINI + + SAAK GV TRSL+
Sbjct: 625 GLIINISATLHYTASWYQIHVSAAKAGVDSITRSLA 732
>gb|CN150675.1|CN150675 WOUND1_70_F06.g1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_70_F06_A002 5', mRNA sequence
Length = 852
Score = 30.9 bits (61), Expect(2) = 0.19
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = +2 / +1
Query: 224 GMSALVTGGASGIGKALCIAFARRGLFVTVV 316
G +ALVTGG SGI + AR G V ++
Sbjct: 199 GKAALVTGGGSGICFEIAAQLARHGAQVAIM 291
Score = 27.2 bits (53), Expect(2) = 0.19
Identities = 15/36 (41%), Positives = 19/36 (52%)
Frame = +2 / +1
Query: 650 GVIINIGSAAGLYPMFLDPVYSAAKGGVVMFTRSLS 757
G+IINI + + SAAK GV TRSL+
Sbjct: 607 GLIINISATLHYTASWYQIHVSAAKAGVDSITRSLA 714
>gb|BF481092.1|BF481092 FM1_16_C09.b1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 471
Score = 34.1 bits (68), Expect(2) = 0.19
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = -2 / -3
Query: 336 PFSSEKSTTVTNKPLLAKAIQSAFPMPEAPPVTSADM 226
P S + T PLLA + ++ P+P PPVT+A +
Sbjct: 217 PLFSSLAVKTTVMPLLASCLHTSSPIPLFPPVTTATL 107
Score = 23.1 bits (44), Expect(2) = 0.19
Identities = 7/12 (58%), Positives = 11/12 (91%)
Frame = -2 / -3
Query: 741 NITTPPFAALYT 706
+++TPP AAL+T
Sbjct: 388 SVSTPPIAALFT 353
>gb|BG465729.1|BG465729 RHIZ2_47_H11.b1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 471
Score = 34.1 bits (68), Expect(2) = 0.19
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = -2 / -1
Query: 336 PFSSEKSTTVTNKPLLAKAIQSAFPMPEAPPVTSADM 226
P S + T PLLA + ++ P+P PPVT+A +
Sbjct: 210 PLFSSLAVKTTVMPLLASCLHTSSPIPLFPPVTTATL 100
Score = 23.1 bits (44), Expect(2) = 0.19
Identities = 7/12 (58%), Positives = 11/12 (91%)
Frame = -2 / -1
Query: 741 NITTPPFAALYT 706
+++TPP AAL+T
Sbjct: 381 SVSTPPIAALFT 346
>gb|CD221138.1|CD221138 CCC1_73_D04.g1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_73_D04_A007 5', mRNA sequence
Length = 751
Score = 35.4 bits (71), Expect = 1.1
Identities = 16/44 (36%), Positives = 22/44 (50%)
Frame = -2 / -2
Query: 354 NVATSLPFSSEKSTTVTNKPLLAKAIQSAFPMPEAPPVTSADMP 223
+ AT+ FS + T + P A+ A PMP PVT+A P
Sbjct: 375 SAATAASFSGLRPTRTSPSPAAARRKAMARPMPSVAPVTTAQAP 244
Score = 34.5 bits (69), Expect(2) = 0.22
Identities = 17/51 (33%), Positives = 27/51 (52%)
Frame = +2 / +2
Query: 224 GMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVATLVQKENSK 376
G A+VTG GIG+A+ A GL + +V + E VA ++ ++ K
Sbjct: 245 GAWAVVTGATDGIGRAIAFRLAAAGLGLVLVGRNPEKLAAVAAEIKAKHPK 397
Score = 23.1 bits (44), Expect(2) = 0.22
Identities = 8/14 (57%), Positives = 11/14 (78%)
Frame = +2 / +2
Query: 638 QKKPGVIINIGSAA 679
++K G I+NIGS A
Sbjct: 638 ERKRGAIVNIGSGA 679
>gb|CG993104.1|CG993104 pSB1028 Sorghum propinquum RFLP probe Sorghum propinquum genomic,
DNA sequence
Length = 342
Score = 37.7 bits (76), Expect = 0.22
Identities = 14/45 (31%), Positives = 27/45 (60%)
Frame = +2 / +1
Query: 236 LVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVATLVQKEN 370
+VTGG G+G +C A +G+ V + E+ G++ A +++E+
Sbjct: 1 VVTGGNKGVGLEVCRQLAHKGVTVILTARDEKRGKDAAETLRRES 135
>gb|CL173220.1|CL173220 104_376_10890726_116_31795_246 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10890726, DNA
sequence
Length = 737
Score = 37.7 bits (76), Expect = 0.22
Identities = 15/46 (32%), Positives = 27/46 (58%)
Frame = +2 / -3
Query: 233 ALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVATLVQKEN 370
A+VTGG G+G +C A +G+ V + E+ G+ A +++E+
Sbjct: 684 AVVTGGNKGVGLEVCRQLAHKGVTVILTARDEKRGKYAAETLRRES 547
>gb|CW218756.1|CW218756 104_652_11196359_116_37528_088 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11196359, DNA
sequence
Length = 706
Score = 37.7 bits (76), Expect = 0.22
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = -2 / -1
Query: 336 PFSSEKSTTVTNKPLLAKAIQSAFPMPEAPPVTSADM 226
PF + + T PLLA +Q + P+P PPVT+A +
Sbjct: 376 PFFASLAVRTTRTPLLASCLQISSPIPLFPPVTTATL 266
>gb|CW287974.1|CW287974 104_766_11411702_148_37442_059 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11411702, DNA
sequence
Length = 615
Score = 37.7 bits (76), Expect = 0.22
Identities = 17/35 (48%), Positives = 22/35 (62%)
Frame = +2 / -2
Query: 653 VIINIGSAAGLYPMFLDPVYSAAKGGVVMFTRSLS 757
V++N+ S AGL VYSA KGG+ TRSL+
Sbjct: 539 VVVNVSSIAGLVAYPALAVYSATKGGLNQLTRSLA 435
>gb|CW295746.1|CW295746 104_777_11461111_116_35620_028 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11461111, DNA
sequence
Length = 514
Score = 37.7 bits (76), Expect = 0.22
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = -2 / +2
Query: 336 PFSSEKSTTVTNKPLLAKAIQSAFPMPEAPPVTSADM 226
PF + + T PLLA +Q + P+P PPVT+A +
Sbjct: 269 PFFASLAVRTTRTPLLASCLQISSPIPLFPPVTTATL 379
Score = 31.3 bits (62), Expect(2) = 3.1
Identities = 14/43 (32%), Positives = 21/43 (48%)
Frame = +2 / -2
Query: 233 ALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVATLVQ 361
A+VTGG GIG +C A G+ V + + G + +Q
Sbjct: 372 AVVTGGNRGIGLEICRQLASNGVLVVLTARDAKKGSQAVEELQ 244
Score = 21.7 bits (41), Expect(2) = 3.1
Identities = 9/33 (27%), Positives = 17/33 (51%)
Frame = +2 / -2
Query: 407 IFVKCDVSNADNLAACFEKHVQTYNGLDICINC 505
IF + DV++ ++ E + LDI ++C
Sbjct: 222 IFHRLDVADRSSITQLAEFVKSRFGKLDILVSC 124
>gb|CW322127.1|CW322127 104_815_11475924_148_35943_036 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11475924, DNA
sequence
Length = 695
Score = 37.7 bits (76), Expect = 0.22
Identities = 17/35 (48%), Positives = 22/35 (62%)
Frame = +2 / -2
Query: 653 VIINIGSAAGLYPMFLDPVYSAAKGGVVMFTRSLS 757
V++N+ S AGL VYSA KGG+ TRSL+
Sbjct: 523 VVVNVSSIAGLVAYPALAVYSATKGGLNQLTRSLA 419
>gb|CW439489.1|CW439489 fsbb001f157k15f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f157k15, DNA
sequence
Length = 693
Score = 37.7 bits (76), Expect = 0.22
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = -2 / +2
Query: 336 PFSSEKSTTVTNKPLLAKAIQSAFPMPEAPPVTSADM 226
PF + + T PLLA +Q + P+P PPVT+A +
Sbjct: 323 PFFASLAVRTTRTPLLASCLQISSPIPLFPPVTTATL 433
>gb|CN151960.1|CN151960 WOUND1_78_G07.g1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_78_G07_A002 5', mRNA sequence
Length = 481
Score = 37.7 bits (76), Expect = 0.22
Identities = 20/58 (34%), Positives = 28/58 (48%)
Frame = +2 / +3
Query: 212 ELKPGMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVATLVQKENSKFHG 385
+L G +ALVTGG SGIG + AR G V ++ E + ++ E K G
Sbjct: 132 DLLRGKAALVTGGGSGIGFEIATQLARHGAHVALMGRRREVLNKAVAALRSEGLKAVG 305
Score = 35.4 bits (71), Expect = 1.1
Identities = 15/36 (41%), Positives = 20/36 (55%)
Frame = -2 / -1
Query: 330 SSEKSTTVTNKPLLAKAIQSAFPMPEAPPVTSADMP 223
S + + T P A + + PMPE PPVTSA +P
Sbjct: 250 SRRRPMSATCAPWRASCVAISKPMPEPPPVTSAALP 143
>gb|AY502982.1| Sorghum arundinaceum clone 1028-LWA4 RFLP probe pSB1028
Length = 324
Score = 37.7 bits (76), Expect = 0.22
Identities = 14/45 (31%), Positives = 27/45 (60%)
Frame = +2 / +1
Query: 236 LVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVATLVQKEN 370
+VTGG G+G +C A +G+ V + E+ G++ A +++E+
Sbjct: 1 VVTGGNKGVGLEVCRQLAHKGVTVILTARDEKRGKDAAETLRRES 135
>gb|AW924488.1|AW924488 WS1_70_C03.b1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 566
Score = 34.1 bits (68), Expect(2) = 0.23
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = -2 / -2
Query: 336 PFSSEKSTTVTNKPLLAKAIQSAFPMPEAPPVTSADM 226
P S + T PLLA + ++ P+P PPVT+A +
Sbjct: 175 PLFSSLAVKTTVMPLLASCLHTSSPIPLFPPVTTATL 65
Score = 23.1 bits (44), Expect(2) = 0.23
Identities = 7/12 (58%), Positives = 11/12 (91%)
Frame = -2 / -2
Query: 741 NITTPPFAALYT 706
+++TPP AAL+T
Sbjct: 346 SVSTPPIAALFT 311
