TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= QAW3a11.yg.2.1
(969 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CF487333.1|CF487333 POL1_43_D11.b1_A002 Pollen Sorghum b... 366 e-124
gb|CW144377.1|CW144377 104_536_11137911_148_34962_056 Sorgh... 245 e-103
gb|CN140420.1|CN140420 OX1_36_B10.b1_A002 Oxidatively-stres... 303 4e-081
gb|CN149194.1|CN149194 WOUND1_61_F10.b1_A002 Wounded leaves... 298 7e-080
gb|BF585676.1|BF585676 FM1_24_C05.g1_A003 Floral-Induced Me... 150 2e-072
gb|BG101797.1|BG101797 RHIZ2_22_E09.g1_A003 Rhizome2 (RHIZ2... 272 7e-072
gb|CN127460.1|CN127460 RHOH1_23_D06.b1_A002 Acid- and alkal... 247 3e-064
gb|CX612893.1|CX612893 GABR1_5_C04.b1_A002 GA- or brassinol... 240 3e-062
gb|CF070980.1|CF070980 FE1_14_F12.g1_A002 Iron-deficient se... 232 7e-060
gb|CF757149.1|CF757149 DSAF1_14_D03.g1_A011 Drought-stresse... 91 9e-060
gb|CW285991.1|CW285991 104_763_11410641_116_35511_039 Sorgh... 220 4e-056
gb|BF587532.1|BF587532 FM1_37_E11.g1_A003 Floral-Induced Me... 210 3e-053
gb|BI139893.1|BI139893 IP1_47_A12.b1_A002 Immature pannicle... 126 1e-051
gb|CD234655.1|CD234655 SS1_17_C07.b1_A012 Salt-stressed see... 196 5e-049
gb|CW306008.1|CW306008 104_791_11466607_148_36273_024 Sorgh... 118 2e-048
gb|CL193723.1|CL193723 104_417_10941134_116_32279_053 Sorgh... 151 2e-047
gb|BM331533.1|BM331533 PIC1_72_D10.g1_A002 Pathogen-infecte... 187 2e-046
gb|CW285992.1|CW285992 104_763_11410641_148_35507_039 Sorgh... 178 1e-043
gb|BM329584.1|BM329584 PIC1_40_E09.g1_A002 Pathogen-infecte... 172 8e-042
gb|CW144376.1|CW144376 104_536_11137911_116_34966_056 Sorgh... 90 1e-037
gb|CW031244.1|CW031244 104_259_10500694_114_30397 Sorghum m... 155 1e-036
gb|CF480371.1|CF480371 POL1_65_H05.b1_A002 Pollen Sorghum b... 153 5e-036
gb|BZ695088.1|BZ695088 SP__Ba0057N21.r SP__Ba Sorghum propi... 148 2e-034
gb|CW789437.1|CW789437 SP__Ba0057N21.r SP__Ba Sorghum propi... 146 6e-034
gb|CW381875.1|CW381875 fsbb001f063h19k0 Sorghum methylation... 136 6e-031
gb|CF482490.1|CF482490 POL1_7_F08.b1_A002 Pollen Sorghum bi... 120 3e-026
gb|CL158360.1|CL158360 104_347_10803488_114_31377_080 Sorgh... 118 1e-025
gb|CL158361.1|CL158361 104_347_10803488_116_31378_080 Sorgh... 118 1e-025
gb|CF769345.1|CF769345 DSBF1_1_C05.b1_A010 Drought-stressed... 117 3e-025
gb|BI212063.1|BI212063 IP1_61_B03.g1_A002 Immature pannicle... 87 2e-024
gb|CW158441.1|CW158441 104_564_11148823_148_36396_028 Sorgh... 113 4e-024
gb|CW229988.1|CW229988 104_671_11207609_148_37265_071 Sorgh... 113 4e-024
gb|AC169370.3| Sorghum bicolor clone SB_BBc0011I20, WORKING... 90 1e-023
gb|CW068742.1|CW068742 104_317_10525284_1_30096 Sorghum met... 110 4e-023
gb|CF770909.1|CF770909 DSBF1_11_D05.g1_A010 Drought-stresse... 109 6e-023
gb|CW354779.1|CW354779 fsbb001f019c05k0 Sorghum methylation... 109 8e-023
gb|CF769429.1|CF769429 DSBF1_1_C05.g1_A010 Drought-stressed... 109 8e-023
gb|CD210962.1|CD210962 HS1_58_B05.b1_A012 Heat-shocked seed... 87 3e-022
gb|CW267133.1|CW267133 104_737_11400535_116_35289_028 Sorgh... 105 8e-022
>gb|CF487333.1|CF487333 POL1_43_D11.b1_A002 Pollen Sorghum bicolor cDNA clone
POL1_43_D11_A002 3', mRNA sequence
Length = 661
Score = 366 bits (793), Expect(4) = e-124
Identities = 139/142 (97%), Positives = 141/142 (99%)
Frame = +1 / +2
Query: 169 NFSNPHIARNFDPNACGWAYGMNIFDLREWKKKDITGIYHKWQNMNEDRVLWKLGTLPPG 348
NFSNPHIARNFDPNACGWAYGMNIFDLREWKKKDITGIYHKWQN+NEDR LWKLGTLPPG
Sbjct: 2 NFSNPHIARNFDPNACGWAYGMNIFDLREWKKKDITGIYHKWQNLNEDRALWKLGTLPPG 181
Query: 349 LLTFYKLTHPLDKSWHVLGLGYNPSIDRSEIDNAAVVHYNGNMKPWLELAMTKYRPYWTK 528
LLTFYKLTHPLDKSWHVLGLGYNPSIDRSEID+AAVVHYNGNMKPWLELAMTKYRPYWTK
Sbjct: 182 LLTFYKLTHPLDKSWHVLGLGYNPSIDRSEIDSAAVVHYNGNMKPWLELAMTKYRPYWTK 361
Query: 529 YIKYDHPYIRGCNLSE*IVVLK 594
YIKYDHPYIRGCNLSE*IVVLK
Sbjct: 362 YIKYDHPYIRGCNLSE*IVVLK 427
Score = 333 bits (721), Expect(3) = e-109
Identities = 134/142 (94%), Positives = 135/142 (95%)
Frame = +3 / +1
Query: 168 *FFKSTHCSEL*SKCMWLGLWDEHL*SEGVEEERYYWDLPQMAKYE*RQGPLEAWDTSAW 347
*FFKSTHCSEL*SKCMWLGLWDEHL* EGVEEERYYWDLPQMAK E*RQ LEAWDTSAW
Sbjct: 1 *FFKSTHCSEL*SKCMWLGLWDEHL*FEGVEEERYYWDLPQMAKSE*RQSSLEAWDTSAW 180
Query: 348 PLDLL*VDAPTGQVMACSWIRIQPKH*PFRDRQCCCGSLQWEHEAMAGASNDQVPTILDQ 527
PLDLL VDAPTGQVMACSWIRIQPKH PFRDRQCCCGSLQWEHEAM GASNDQVPTILDQ
Sbjct: 181 PLDLLQVDAPTGQVMACSWIRIQPKHRPFRDRQCCCGSLQWEHEAMVGASNDQVPTILDQ 360
Query: 528 VYQV*SPLHPWMQLE*VDSRAE 593
VYQV*SPLHPW+QLE*VDSRAE
Sbjct: 361 VYQV*SPLHPWVQLE*VDSRAE 426
Score = 321 bits (696), Expect(4) = e-110
Identities = 136/140 (97%), Positives = 138/140 (98%)
Frame = -2 / -2
Query: 593 FSTTIYSLKLHPRM*G*SYLIYLVQYGRYLVIASSSHGFMFPL**TTAALSISERSMLGL 414
FSTTIYSLKLHPRM*G*SYLIYLVQYGRYLVIASS+HGFMFPL**TTAALSISERSMLGL
Sbjct: 426 FSTTIYSLKLHPRM*G*SYLIYLVQYGRYLVIASSNHGFMFPL**TTAALSISERSMLGL 247
Query: 413 YPNPRTCHDLSSGCVNL*KVKRPGGSVPSFQRTLSSFIFCHLW*IPVISFFFHSLRSKMF 234
YPNPRTCHDLSSGCVNL*KVKRPGGSVPSFQR LSSF FCHLW*IPVISFFFHSL+SKMF
Sbjct: 246 YPNPRTCHDLSSGCVNL*KVKRPGGSVPSFQRALSSFRFCHLW*IPVISFFFHSLKSKMF 67
Query: 233 IP*AQPHAFGSKFRAMCGFE 174
IP*AQPHAFGSKFRAMCGFE
Sbjct: 66 IP*AQPHAFGSKFRAMCGFE 7
Score = 320 bits (694), Expect(3) = 1e-099
Identities = 128/136 (94%), Positives = 129/136 (94%)
Frame = -3 / -3
Query: 577 THSSCIHGCKGDHT*YTWSNMVGTWSLLAPAMASCSHCNEPQQHCLSLNGQCLGCILIQE 398
THSSC HGCKGDHT*YTWSNMVGTWSLLAP MASCSHCNEPQQHCLSLNG CLGCILIQE
Sbjct: 410 THSSCTHGCKGDHT*YTWSNMVGTWSLLAPTMASCSHCNEPQQHCLSLNGLCLGCILIQE 231
Query: 397 HAMTCPVGASTYRRSRGQAEVSQASKGPCLHSYFAICGRSQ*YLSSSTPSDQRCSSHKPS 218
HAMTCPVGAST RRSRGQAEVSQASK CLHS FAICGRSQ*YLSSSTPS+QRCSSHKPS
Sbjct: 230 HAMTCPVGASTCRRSRGQAEVSQASKELCLHSDFAICGRSQ*YLSSSTPSNQRCSSHKPS 51
Query: 217 HMHLDQSSEQCVDLKN 170
HMHLDQSSEQCVDLKN
Sbjct: 50 HMHLDQSSEQCVDLKN 3
Score = 311 bits (674), Expect(2) = 2e-092
Identities = 129/136 (94%), Positives = 130/136 (95%)
Frame = -1 / -1
Query: 594 FQHDYLLTQVASTDVRVIILDILGPIWSVLGHC*LQPWLHVPIVMNHSSIVYL*TVNAWV 415
FQHDYLLTQVA TDVRVIILDILGPIWSVLGHC*LQPWLHVPIVMNHSS VYL*TV AWV
Sbjct: 427 FQHDYLLTQVAPTDVRVIILDILGPIWSVLGHC*LQPWLHVPIVMNHSSTVYL*TVYAWV 248
Query: 414 VS*SKNMP*LVQWVRQLIEGQEARRKCPKLPKDPVFIHILPFVVDPSNIFLLPLPQIKDV 235
VS*SKNMP*LVQWVRQL+EGQEARRKCPKLPK VFI ILPFVVDPSNIFLLPLPQIKDV
Sbjct: 247 VS*SKNMP*LVQWVRQLVEGQEARRKCPKLPKSSVFIQILPFVVDPSNIFLLPLPQIKDV 68
Query: 234 HPISPATCIWIKVPSN 187
HPISPATCIWIKVPSN
Sbjct: 67 HPISPATCIWIKVPSN 20
Score = 294 bits (637), Expect(2) = 8e-088
Identities = 135/141 (95%), Positives = 136/141 (96%)
Frame = +2 / +3