>gb|BG052970.1|BG052970 RHIZ2_15_F10.b1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 568
Score = 36.8 bits (74), Expect = 0.42
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = -2 / -3
Query: 330 SSEKSTTVTNKPLLAKAIQSAFPMPEAPPVTSADMPGL 217
S+ ++ T +P A++ Q + PMPE PVTS P +
Sbjct: 188 SARRAAATTRQPARARSRQKSRPMPEEAPVTSTTCPSI 75
Score = 33.6 bits (67), Expect(2) = 0.23
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = +2 / +1
Query: 224 GMSALVTGGASGIGKALCIAFARRG 298
G LVTG +SGIG+ C+ AR G
Sbjct: 82 GQVVLVTGASSGIGRDFCLDLARAG 156
Score = 23.5 bits (45), Expect(2) = 0.23
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +2 / +1
Query: 629 MRNQKKPGVIINIGSAAGL 685
MR+ K G ++NI S AGL
Sbjct: 472 MRDAKLYGSVVNITSIAGL 528
>gb|CN131211.1|CN131211 RHOH1_46_C03.g1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_46_C03_A002 5', mRNA sequence
Length = 818
Score = 35.4 bits (71), Expect = 1.1
Identities = 16/44 (36%), Positives = 22/44 (50%)
Frame = -2 / -3
Query: 354 NVATSLPFSSEKSTTVTNKPLLAKAIQSAFPMPEAPPVTSADMP 223
+ AT+ FS + T + P A+ A PMP PVT+A P
Sbjct: 363 SAATAASFSGLRPTRTSPSPAAARRKAMARPMPSVAPVTTAQAP 232
Score = 34.5 bits (69), Expect(2) = 0.24
Identities = 17/51 (33%), Positives = 27/51 (52%)
Frame = +2 / +2
Query: 224 GMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVATLVQKENSK 376
G A+VTG GIG+A+ A GL + +V + E VA ++ ++ K
Sbjct: 233 GAWAVVTGATDGIGRAIAFRLAAAGLGLVLVGRNPEKLAAVAAEIKAKHPK 385
Score = 23.1 bits (44), Expect(2) = 0.24
Identities = 8/14 (57%), Positives = 11/14 (78%)
Frame = +2 / +2
Query: 638 QKKPGVIINIGSAA 679
++K G I+NIGS A
Sbjct: 626 ERKRGAIVNIGSGA 667
>gb|CX616554.1|CX616554 GABR1_28_D01.g1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_28_D01_A002 5', mRNA sequence
Length = 712
Score = 36.8 bits (74), Expect = 0.42
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = -2 / -2
Query: 330 SSEKSTTVTNKPLLAKAIQSAFPMPEAPPVTSADMPGL 217
S+ ++ T +P A++ Q + PMPE PVTS P +
Sbjct: 198 SARRAAATTRQPARARSRQKSRPMPEEAPVTSTTCPSI 85
Score = 33.6 bits (67), Expect(2) = 0.29
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = +2 / +2
Query: 224 GMSALVTGGASGIGKALCIAFARRG 298
G LVTG +SGIG+ C+ AR G
Sbjct: 92 GQVVLVTGASSGIGRDFCLDLARAG 166
Score = 23.5 bits (45), Expect(2) = 0.29
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +2 / +2
Query: 629 MRNQKKPGVIINIGSAAGL 685
MR+ K G ++NI S AGL
Sbjct: 482 MRDAKLYGSVVNITSIAGL 538
>gb|BZ340408.1|BZ340408 ic38g06.g1 WGS-SbicolorF (JM107 adapted methyl filtered) Sorghum
bicolor genomic clone ic38g06 5', DNA sequence
Length = 530
Score = 37.3 bits (75), Expect = 0.31
Identities = 16/49 (32%), Positives = 24/49 (48%)
Frame = -2 / -2
Query: 336 PFSSEKSTTVTNKPLLAKAIQSAFPMPEAPPVTSADMPGLSSISPAQGW 190
P +S +T T +P A A P P PPV ++ P + S +P G+
Sbjct: 439 PRASSTPSTGTTRPWCAIACTGPTPKPAPPPVPCSNAPAMRSTNPGTGY 293
>gb|BH245610.2|BH245610 pSB1028 S. bicolor BTx623 PstI-digested total genomic DNA library
Sorghum bicolor genomic clone pSB1028 similar to
putative carbonyl reductase (AAD03380), DNA sequence
Length = 943
Score = 37.3 bits (75), Expect = 0.31
Identities = 15/47 (31%), Positives = 27/47 (57%)
Frame = +2 / +2
Query: 230 SALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVATLVQKEN 370
S +VTGG G+G +C A +G+ V + E+ G+ A +++E+
Sbjct: 452 SRVVTGGNKGVGLEVCRQLAHKGVTVILTARDEKRGKYAAETLRRES 592
>gb|CL161477.1|CL161477 104_353_10805748_114_31828_036 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10805748, DNA
sequence
Length = 759
Score = 37.3 bits (75), Expect = 0.31
Identities = 17/50 (34%), Positives = 25/50 (50%)
Frame = +2 / +3
Query: 233 ALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVATLVQKENSKFH 382
A+VTGG GIG +C A G+ V + E+ G E + + + FH
Sbjct: 588 AVVTGGNRGIGLEICKQLASNGVTVVLTARDEKRGAEAVSTLGLSHVVFH 737
>gb|CL183061.1|CL183061 104_395_10897923_114_31917_147 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10897923, DNA
sequence
Length = 746
Score = 37.3 bits (75), Expect = 0.31
Identities = 14/37 (37%), Positives = 23/37 (62%)
Frame = -2 / -2
Query: 336 PFSSEKSTTVTNKPLLAKAIQSAFPMPEAPPVTSADM 226
PF S ++ +T PL A + ++ P+P PPVT+A +
Sbjct: 208 PFLSSRAVRITMTPLEASCLHTSSPIPLFPPVTTATL 98
Score = 34.5 bits (69), Expect = 2.1
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = +2 / +3
Query: 233 ALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVATLV 358
A+VTGG GIG +C A RG+ V + E G + ++
Sbjct: 105 AVVTGGNKGIGLEVCRQLASRGVMVILTARDERKGSKAVGML 230
>gb|CW041119.1|CW041119 104_274_10506409_116_30479 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10506409, DNA
sequence
Length = 608
Score = 37.3 bits (75), Expect = 0.31
Identities = 14/37 (37%), Positives = 23/37 (62%)
Frame = -2 / +2
Query: 336 PFSSEKSTTVTNKPLLAKAIQSAFPMPEAPPVTSADM 226
PF S ++ +T PL A + ++ P+P PPVT+A +
Sbjct: 26 PFLSSRAVRITMTPLEASCLHTSSPIPLFPPVTTATL 136
Score = 34.5 bits (69), Expect = 2.1
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = +2 / -3
Query: 233 ALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVATLV 358
A+VTGG GIG +C A RG+ V + E G + ++
Sbjct: 129 AVVTGGNKGIGLEVCRQLASRGVMVILTARDERKGSKAVGML 4
>gb|CW041120.1|CW041120 104_274_10506409_116_30481 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10506409, DNA
sequence
Length = 590
Score = 37.3 bits (75), Expect = 0.31
Identities = 14/37 (37%), Positives = 23/37 (62%)
Frame = -2 / +2
Query: 336 PFSSEKSTTVTNKPLLAKAIQSAFPMPEAPPVTSADM 226
PF S ++ +T PL A + ++ P+P PPVT+A +
Sbjct: 26 PFLSSRAVRITMTPLEASCLHTSSPIPLFPPVTTATL 136
Score = 34.5 bits (69), Expect = 2.1
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = +2 / -3
Query: 233 ALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVATLV 358
A+VTGG GIG +C A RG+ V + E G + ++
Sbjct: 129 AVVTGGNKGIGLEVCRQLASRGVMVILTARDERKGSKAVGML 4
>gb|CW070019.1|CW070019 104_320_10526433_1_30088 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10526433, DNA
sequence
Length = 645
Score = 37.3 bits (75), Expect = 0.31
Identities = 14/37 (37%), Positives = 23/37 (62%)
Frame = -2 / +3
Query: 336 PFSSEKSTTVTNKPLLAKAIQSAFPMPEAPPVTSADM 226
PF S ++ +T PL A + ++ P+P PPVT+A +
Sbjct: 294 PFLSSRAVRITMTPLEASCLHTSSPIPLFPPVTTATL 404
Score = 34.5 bits (69), Expect = 2.1
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = +2 / -3
Query: 233 ALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVATLV 358
A+VTGG GIG +C A RG+ V + E G + ++
Sbjct: 397 AVVTGGNKGIGLEVCRQLASRGVMVILTARDERKGSKAVGML 272
>gb|CW119136.1|CW119136 104_496_11108595_148_34632_016 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11108595, DNA
sequence
Length = 582
Score = 37.3 bits (75), Expect = 0.31
Identities = 14/37 (37%), Positives = 23/37 (62%)
Frame = -2 / -2
Query: 336 PFSSEKSTTVTNKPLLAKAIQSAFPMPEAPPVTSADM 226
PF S ++ +T PL A + ++ P+P PPVT+A +
Sbjct: 260 PFLSSRAVRITMTPLEASCLHTSSPIPLFPPVTTATL 150
Score = 34.5 bits (69), Expect = 2.1
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = +2 / +1
Query: 233 ALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVATLV 358
A+VTGG GIG +C A RG+ V + E G + ++
Sbjct: 157 AVVTGGNKGIGLEVCRQLASRGVMVILTARDERKGSKAVGML 282
>gb|CW226715.1|CW226715 104_664_11205033_116_37215_033 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11205033, DNA
sequence
Length = 601
Score = 37.3 bits (75), Expect = 0.31
Identities = 14/37 (37%), Positives = 23/37 (62%)
Frame = -2 / -2
Query: 336 PFSSEKSTTVTNKPLLAKAIQSAFPMPEAPPVTSADM 226
PF S ++ +T PL A + ++ P+P PPVT+A +
Sbjct: 495 PFLSSRAVRITMTPLEASCLHTSSPIPLFPPVTTATL 385
Score = 34.5 bits (69), Expect = 2.1
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = +2 / +2
Query: 233 ALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVATLV 358
A+VTGG GIG +C A RG+ V + E G + ++
Sbjct: 392 AVVTGGNKGIGLEVCRQLASRGVMVILTARDERKGSKAVGML 517
>gb|CW263395.1|CW263395 104_731_11230669_116_35211_053 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11230669, DNA
sequence
Length = 366
Score = 37.3 bits (75), Expect = 0.31
Identities = 16/51 (31%), Positives = 28/51 (54%)
Frame = +2 / +3
Query: 224 GMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVATLVQKENSK 376
G +TGG+SGIG A+ A R G V+++ + E +Q+++S+
Sbjct: 195 GRHVFITGGSSGIGLAMATAAEREGARVSILARNLARLEEARAAIQRDSSR 347
>gb|CW271971.1|CW271971 104_744_11403246_148_36227_027 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11403246, DNA
sequence
Length = 702
Score = 37.3 bits (75), Expect = 0.31
Identities = 14/37 (37%), Positives = 23/37 (62%)
Frame = -2 / +1
Query: 336 PFSSEKSTTVTNKPLLAKAIQSAFPMPEAPPVTSADM 226
PF S ++ +T PL A + ++ P+P PPVT+A +
Sbjct: 502 PFLSSRAVRITMTPLEASCLHTSSPIPLFPPVTTATL 612
Score = 34.5 bits (69), Expect = 2.1
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = +2 / -2
Query: 233 ALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVATLV 358
A+VTGG GIG +C A RG+ V + E G + ++
Sbjct: 605 AVVTGGNKGIGLEVCRQLASRGVMVILTARDERKGSKAVGML 480
>gb|CW377567.1|CW377567 fsbb001f055p02f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f055p02, DNA
sequence
Length = 613
Score = 37.3 bits (75), Expect = 0.31
Identities = 18/48 (37%), Positives = 26/48 (54%)
Frame = +1 / -2
Query: 622 SNNAKPKEARCHNKHWFSGRSLSYVPRSRI*CGKRGCGYVYKITFSIE 765
S+N + A H +H FS + Y + I GKR CG+V IT ++E
Sbjct: 144 SSNKVKEHAMVH*EHLFSKTNNLYWCKQSIGMGKRTCGHVSPITLNVE 1
>gb|BZ421693.1|BZ421693 id08d07.b1 WGS-SbicolorF (DH5a methyl filtered) Sorghum bicolor
genomic clone id08d07 5', DNA sequence
Length = 574
Score = 36.8 bits (74), Expect = 0.42
Identities = 14/34 (41%), Positives = 22/34 (64%)
Frame = +2 / -2
Query: 233 ALVTGGASGIGKALCIAFARRGLFVTVVDFSEEN 334
A +TG SGIG+A+ AFA G + ++D + E+
Sbjct: 279 AFITGAGSGIGRAMAEAFAANGTHLALLDVNTES 178
>gb|CW513474.1|CW513474 115_4_10511640_1_30021 Sorghum unfiltered library (LibID: 115)
Sorghum bicolor genomic clone 10511640, DNA sequence
Length = 638
Score = 36.8 bits (74), Expect = 0.42
Identities = 15/32 (46%), Positives = 20/32 (62%)
Frame = +2 / -2
Query: 224 GMSALVTGGASGIGKALCIAFARRGLFVTVVD 319
G A+VTGGA GIG+A+ F + G V + D
Sbjct: 97 GKVAIVTGGARGIGEAIVRLFVKHGARVVIAD 2
Score = 34.1 bits (68), Expect = 2.8
Identities = 14/32 (43%), Positives = 16/32 (50%)
Frame = -2 / +3
Query: 318 STTVTNKPLLAKAIQSAFPMPEAPPVTSADMP 223
S T P ++ A PMP APPVT A P
Sbjct: 3 SAITTRAPCFTNSLTMASPMPLAPPVTMATFP 98
>gb|CW235927.1|CW235927 104_691_11215305_148_37401_037 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11215305, DNA
sequence
Length = 716
Score = 36.8 bits (74), Expect = 0.42
Identities = 18/39 (46%), Positives = 23/39 (58%)
Frame = +2 / +1
Query: 641 KKPGVIINIGSAAGLYPMFLDPVYSAAKGGVVMFTRSLS 757
K G IINI S GL YSAAK GV+ FT++++
Sbjct: 442 KMQGKIINIASVVGLTGNVGQANYSAAKAGVIGFTKTVA 558
>gb|CW287928.1|CW287928 104_766_11411679_148_35533_060 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11411679, DNA
sequence
Length = 507
Score = 36.8 bits (74), Expect = 0.42
Identities = 15/45 (33%), Positives = 25/45 (55%)
Frame = +2 / -2
Query: 233 ALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVATLVQKE 367
A+VTGG GIG +C A +G+ V + E+ G++ ++ E
Sbjct: 155 AVVTGGNRGIGLEVCRQLAAQGIMVILTARDEKRGKDAVEFLRHE 21
>gb|CW337498.1|CW337498 104_837_11484202_148_36116_041 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11484202, DNA
sequence
Length = 751
Score = 36.8 bits (74), Expect = 0.42
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = -2 / +1
Query: 330 SSEKSTTVTNKPLLAKAIQSAFPMPEAPPVTSADMPGL 217
S+ ++ T +P A++ Q + PMPE PVTS P +
Sbjct: 109 SARRAAATTRQPARARSRQKSRPMPEEAPVTSTTCPSI 222
Score = 33.6 bits (67), Expect = 3.9
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = +2 / -3
Query: 224 GMSALVTGGASGIGKALCIAFARRG 298
G LVTG +SGIG+ C+ AR G
Sbjct: 215 GQVVLVTGASSGIGRDFCLDLARAG 141
>gb|BF586166.1|BF586166 FM1_26_E06.b1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 470
Score = 36.8 bits (74), Expect = 0.42
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = -2 / -2
Query: 330 SSEKSTTVTNKPLLAKAIQSAFPMPEAPPVTSADMPGL 217
S+ ++ T +P A++ Q + PMPE PVTS P +
Sbjct: 220 SARRAAATTRQPARARSRQKSRPMPEEAPVTSTTCPSI 107
Score = 33.6 bits (67), Expect = 3.9
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = +2 / +3
Query: 224 GMSALVTGGASGIGKALCIAFARRG 298
G LVTG +SGIG+ C+ AR G
Sbjct: 114 GQVVLVTGASSGIGRDFCLDLARAG 188
>gb|BG052958.1|BG052958 RHIZ2_15_E09.b1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 483
Score = 36.8 bits (74), Expect = 0.42
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = -2 / -2
Query: 330 SSEKSTTVTNKPLLAKAIQSAFPMPEAPPVTSADMPGL 217
S+ ++ T +P A++ Q + PMPE PVTS P +
Sbjct: 188 SARRAAATTRQPARARSRQKSRPMPEEAPVTSTTCPSI 75
Score = 33.6 bits (67), Expect = 3.9
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = +2 / +1
Query: 224 GMSALVTGGASGIGKALCIAFARRG 298
G LVTG +SGIG+ C+ AR G
Sbjct: 82 GQVVLVTGASSGIGRDFCLDLARAG 156
>gb|BG052959.1|BG052959 RHIZ2_15_E10.b1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 491
Score = 36.8 bits (74), Expect = 0.42
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = -2 / -1
Query: 330 SSEKSTTVTNKPLLAKAIQSAFPMPEAPPVTSADMPGL 217
S+ ++ T +P A++ Q + PMPE PVTS P +
Sbjct: 188 SARRAAATTRQPARARSRQKSRPMPEEAPVTSTTCPSI 75
Score = 33.6 bits (67), Expect = 3.9
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = +2 / +1
Query: 224 GMSALVTGGASGIGKALCIAFARRG 298
G LVTG +SGIG+ C+ AR G
Sbjct: 82 GQVVLVTGASSGIGRDFCLDLARAG 156
>gb|BG559304.1|BG559304 RHIZ2_53_B11.b1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 506
Score = 36.8 bits (74), Expect = 0.42
Identities = 20/58 (34%), Positives = 28/58 (48%)
Frame = +2 / +2
Query: 212 ELKPGMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVATLVQKENSKFHG 385
+L G +ALVTGG SGIG + AR G V ++ E + ++ E K G
Sbjct: 116 DLLRGKAALVTGGGSGIGFEIATQLARHGAHVALMGRRREVLDKAVAALRSEGLKAVG 289
Score = 35.4 bits (71), Expect = 1.1
Identities = 15/36 (41%), Positives = 20/36 (55%)
Frame = -2 / -3
Query: 330 SSEKSTTVTNKPLLAKAIQSAFPMPEAPPVTSADMP 223
S + + T P A + + PMPE PPVTSA +P
Sbjct: 234 SRRRPMSATCAPWRASCVAISKPMPEPPPVTSAALP 127
>gb|BI075808.1|BI075808 IP1_21_E01.b1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 633
Score = 36.8 bits (74), Expect = 0.42
Identities = 16/48 (33%), Positives = 25/48 (52%)
Frame = +2 / +1
Query: 227 MSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVATLVQKEN 370
++ ++TGGASGIG FA RG V + + E E + ++N
Sbjct: 211 LTVVITGGASGIGLETSRVFALRGAHVVIAARNTEAASEARKTIMEKN 354
>gb|CD204075.1|CD204075 HS1_3_E10.g1_A012 Heat-shocked seedlings Sorghum bicolor cDNA clone
HS1_3_E10_A012 5', mRNA sequence
Length = 711
Score = 36.8 bits (74), Expect = 0.42
Identities = 16/48 (33%), Positives = 25/48 (52%)
Frame = +2 / +1
Query: 227 MSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVATLVQKEN 370
++ ++TGGASGIG FA RG V + + E E + ++N
Sbjct: 232 LTVVITGGASGIGLETSRVFALRGAHVVIAARNTEAASEARKTIMEKN 375
>gb|CD236327.1|CD236327 SS1_33_A08.g1_A012 Salt-stressed seedlings Sorghum bicolor cDNA
clone SS1_33_A08_A012 5', mRNA sequence
Length = 542
Score = 36.8 bits (74), Expect = 0.42