Query: 170 IFQIHTLLGTLIQMHVAGLMG*TSLI*GSGRRKILLGSTTNGKI*MKTGSFGSLGHFRLA 349
IFQIHTLLGTLIQMHVAGLMG*TSLI*GSGRRKILLGSTTNGKI*MKT FGSLGHFRLA
Sbjct: 3 IFQIHTLLGTLIQMHVAGLMG*TSLI*GSGRRKILLGSTTNGKI*MKTELFGSLGHFRLA 182
Query: 350 S*PSIS*RTHWTSHGMFLD*DTTQALTVQR*TMLLWFITMGT*SHGWS*Q*PSTDHIGPS 529
S*PS S*RTHWTSHGMFLD*DTTQA TVQR*T+LLWFITMGT*SHGWS*Q*PSTDHIGPS
Sbjct: 183 S*PSTS*RTHWTSHGMFLD*DTTQA*TVQR*TVLLWFITMGT*SHGWS*Q*PSTDHIGPS 362
Query: 530 ISSMITLTSVDAT*VSR*SC* 592
ISSMITLTSV AT*VSR*SC*
Sbjct: 363 ISSMITLTSVGAT*VSR*SC* 425
Score = 87.7 bits (185), Expect(4) = e-124
Identities = 36/47 (76%), Positives = 37/47 (78%)
Frame = +1 / +3
Query: 595 N*QMRKSLLDRSVPLPCPCGALFDSAKWYYLKLLIAFLPSSPKKNSP 735
N*QMRKSLLDRSVPLPCPCGA FD+AKWYY KLLI FL P P
Sbjct: 426 N*QMRKSLLDRSVPLPCPCGAFFDTAKWYYRKLLIXFLLPLPSPLLP 566
Score = 82.2 bits (173), Expect(4) = e-110
Identities = 34/42 (80%), Positives = 35/42 (83%)
Frame = -2 / -1
Query: 719 GEEGRKAIKSLR*YHFAESNNAPQGHGSGTLLSNKLFLICQF 594
G RK IKS R*YHFA S NAPQGHGSGTLLSN+LFLICQF
Sbjct: 550 GRGRRKXIKSFR*YHFAVSKNAPQGHGSGTLLSNRLFLICQF 425
Score = 78.0 bits (164), Expect(3) = e-109
Identities = 32/39 (82%), Positives = 35/39 (89%)
Frame = +3 / +2
Query: 594 KLTDEEELIGQKCSTTMSLRCVIRLSKVVLPQALDCFPP 710
KLTDEEE +GQKCSTTMSLRCV+ SKVVLP+ALD FPP
Sbjct: 425 KLTDEEEPVGQKCSTTMSLRCVL*YSKVVLPEALDXFPP 541
Score = 60.6 bits (126), Expect(3) = 1e-099
Identities = 25/30 (83%), Positives = 26/30 (86%)
Frame = -3 / -2
Query: 709 GGKQSRA*GSTTLLSRITHRKDMVVEHFCP 620
GG QSRA GSTTLL + THRKDMVVEHFCP
Sbjct: 540 GGXQSRASGSTTLLYQRTHRKDMVVEHFCP 451
Score = 51.5 bits (106), Expect(2) = 8e-088
Identities = 20/22 (90%), Positives = 21/22 (95%)
Frame = +2 / +1
Query: 593 KTDR*GRAYWTEVFHYHVLAVR 658
+TDR*GRA WTEVFHYHVLAVR
Sbjct: 424 ETDR*GRACWTEVFHYHVLAVR 489
Score = 49.6 bits (102), Expect(2) = 2e-092
Identities = 20/21 (95%), Positives = 20/21 (95%)
Frame = -1 / -3
Query: 657 RTARTW*WNTSVQ*ALPHLSV 595
RTARTW*WNTSVQ ALPHLSV
Sbjct: 488 RTARTW*WNTSVQQALPHLSV 426
Score = 28.1 bits (55), Expect(4) = e-124
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +2 / +2
Query: 725 KIHRWLF*RVMYYYSDAFF 781
KIH W+F*RV +Y F+
Sbjct: 569 KIHWWMF*RVFFYSDVFFY 625
Score = 27.2 bits (53), Expect(3) = e-109
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = +3 / +3
Query: 726 KFTGGCSDE*CIIIAMRFFNSII 794
KFTGGCSDE I F ++
Sbjct: 570 KFTGGCSDEFFFIAMCFFIQLLV 638
Score = 27.2 bits (53), Expect(4) = e-110
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = -3 / -1
Query: 754 HSSEQPPVNFSWERRGGKQSR 692
+SSE PPVNF R G+ R
Sbjct: 598 NSSEHPPVNFQGRRGEGRGRR 536
Score = 27.2 bits (53), Expect(4) = e-110
Identities = 11/13 (84%), Positives = 13/13 (100%)
Frame = -2 / -1
Query: 815 KI*MHITNN*IKK 777
+I*+HITNN*IKK
Sbjct: 655 RI*LHITNN*IKK 617
Score = 24.0 bits (46), Expect(4) = e-124
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = +1 / +3
Query: 778 FLIQLLVICIYI 813
F IQLLV+C YI
Sbjct: 618 FFIQLLVMCSYI 653
Score = 23.5 bits (45), Expect(3) = 1e-099
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = -1 / -2
Query: 753 TRQNSHR*IFLGRGG 709
TRQN H+*IF G G
Sbjct: 597 TRQNIHQ*IFRGGEG 553
>gb|CW144377.1|CW144377 104_536_11137911_148_34962_056 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11137911, DNA
sequence
Length = 622
Score = 245 bits (529), Expect(3) = e-103
Identities = 95/97 (97%), Positives = 96/97 (98%)
Frame = +1 / +2
Query: 304 NEDRVLWKLGTLPPGLLTFYKLTHPLDKSWHVLGLGYNPSIDRSEIDNAAVVHYNGNMKP 483
NEDR LWKLGTLPPGLLTFYKLTHPLDKSWHVLGLGYNPSIDRSEID+AAVVHYNGNMKP
Sbjct: 278 NEDRALWKLGTLPPGLLTFYKLTHPLDKSWHVLGLGYNPSIDRSEIDSAAVVHYNGNMKP 457
Query: 484 WLELAMTKYRPYWTKYIKYDHPYIRGCNLSE*IVVLK 594
WLELAMTKYRPYWTKYIKYDHPYIRGCNLSE*IVVLK
Sbjct: 458 WLELAMTKYRPYWTKYIKYDHPYIRGCNLSE*IVVLK 568
Score = 226 bits (488), Expect(3) = 1e-092
Identities = 91/97 (93%), Positives = 92/97 (94%)
Frame = +3 / +1
Query: 303 E*RQGPLEAWDTSAWPLDLL*VDAPTGQVMACSWIRIQPKH*PFRDRQCCCGSLQWEHEA 482
E*RQ LEAWDTSAWPLDLL VDAPTGQVMACSWIRIQPKH PFRDRQCCCGSLQWEHEA
Sbjct: 277 E*RQSSLEAWDTSAWPLDLLQVDAPTGQVMACSWIRIQPKHRPFRDRQCCCGSLQWEHEA 456
Query: 483 MAGASNDQVPTILDQVYQV*SPLHPWMQLE*VDSRAE 593
M GASNDQVPTILDQVYQV*SPLHPW+QLE*VDSRAE
Sbjct: 457 MVGASNDQVPTILDQVYQV*SPLHPWVQLE*VDSRAE 567
Score = 220 bits (474), Expect(3) = 6e-088
Identities = 86/92 (93%), Positives = 86/92 (93%)
Frame = -3 / -3
Query: 577 THSSCIHGCKGDHT*YTWSNMVGTWSLLAPAMASCSHCNEPQQHCLSLNGQCLGCILIQE 398
THSSC HGCKGDHT*YTWSNMVGTWSLLAP MASCSHCNEPQQHCLSLNG CLGCILIQE
Sbjct: 551 THSSCTHGCKGDHT*YTWSNMVGTWSLLAPTMASCSHCNEPQQHCLSLNGLCLGCILIQE 372
Query: 397 HAMTCPVGASTYRRSRGQAEVSQASKGPCLHS 302
HAMTCPVGAST RRSRGQAEVSQASK CLHS
Sbjct: 371 HAMTCPVGASTCRRSRGQAEVSQASKELCLHS 276
Score = 220 bits (474), Expect(3) = 5e-090
Identities = 95/97 (97%), Positives = 96/97 (98%)
Frame = -2 / -2
Query: 593 FSTTIYSLKLHPRM*G*SYLIYLVQYGRYLVIASSSHGFMFPL**TTAALSISERSMLGL 414
FSTTIYSLKLHPRM*G*SYLIYLVQYGRYLVIASS+HGFMFPL**TTAALSISERSMLGL
Sbjct: 567 FSTTIYSLKLHPRM*G*SYLIYLVQYGRYLVIASSNHGFMFPL**TTAALSISERSMLGL 388
Query: 413 YPNPRTCHDLSSGCVNL*KVKRPGGSVPSFQRTLSSF 303
YPNPRTCHDLSSGCVNL*KVKRPGGSVPSFQR LSSF
Sbjct: 387 YPNPRTCHDLSSGCVNL*KVKRPGGSVPSFQRALSSF 277
Score = 217 bits (469), Expect(3) = 1e-080
Identities = 91/97 (93%), Positives = 92/97 (94%)
Frame = -1 / -1
Query: 594 FQHDYLLTQVASTDVRVIILDILGPIWSVLGHC*LQPWLHVPIVMNHSSIVYL*TVNAWV 415
FQHDYLLTQVA TDVRVIILDILGPIWSVLGHC*LQPWLHVPIVMNHSS VYL*TV AWV
Sbjct: 568 FQHDYLLTQVAPTDVRVIILDILGPIWSVLGHC*LQPWLHVPIVMNHSSTVYL*TVYAWV 389
Query: 414 VS*SKNMP*LVQWVRQLIEGQEARRKCPKLPKDPVFI 304
VS*SKNMP*LVQWVRQL+EGQEARRKCPKLPK VFI
Sbjct: 388 VS*SKNMP*LVQWVRQLVEGQEARRKCPKLPKSSVFI 278
Score = 198 bits (427), Expect(3) = 3e-080
Identities = 90/96 (93%), Positives = 91/96 (94%)
Frame = +2 / +3
Query: 305 MKTGSFGSLGHFRLAS*PSIS*RTHWTSHGMFLD*DTTQALTVQR*TMLLWFITMGT*SH 484
MKT FGSLGHFRLAS*PS S*RTHWTSHGMFLD*DTTQA TVQR*T+LLWFITMGT*SH
Sbjct: 279 MKTELFGSLGHFRLAS*PSTS*RTHWTSHGMFLD*DTTQA*TVQR*TVLLWFITMGT*SH 458
Query: 485 GWS*Q*PSTDHIGPSISSMITLTSVDAT*VSR*SC* 592
GWS*Q*PSTDHIGPSISSMITLTSV AT*VSR*SC*
Sbjct: 459 GWS*Q*PSTDHIGPSISSMITLTSVGAT*VSR*SC* 566
Score = 128 bits (275), Expect(3) = e-103
Identities = 46/47 (97%), Positives = 47/47 (100%)
Frame = +1 / +2
Query: 163 YLNFSNPHIARNFDPNACGWAYGMNIFDLREWKKKDITGIYHKWQNM 303
YLNFSNPHIARNFDPNACGWAYGMNIFDLREWKKKDITGIYHKWQN+
Sbjct: 2 YLNFSNPHIARNFDPNACGWAYGMNIFDLREWKKKDITGIYHKWQNL 142
Score = 113 bits (242), Expect(3) = 1e-092
Identities = 44/46 (95%), Positives = 45/46 (97%)
Frame = +3 / +1
Query: 162 IS*FFKSTHCSEL*SKCMWLGLWDEHL*SEGVEEERYYWDLPQMAK 299
+S*FFKSTHCSEL*SKCMWLGLWDEHL* EGVEEERYYWDLPQMAK
Sbjct: 1 VS*FFKSTHCSEL*SKCMWLGLWDEHL*FEGVEEERYYWDLPQMAK 138
Score = 108 bits (230), Expect(3) = 5e-090
Identities = 44/45 (97%), Positives = 45/45 (100%)
Frame = -3 / -3
Query: 298 FAICGRSQ*YLSSSTPSDQRCSSHKPSHMHLDQSSEQCVDLKN*D 164
FAICGRSQ*YLSSSTPS+QRCSSHKPSHMHLDQSSEQCVDLKN*D
Sbjct: 137 FAICGRSQ*YLSSSTPSNQRCSSHKPSHMHLDQSSEQCVDLKN*D 3
Score = 105 bits (225), Expect(3) = 6e-088
Identities = 41/42 (97%), Positives = 42/42 (100%)
Frame = -2 / -2
Query: 299 FCHLW*IPVISFFFHSLRSKMFIP*AQPHAFGSKFRAMCGFE 174
FCHLW*IPVISFFFHSL+SKMFIP*AQPHAFGSKFRAMCGFE
Sbjct: 138 FCHLW*IPVISFFFHSLKSKMFIP*AQPHAFGSKFRAMCGFE 13
Score = 102 bits (217), Expect(3) = 3e-080
Identities = 46/46 (100%), Positives = 46/46 (100%)
Frame = +2 / +3
Query: 164 ILIFQIHTLLGTLIQMHVAGLMG*TSLI*GSGRRKILLGSTTNGKI 301
ILIFQIHTLLGTLIQMHVAGLMG*TSLI*GSGRRKILLGSTTNGKI
Sbjct: 3 ILIFQIHTLLGTLIQMHVAGLMG*TSLI*GSGRRKILLGSTTNGKI 140
Score = 96.8 bits (205), Expect(3) = 1e-080
Identities = 38/38 (100%), Positives = 38/38 (100%)
Frame = -1 / -1
Query: 300 ILPFVVDPSNIFLLPLPQIKDVHPISPATCIWIKVPSN 187
ILPFVVDPSNIFLLPLPQIKDVHPISPATCIWIKVPSN
Sbjct: 139 ILPFVVDPSNIFLLPLPQIKDVHPISPATCIWIKVPSN 26
Score = 47.8 bits (98), Expect(3) = 5e-090
Identities = 18/19 (94%), Positives = 19/19 (100%)
Frame = -2 / -1
Query: 650 QGHGSGTLLSNKLFLICQF 594
QGHGSGTLLSN+LFLICQF
Sbjct: 622 QGHGSGTLLSNRLFLICQF 566
Score = 45.5 bits (93), Expect(3) = e-103
Identities = 17/19 (89%), Positives = 18/19 (94%)
Frame = +2 / +1
Query: 593 KTDR*GRAYWTEVFHYHVL 649
+TDR*GRA WTEVFHYHVL
Sbjct: 565 ETDR*GRACWTEVFHYHVL 621
Score = 45.1 bits (92), Expect(3) = 1e-092
Identities = 18/18 (100%), Positives = 18/18 (100%)
Frame = +1 / +3
Query: 595 N*QMRKSLLDRSVPLPCP 648
N*QMRKSLLDRSVPLPCP
Sbjct: 567 N*QMRKSLLDRSVPLPCP 620
Score = 43.2 bits (88), Expect(3) = 6e-088
Identities = 17/18 (94%), Positives = 17/18 (94%)
Frame = -1 / -3
Query: 648 RTW*WNTSVQ*ALPHLSV 595
RTW*WNTSVQ ALPHLSV
Sbjct: 620 RTW*WNTSVQQALPHLSV 567
Score = 42.8 bits (87), Expect(3) = 3e-080
Identities = 17/19 (89%), Positives = 18/19 (94%)
Frame = +3 / +2
Query: 594 KLTDEEELIGQKCSTTMSL 650
KLTDEEE +GQKCSTTMSL
Sbjct: 566 KLTDEEEPVGQKCSTTMSL 622
Score = 29.9 bits (59), Expect(3) = 1e-080
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = -3 / -2
Query: 649 KDMVVEHFCP 620
KDMVVEHFCP
Sbjct: 621 KDMVVEHFCP 592
>gb|CN140420.1|CN140420 OX1_36_B10.b1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_36_B10_A002 3', mRNA sequence
Length = 836
Score = 303 bits (655), Expect = 4e-081
Identities = 113/182 (62%), Positives = 134/182 (73%)
Frame = +1 / +3
Query: 1 FYLPXVYPKLXXXLFXXXDIVVXXDLTXXWDVDLNGKVNXXXXXCGXSFHRFDKYLNFSN 180
FYLP +YPKL LF D+VV DLT W +D++GKVN C SFHR+ +Y+NFS+
Sbjct: 75 FYLPEMYPKLHRILFLDDDVVVQRDLTGLWKIDMDGKVNGAVETCFGSFHRYAQYMNFSH 254
Query: 181 PHIARNFDPNACGWAYGMNIFDLREWKKKDITGIYHKWQNMNEDRVLWKLGTLPPGLLTF 360
P I F+PNACGWAYGMN FDL W+++ T YH WQN NE+R LWKLGTLPPGL+TF
Sbjct: 255 PLIKAKFNPNACGWAYGMNFFDLDSWRREKCTEQYHYWQNQNENRTLWKLGTLPPGLITF 434
Query: 361 YKLTHPLDKSWHVLGLGYNPSIDRSEIDNAAVVHYNGNMKPWLELAMTKYRPYWTKYIKY 540
Y T PL+KSWHVLGLGYNPSI EI NAAVVH+NGNMKPWL++ M ++R WTKY
Sbjct: 435 YSTTKPLEKSWHVLGLGYNPSISMEEIRNAAVVHFNGNMKPWLDIGMNQFRHLWTKYN*R 614
Query: 541 DH 546
DH
Sbjct: 615 DH 620
Score = 120 bits (256), Expect(2) = 4e-028
Identities = 63/123 (51%), Positives = 67/123 (54%)
Frame = -2 / -2
Query: 542 SYLIYLVQYGRYLVIASSSHGFMFPL**TTAALSISERSMLGLYPNPRTCHDLSSGCVNL 363
S +Y VQ I SS GFM PL TTAA IS MLGLYP+PRTC D S G V
Sbjct: 616 SLQLYFVQRCLNWFIPMSSQGFMLPLKCTTAAFLISSMLMLGLYPSPRTCQDFSRGFVVE 437
Query: 362 *KVKRPGGSVPSFQRTLSSFIFCHLW*IPVISFFFHSLRSKMFIP*AQPHAFGSKFRAMC 183
*KV +PGGSVPSF SF FC W V RSK FIP AQP A G F +
Sbjct: 436 *KVIKPGGSVPSFHNVRFSF*FCQ*WYCSVHFSLLQESRSKKFIPYAQPQALGLNFALIR 257
Query: 182 GFE 174
G E
Sbjct: 256 GCE 248
Score = 26.3 bits (51), Expect(2) = 4e-028
Identities = 14/37 (37%), Positives = 17/37 (45%)
Frame = -2 / -2
Query: 113 TFPLRSTSHXXVKSXXTTMSXXXKXXXSNFG*TXGR* 3
TFP S V+S TT S K +FG G+*
Sbjct: 187 TFPSMSIFQSPVRSLCTTTSSSRKRMRCSFGYISGK* 77
>gb|CN149194.1|CN149194 WOUND1_61_F10.b1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_61_F10_A002 3', mRNA sequence
Length = 807
Score = 298 bits (646), Expect = 7e-080
Identities = 109/178 (61%), Positives = 132/178 (74%)
Frame = +1 / +2
Query: 40 LFXXXDIVVXXDLTXXWDVDLNGKVNXXXXXCGXSFHRFDKYLNFSNPHIARNFDPNACG 219
LF D+VV DLT W +D++GKVN C SFHR+ +Y+NFS+P I F+PNACG
Sbjct: 11 LFLDDDVVVQRDLTGLWKIDMDGKVNGAVETCFGSFHRYAQYMNFSHPLIKAKFNPNACG 190
Query: 220 WAYGMNIFDLREWKKKDITGIYHKWQNMNEDRVLWKLGTLPPGLLTFYKLTHPLDKSWHV 399
WAYGMN FDL W+++ T YH WQN NE+R LWKLGTLPPGL+TFY T PL++SWHV
Sbjct: 191 WAYGMNFFDLDSWRREKCTEQYHYWQNQNENRTLWKLGTLPPGLITFYSTTKPLERSWHV 370
Query: 400 LGLGYNPSIDRSEIDNAAVVHYNGNMKPWLELAMTKYRPYWTKYIKYDHPYIRGCNLS 573
LGLGYNPSI EI NAAVVH+NGNMKPWL++ M ++R WTKY+ YD YIR CN +
Sbjct: 371 LGLGYNPSISMEEIRNAAVVHFNGNMKPWLDIGMNQFRHLWTKYVDYDDSYIRQCNFA 544
Score = 123 bits (263), Expect = 4e-027
Identities = 68/132 (51%), Positives = 72/132 (54%)
Frame = -2 / -1
Query: 569 KLHPRM*G*SYLIYLVQYGRYLVIASSSHGFMFPL**TTAALSISERSMLGLYPNPRTCH 390
KLH R+ S Y VQ I SS GFM PL TTAA IS MLGLYP+PRTC
Sbjct: 540 KLH*RIYESS*STYFVQRCLNWFIPMSSQGFMLPLKCTTAAFLISSMLMLGLYPSPRTCQ 361
Query: 389 DLSSGCVNL*KVKRPGGSVPSFQRTLSSFIFCHLW*IPVISFFFHSLRSKMFIP*AQPHA 210
DLS G V *KV +PGGSVPSF SF FC W V RSK FIP AQP A
Sbjct: 360 DLSRGFVVE*KVIKPGGSVPSFHNVRFSF*FCQ*WYCSVHFSLLQESRSKKFIPYAQPQA 181
Query: 209 FGSKFRAMCGFE 174
G F + G E
Sbjct: 180 LGLNFALIRGCE 145
>gb|BF585676.1|BF585676 FM1_24_C05.g1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 494
Score = 150 bits (322), Expect(4) = 2e-072
Identities = 58/60 (96%), Positives = 60/60 (100%)
Frame = +1 / +3
Query: 415 NPSIDRSEIDNAAVVHYNGNMKPWLELAMTKYRPYWTKYIKYDHPYIRGCNLSE*IVVLK 594
NPSIDRSE+D+AAVVHYNGNMKPWLELAMTKYRPYWTKYIKYDHPYIRGCNLSE*IVVLK
Sbjct: 3 NPSIDRSELDSAAVVHYNGNMKPWLELAMTKYRPYWTKYIKYDHPYIRGCNLSE*IVVLK 182
Score = 142 bits (305), Expect(5) = 6e-068
Identities = 51/55 (92%), Positives = 52/55 (94%)
Frame = -3 / -3
Query: 577 THSSCIHGCKGDHT*YTWSNMVGTWSLLAPAMASCSHCNEPQQHCLSLNGQCLGC 413
THSSC HGCKGDHT*YTWSNMVGTWSLLAP MASCSHCNEPQQHCL+LNG CLGC
Sbjct: 165 THSSCTHGCKGDHT*YTWSNMVGTWSLLAPTMASCSHCNEPQQHCLTLNGLCLGC 1
Score = 141 bits (302), Expect(4) = 8e-064
Identities = 56/60 (93%), Positives = 57/60 (95%)
Frame = +3 / +2
Query: 414 QPKH*PFRDRQCCCGSLQWEHEAMAGASNDQVPTILDQVYQV*SPLHPWMQLE*VDSRAE 593