Identities = 16/48 (33%), Positives = 25/48 (52%)
Frame = +2 / +2
Query: 227 MSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVATLVQKEN 370
++ ++TGGASGIG FA RG V + + E E + ++N
Sbjct: 230 LTVVITGGASGIGLETSRVFALRGAHVVIAARNTEAASEARKTIMEKN 373
>gb|CW097786.1|CW097786 104_464_11002654_116_34363_095 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11002654, DNA
sequence
Length = 627
Score = 28.6 bits (56), Expect(2) = 0.55
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = +2 / -2
Query: 26 LQESRRPAPKAPWPRLLP 79
L SRRP +APWP P
Sbjct: 377 LASSRRPRSRAPWPSSAP 324
Score = 25.4 bits (49), Expect(2) = 0.55
Identities = 11/24 (45%), Positives = 13/24 (54%)
Frame = +1 / -2
Query: 55 SSVASSPSPLRPRQFRVPAGASSR 126
SS P+ RPR R P+G SR
Sbjct: 335 SSAPPCPASARPRTCRSPSGRCSR 264
>gb|BZ351200.1|BZ351200 hv19h11.g1 WGS-SbicolorF (JM107 adapted methyl filtered) Sorghum
bicolor genomic clone hv19h11 5', DNA sequence
Length = 519
Score = 36.3 bits (73), Expect = 0.58
Identities = 19/55 (34%), Positives = 27/55 (49%)
Frame = +2 / -2
Query: 212 ELKPGMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVATLVQKENSK 376
+L G +ALVTGG SGIG + AR G V ++ E + ++ E K
Sbjct: 437 DLLRGKAALVTGGGSGIGFEIATQLARHGAHVALMGRRREVLDKAVAALRSEGLK 273
Score = 35.4 bits (71), Expect = 1.1
Identities = 15/36 (41%), Positives = 20/36 (55%)
Frame = -2 / +1
Query: 330 SSEKSTTVTNKPLLAKAIQSAFPMPEAPPVTSADMP 223
S + + T P A + + PMPE PPVTSA +P
Sbjct: 319 SRRRPMSATCAPWRASCVAISKPMPEPPPVTSAALP 426
>gb|CL180131.1|CL180131 104_389_10895779_116_31908_307 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10895779, DNA
sequence
Length = 719
Score = 36.3 bits (73), Expect = 0.58
Identities = 17/42 (40%), Positives = 24/42 (57%)
Frame = +2 / +2
Query: 224 GMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVA 349
G A+VTG GIG+A+ + AR GL + +V S + VA
Sbjct: 551 GTWAVVTGATDGIGRAVALELARAGLHLVLVGRSPDKLARVA 676
Score = 34.1 bits (68), Expect = 2.8
Identities = 16/45 (35%), Positives = 23/45 (51%)
Frame = -2 / -3
Query: 357 TNVATSLPFSSEKSTTVTNKPLLAKAIQSAFPMPEAPPVTSADMP 223
T+ AT S + T+ P A + +A PMP PVT+A +P
Sbjct: 684 TSFATRASLSGLRPTSTRWSPARASSSATARPMPSVAPVTTAHVP 550
>gb|CW280536.1|CW280536 104_755_11407672_116_35444_052 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11407672, DNA
sequence
Length = 617
Score = 36.3 bits (73), Expect = 0.58
Identities = 19/55 (34%), Positives = 27/55 (49%)
Frame = +2 / +3
Query: 212 ELKPGMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVATLVQKENSK 376
+L G +ALVTGG SGIG + AR G V ++ E + ++ E K
Sbjct: 168 DLLRGKAALVTGGGSGIGFEIATQLARHGAHVALMGRRREVLDKAVAALRSEGLK 332
Score = 35.4 bits (71), Expect = 1.1
Identities = 15/36 (41%), Positives = 20/36 (55%)
Frame = -2 / -2
Query: 330 SSEKSTTVTNKPLLAKAIQSAFPMPEAPPVTSADMP 223
S + + T P A + + PMPE PPVTSA +P
Sbjct: 286 SRRRPMSATCAPWRASCVAISKPMPEPPPVTSAALP 179
>gb|CW438504.1|CW438504 fsbb001f156c20k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f156c20, DNA
sequence
Length = 448
Score = 36.3 bits (73), Expect = 0.58
Identities = 19/55 (34%), Positives = 27/55 (49%)
Frame = +2 / +3
Query: 212 ELKPGMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVATLVQKENSK 376
+L G +ALVTGG SGIG + AR G V ++ E + ++ E K
Sbjct: 189 DLLRGKAALVTGGGSGIGFEIATQLARHGAHVALMGRRREVLDKAVAALRSEGLK 353
Score = 35.4 bits (71), Expect = 1.1
Identities = 15/36 (41%), Positives = 20/36 (55%)
Frame = -2 / -1
Query: 330 SSEKSTTVTNKPLLAKAIQSAFPMPEAPPVTSADMP 223
S + + T P A + + PMPE PPVTSA +P
Sbjct: 307 SRRRPMSATCAPWRASCVAISKPMPEPPPVTSAALP 200
>gb|CW450067.1|CW450067 fsbb001f188i08f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f188i08, DNA
sequence
Length = 638
Score = 36.3 bits (73), Expect = 0.58
Identities = 17/42 (40%), Positives = 24/42 (57%)
Frame = +2 / -1
Query: 224 GMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVA 349
G A+VTG GIG+A+ + AR GL + +V S + VA
Sbjct: 320 GTWAVVTGATDGIGRAVALELARAGLHLVLVGRSPDKLARVA 195
Score = 34.1 bits (68), Expect = 2.8
Identities = 16/45 (35%), Positives = 23/45 (51%)
Frame = -2 / +1
Query: 357 TNVATSLPFSSEKSTTVTNKPLLAKAIQSAFPMPEAPPVTSADMP 223
T+ AT S + T+ P A + +A PMP PVT+A +P
Sbjct: 187 TSFATRASLSGLRPTSTRWSPARASSSATARPMPSVAPVTTAHVP 321
>gb|AW285753.2|AW285753 LG1_223_B09.b1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 434
Score = 36.3 bits (73), Expect = 0.58
Identities = 17/42 (40%), Positives = 24/42 (57%)
Frame = +2 / +3
Query: 224 GMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVA 349
G A+VTG GIG+A+ + AR GL + +V S + VA
Sbjct: 201 GTWAVVTGATDGIGRAVALELARAGLHLVLVGRSPDKLARVA 326
Score = 34.1 bits (68), Expect = 2.8
Identities = 16/45 (35%), Positives = 23/45 (51%)
Frame = -2 / -2
Query: 357 TNVATSLPFSSEKSTTVTNKPLLAKAIQSAFPMPEAPPVTSADMP 223
T+ AT S + T+ P A + +A PMP PVT+A +P
Sbjct: 334 TSFATRASLSGLRPTSTRWSPARASSSATARPMPSVAPVTTAHVP 200
>gb|AW285791.2|AW285791 LG1_223_G10.b1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 436
Score = 36.3 bits (73), Expect = 0.58
Identities = 17/42 (40%), Positives = 24/42 (57%)
Frame = +2 / +3
Query: 224 GMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVA 349
G A+VTG GIG+A+ + AR GL + +V S + VA
Sbjct: 201 GTWAVVTGATDGIGRAVALELARAGLHLVLVGRSPDKLARVA 326
Score = 34.1 bits (68), Expect = 2.8
Identities = 16/45 (35%), Positives = 23/45 (51%)
Frame = -2 / -1
Query: 357 TNVATSLPFSSEKSTTVTNKPLLAKAIQSAFPMPEAPPVTSADMP 223
T+ AT S + T+ P A + +A PMP PVT+A +P
Sbjct: 334 TSFATRASLSGLRPTSTRWSPARASSSATARPMPSVAPVTTAHVP 200
>gb|BZ340058.1|BZ340058 ic36e03.g1 WGS-SbicolorF (JM107 adapted methyl filtered) Sorghum
bicolor genomic clone ic36e03 5', DNA sequence
Length = 638
Score = 35.9 bits (72), Expect = 0.80
Identities = 15/30 (50%), Positives = 17/30 (56%)
Frame = -2 / -2
Query: 312 TVTNKPLLAKAIQSAFPMPEAPPVTSADMP 223
T T P A+ +A PMP APPVT A P
Sbjct: 538 TTTRAPSDARCFDTAEPMPPAPPVTKATRP 449
>gb|CL163273.1|CL163273 104_356_10807025_116_31811_161 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10807025, DNA
sequence
Length = 615
Score = 35.9 bits (72), Expect = 0.80
Identities = 16/35 (45%), Positives = 21/35 (60%)
Frame = +2 / +3
Query: 212 ELKPGMSALVTGGASGIGKALCIAFARRGLFVTVV 316
+L G +ALVTGG SGIG + AR G V ++
Sbjct: 501 DLLRGKAALVTGGGSGIGFKIATQLARHGAHVALM 605
Score = 33.1 bits (66), Expect = 5.4
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = -2 / -3
Query: 312 TVTNKPLLAKAIQSAFPMPEAPPVTSADMP 223
+ T P A + PMPE PPVTSA +P
Sbjct: 601 SATCAPWRASCVAILKPMPEPPPVTSAALP 512
>gb|CW106728.1|CW106728 104_476_11096149_116_34468_055 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11096149, DNA
sequence
Length = 702
Score = 35.9 bits (72), Expect = 0.80
Identities = 16/35 (45%), Positives = 21/35 (60%)
Frame = +2 / +3
Query: 212 ELKPGMSALVTGGASGIGKALCIAFARRGLFVTVV 316
+L G +ALVTGG SGIG + AR G V ++
Sbjct: 414 DLLRGKAALVTGGGSGIGFEIATQLARHGAHVALM 518
Score = 35.4 bits (71), Expect = 1.1
Identities = 15/36 (41%), Positives = 20/36 (55%)
Frame = -2 / -3
Query: 330 SSEKSTTVTNKPLLAKAIQSAFPMPEAPPVTSADMP 223
S + + T P A + + PMPE PPVTSA +P
Sbjct: 532 SRRRPMSATCAPWRASCVAISKPMPEPPPVTSAALP 425
>gb|BE364920.1|BE364920 PI1_21_C10.b1_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 306
Score = 35.9 bits (72), Expect = 0.80
Identities = 15/42 (35%), Positives = 24/42 (57%)
Frame = -2 / -3
Query: 357 TNVATSLPFSSEKSTTVTNKPLLAKAIQSAFPMPEAPPVTSA 232
+ A + P S ++ + T +P A+ SA+PMP PVT+A
Sbjct: 160 SGAAAASPRSPSRAVSTTVRPCSARRAASAWPMPRFAPVTTA 35
>gb|BE364921.1|BE364921 PI1_21_B10.b1_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 531
Score = 35.9 bits (72), Expect = 0.80
Identities = 15/42 (35%), Positives = 24/42 (57%)
Frame = -2 / -3
Query: 357 TNVATSLPFSSEKSTTVTNKPLLAKAIQSAFPMPEAPPVTSA 232
+ A + P S ++ + T +P A+ SA+PMP PVT+A
Sbjct: 160 SGAAAASPRSPSRAVSTTVRPCSARRAASAWPMPRFAPVTTA 35
>gb|CD230581.1|CD230581 SS1_44_G06.g1_A012 Salt-stressed seedlings Sorghum bicolor cDNA
clone SS1_44_G06_A012 5', mRNA sequence
Length = 446
Score = 35.9 bits (72), Expect = 0.80
Identities = 15/30 (50%), Positives = 17/30 (56%)
Frame = -2 / -1
Query: 312 TVTNKPLLAKAIQSAFPMPEAPPVTSADMP 223
T T P A+ +A PMP APPVT A P
Sbjct: 185 TTTRAPSEARCFDTAEPMPPAPPVTMATRP 96
>gb|AY502964.1| Sorghum bicolor clone 1028-BTx3197 RFLP probe pSB1028
Length = 342
Score = 35.9 bits (72), Expect = 0.80
Identities = 14/45 (31%), Positives = 26/45 (57%)
Frame = +2 / +1
Query: 236 LVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVATLVQKEN 370
+VTGG G+G +C A +G+ V + E+ G+ A +++E+
Sbjct: 1 VVTGGNKGVGLEVCRQLAHKGVTVILTARDEKRGKYAAETLRRES 135
>gb|AY502965.1| Sorghum bicolor clone 1028-RTx430 RFLP probe pSB1028
Length = 342
Score = 35.9 bits (72), Expect = 0.80
Identities = 14/45 (31%), Positives = 26/45 (57%)
Frame = +2 / +1
Query: 236 LVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVATLVQKEN 370
+VTGG G+G +C A +G+ V + E+ G+ A +++E+
Sbjct: 1 VVTGGNKGVGLEVCRQLAHKGVTVILTARDEKRGKYAAETLRRES 135
>gb|AY502966.1| Sorghum bicolor clone 1028-102069 RFLP probe pSB1028
Length = 331
Score = 35.9 bits (72), Expect = 0.80
Identities = 14/45 (31%), Positives = 26/45 (57%)
Frame = +2 / +1
Query: 236 LVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVATLVQKEN 370
+VTGG G+G +C A +G+ V + E+ G+ A +++E+
Sbjct: 1 VVTGGNKGVGLEVCRQLAHKGVTVILTARDEKRGKYAAETLRRES 135
>gb|AY502967.1| Sorghum bicolor clone 1028-152702 RFLP probe pSB1028
Length = 331
Score = 35.9 bits (72), Expect = 0.80
Identities = 14/45 (31%), Positives = 26/45 (57%)
Frame = +2 / +1
Query: 236 LVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVATLVQKEN 370
+VTGG G+G +C A +G+ V + E+ G+ A +++E+
Sbjct: 1 VVTGGNKGVGLEVCRQLAHKGVTVILTARDEKRGKYAAETLRRES 135
>gb|AY502968.1| Sorghum bicolor clone 1028-195684 RFLP probe pSB1028
Length = 324
Score = 35.9 bits (72), Expect = 0.80
Identities = 14/45 (31%), Positives = 26/45 (57%)
Frame = +2 / +1
Query: 236 LVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVATLVQKEN 370
+VTGG G+G +C A +G+ V + E+ G+ A +++E+
Sbjct: 1 VVTGGNKGVGLEVCRQLAHKGVTVILTARDEKRGKYAAETLRRES 135
>gb|AY502969.1| Sorghum arundinaceum clone 1028-225905 RFLP probe pSB1028
Length = 331
Score = 35.9 bits (72), Expect = 0.80
Identities = 14/45 (31%), Positives = 26/45 (57%)
Frame = +2 / +1
Query: 236 LVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVATLVQKEN 370
+VTGG G+G +C A +G+ V + E+ G+ A +++E+
Sbjct: 1 VVTGGNKGVGLEVCRQLAHKGVTVILTARDEKRGKYAAETLRRES 135
>gb|AY502970.1| Sorghum bicolor clone 1028-22913 RFLP probe pSB1028
Length = 331
Score = 35.9 bits (72), Expect = 0.80
Identities = 14/45 (31%), Positives = 26/45 (57%)
Frame = +2 / +1
Query: 236 LVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVATLVQKEN 370
+VTGG G+G +C A +G+ V + E+ G+ A +++E+
Sbjct: 1 VVTGGNKGVGLEVCRQLAHKGVTVILTARDEKRGKYAAETLRRES 135
>gb|AY502971.1| Sorghum bicolor clone 1028-246712 RFLP probe pSB1028
Length = 324
Score = 35.9 bits (72), Expect = 0.80
Identities = 14/45 (31%), Positives = 26/45 (57%)
Frame = +2 / +1
Query: 236 LVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVATLVQKEN 370
+VTGG G+G +C A +G+ V + E+ G+ A +++E+
Sbjct: 1 VVTGGNKGVGLEVCRQLAHKGVTVILTARDEKRGKYAAETLRRES 135
>gb|AY502972.1| Sorghum bicolor clone 1028-257595 RFLP probe pSB1028
Length = 342
Score = 35.9 bits (72), Expect = 0.80
Identities = 14/45 (31%), Positives = 26/45 (57%)
Frame = +2 / +1
Query: 236 LVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVATLVQKEN 370
+VTGG G+G +C A +G+ V + E+ G+ A +++E+
Sbjct: 1 VVTGGNKGVGLEVCRQLAHKGVTVILTARDEKRGKYAAETLRRES 135
>gb|AY502973.1| Sorghum bicolor clone 1028-267380 RFLP probe pSB1028
Length = 331
Score = 35.9 bits (72), Expect = 0.80
Identities = 14/45 (31%), Positives = 26/45 (57%)
Frame = +2 / +1
Query: 236 LVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVATLVQKEN 370
+VTGG G+G +C A +G+ V + E+ G+ A +++E+
Sbjct: 1 VVTGGNKGVGLEVCRQLAHKGVTVILTARDEKRGKYAAETLRRES 135
>gb|AY502974.1| Sorghum bicolor clone 1028-50875 RFLP probe pSB1028
Length = 342
Score = 35.9 bits (72), Expect = 0.80
Identities = 14/45 (31%), Positives = 26/45 (57%)
Frame = +2 / +1
Query: 236 LVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVATLVQKEN 370
+VTGG G+G +C A +G+ V + E+ G+ A +++E+
Sbjct: 1 VVTGGNKGVGLEVCRQLAHKGVTVILTARDEKRGKYAAETLRRES 135
>gb|AY502975.1| Sorghum bicolor clone 1028-51030 RFLP probe pSB1028
Length = 336
Score = 35.9 bits (72), Expect = 0.80
Identities = 14/45 (31%), Positives = 26/45 (57%)
Frame = +2 / +1
Query: 236 LVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVATLVQKEN 370
+VTGG G+G +C A +G+ V + E+ G+ A +++E+
Sbjct: 1 VVTGGNKGVGLEVCRQLAHKGVTVILTARDEKRGKYAAETLRRES 135
>gb|AY502976.1| Sorghum bicolor clone 1028-514605 RFLP probe pSB1028
Length = 342
Score = 35.9 bits (72), Expect = 0.80
Identities = 14/45 (31%), Positives = 26/45 (57%)
Frame = +2 / +1
Query: 236 LVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVATLVQKEN 370
+VTGG G+G +C A +G+ V + E+ G+ A +++E+
Sbjct: 1 VVTGGNKGVGLEVCRQLAHKGVTVILTARDEKRGKYAAETLRRES 135
>gb|AY502977.1| Sorghum bicolor clone 1028-56003 RFLP probe pSB1028
Length = 342
Score = 35.9 bits (72), Expect = 0.80
Identities = 14/45 (31%), Positives = 26/45 (57%)
Frame = +2 / +1
Query: 236 LVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVATLVQKEN 370
+VTGG G+G +C A +G+ V + E+ G+ A +++E+
Sbjct: 1 VVTGGNKGVGLEVCRQLAHKGVTVILTARDEKRGKYAAETLRRES 135
>gb|AY502978.1| Sorghum bicolor clone 1028-56174 RFLP probe pSB1028
Length = 342
Score = 35.9 bits (72), Expect = 0.80
Identities = 14/45 (31%), Positives = 26/45 (57%)
Frame = +2 / +1
Query: 236 LVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVATLVQKEN 370
+VTGG G+G +C A +G+ V + E+ G+ A +++E+
Sbjct: 1 VVTGGNKGVGLEVCRQLAHKGVTVILTARDEKRGKYAAETLRRES 135
>gb|AY502979.1| Sorghum bicolor clone 1028-77034 RFLP probe pSB1028
Length = 331
Score = 35.9 bits (72), Expect = 0.80
Identities = 14/45 (31%), Positives = 26/45 (57%)
Frame = +2 / +1
Query: 236 LVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVATLVQKEN 370
+VTGG G+G +C A +G+ V + E+ G+ A +++E+
Sbjct: 1 VVTGGNKGVGLEVCRQLAHKGVTVILTARDEKRGKYAAETLRRES 135
>gb|AY502980.1| Sorghum bicolor clone 1028-82459 RFLP probe pSB1028
Length = 342
Score = 35.9 bits (72), Expect = 0.80
Identities = 14/45 (31%), Positives = 26/45 (57%)
Frame = +2 / +1
Query: 236 LVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVATLVQKEN 370
+VTGG G+G +C A +G+ V + E+ G+ A +++E+
Sbjct: 1 VVTGGNKGVGLEVCRQLAHKGVTVILTARDEKRGKYAAETLRRES 135
>gb|AY502981.1| Sorghum bicolor clone 1028-92381 RFLP probe pSB1028
Length = 331
Score = 35.9 bits (72), Expect = 0.80
Identities = 14/45 (31%), Positives = 26/45 (57%)
Frame = +2 / +1
Query: 236 LVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVATLVQKEN 370
+VTGG G+G +C A +G+ V + E+ G+ A +++E+
Sbjct: 1 VVTGGNKGVGLEVCRQLAHKGVTVILTARDEKRGKYAAETLRRES 135
>gb|AY502983.1| Sorghum arundinaceum clone 1028-LWA8 RFLP probe pSB1028
Length = 333
Score = 35.9 bits (72), Expect = 0.80
Identities = 14/45 (31%), Positives = 26/45 (57%)
Frame = +2 / +1