QPKH PFR RQCCCGSLQWEHEAM GASNDQVPTILDQVYQV*SPLHPW+QLE*VDSRAE
Sbjct: 2 QPKHRPFRVRQCCCGSLQWEHEAMVGASNDQVPTILDQVYQV*SPLHPWVQLE*VDSRAE 181
Score = 133 bits (286), Expect(4) = 6e-052
Identities = 56/60 (93%), Positives = 56/60 (93%)
Frame = -1 / -1
Query: 594 FQHDYLLTQVASTDVRVIILDILGPIWSVLGHC*LQPWLHVPIVMNHSSIVYL*TVNAWV 415
FQHDYLLTQVA TDVRVIILDILGPIWSVLGHC*LQPWLHVPIVMNHSS V L*TV AWV
Sbjct: 182 FQHDYLLTQVAPTDVRVIILDILGPIWSVLGHC*LQPWLHVPIVMNHSSTV*L*TVYAWV 3
Score = 128 bits (274), Expect(3) = 6e-050
Identities = 58/60 (96%), Positives = 59/60 (98%)
Frame = -2 / -2
Query: 593 FSTTIYSLKLHPRM*G*SYLIYLVQYGRYLVIASSSHGFMFPL**TTAALSISERSMLGL 414
FSTTIYSLKLHPRM*G*SYLIYLVQYGRYLVIASS+HGFMFPL**TTAALS SERSMLGL
Sbjct: 181 FSTTIYSLKLHPRM*G*SYLIYLVQYGRYLVIASSNHGFMFPL**TTAALSNSERSMLGL 2
Score = 120 bits (257), Expect(4) = 1e-047
Identities = 56/60 (93%), Positives = 57/60 (95%)
Frame = +2 / +1
Query: 413 TTQALTVQR*TMLLWFITMGT*SHGWS*Q*PSTDHIGPSISSMITLTSVDAT*VSR*SC* 592
TTQA TVQ *T+LLWFITMGT*SHGWS*Q*PSTDHIGPSISSMITLTSV AT*VSR*SC*
Sbjct: 1 TTQA*TVQS*TVLLWFITMGT*SHGWS*Q*PSTDHIGPSISSMITLTSVGAT*VSR*SC* 180
Score = 95.5 bits (202), Expect(4) = 2e-072
Identities = 37/40 (92%), Positives = 39/40 (97%)
Frame = +1 / +1
Query: 595 N*QMRKSLLDRSVPLPCPCGALFDSAKWYYLKLLIAFLPS 714
N*QMRKSLLDRSVPLPCPCGA FD+AKWYY+KLLIAFLPS
Sbjct: 181 N*QMRKSLLDRSVPLPCPCGAFFDTAKWYYMKLLIAFLPS 300
Score = 85.4 bits (180), Expect(5) = 6e-068
Identities = 35/40 (87%), Positives = 36/40 (90%)
Frame = -2 / -1
Query: 713 EGRKAIKSLR*YHFAESNNAPQGHGSGTLLSNKLFLICQF 594
EGRKAIKS *YHFA S NAPQGHGSGTLLSN+LFLICQF
Sbjct: 299 EGRKAIKSFM*YHFAVSKNAPQGHGSGTLLSNRLFLICQF 180
Score = 81.3 bits (171), Expect(4) = 8e-064
Identities = 34/42 (80%), Positives = 37/42 (88%)
Frame = +3 / +3
Query: 594 KLTDEEELIGQKCSTTMSLRCVIRLSKVVLPQALDCFPPLLS 719
KLTDEEE +GQKCSTTMSLRCV+ SKVVL +ALDCFPPL S
Sbjct: 180 KLTDEEEPVGQKCSTTMSLRCVL*YSKVVLHEALDCFPPLPS 305
Score = 62.9 bits (131), Expect(4) = 6e-052
Identities = 27/33 (81%), Positives = 28/33 (84%)
Frame = -3 / -2
Query: 718 ERRGGKQSRA*GSTTLLSRITHRKDMVVEHFCP 620
E RGGKQSRA STTLL + THRKDMVVEHFCP
Sbjct: 304 EGRGGKQSRASCSTTLLYQRTHRKDMVVEHFCP 206
Score = 62.0 bits (129), Expect(3) = 6e-050
Identities = 28/41 (68%), Positives = 28/41 (68%)
Frame = -1 / -3
Query: 717 RGGEESNQXXXXXXXXXXX*RTARTW*WNTSVQ*ALPHLSV 595
RGGEESNQ RTARTW*WNTSVQ ALPHLSV
Sbjct: 303 RGGEESNQELHVVPLCCIKERTARTW*WNTSVQQALPHLSV 181
Score = 59.7 bits (124), Expect(4) = 2e-072
Identities = 26/41 (63%), Positives = 31/41 (75%)
Frame = +3 / +1
Query: 777 FFNSIISNMHLYFPSKLAGEKLIKWICGAGVACCLEVCLEN 899
FF SIISN+ LY K++ +KL+K AGVACCLEVCLEN
Sbjct: 364 FFYSIISNV*LYSAVKISRKKLLKCAYRAGVACCLEVCLEN 486
Score = 59.7 bits (124), Expect(5) = 6e-068
Identities = 29/43 (67%), Positives = 32/43 (74%)
Frame = -2 / -3
Query: 905 HSIL*AYL*ATRDTSPTNPFYKFFSC*F*RKI*MHITNN*IKK 777
HSIL* YL*A RDTSP + F KF F +I*+HITNN*IKK
Sbjct: 492 HSIL*TYL*AARDTSPISTF*KFLPANFDGRI*LHITNN*IKK 364
Score = 56.1 bits (116), Expect(4) = 8e-064
Identities = 26/43 (60%), Positives = 29/43 (67%)
Frame = +1 / +2
Query: 778 FLIQLLVICIYIFRQN*QEKNL*NGFVGLVSRVA*RYA*RIEC 906
F IQLLV+C YI +N *N +GLVSR A*RY *RIEC
Sbjct: 365 FFIQLLVMCSYILPSKLAGRNF*NVLIGLVSRAA*RYV*RIEC 493
Score = 51.9 bits (107), Expect(4) = 1e-047
Identities = 26/43 (60%), Positives = 29/43 (67%)
Frame = +2 / +3
Query: 779 F*FNY**YAFIFSVKISRRKTYKMDLWGWCRVLLRGMPRESSV 907
F FNY** IF + + +T KM L GWCRVLLRGM RE SV
Sbjct: 366 FLFNY**CVVIFCRQN*QEETSKMCLSGWCRVLLRGMSRELSV 494
Score = 51.5 bits (106), Expect(4) = 1e-047
Identities = 20/22 (90%), Positives = 21/22 (95%)
Frame = +2 / +2
Query: 593 KTDR*GRAYWTEVFHYHVLAVR 658
+TDR*GRA WTEVFHYHVLAVR
Sbjct: 179 ETDR*GRACWTEVFHYHVLAVR 244
Score = 47.8 bits (98), Expect(3) = 6e-050
Identities = 25/43 (58%), Positives = 29/43 (67%)
Frame = -1 / -2
Query: 906 TLDSLGIPLSNTRHQPHKSIL*VFLLLILTENINAYY**LN*K 778
TL+SL IPLS+TRHQP K IL V +NI +Y**LN K
Sbjct: 493 TLNSLDIPLSSTRHQPDKHILEVSSC*F*RQNITTHY**LNKK 365
Score = 46.9 bits (96), Expect(4) = 6e-052
Identities = 19/24 (79%), Positives = 20/24 (83%)
Frame = -3 / -1
Query: 907 NTRFSRHTSKQHATPAPQIHFISF 836
NT+FSRHTSKQHATPA HF SF
Sbjct: 494 NTQFSRHTSKQHATPAR*AHFRSF 423
Score = 27.6 bits (54), Expect(5) = 6e-068
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = -3 / -1
Query: 757 HHSSEQPPVNFSWERRGGKQS 695
++SSE PPVNF R G+++
Sbjct: 347 NNSSEHPPVNFQGRRGEGRKA 285
Score = 26.7 bits (52), Expect(4) = 2e-072
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +3 / +1
Query: 726 KFTGGCSDE 752
KFTGGCSDE
Sbjct: 316 KFTGGCSDE 342
Score = 24.4 bits (47), Expect(4) = 8e-064
Identities = 8/12 (66%), Positives = 11/12 (91%)
Frame = +2 / +3
Query: 725 KIHRWLF*RVMY 760
KIH W+F*RV++
Sbjct: 315 KIHWWMF*RVVF 350
Score = 24.0 bits (46), Expect(4) = 1e-047
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +1 / +2
Query: 694 LIAFLPSSPKKNSPVAVLTSDVLL*RCVFLIQLLV 798
L++ P S +NS V VLTS + C F+ L++
Sbjct: 284 LLSSPPLSSPENSLVDVLTSCFFIAMCFFIQLLVM 388
Score = 21.7 bits (41), Expect(5) = 6e-068
Identities = 7/10 (70%), Positives = 8/10 (80%)
Frame = -2 / -2
Query: 782 KKTHRYNNTS 753
KKTHRY T+
Sbjct: 370 KKTHRYKKTT 341
Score = 21.7 bits (41), Expect(4) = 6e-052
Identities = 13/25 (52%), Positives = 14/25 (56%)
Frame = -1 / -1
Query: 837 FLLLILTENINAYY**LN*KNASL* 763
F LLILT N + *KN SL*
Sbjct: 425 FFLLILTAEYNYTLLIIE*KNTSL* 351
>gb|BG101797.1|BG101797 RHIZ2_22_E09.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 591
Score = 272 bits (588), Expect = 7e-072
Identities = 99/113 (87%), Positives = 108/113 (95%)
Frame = +1 / +3
Query: 241 FDLREWKKKDITGIYHKWQNMNEDRVLWKLGTLPPGLLTFYKLTHPLDKSWHVLGLGYNP 420
FDL EWK KDITGIYHKWQNMNE+R+LWKLGTLPPGLLTFYKLTHPLDKSWHVLGLGYNP
Sbjct: 3 FDLEEWKNKDITGIYHKWQNMNENRLLWKLGTLPPGLLTFYKLTHPLDKSWHVLGLGYNP 182
Query: 421 SIDRSEIDNAAVVHYNGNMKPWLELAMTKYRPYWTKYIKYDHPYIRGCNLSE* 579
+I+RSEIDNAAV+HYNGNMKPWLE+AMTKYRPYWTKYI Y+HPYI GC +S+*
Sbjct: 183 TIERSEIDNAAVIHYNGNMKPWLEIAMTKYRPYWTKYINYEHPYIHGCKISQ* 341
Score = 188 bits (406), Expect = 8e-047
Identities = 83/112 (74%), Positives = 91/112 (81%)
Frame = -2 / -3
Query: 578 YSLKLHPRM*G*SYLIYLVQYGRYLVIASSSHGFMFPL**TTAALSISERSMLGLYPNPR 399
Y L LHP M G S L+Y VQ GRY VIA SSHGFM PL* TAALSISERSM+GLYP P
Sbjct: 340 YWLILHP*MYGCS*LMYFVQ*GRYFVIAISSHGFMLPL*WMTAALSISERSMVGLYPKPS 161
Query: 398 TCHDLSSGCVNL*KVKRPGGSVPSFQRTLSSFIFCHLW*IPVISFFFHSLRS 243
TCHDLS GCV+L*KV+ PGG+VPSFQ +L SF+FCHLW*IPV+S FFHS RS