Query: 236 LVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVATLVQKEN 370
+VTGG G+G +C A +G+ V + E+ G+ A +++E+
Sbjct: 1 VVTGGNKGVGLEVCRQLAHKGVTVILTARDEKRGKYAAETLRRES 135
>gb|AY502984.1| Sorghum bicolor clone 1028-RTx406 RFLP probe pSB1028
Length = 342
Score = 35.9 bits (72), Expect = 0.80
Identities = 14/45 (31%), Positives = 26/45 (57%)
Frame = +2 / +1
Query: 236 LVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVATLVQKEN 370
+VTGG G+G +C A +G+ V + E+ G+ A +++E+
Sbjct: 1 VVTGGNKGVGLEVCRQLAHKGVTVILTARDEKRGKYAAETLRRES 135
>gb|AY502985.1| Sorghum bicolor clone 1028-SC0033 RFLP probe pSB1028
Length = 342
Score = 35.9 bits (72), Expect = 0.80
Identities = 14/45 (31%), Positives = 26/45 (57%)
Frame = +2 / +1
Query: 236 LVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVATLVQKEN 370
+VTGG G+G +C A +G+ V + E+ G+ A +++E+
Sbjct: 1 VVTGGNKGVGLEVCRQLAHKGVTVILTARDEKRGKYAAETLRRES 135
>gb|AY502986.1| Sorghum bicolor clone 1028-SC0155 RFLP probe pSB1028
Length = 333
Score = 35.9 bits (72), Expect = 0.80
Identities = 14/45 (31%), Positives = 26/45 (57%)
Frame = +2 / +1
Query: 236 LVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVATLVQKEN 370
+VTGG G+G +C A +G+ V + E+ G+ A +++E+
Sbjct: 1 VVTGGNKGVGLEVCRQLAHKGVTVILTARDEKRGKYAAETLRRES 135
>gb|AY502987.1| Sorghum bicolor clone 1028-SC0326 RFLP probe pSB1028
Length = 333
Score = 35.9 bits (72), Expect = 0.80
Identities = 14/45 (31%), Positives = 26/45 (57%)
Frame = +2 / +1
Query: 236 LVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVATLVQKEN 370
+VTGG G+G +C A +G+ V + E+ G+ A +++E+
Sbjct: 1 VVTGGNKGVGLEVCRQLAHKGVTVILTARDEKRGKYAAETLRRES 135
>gb|AY502988.1| Sorghum bicolor clone 1028-SC0599 RFLP probe pSB1028
Length = 336
Score = 35.9 bits (72), Expect = 0.80
Identities = 14/45 (31%), Positives = 26/45 (57%)
Frame = +2 / +1
Query: 236 LVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVATLVQKEN 370
+VTGG G+G +C A +G+ V + E+ G+ A +++E+
Sbjct: 1 VVTGGNKGVGLEVCRQLAHKGVTVILTARDEKRGKYAAETLRRES 135
>gb|AY502989.1| Sorghum bicolor clone 1028-SC0706 RFLP probe pSB1028
Length = 320
Score = 35.9 bits (72), Expect = 0.80
Identities = 14/45 (31%), Positives = 26/45 (57%)
Frame = +2 / +1
Query: 236 LVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVATLVQKEN 370
+VTGG G+G +C A +G+ V + E+ G+ A +++E+
Sbjct: 1 VVTGGNKGVGLEVCRQLAHKGVTVILTARDEKRGKYAAETLRRES 135
>gb|BI074860.1|BI074860 IP1_16_B05.b1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 571
Score = 30.9 bits (61), Expect(2) = 1.0
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = +2 / +3
Query: 233 ALVTGGASGIGKALCIAFARRGLFVTV 313
A+VTG + GIG+A+ +A + G V V
Sbjct: 279 AVVTGASRGIGRAIAVALGKAGCKVIV 359
Score = 22.1 bits (42), Expect(2) = 1.0
Identities = 10/44 (22%), Positives = 20/44 (45%)
Frame = +2 / +3
Query: 401 SSIFVKCDVSNADNLAACFEKHVQTYNGLDICINCAGIANKTLV 532
++I DVS ++ + + + LD+ +N A I L+
Sbjct: 423 TAISFAADVSCEADVESMMRAAIDAWGALDVLVNNAXITRDALL 554
>gb|CL186076.1|CL186076 104_400_10899974_116_32405_053 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10899974, DNA
sequence
Length = 562
Score = 35.4 bits (71), Expect = 1.1
Identities = 15/30 (50%), Positives = 17/30 (56%)
Frame = -2 / -3
Query: 312 TVTNKPLLAKAIQSAFPMPEAPPVTSADMP 223
T T P A+ +A PMP APPVT A P
Sbjct: 188 TATRAPRDARCFDTAGPMPPAPPVTMATRP 99
>gb|CW099214.1|CW099214 104_466_11003429_116_34380_029 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11003429, DNA
sequence
Length = 699
Score = 35.4 bits (71), Expect = 1.1
Identities = 15/30 (50%), Positives = 17/30 (56%)
Frame = -2 / -2
Query: 312 TVTNKPLLAKAIQSAFPMPEAPPVTSADMP 223
T T P A+ +A PMP APPVT A P
Sbjct: 308 TTTRAPSDARCFDTAEPMPPAPPVTMATRP 219
>gb|CW106729.1|CW106729 104_476_11096149_148_34464_055 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11096149, DNA
sequence
Length = 550
Score = 35.4 bits (71), Expect = 1.1
Identities = 15/36 (41%), Positives = 20/36 (55%)
Frame = -2 / +3
Query: 330 SSEKSTTVTNKPLLAKAIQSAFPMPEAPPVTSADMP 223
S + + T P A + + PMPE PPVTSA +P
Sbjct: 339 SRRRPMSATCAPWRASCLAISKPMPEPPPVTSATLP 446
Score = 33.6 bits (67), Expect = 3.9
Identities = 16/35 (45%), Positives = 20/35 (57%)
Frame = +2 / -1
Query: 212 ELKPGMSALVTGGASGIGKALCIAFARRGLFVTVV 316
+L G ALVTGG SGIG + AR G V ++
Sbjct: 457 DLLRGKVALVTGGGSGIGFEIARQLARHGAHVALM 353
>gb|CW129503.1|CW129503 104_511_11114604_148_34761_038 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11114604, DNA
sequence
Length = 573
Score = 35.4 bits (71), Expect = 1.1
Identities = 15/51 (29%), Positives = 27/51 (52%)
Frame = +2 / +2
Query: 224 GMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVATLVQKENSK 376
G +TGG+SGIG A+ A AR G V+++ + E + +++ +
Sbjct: 311 GRHVFITGGSSGIGLAMATAAAREGARVSILARNLARLEEARAAIHRDSGR 463
>gb|CW226668.1|CW226668 104_664_11205007_148_37220_020 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11205007, DNA
sequence
Length = 698
Score = 35.4 bits (71), Expect = 1.1
Identities = 15/30 (50%), Positives = 17/30 (56%)
Frame = -2 / +3
Query: 312 TVTNKPLLAKAIQSAFPMPEAPPVTSADMP 223
T T P A+ +A PMP APPVT A P
Sbjct: 294 TATRAPRDARCFDTAGPMPPAPPVTMATRP 383
>gb|CW266935.1|CW266935 104_736_11232704_148_35288_018 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11232704, DNA
sequence
Length = 588
Score = 35.4 bits (71), Expect = 1.1
Identities = 17/43 (39%), Positives = 22/43 (51%)
Frame = +2 / +3
Query: 233 ALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVATLVQ 361
ALVTGG GIG C A +GL V + +E G E ++
Sbjct: 354 ALVTGGNKGIGLETCRQLASKGLRVVLTARNEARGLEAVERIR 482
>gb|CW287973.1|CW287973 104_766_11411702_116_37443_059 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11411702, DNA
sequence
Length = 589
Score = 35.4 bits (71), Expect = 1.1
Identities = 16/35 (45%), Positives = 21/35 (60%)
Frame = +2 / +2
Query: 653 VIINIGSAAGLYPMFLDPVYSAAKGGVVMFTRSLS 757
V++N+ S AGL VYSA GG+ TRSL+
Sbjct: 440 VVVNVSSIAGLVAYPALAVYSATNGGLNQLTRSLA 544
>gb|CW412101.1|CW412101 fsbb001f107j09f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f107j09, DNA
sequence
Length = 746
Score = 35.4 bits (71), Expect = 1.1
Identities = 17/43 (39%), Positives = 22/43 (51%)
Frame = +2 / +1
Query: 233 ALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVATLVQ 361
ALVTGG GIG C A +GL V + +E G E ++
Sbjct: 205 ALVTGGNKGIGLETCRQLASKGLRVVLTARNEARGLEAVERIR 333
>gb|BE362791.1|BE362791 DG1_89_G03.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 532
Score = 35.4 bits (71), Expect = 1.1
Identities = 15/30 (50%), Positives = 17/30 (56%)
Frame = -2 / -1
Query: 312 TVTNKPLLAKAIQSAFPMPEAPPVTSADMP 223
T T P A+ +A PMP APPVT A P
Sbjct: 121 TTTRAPSDARCFDTAEPMPPAPPVTMATRP 32
>gb|BE367547.1|BE367547 PI1_9_A01.b1_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 502
Score = 35.4 bits (71), Expect = 1.1
Identities = 17/40 (42%), Positives = 21/40 (52%)
Frame = +2 / +1
Query: 200 AGEMELKPGMSALVTGGASGIGKALCIAFARRGLFVTVVD 319
A + + G AL+TG ASGIG A F R G V + D
Sbjct: 376 ADDSQRLAGKVALITGAASGIGAATAREFVRAGAKVVLAD 495
>gb|BE919277.1|BE919277 FM1_4_D08.b1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 339
Score = 35.4 bits (71), Expect = 1.1
Identities = 17/43 (39%), Positives = 22/43 (51%)
Frame = +2 / +1
Query: 233 ALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVATLVQ 361
ALVTGG GIG C A +GL V + +E G E ++
Sbjct: 79 ALVTGGNKGIGLETCRQLASKGLRVVLTARNEARGLEAVERIR 207
>gb|BG558220.1|BG558220 RHIZ2_64_E11.b1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 406
Score = 35.4 bits (71), Expect = 1.1
Identities = 15/30 (50%), Positives = 17/30 (56%)
Frame = -2 / -3
Query: 312 TVTNKPLLAKAIQSAFPMPEAPPVTSADMP 223
T T P A+ +A PMP APPVT A P
Sbjct: 188 TTTRAPSDARCFDTAEPMPPAPPVTMATRP 99
>gb|BG558257.1|BG558257 RHIZ2_64_H03.b1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 351
Score = 35.4 bits (71), Expect = 1.1
Identities = 15/30 (50%), Positives = 17/30 (56%)
Frame = -2 / -3
Query: 312 TVTNKPLLAKAIQSAFPMPEAPPVTSADMP 223
T T P A+ +A PMP APPVT A P
Sbjct: 184 TTTRAPSDARCFDTAEPMPPAPPVTMATRP 95
>gb|BG560483.1|BG560483 RHIZ2_74_H12.b1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 493
Score = 35.4 bits (71), Expect = 1.1
Identities = 15/30 (50%), Positives = 17/30 (56%)
Frame = -2 / -2
Query: 312 TVTNKPLLAKAIQSAFPMPEAPPVTSADMP 223
T T P A+ +A PMP APPVT A P
Sbjct: 189 TTTRAPSDARCFDTAEPMPPAPPVTMATRP 100
>gb|CB925393.1|CB925393 ABA1_32_E01.g1_A012 Abscisic acid-treated seedlings Sorghum bicolor
cDNA clone ABA1_32_E01_A012 5', mRNA sequence
Length = 535
Score = 35.4 bits (71), Expect = 1.1
Identities = 16/44 (36%), Positives = 22/44 (50%)
Frame = -2 / -2
Query: 354 NVATSLPFSSEKSTTVTNKPLLAKAIQSAFPMPEAPPVTSADMP 223
+ AT+ FS + T + P A+ A PMP PVT+A P
Sbjct: 366 SAATAASFSGLRPTRTSPSPAAARRKAMARPMPSVAPVTTAQAP 235
Score = 34.5 bits (69), Expect = 2.1
Identities = 17/51 (33%), Positives = 27/51 (52%)
Frame = +2 / +2
Query: 224 GMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVATLVQKENSK 376
G A+VTG GIG+A+ A GL + +V + E VA ++ ++ K
Sbjct: 236 GAWAVVTGATDGIGRAIAFRLAAAGLGLVLVGRNPEKLAAVAAEIKAKHPK 388
>gb|CD205082.1|CD205082 HS1_11_A02.g1_A012 Heat-shocked seedlings Sorghum bicolor cDNA
clone HS1_11_A02_A012 5', mRNA sequence
Length = 520
Score = 35.4 bits (71), Expect = 1.1
Identities = 16/44 (36%), Positives = 22/44 (50%)
Frame = -2 / -1
Query: 354 NVATSLPFSSEKSTTVTNKPLLAKAIQSAFPMPEAPPVTSADMP 223
+ AT+ FS + T + P A+ A PMP PVT+A P
Sbjct: 352 SAATAASFSGLRPTRTSPSPAAARRKAMARPMPSVAPVTTAQAP 221
Score = 34.5 bits (69), Expect = 2.1
Identities = 17/51 (33%), Positives = 27/51 (52%)
Frame = +2 / +3
Query: 224 GMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVATLVQKENSK 376
G A+VTG GIG+A+ A GL + +V + E VA ++ ++ K
Sbjct: 222 GAWAVVTGATDGIGRAIAFRLAAAGLGLVLVGRNPEKLAAVAAEIKAKHPK 374
>gb|CD212664.1|CD212664 HS1_6_B06.g1_A012 Heat-shocked seedlings Sorghum bicolor cDNA clone
HS1_6_B06_A012 5', mRNA sequence
Length = 627
Score = 35.4 bits (71), Expect = 1.1
Identities = 16/44 (36%), Positives = 22/44 (50%)
Frame = -2 / -1
Query: 354 NVATSLPFSSEKSTTVTNKPLLAKAIQSAFPMPEAPPVTSADMP 223
+ AT+ FS + T + P A+ A PMP PVT+A P
Sbjct: 366 SAATAASFSGLRPTRTSPSPAAARRKAMARPMPSVAPVTTAQAP 235
Score = 34.5 bits (69), Expect = 2.1
Identities = 17/51 (33%), Positives = 27/51 (52%)
Frame = +2 / +2
Query: 224 GMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVATLVQKENSK 376
G A+VTG GIG+A+ A GL + +V + E VA ++ ++ K
Sbjct: 236 GAWAVVTGATDGIGRAIAFRLAAAGLGLVLVGRNPEKLAAVAAEIKAKHPK 388
>gb|CD213868.1|CD213868 HS1_53_E05.g1_A012 Heat-shocked seedlings Sorghum bicolor cDNA
clone HS1_53_E05_A012 5', mRNA sequence
Length = 608
Score = 35.4 bits (71), Expect = 1.1
Identities = 16/44 (36%), Positives = 22/44 (50%)
Frame = -2 / -3
Query: 354 NVATSLPFSSEKSTTVTNKPLLAKAIQSAFPMPEAPPVTSADMP 223
+ AT+ FS + T + P A+ A PMP PVT+A P
Sbjct: 366 SAATAASFSGLRPTRTSPSPAAARRKAMARPMPSVAPVTTAQAP 235
Score = 34.5 bits (69), Expect = 2.1
Identities = 17/51 (33%), Positives = 27/51 (52%)
Frame = +2 / +2
Query: 224 GMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVATLVQKENSK 376
G A+VTG GIG+A+ A GL + +V + E VA ++ ++ K
Sbjct: 236 GAWAVVTGATDGIGRAIAFRLAAAGLGLVLVGRNPEKLAAVAAEIKAKHPK 388
>gb|CD227489.1|CD227489 CCC1_51_C10.g1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_51_C10_A007 5', mRNA sequence
Length = 648
Score = 35.4 bits (71), Expect = 1.1
Identities = 16/44 (36%), Positives = 22/44 (50%)
Frame = -2 / -3
Query: 354 NVATSLPFSSEKSTTVTNKPLLAKAIQSAFPMPEAPPVTSADMP 223
+ AT+ FS + T + P A+ A PMP PVT+A P
Sbjct: 379 SAATAASFSGLRPTRTSPSPAAARRKAMARPMPSVAPVTTAQAP 248
Score = 34.5 bits (69), Expect = 2.1
Identities = 17/51 (33%), Positives = 27/51 (52%)
Frame = +2 / +3
Query: 224 GMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVATLVQKENSK 376
G A+VTG GIG+A+ A GL + +V + E VA ++ ++ K
Sbjct: 249 GAWAVVTGATDGIGRAIAFRLAAAGLGLVLVGRNPEKLAAVAAEIKAKHPK 401
>gb|CD234899.1|CD234899 SS1_18_E03.g1_A012 Salt-stressed seedlings Sorghum bicolor cDNA
clone SS1_18_E03_A012 5', mRNA sequence
Length = 557
Score = 35.4 bits (71), Expect = 1.1
Identities = 15/30 (50%), Positives = 17/30 (56%)
Frame = -2 / -1
Query: 312 TVTNKPLLAKAIQSAFPMPEAPPVTSADMP 223
T T P A+ +A PMP APPVT A P
Sbjct: 233 TATRAPRDARCFDTAEPMPPAPPVTMATRP 144
>gb|CD234974.1|CD234974 SS1_19_H12.g1_A012 Salt-stressed seedlings Sorghum bicolor cDNA
clone SS1_19_H12_A012 5', mRNA sequence
Length = 647
Score = 35.4 bits (71), Expect = 1.1
Identities = 16/44 (36%), Positives = 22/44 (50%)
Frame = -2 / -3
Query: 354 NVATSLPFSSEKSTTVTNKPLLAKAIQSAFPMPEAPPVTSADMP 223
+ AT+ FS + T + P A+ A PMP PVT+A P
Sbjct: 372 SAATAASFSGLRPTRTSPSPAAARRKAMARPMPSVAPVTTAQAP 241
Score = 34.5 bits (69), Expect = 2.1
Identities = 17/51 (33%), Positives = 27/51 (52%)
Frame = +2 / +2
Query: 224 GMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVATLVQKENSK 376
G A+VTG GIG+A+ A GL + +V + E VA ++ ++ K
Sbjct: 242 GAWAVVTGATDGIGRAIAFRLAAAGLGLVLVGRNPEKLAAVAAEIKAKHPK 394
>gb|CD430360.1|CD430360 ETH1_18_D02.g1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_18_D02_A002 5', mRNA sequence
Length = 552
Score = 35.4 bits (71), Expect = 1.1
Identities = 16/44 (36%), Positives = 22/44 (50%)
Frame = -2 / -3
Query: 354 NVATSLPFSSEKSTTVTNKPLLAKAIQSAFPMPEAPPVTSADMP 223
+ AT+ FS + T + P A+ A PMP PVT+A P
Sbjct: 367 SAATAASFSGLRPTRTSPSPAAARRKAMARPMPSVAPVTTAQAP 236
Score = 34.5 bits (69), Expect = 2.1
Identities = 17/51 (33%), Positives = 27/51 (52%)
Frame = +2 / +3
Query: 224 GMSALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVATLVQKENSK 376
G A+VTG GIG+A+ A GL + +V + E VA ++ ++ K
Sbjct: 237 GAWAVVTGATDGIGRAIAFRLAAAGLGLVLVGRNPEKLAAVAAEIKAKHPK 389
>gb|CN125491.1|CN125491 RHOH1_11_A01.g1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_11_A01_A002 5', mRNA sequence
Length = 645
Score = 35.4 bits (71), Expect = 1.1
Identities = 15/30 (50%), Positives = 17/30 (56%)
Frame = -2 / -3
Query: 312 TVTNKPLLAKAIQSAFPMPEAPPVTSADMP 223
T T P A+ +A PMP APPVT A P
Sbjct: 178 TTTRAPSDARCFDTAEPMPPAPPVTMATRP 89
>gb|CN136094.1|CN136094 OX1_40_F06.g1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_40_F06_A002 5', mRNA sequence
Length = 287
Score = 35.4 bits (71), Expect = 1.1
Identities = 15/39 (38%), Positives = 23/39 (58%)
Frame = -2 / -3
Query: 348 ATSLPFSSEKSTTVTNKPLLAKAIQSAFPMPEAPPVTSA 232
A + P S ++ + T +P A+ SA+PMP PVT+A
Sbjct: 282 AAASPRSPSRAVSTTVRPCSARRAASAWPMPRFAPVTTA 166
>gb|CX621659.1|CX621659 GABR1_59_A03.g1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_59_A03_A002 5', mRNA sequence
Length = 361
Score = 35.4 bits (71), Expect = 1.1
Identities = 16/44 (36%), Positives = 22/44 (50%)
Frame = -2 / -2
Query: 354 NVATSLPFSSEKSTTVTNKPLLAKAIQSAFPMPEAPPVTSADMP 223
+ AT+ FS + T + P A+ A PMP PVT+A P
Sbjct: 357 SAATAASFSGLRPTRTSPSPAAARRKAMARPMPSVAPVTTAQAP 226
>gb|CW068608.1|CW068608 104_317_10525211_1_30096 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10525211, DNA
sequence
Length = 680
Score = 35.0 bits (70), Expect = 1.5