Sbjct: 160 TCHDLSRGCVSL*KVRSPGGNVPSFQSSLFSFMFCHLW*IPVMSLFFHSSRS 5
Score = 147 bits (316), Expect = 2e-034
Identities = 61/114 (53%), Positives = 85/114 (74%)
Frame = -1 / -2
Query: 582 YLLTQVASTDVRVIILDILGPIWSVLGHC*LQPWLHVPIVMNHSSIVYL*TVNAWVVS*S 403
+LL +AS +VRV+I+D+L P+ +L HC QP LHV IV++ SIVY * +N W+V *+
Sbjct: 344 FLLADLASMNVRVLIIDVLCPVRPILCHCDFQPRLHVTIVVDDRSIVYF*ALNGWIVP*A 165
Query: 402 KNMP*LVQWVRQLIEGQEARRKCPKLPKDPVFIHILPFVVDPSNIFLLPLPQIK 241
K+MP* VQ V QL++ + R+CP+ P+ PV IH+LPFVV+PSN+F+LP QIK
Sbjct: 164 KHMP*FVQRVCQLVKS*KPWRQCPQFPEQPVLIHVLPFVVNPSNVFILPFFQIK 3
Score = 147 bits (315), Expect = 3e-034
Identities = 58/109 (53%), Positives = 80/109 (73%)
Frame = +3 / +2
Query: 240 L*SEGVEEERYYWDLPQMAKYE*RQGPLEAWDTSAWPLDLL*VDAPTGQVMACSWIRIQP 419
+*S +EE R+YWDLPQMA++E* Q LE D ++ + L D P+GQ+MAC+W+R+Q
Sbjct: 2 V*SGRMEE*RHYWDLPQMAEHE*EQAALETGDIASRASNFLQADTPSGQIMACAWLRVQS 181
Query: 420 KH*PFRDRQCCCGSLQWEHEAMAGASNDQVPTILDQVYQV*SPLHPWMQ 566
H* R+RQCC LQW HEA+AG ND+V +LD+V+Q+*+P+H WMQ
Sbjct: 182 NH*ALRNRQCCGHPLQW*HEAVAGNRNDKVSALLDKVHQL*APVHSWMQ 328
Score = 116 bits (249), Expect = 4e-025
Identities = 54/109 (49%), Positives = 62/109 (56%)
Frame = -3 / -1
Query: 568 SCIHGCKGDHT*YTWSNMVGTWSLLAPAMASCSHCNEPQQHCLSLNGQCLGCILIQEHAM 389
SCIH C G H * T S+ T SL PA ASC HC+ QHCL L+ Q L C L Q HAM
Sbjct: 330 SCIHECTGAHN*CTLSSKADTLSLRFPATASCYHCSG*PQHCLFLSAQWLDCTLSQAHAM 151
Query: 388 TCPVGASTYRRSRGQAEVSQASKGPCLHSYFAICGRSQ*YLSSSTPSDQ 242
CP G S ++ +S S+ C HS AICG+SQ* L SS DQ
Sbjct: 150 ICPEGVSACKKLEALEAMSPVSRAACSHSCSAICGKSQ*CLYSSILPDQ 4
>gb|CN127460.1|CN127460 RHOH1_23_D06.b1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_23_D06_A002 3', mRNA sequence
Length = 814
Score = 247 bits (533), Expect = 3e-064
Identities = 90/158 (56%), Positives = 114/158 (72%)
Frame = +1 / +1
Query: 97 DLNGKVNXXXXXCGXSFHRFDKYLNFSNPHIARNFDPNACGWAYGMNIFDLREWKKKDIT 276
+L+G V C SFHR+ KYLNFS+P I+ DP+ CGWA+GMNIFDL W+K++ T
Sbjct: 1 ELHGNVIGAVETCLESFHRYHKYLNFSHPTISSKIDPHTCGWAFGMNIFDLIAWRKENAT 180
Query: 277 GIYHKWQNMNEDRVLWKLGTLPPGLLTFYKLTHPLDKSWHVLGLGYNPSIDRSEIDNAAV 456
+YH WQ N D +LW+ GTLP GLLTFY L PLD+ WHVLGLGY+ ID I++AAV
Sbjct: 181 SLYHYWQEQNSDLLLWRTGTLPAGLLTFYGLMEPLDRRWHVLGLGYDVDIDDRLIESAAV 360
Query: 457 VHYNGNMKPWLELAMTKYRPYWTKYIKYDHPYIRGCNL 570
VHYNGNMKPWL+LA+ +Y+ W +Y+ HPY+R C L
Sbjct: 361 VHYNGNMKPWLKLAIRRYKYIWERYVNISHPYVRECML 474
Score = 84.5 bits (178), Expect(2) = 3e-021
Identities = 40/69 (57%), Positives = 42/69 (60%)
Frame = -2 / -3
Query: 500 IASSSHGFMFPL**TTAALSISERSMLGLYPNPRTCHDLSSGCVNL*KVKRPGGSVPSFQ 321
IAS S GFMFPL* TTAALSI SM YP P+TCH S G + * VKRP G VP Q
Sbjct: 404 IASFSQGFMFPL*CTTAALSIKRSSMSTSYPRPKTCHLRSRGSIRP*NVKRPAGRVPVLQ 225
Query: 320 RTLSSFIFC 294
S F C
Sbjct: 224 SNRSEFCSC 198
Score = 39.1 bits (79), Expect(2) = 3e-021
Identities = 17/44 (38%), Positives = 24/44 (54%)
Frame = -3 / -1
Query: 262 SSTPSDQRCSSHKPSHMHLDQSSEQCVDLKN*DICQNGENSXHR 131
SS S Q+CS KP H ++DQS + KN D C E + ++
Sbjct: 166 SSKLSSQKCSFQKPIHKYVDQSWS*WLGAKNLDTCDTDETTLNK 35
>gb|CX612893.1|CX612893 GABR1_5_C04.b1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_5_C04_A002 3', mRNA sequence
Length = 762
Score = 240 bits (518), Expect = 3e-062
Identities = 86/143 (60%), Positives = 108/143 (75%)
Frame = +1 / +1
Query: 142 SFHRFDKYLNFSNPHIARNFDPNACGWAYGMNIFDLREWKKKDITGIYHKWQNMNEDRVL 321
SFHR+ KYLNFS+P I+ DP+ CGWA+GMNIFDL W+K++ T +YH WQ N D +L
Sbjct: 4 SFHRYHKYLNFSHPTISSKIDPHTCGWAFGMNIFDLIAWRKENATSLYHYWQEQNSDLLL 183
Query: 322 WKLGTLPPGLLTFYKLTHPLDKSWHVLGLGYNPSIDRSEIDNAAVVHYNGNMKPWLELAM 501
W+ GTLP GLLTFY L PLD+ WHVLGLGY+ ID I++AAVVHYNGNMKPWL+LA+
Sbjct: 184 WRTGTLPAGLLTFYGLMEPLDRRWHVLGLGYDVDIDDRLIESAAVVHYNGNMKPWLKLAI 363
Query: 502 TKYRPYWTKYIKYDHPYIRGCNL 570
+Y+ W +Y+ HPY+R C L
Sbjct: 364 RRYKYIWERYVNISHPYVRECML 432
Score = 84.5 bits (178), Expect(2) = 5e-021
Identities = 40/69 (57%), Positives = 42/69 (60%)
Frame = -2 / -2
Query: 500 IASSSHGFMFPL**TTAALSISERSMLGLYPNPRTCHDLSSGCVNL*KVKRPGGSVPSFQ 321
IAS S GFMFPL* TTAALSI SM YP P+TCH S G + * VKRP G VP Q
Sbjct: 362 IASFSQGFMFPL*CTTAALSIKRSSMSTSYPRPKTCHLRSRGSIRP*NVKRPAGRVPVLQ 183
Query: 320 RTLSSFIFC 294
S F C
Sbjct: 182 SNRSEFCSC 156
Score = 38.2 bits (77), Expect(2) = 5e-021
Identities = 17/41 (41%), Positives = 22/41 (53%)
Frame = -3 / -3
Query: 262 SSTPSDQRCSSHKPSHMHLDQSSEQCVDLKN*DICQNGENS 140
SS S Q+CS KP H ++DQS + KN D C E +
Sbjct: 124 SSKLSSQKCSFQKPIHKYVDQSWS*WLGAKNLDTCDTDETT 2
>gb|CF070980.1|CF070980 FE1_14_F12.g1_A002 Iron-deficient seedlings Sorghum bicolor cDNA
clone FE1_14_F12_A002 5', mRNA sequence
Length = 692
Score = 232 bits (501), Expect = 7e-060
Identities = 85/129 (65%), Positives = 99/129 (76%)
Frame = +1 / -1
Query: 187 IARNFDPNACGWAYGMNIFDLREWKKKDITGIYHKWQNMNEDRVLWKLGTLPPGLLTFYK 366
I F+PNACG AYGMN FDL W+++ T YH WQN NE+R LWKLGTLPPGL+TFY
Sbjct: 692 IKAKFNPNACGGAYGMNFFDLDSWRREKCTEQYHYWQNQNENRTLWKLGTLPPGLITFYS 513
Query: 367 LTHPLDKSWHVLGLGYNPSIDRSEIDNAAVVHYNGNMKPWLELAMTKYRPYWTKYIKYDH 546
T PL+KSWHVLGLGYNPSI EI NAAVVH+NGNMKPWL++ M ++R WTKY+ YD
Sbjct: 512 TTKPLEKSWHVLGLGYNPSISMEEIRNAAVVHFNGNMKPWLDIGMNQFRHLWTKYVDYDD 333
Query: 547 PYIRGCNLS 573
YIR CN +
Sbjct: 332 SYIRQCNFA 306
Score = 114 bits (244), Expect = 2e-024
Identities = 63/125 (50%), Positives = 67/125 (53%)
Frame = -2 / +1
Query: 569 KLHPRM*G*SYLIYLVQYGRYLVIASSSHGFMFPL**TTAALSISERSMLGLYPNPRTCH 390
KLH R+ S Y VQ I SS GF+ PL TTAA IS MLGLYP+PRTC
Sbjct: 310 KLH*RIYESS*STYFVQRCLNWFIPMSSQGFILPLKCTTAAFLISSMLMLGLYPSPRTCQ 489
Query: 389 DLSSGCVNL*KVKRPGGSVPSFQRTLSSFIFCHLW*IPVISFFFHSLRSKMFIP*AQPHA 210
D S G V *KV +PGGSVPSF SF FC W V RSK FIP A P A
Sbjct: 490 DFSRGFVVE*KVIKPGGSVPSFHNVRFSF*FCQ*WYCSVHFSLLQESRSKKFIPYAPPQA 669
Query: 209 FGSKF 195
G F
Sbjct: 670 LGLNF 684
>gb|CF757149.1|CF757149 DSAF1_14_D03.g1_A011 Drought-stressed after flowering Sorghum
bicolor cDNA clone DSAF1_14_D03_A011 3', mRNA sequence
Length = 580
Score = 90.9 bits (192), Expect(4) = 9e-060
Identities = 37/47 (78%), Positives = 38/47 (80%)
Frame = +1 / +2
Query: 595 N*QMRKSLLDRSVPLPCPCGALFDSAKWYYLKLLIAFLPSSPKKNSP 735
N*QMRKSLLDRSVPLPCPCGA FD+AKWYYLKLLI F SP P
Sbjct: 89 N*QMRKSLLDRSVPLPCPCGAFFDTAKWYYLKLLIXFFFPSPSPLLP 229
Score = 90.4 bits (191), Expect(4) = 9e-060
Identities = 40/58 (68%), Positives = 43/58 (74%)
Frame = +1 / +3
Query: 763 L*RCVFLIQLLVICIYIFRQN*QEKNL*NGFVGLVSRVA*RYA*RIECCRNWILFCIR 936
L*RCVFL + FRQN*QEKN *N + LVSR A*RY *RIECCRNWI+FCIR
Sbjct: 267 L*RCVFLFNY**CVVIFFRQN*QEKNF*NVLIRLVSRAA*RYV*RIECCRNWIVFCIR 440
Score = 83.5 bits (176), Expect(4) = 7e-052
Identities = 33/45 (73%), Positives = 39/45 (86%)
Frame = -3 / -2
Query: 946 HFIV*YKKGSNSGNTRFSRHTSKQHATPAPQIHFISFSPANFDGK 812
+ ++*YK+ SNSGNT+FSRHTSKQHATPA HF SFSPANFDG+
Sbjct: 450 YHLI*YKRQSNSGNTQFSRHTSKQHATPAG*AHFRSFSPANFDGR 316
Score = 83.1 bits (175), Expect(4) = 7e-052
Identities = 34/42 (80%), Positives = 36/42 (85%)
Frame = -2 / -2
Query: 719 GEEGRKAIKSLR*YHFAESNNAPQGHGSGTLLSNKLFLICQF 594
GE +K IKS R*YHFA S NAPQGHGSGTLLSN+LFLICQF
Sbjct: 213 GEGKKKXIKSFR*YHFAVSKNAPQGHGSGTLLSNRLFLICQF 88
Score = 81.3 bits (171), Expect(3) = 8e-037
Identities = 37/57 (64%), Positives = 40/57 (70%)
Frame = +3 / +2
Query: 765 IAMRFFNSIISNMHLYFPSKLAGEKLIKWICGAGVACCLEVCLENRVLPELDPFLYQ 935
IAM FF ++ PSKLAGEKL+K AGVACCLEVCLEN VLPELD LYQ
Sbjct: 269 IAMCFFIQLLVMCSYILPSKLAGEKLLKCAYPAGVACCLEVCLEN*VLPELDCLLYQ 439
Score = 81.3 bits (171), Expect(4) = 2e-042
Identities = 40/58 (68%), Positives = 44/58 (75%)
Frame = -1 / -3
Query: 936 SDTKKDPIPATLDSLGIPLSNTRHQPHKSIL*VFLLLILTENINAYY**LN*KNASL* 763
SDTK +PIPATL+SL IPLS+TRHQP K IL VFLLLILTE N + *KN SL*
Sbjct: 440 SDTKDNPIPATLNSLDIPLSSTRHQPDKHILEVFLLLILTEEYNYTLLIIE*KNTSL* 267
Score = 79.9 bits (168), Expect(4) = 9e-060
Identities = 30/30 (100%), Positives = 30/30 (100%)
Frame = +1 / +1
Query: 505 KYRPYWTKYIKYDHPYIRGCNLSE*IVVLK 594
KYRPYWTKYIKYDHPYIRGCNLSE*IVVLK
Sbjct: 1 KYRPYWTKYIKYDHPYIRGCNLSE*IVVLK 90
Score = 75.8 bits (159), Expect(5) = 2e-047
Identities = 34/44 (77%), Positives = 35/44 (79%)
Frame = +2 / +1
Query: 815 SVKISRRKTYKMDLWGWCRVLLRGMPRESSVAGIGSFFVSDDKV 946
SVKISRRKT KM L GWCRVLLRGM RE SVAGIG FVSD +
Sbjct: 319 SVKISRRKTSKMCLSGWCRVLLRGMSRELSVAGIGLSFVSDQMI 450
Score = 70.7 bits (148), Expect(5) = 2e-047
Identities = 30/37 (81%), Positives = 32/37 (86%)
Frame = +3 / +1
Query: 594 KLTDEEELIGQKCSTTMSLRCVIRLSKVVLPQALDCF 704
KLTDEEE +GQKCSTTMSLRCV SKVVLP+ALD F
Sbjct: 88 KLTDEEEPVGQKCSTTMSLRCVF*YSKVVLPEALDXF 198
Score = 70.3 bits (147), Expect(4) = 7e-052
Identities = 29/30 (96%), Positives = 29/30 (96%)
Frame = -1 / -2
Query: 594 FQHDYLLTQVASTDVRVIILDILGPIWSVL 505
FQHDYLLTQVA TDVRVIILDILGPIWSVL
Sbjct: 90 FQHDYLLTQVAPTDVRVIILDILGPIWSVL 1
Score = 69.8 bits (146), Expect(3) = 6e-035
Identities = 33/41 (80%), Positives = 34/41 (82%)
Frame = -2 / -1
Query: 935 LIQKRIQFRQHSIL*AYL*ATRDTSPTNPFYKFFSC*F*RK 813
LIQK IQFRQHSIL* YL*A RDTS + F KFFSC*F*RK
Sbjct: 439 LIQKTIQFRQHSIL*TYL*AARDTSRISTF*KFFSC*F*RK 317
Score = 69.3 bits (145), Expect(4) = 2e-042
Identities = 29/29 (100%), Positives = 29/29 (100%)
Frame = -2 / -3
Query: 593 FSTTIYSLKLHPRM*G*SYLIYLVQYGRY 507
FSTTIYSLKLHPRM*G*SYLIYLVQYGRY
Sbjct: 89 FSTTIYSLKLHPRM*G*SYLIYLVQYGRY 3
Score = 67.5 bits (141), Expect(5) = 2e-047
Identities = 28/29 (96%), Positives = 29/29 (100%)
Frame = +3 / +3
Query: 507 VPTILDQVYQV*SPLHPWMQLE*VDSRAE 593
VPTILDQVYQV*SPLHPW+QLE*VDSRAE
Sbjct: 3 VPTILDQVYQV*SPLHPWVQLE*VDSRAE 89
Score = 65.2 bits (136), Expect(3) = 6e-035
Identities = 23/24 (95%), Positives = 23/24 (95%)
Frame = -3 / -1
Query: 577 THSSCIHGCKGDHT*YTWSNMVGT 506
THSSC HGCKGDHT*YTWSNMVGT
Sbjct: 73 THSSCTHGCKGDHT*YTWSNMVGT 2
Score = 59.7 bits (124), Expect(3) = 8e-037
Identities = 28/29 (96%), Positives = 28/29 (96%)
Frame = +2 / +2
Query: 506 STDHIGPSISSMITLTSVDAT*VSR*SC* 592
STDHIGPSISSMITLTSV AT*VSR*SC*
Sbjct: 2 STDHIGPSISSMITLTSVGAT*VSR*SC* 88
Score = 55.6 bits (115), Expect(4) = 2e-042
Identities = 23/27 (85%), Positives = 24/27 (88%)
Frame = -3 / -3
Query: 700 QSRA*GSTTLLSRITHRKDMVVEHFCP 620
QSRA GSTTLL + THRKDMVVEHFCP
Sbjct: 194 QSRASGSTTLLYQKTHRKDMVVEHFCP 114
Score = 52.8 bits (109), Expect(3) = 8e-037
Identities = 20/23 (86%), Positives = 22/23 (95%)
Frame = +2 / +3
Query: 593 KTDR*GRAYWTEVFHYHVLAVRY 661
+TDR*GRA WTEVFHYHVLAVR+
Sbjct: 87 ETDR*GRACWTEVFHYHVLAVRF 155
Score = 52.4 bits (108), Expect(3) = 6e-035
Identities = 24/38 (63%), Positives = 24/38 (63%)
Frame = -1 / -1
Query: 708 EESNQXXXXXXXXXXX*RTARTW*WNTSVQ*ALPHLSV 595
EE NQ RTARTW*WNTSVQ ALPHLSV
Sbjct: 202 EEXNQELQVVPLCCIKKRTARTW*WNTSVQQALPHLSV 89
Score = 28.1 bits (55), Expect(4) = 9e-060
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +2 / +1
Query: 725 KIHRWLF*RVMYYYSDAFF 781
KIH W+F*RV +Y F+
Sbjct: 232 KIHWWMF*RVFFYSDVFFY 288
Score = 27.2 bits (53), Expect(5) = 2e-047
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = +3 / +2
Query: 726 KFTGGCSDE*CIIIAMRFFNSII 794
KFTGGCSDE I F ++
Sbjct: 233 KFTGGCSDEFFFIAMCFFIQLLV 301
Score = 25.8 bits (50), Expect(4) = 7e-052
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = -3 / -2
Query: 754 HSSEQPPVNFSWERRGGK 701
+SSE PPVNF R G+
Sbjct: 261 NSSEHPPVNFQGRRGEGE 208
Score = 24.0 bits (46), Expect(4) = 2e-042
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = -1 / -3
Query: 753 TRQNSHR*IFLGRGGE 706
TRQN H+*IF G G+
Sbjct: 260 TRQNIHQ*IFRGGEGK 213
Score = 24.0 bits (46), Expect(5) = 2e-047
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = +1 / +2
Query: 778 FLIQLLVICIYI 813
F IQLLV+C YI
Sbjct: 281 FFIQLLVMCSYI 316
>gb|CW285991.1|CW285991 104_763_11410641_116_35511_039 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11410641, DNA
sequence
Length = 612
Score = 220 bits (474), Expect = 4e-056
Identities = 80/92 (86%), Positives = 89/92 (96%)
Frame = +1 / +2
Query: 304 NEDRVLWKLGTLPPGLLTFYKLTHPLDKSWHVLGLGYNPSIDRSEIDNAAVVHYNGNMKP 483
NE+R+LWKLGTLPPGLLTFYKLTHPLDKSWHVLGLGYNP+I+RSEIDNAAV+HYNGNMKP
Sbjct: 62 NENRLLWKLGTLPPGLLTFYKLTHPLDKSWHVLGLGYNPTIERSEIDNAAVIHYNGNMKP 241
Query: 484 WLELAMTKYRPYWTKYIKYDHPYIRGCNLSE* 579
WLE+AMTKYRPYWTKYI Y+HPYI GC +S+*
Sbjct: 242 WLEIAMTKYRPYWTKYINYEHPYIHGCKISQ* 337
Score = 147 bits (315), Expect = 3e-034
Identities = 67/92 (72%), Positives = 73/92 (79%)
Frame = -2 / -1
Query: 578 YSLKLHPRM*G*SYLIYLVQYGRYLVIASSSHGFMFPL**TTAALSISERSMLGLYPNPR 399
Y L LHP M G S L+Y VQ GRY VIA SSHGFM PL* TAALSISERSM+GLYP P
Sbjct: 336 YWLILHP*MYGCS*LMYFVQ*GRYFVIAISSHGFMLPL*WMTAALSISERSMVGLYPKPS 157
Query: 398 TCHDLSSGCVNL*KVKRPGGSVPSFQRTLSSF 303
TCHDLS GCV+L*KV+ PGG+VPSFQ +L SF
Sbjct: 156 TCHDLSRGCVSL*KVRSPGGNVPSFQSSLFSF 61
Score = 116 bits (247), Expect = 7e-025
Identities = 45/88 (51%), Positives = 61/88 (69%)
Frame = +3 / +1
Query: 303 E*RQGPLEAWDTSAWPLDLL*VDAPTGQVMACSWIRIQPKH*PFRDRQCCCGSLQWEHEA 482
E Q LE D ++ + L D P+GQ+MAC+W+R+Q H* RDRQCC LQW HEA
Sbjct: 61 EREQAALETGDIASRASNFLQADTPSGQIMACAWLRVQSNH*ALRDRQCCGHPLQW*HEA 240
Query: 483 MAGASNDQVPTILDQVYQV*SPLHPWMQ 566
+AG ND+V +LD+V+Q+*+P+H WMQ
Sbjct: 241 VAGNRNDKVSALLDKVHQL*APVHSWMQ 324
Score = 109 bits (233), Expect = 6e-023