Identities = 15/34 (44%), Positives = 18/34 (52%)
Frame = -2 / -1
Query: 312 TVTNKPLLAKAIQSAFPMPEAPPVTSADMPGLSS 211
T T P A+ + +A PMP PPVT A P S
Sbjct: 674 TTTRAPSDARCVATAEPMPPEPPVTMATRPARGS 573
>gb|CW268782.1|CW268782 104_739_11401517_116_35308_019 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11401517, DNA
sequence
Length = 603
Score = 35.0 bits (70), Expect = 1.5
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = +2 / +1
Query: 224 GMSALVTGGASGIGKALCIAFARRGLFVTVV 316
G +TGG+SGIG A+ A AR G V+++
Sbjct: 448 GRHVFITGGSSGIGLAMATAAAREGARVSIL 540
>gb|CW436910.1|CW436910 fsbb001f153m09k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f153m09, DNA
sequence
Length = 517
Score = 35.0 bits (70), Expect = 1.5
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = +2 / +3
Query: 224 GMSALVTGGASGIGKALCIAFARRGLFVTVV 316
G +TGG+SGIG A+ A AR G V+++
Sbjct: 327 GRHVFITGGSSGIGLAMATAAAREGARVSIL 419
>gb|AW287290.2|AW287290 LG1_269_A10.b1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 395
Score = 35.0 bits (70), Expect = 1.5
Identities = 15/30 (50%), Positives = 18/30 (60%)
Frame = +2 / +2
Query: 224 GMSALVTGGASGIGKALCIAFARRGLFVTV 313
G A+VTG GIGK + + ARRG V V
Sbjct: 131 GKVAVVTGSGRGIGKEMALELARRGASVAV 220
>gb|AW287348.2|AW287348 LG1_269_G09.b1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 440
Score = 35.0 bits (70), Expect = 1.5
Identities = 15/30 (50%), Positives = 18/30 (60%)
Frame = +2 / +2
Query: 224 GMSALVTGGASGIGKALCIAFARRGLFVTV 313
G A+VTG GIGK + + ARRG V V
Sbjct: 131 GKVAVVTGSGRGIGKEMALELARRGASVAV 220
>gb|CL160918.1|CL160918 104_352_10805342_114_31826_014 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10805342, DNA
sequence
Length = 744
Score = 34.5 bits (69), Expect = 2.1
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = +2 / +3
Query: 233 ALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGRE 343
A+VTGG GIG +C A +G+ V + E+ G E
Sbjct: 357 AVVTGGNRGIGLEICRQLASKGVTVVLTARDEKRGAE 467
>gb|CL164245.1|CL164245 104_358_10807772_114_31814_140 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10807772, DNA
sequence
Length = 747
Score = 34.5 bits (69), Expect = 2.1
Identities = 17/37 (45%), Positives = 20/37 (54%)
Frame = +2 / +3
Query: 233 ALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGRE 343
ALVTGG G+G +C A GL V + SE G E
Sbjct: 294 ALVTGGNRGMGFEICRQLASGGLTVVLTARSETRGAE 404
>gb|CL164246.1|CL164246 104_358_10807772_116_31815_140 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10807772, DNA
sequence
Length = 668
Score = 34.5 bits (69), Expect = 2.1
Identities = 17/37 (45%), Positives = 20/37 (54%)
Frame = +2 / -1
Query: 233 ALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGRE 343
ALVTGG G+G +C A GL V + SE G E
Sbjct: 539 ALVTGGNRGMGFEICRQLASGGLTVVLTARSETRGAE 429
>gb|CW097503.1|CW097503 104_463_11002490_116_34347_005 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11002490, DNA
sequence
Length = 595
Score = 34.5 bits (69), Expect = 2.1
Identities = 17/37 (45%), Positives = 20/37 (54%)
Frame = +2 / -2
Query: 233 ALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGRE 343
ALVTGG G+G +C A GL V + SE G E
Sbjct: 522 ALVTGGNRGMGFEICRQLASGGLTVVLTARSETRGAE 412
>gb|CW199673.1|CW199673 104_624_11183637_148_36850_081 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11183637, DNA
sequence
Length = 740
Score = 34.5 bits (69), Expect = 2.1
Identities = 15/30 (50%), Positives = 19/30 (63%)
Frame = +2 / +2
Query: 224 GMSALVTGGASGIGKALCIAFARRGLFVTV 313
G ALVTGGA+GIG+A+ F G V +
Sbjct: 647 GKVALVTGGATGIGEAIVRLFTEHGAKVCI 736
>gb|CW233559.1|CW233559 104_686_11213502_148_37375_017 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11213502, DNA
sequence
Length = 596
Score = 34.5 bits (69), Expect = 2.1
Identities = 17/33 (51%), Positives = 19/33 (57%)
Frame = +1 / -1
Query: 76 SPLRPRQFRVPAGASSRFASRTSRLRRCDSSAA 174
SP R+ R PAG SSR RT R RRC +A
Sbjct: 353 SPDAGRRARPPAGCSSRTRQRTRRPRRCTRFSA 255
>gb|CW272140.1|CW272140 104_744_11403312_148_36227_090 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11403312, DNA
sequence
Length = 683
Score = 34.5 bits (69), Expect = 2.1
Identities = 17/37 (45%), Positives = 20/37 (54%)
Frame = +2 / +2
Query: 233 ALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGRE 343
ALVTGG G+G +C A GL V + SE G E
Sbjct: 149 ALVTGGNRGMGFEICRQLASGGLTVVLTARSETRGAE 259
>gb|CW274357.1|CW274357 104_747_11404384_148_35371_060 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11404384, DNA
sequence
Length = 723
Score = 34.5 bits (69), Expect = 2.1
Identities = 17/37 (45%), Positives = 20/37 (54%)
Frame = +2 / +1
Query: 233 ALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGRE 343
ALVTGG G+G +C A GL V + SE G E
Sbjct: 205 ALVTGGNRGMGFEICRQLASGGLTVVLTARSETRGAE 315
>gb|CW285131.1|CW285131 104_762_11410170_148_35500_075 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11410170, DNA
sequence
Length = 697
Score = 34.5 bits (69), Expect = 2.1
Identities = 17/33 (51%), Positives = 19/33 (57%)
Frame = +1 / +3
Query: 76 SPLRPRQFRVPAGASSRFASRTSRLRRCDSSAA 174
SP R+ R PAG SSR RT R RRC +A
Sbjct: 162 SPDAGRRARPPAGCSSRTRQRTRRPRRCTRFSA 260
>gb|CW398112.1|CW398112 fsbb001f087g18f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f087g18, DNA
sequence
Length = 689
Score = 34.5 bits (69), Expect = 2.1
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = +2 / +2
Query: 233 ALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGRE 343
A+VTGG GIG +C A +G+ V + E+ G E
Sbjct: 209 AVVTGGNRGIGLEICRQLASKGVTVVLTARDEKRGAE 319
>gb|CW408089.1|CW408089 fsbb001f101n08k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f101n08, DNA
sequence
Length = 790
Score = 34.5 bits (69), Expect = 2.1
Identities = 17/37 (45%), Positives = 20/37 (54%)
Frame = +2 / -3
Query: 233 ALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGRE 343
ALVTGG G+G +C A GL V + SE G E
Sbjct: 647 ALVTGGNRGMGFEICRQLASGGLTVVLTARSETRGAE 537
>gb|CW485827.1|CW485827 fsbb001f248m05f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f248m05, DNA
sequence
Length = 637
Score = 34.5 bits (69), Expect = 2.1
Identities = 19/42 (45%), Positives = 26/42 (61%)
Frame = +1 / -2
Query: 43 TGAESSVASSPSPLRPRQFRVPAGASSRFASRTSRLRRCDSS 168
T + S +SSPSPL R+PAGA S+ +RT R+C +S
Sbjct: 357 TTSLSLSSSSPSPLMWILRRLPAGAGSKGHNRTWTERQCRNS 232
>gb|AW744906.1|AW744906 LG1_384_G03.b1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 526
Score = 34.5 bits (69), Expect = 2.1
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = +2 / +3
Query: 233 ALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGRE 343
A+VTGG GIG +C A +G+ V + E+ G E
Sbjct: 9 AVVTGGNRGIGLEICRQLASKGVTVVLTARDEKRGAE 119
>gb|AW923109.1|AW923109 DG1_49_D11.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 436
Score = 34.5 bits (69), Expect = 2.1
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = +2 / +1
Query: 233 ALVTGGASGIGKALCIAFARRGLFVTVVDFSEENGREVAT 352
A+VTGG GIG +C A G+ V + E+ G E +
Sbjct: 301 AVVTGGNRGIGLEICKQLASNGITVVLTARDEKRGAEAVS 420
Database: Sorghum_nucl_with_EST.fasta
Posted date: May 2, 2006 3:37 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 847,228,981
Number of Sequences: 832831
Number of extensions: 11295217
Number of successful extensions: 98676
Number of sequences better than 10.0: 334
length of database: 163,786,556
effective HSP length: 54
effective length of database: 118,813,682
effective search space used: 25426127948
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)