Identities = 46/93 (49%), Positives = 67/93 (72%)
Frame = -1 / -3
Query: 582 YLLTQVASTDVRVIILDILGPIWSVLGHC*LQPWLHVPIVMNHSSIVYL*TVNAWVVS*S 403
+LL +AS +VRV+I+D+L P+ +L HC QP LHV IV++ SIVYL* +N W+V *+
Sbjct: 340 FLLADLASMNVRVLIIDVLCPVRPILCHCDFQPRLHVTIVVDDRSIVYL*ALNGWIVP*A 161
Query: 402 KNMP*LVQWVRQLIEGQEARRKCPKLPKDPVFI 304
K+MP* VQ V QL++ + R+CP+ P+ PV +
Sbjct: 160 KHMP*FVQRVCQLVKS*KPWRQCPQFPEQPVLV 62
>gb|BF587532.1|BF587532 FM1_37_E11.g1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 632
Score = 210 bits (453), Expect = 3e-053
Identities = 77/117 (65%), Positives = 90/117 (76%)
Frame = +1 / +1
Query: 223 AYGMNIFDLREWKKKDITGIYHKWQNMNEDRVLWKLGTLPPGLLTFYKLTHPLDKSWHVL 402
AYGMN FDL W+++ T YH WQN NE+R LWKLGTLP GL+TFY T PL+KSWHVL
Sbjct: 1 AYGMNFFDLDSWRREKCTEQYHYWQNQNENRTLWKLGTLPXGLITFYSTTKPLEKSWHVL 180
Query: 403 GLGYNPSIDRSEIDNAAVVHYNGNMKPWLELAMTKYRPYWTKYIKYDHPYIRGCNLS 573
GLGYNPSI EI NAAVVH+NGNMKPWL++ M ++R WTKY+ YD YIR CN +
Sbjct: 181 GLGYNPSISMEEIRNAAVVHFNGNMKPWLDIGMNQFRHLWTKYVDYDDSYIRQCNFA 351
Score = 104 bits (221), Expect = 3e-021
Identities = 58/114 (50%), Positives = 61/114 (53%)
Frame = -2 / -1
Query: 569 KLHPRM*G*SYLIYLVQYGRYLVIASSSHGFMFPL**TTAALSISERSMLGLYPNPRTCH 390
KLH R+ S Y VQ I SS GFM PL TTAA IS MLGLYP+PRTC
Sbjct: 347 KLH*RIYESS*STYFVQRCLNWFIPMSSQGFMLPLKCTTAAFLISSMLMLGLYPSPRTCQ 168
Query: 389 DLSSGCVNL*KVKRPGGSVPSFQRTLSSFIFCHLW*IPVISFFFHSLRSKMFIP 228
D S G V *KV +P GSVPSF SF FC W V RSK FIP
Sbjct: 167 DFSRGFVVE*KVIKPXGSVPSFHNVRFSF*FCQ*WYCSVHFSLLQESRSKKFIP 6
>gb|BI139893.1|BI139893 IP1_47_A12.b1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 598
Score = 126 bits (269), Expect(3) = 1e-051
Identities = 42/94 (44%), Positives = 59/94 (62%)
Frame = +1 / +2
Query: 295 QNMNEDRVLWKLGTLPPGLLTFYKLTHPLDKSWHVLGLGYNPSIDRSEIDNAAVVHYNGN 474
+N+ LWK GTLPP L+ F H +D SWH+LGLGY D + AAV+HYNG
Sbjct: 284 ENLKSGLTLWKFGTLPPALIAFRGHVHGIDPSWHLLGLGYQDKTDIESVRRAAVIHYNGQ 463
Query: 475 MKPWLELAMTKYRPYWTKYIKYDHPYIRGCNLSE 576
KPWL++A +P+WTK++ Y ++R C++ E
Sbjct: 464 CKPWLDIAFKNLQPFWTKHVNYSXDFVRNCHILE 565
Score = 82.2 bits (173), Expect(3) = 1e-051
Identities = 30/52 (57%), Positives = 35/52 (67%)
Frame = +1 / +2
Query: 151 RFDKYLNFSNPHIARNFDPNACGWAYGMNIFDLREWKKKDITGIYHKWQNMN 306
RF Y NFS+P IAR+ DP+ C WAYGMNIFDL W+K +I YH W N
Sbjct: 134 RFRTYFNFSHPVIARSLDPDECAWAYGMNIFDLAAWRKTNIRDTYHFWLKEN 289
Score = 35.9 bits (72), Expect(3) = 1e-051
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = +1 / +2
Query: 40 LFXXXDIVVXXDLTXXWDVDLNGKVNXXXXXC 135
+F DIVV DL+ W ++L GKVN C
Sbjct: 8 VFLDDDIVVQRDLSPLWAINLEGKVNGAVETC 103
>gb|CD234655.1|CD234655 SS1_17_C07.b1_A012 Salt-stressed seedlings Sorghum bicolor cDNA
clone SS1_17_C07_A012 3', mRNA sequence
Length = 683
Score = 196 bits (422), Expect = 5e-049
Identities = 70/117 (59%), Positives = 88/117 (75%)
Frame = +1 / +3
Query: 220 WAYGMNIFDLREWKKKDITGIYHKWQNMNEDRVLWKLGTLPPGLLTFYKLTHPLDKSWHV 399
WA+GMNIFDL W+K++ T +YH WQ N D +LW+ GTLP GLLTFY L PLD+ WHV
Sbjct: 3 WAFGMNIFDLIAWRKENATSLYHYWQEQNSDLLLWRTGTLPAGLLTFYGLMEPLDRRWHV 182
Query: 400 LGLGYNPSIDRSEIDNAAVVHYNGNMKPWLELAMTKYRPYWTKYIKYDHPYIRGCNL 570
LGLGY+ ID I++AAVVHYNGNMKPWL+LA+ +Y+ W +Y+ HPY+R C L
Sbjct: 183 LGLGYDVDIDDRLIESAAVVHYNGNMKPWLKLAIRRYKYIWERYVNISHPYVRECML 353
>gb|CW306008.1|CW306008 104_791_11466607_148_36273_024 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11466607, DNA
sequence
Length = 675
Score = 118 bits (252), Expect(2) = 2e-048
Identities = 42/73 (57%), Positives = 55/73 (75%)
Frame = +1 / -1
Query: 337 LPPGLLTFYKLTHPLDKSWHVLGLGYNPSIDRSEIDNAAVVHYNGNMKPWLELAMTKYRP 516
LP GL+TFY T PLDKSWHV+GLGYNP I +I AAV+H+NGNMKPWL++A +Y+
Sbjct: 252 LPVGLMTFYGKTKPLDKSWHVMGLGYNPHIRPEDIGGAAVIHFNGNMKPWLDVAFNQYKH 73
Query: 517 YWTKYIKYDHPYI 555
WTKY+ + ++
Sbjct: 72 LWTKYVDTEMEFL 34
Score = 99.1 bits (210), Expect(2) = 2e-048
Identities = 34/83 (40%), Positives = 49/83 (59%)
Frame = +1 / -3
Query: 55 DIVVXXDLTXXWDVDLNGKVNXXXXXCGXSFHRFDKYLNFSNPHIARNFDPNACGWAYGM 234
D+VV DL W VD+ VN C F R+ KYLNFS P + +F AC W+YG+
Sbjct: 646 DVVVQRDLAGLWRVDMGANVNAALHTCFGGFRRYGKYLNFSEPVVQESFSHRACAWSYGV 467
Query: 235 NIFDLREWKKKDITGIYHKWQNM 303
N+FDL+ W+++ T +H++ M
Sbjct: 466 NVFDLQGWRREQCTQQFHRFMEM 398
>gb|CL193723.1|CL193723 104_417_10941134_116_32279_053 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10941134, DNA
sequence
Length = 686
Score = 151 bits (324), Expect(2) = 2e-047
Identities = 54/67 (80%), Positives = 58/67 (86%)
Frame = +1 / +2
Query: 103 NGKVNXXXXXCGXSFHRFDKYLNFSNPHIARNFDPNACGWAYGMNIFDLREWKKKDITGI 282
NG VN CG SFHRFDKYLNFSNP+I++NFDPNACGWAYGMN+FDL EWK KDITGI
Sbjct: 2 NGNVNGAVETCGESFHRFDKYLNFSNPNISQNFDPNACGWAYGMNMFDLEEWKNKDITGI 181
Query: 283 YHKWQNM 303
YHKWQNM
Sbjct: 182 YHKWQNM 202
Score = 88.6 bits (187), Expect(2) = 6e-024
Identities = 38/67 (56%), Positives = 41/67 (61%)
Frame = -2 / -3
Query: 302 IFCHLW*IPVISFFFHSLRSKMFIP*AQPHAFGSKFRAMCGFEXXXXXXXXXXXXPQXXX 123
+FCHLW*IPV+S FFHS RS MFIP*AQPHA GSKF + GFE P
Sbjct: 201 MFCHLW*IPVMSLFFHSSRSNMFIP*AQPHALGSKF*EIFGFEKLRYLSNR*KLSPHVST 22
Query: 122 XXLTFPL 102
TFPL
Sbjct: 21 APFTFPL 1
Score = 62.5 bits (130), Expect(2) = 2e-047
Identities = 23/26 (88%), Positives = 25/26 (96%)
Frame = +1 / +1
Query: 304 NEDRVLWKLGTLPPGLLTFYKLTHPL 381
NE+R+LWKLGTLPPGL TFYKLTHPL
Sbjct: 607 NENRLLWKLGTLPPGLSTFYKLTHPL 684
Score = 46.4 bits (95), Expect(2) = 6e-024
Identities = 19/27 (70%), Positives = 23/27 (85%)
Frame = -2 / -1
Query: 383 SSGCVNL*KVKRPGGSVPSFQRTLSSF 303
S GCV+L*KV+ PGG+VPSFQ +L SF
Sbjct: 686 SRGCVSL*KVESPGGNVPSFQSSLFSF 606
>gb|BM331533.1|BM331533 PIC1_72_D10.g1_A002 Pathogen-infected compatible 1 (PIC1) Sorghum
bicolor cDNA, mRNA sequence
Length = 596
Score = 187 bits (403), Expect = 2e-046
Identities = 64/95 (67%), Positives = 85/95 (89%)
Frame = +1 / +2
Query: 280 IYHKWQNMNEDRVLWKLGTLPPGLLTFYKLTHPLDKSWHVLGLGYNPSIDRSEIDNAAVV 459
IYH WQ++NEDR LWKLGTLPPGL+TFY LT+PL+++WHVLGLGY+P++D +EIDNAAVV
Sbjct: 2 IYHYWQDLNEDRKLWKLGTLPPGLITFYNLTYPLNRTWHVLGLGYDPAVDIAEIDNAAVV 181
Query: 460 HYNGNMKPWLELAMTKYRPYWTKYIKYDHPYIRGC 564
HYNGN KPWL+LA++KY+ YW+KY+ D+ +++ C
Sbjct: 182 HYNGNYKPWLDLAISKYKTYWSKYVDVDNSHVQHC 286
>gb|CW285992.1|CW285992 104_763_11410641_148_35507_039 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11410641, DNA
sequence
Length = 694
Score = 178 bits (383), Expect = 1e-043
Identities = 64/75 (85%), Positives = 71/75 (94%)
Frame = +1 / -1
Query: 355 TFYKLTHPLDKSWHVLGLGYNPSIDRSEIDNAAVVHYNGNMKPWLELAMTKYRPYWTKYI 534
TFYKLTHPLDKSWHVLGLGYNP++ RSEIDNAAV+HYNGNMKPWLE+AMTKYRPYWTKYI
Sbjct: 694 TFYKLTHPLDKSWHVLGLGYNPTMXRSEIDNAAVIHYNGNMKPWLEIAMTKYRPYWTKYI 515
Query: 535 KYDHPYIRGCNLSE* 579
Y+HPYI GC +S+*
Sbjct: 514 NYEHPYIHGCKISQ* 470
Score = 116 bits (248), Expect = 5e-025
Identities = 54/74 (72%), Positives = 57/74 (77%)
Frame = -2 / +3
Query: 578 YSLKLHPRM*G*SYLIYLVQYGRYLVIASSSHGFMFPL**TTAALSISERSMLGLYPNPR 399
Y L LHP M G S L+Y VQ GRY VIA SSHGFM PL* TAALSISER M+GLYP P
Sbjct: 471 YWLILHP*MYGCS*LMYFVQ*GRYFVIAISSHGFMLPL*WMTAALSISERXMVGLYPKPS 650
Query: 398 TCHDLSSGCVNL*K 357
TCHDLS GCV+L*K
Sbjct: 651 TCHDLSRGCVSL*K 692
Score = 107 bits (228), Expect = 3e-022
Identities = 38/66 (57%), Positives = 51/66 (77%)
Frame = +3 / -3
Query: 369 DAPTGQVMACSWIRIQPKH*PFRDRQCCCGSLQWEHEAMAGASNDQVPTILDQVYQV*SP 548
D P+GQ+MAC+W+R+Q H RDRQCC LQW HEA+AG ND+V +LD+V+Q+*+P
Sbjct: 680 DTPSGQIMACAWLRVQSNHXALRDRQCCGHPLQW*HEAVAGNRNDKVSALLDKVHQL*AP 501
Query: 549 LHPWMQ 566
+H WMQ
Sbjct: 500 VHSWMQ 483
>gb|BM329584.1|BM329584 PIC1_40_E09.g1_A002 Pathogen-infected compatible 1 (PIC1) Sorghum
bicolor cDNA, mRNA sequence
Length = 628
Score = 172 bits (370), Expect = 8e-042
Identities = 59/93 (63%), Positives = 76/93 (81%)
Frame = +1 / +3
Query: 295 QNMNEDRVLWKLGTLPPGLLTFYKLTHPLDKSWHVLGLGYNPSIDRSEIDNAAVVHYNGN 474
Q +NEDR LWKLGTLPPGL+TF+ T PL +SWHVLGLGYNP ++ +I+ AAV+HYNGN
Sbjct: 3 QKLNEDRSLWKLGTLPPGLITFWNKTFPLSRSWHVLGLGYNPHVNSRDIERAAVIHYNGN 182
Query: 475 MKPWLELAMTKYRPYWTKYIKYDHPYIRGCNLS 573
MKPWLE+ + KYR YW+KY+ YD ++R CN++
Sbjct: 183 MKPWLEIGLPKYRSYWSKYLDYDQSFLRECNIN 281
>gb|CW144376.1|CW144376 104_536_11137911_116_34966_056 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11137911, DNA
sequence
Length = 547
Score = 90.4 bits (191), Expect(3) = 1e-037
Identities = 40/58 (68%), Positives = 43/58 (74%)
Frame = +1 / -3
Query: 763 L*RCVFLIQLLVICIYIFRQN*QEKNL*NGFVGLVSRVA*RYA*RIECCRNWILFCIR 936
L*RCVFL + FRQN*QEKN *N + LVSR A*RY *RIECCRNWI+FCIR
Sbjct: 395 L*RCVFLFNY**CVVIFFRQN*QEKNF*NVLIRLVSRAA*RYV*RIECCRNWIVFCIR 222
Score = 83.5 bits (176), Expect(3) = 4e-031
Identities = 33/45 (73%), Positives = 39/45 (86%)
Frame = -3 / +2
Query: 946 HFIV*YKKGSNSGNTRFSRHTSKQHATPAPQIHFISFSPANFDGK 812
+ ++*YK+ SNSGNT+FSRHTSKQHATPA HF SFSPANFDG+
Sbjct: 212 YHLI*YKRQSNSGNTQFSRHTSKQHATPAG*AHFRSFSPANFDGR 346
Score = 81.3 bits (171), Expect(2) = 8e-028
Identities = 40/58 (68%), Positives = 44/58 (75%)
Frame = -1 / +3
Query: 936 SDTKKDPIPATLDSLGIPLSNTRHQPHKSIL*VFLLLILTENINAYY**LN*KNASL* 763
SDTK +PIPATL+SL IPLS+TRHQP K IL VFLLLILTE N + *KN SL*
Sbjct: 222 SDTKDNPIPATLNSLDIPLSSTRHQPDKHILEVFLLLILTEEYNYTLLIIE*KNTSL* 395
Score = 78.0 bits (164), Expect(3) = 1e-037
Identities = 30/38 (78%), Positives = 32/38 (84%)
Frame = +1 / -3
Query: 622 DRSVPLPCPCGALFDSAKWYYLKLLIAFLPSSPKKNSP 735
DRSVPLPCPCGA FD+AKWYYLKL IAFL SP +SP
Sbjct: 545 DRSVPLPCPCGAFFDTAKWYYLKLWIAFLLPSPPLSSP 432
Score = 75.8 bits (159), Expect(4) = 7e-032
Identities = 34/44 (77%), Positives = 35/44 (79%)
Frame = +2 / -1
Query: 815 SVKISRRKTYKMDLWGWCRVLLRGMPRESSVAGIGSFFVSDDKV 946
SVKISRRKT KM L GWCRVLLRGM RE SVAGIG FVSD +
Sbjct: 343 SVKISRRKTSKMCLSGWCRVLLRGMSRELSVAGIGLSFVSDQMI 212
Score = 67.5 bits (141), Expect(4) = 7e-032
Identities = 27/32 (84%), Positives = 29/32 (90%)
Frame = +3 / -2
Query: 621 GQKCSTTMSLRCVIRLSKVVLPQALDCFPPLL 716
GQKCSTTMSLRCV+ SKVVLP+ALDCFPP L
Sbjct: 546 GQKCSTTMSLRCVL*YSKVVLPEALDCFPPPL 451
Score = 64.8 bits (135), Expect(3) = 4e-031
Identities = 27/32 (84%), Positives = 28/32 (87%)
Frame = -3 / +2
Query: 715 RRGGKQSRA*GSTTLLSRITHRKDMVVEHFCP 620
R GGKQSRA GSTTLL + THRKDMVVEHFCP
Sbjct: 452 RGGGKQSRASGSTTLLYQRTHRKDMVVEHFCP 547
Score = 64.3 bits (134), Expect(2) = 8e-028
Identities = 29/39 (74%), Positives = 31/39 (79%)
Frame = -2 / +1
Query: 737 TGEFFLGEEGRKAIKSLR*YHFAESNNAPQGHGSGTLLS 621
+GE GE RKAI+S R*YHFA S NAPQGHGSGTLLS
Sbjct: 430 SGEERGGEGRRKAIQSFR*YHFAVSKNAPQGHGSGTLLS 546
Score = 28.1 bits (55), Expect(3) = 1e-037
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +2 / -1
Query: 725 KIHRWLF*RVMYYYSDAFF 781
KIH W+F*RV +Y F+
Sbjct: 430 KIHWWMF*RVFFYSDVFFY 374
Score = 27.2 bits (53), Expect(4) = 7e-032
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = +3 / -2
Query: 726 KFTGGCSDE*CIIIAMRFFNSII 794
KFTGGCSDE I F ++
Sbjct: 429 KFTGGCSDEFFFIAMCFFIQLLV 361
Score = 26.3 bits (51), Expect(3) = 4e-031
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = -3 / +2
Query: 754 HSSEQPPVNFSWERRGGK 701
+SSE PPVNF R G+
Sbjct: 401 NSSEHPPVNFQGRRGEGR 454
Score = 24.0 bits (46), Expect(4) = 7e-032
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = +1 / -2
Query: 778 FLIQLLVICIYI 813
F IQLLV+C YI
Sbjct: 381 FFIQLLVMCSYI 346
>gb|CW031244.1|CW031244 104_259_10500694_114_30397 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10500694, DNA
sequence
Length = 776
Score = 155 bits (332), Expect = 1e-036
Identities = 56/108 (51%), Positives = 73/108 (67%)
Frame = +1 / +3
Query: 1 FYLPXVYPKLXXXLFXXXDIVVXXDLTXXWDVDLNGKVNXXXXXCGXSFHRFDKYLNFSN 180
FY+P +YP+L +F DIVV DL+ + ++LNG V C +FHRF KYLN S+
Sbjct: 453 FYIPEIYPELQKVVFLDDDIVVQKDLSELFTINLNGNVMGAVETCMETFHRFHKYLNHSH 632
Query: 181 PHIARNFDPNACGWAYGMNIFDLREWKKKDITGIYHKWQNMNEDRVLW 324
P I +FDP+ACGWA+GMN+ DL EW+ K++TGIYH WQ N D LW
Sbjct: 633 PLIRAHFDPDACGWAFGMNVLDLVEWRNKNVTGIYHYWQERNSDHTLW 776
>gb|CF480371.1|CF480371 POL1_65_H05.b1_A002 Pollen Sorghum bicolor cDNA clone
POL1_65_H05_A002 3', mRNA sequence
Length = 430
Score = 153 bits (328), Expect = 5e-036
Identities = 55/66 (83%), Positives = 62/66 (93%)
Frame = +1 / +2
Query: 382 DKSWHVLGLGYNPSIDRSEIDNAAVVHYNGNMKPWLELAMTKYRPYWTKYIKYDHPYIRG 561
DKSWHVLGLGYNP+I+RSEIDNAAV+HYNGNMKPWLE+AMTKYRPYWTKYI Y+ PYI G
Sbjct: 2 DKSWHVLGLGYNPTIERSEIDNAAVIHYNGNMKPWLEIAMTKYRPYWTKYINYEPPYIHG 181
Query: 562 CNLSE* 579
C +S+*
Sbjct: 182 CKISQ* 199
Score = 105 bits (223), Expect = 1e-021
Identities = 49/66 (74%), Positives = 51/66 (77%)
Frame = -2 / -2
Query: 578 YSLKLHPRM*G*SYLIYLVQYGRYLVIASSSHGFMFPL**TTAALSISERSMLGLYPNPR 399
Y L LHP M G S L+Y VQ GRY VIA SSHGFM PL* TAALSISERSM+GLYP P
Sbjct: 198 YWLILHP*MYGGS*LMYFVQ*GRYFVIAISSHGFMLPL*WMTAALSISERSMVGLYPKPS 19
Query: 398 TCHDLS 381
TCHDLS
Sbjct: 18 TCHDLS 1
Score = 103 bits (219), Expect = 5e-021
Identities = 37/62 (59%), Positives = 49/62 (79%)
Frame = +3 / +1
Query: 381 GQVMACSWIRIQPKH*PFRDRQCCCGSLQWEHEAMAGASNDQVPTILDQVYQV*SPLHPW 560
GQ+MAC+W+R+Q H* RDRQCC LQW HEA+AG ND+V +LD+V+Q+*+P+H W
Sbjct: 1 GQIMACAWLRVQSNH*ALRDRQCCGHPLQW*HEAVAGNRNDKVSALLDKVHQL*APVHSW 180
Query: 561 MQ 566
MQ
Sbjct: 181 MQ 186
>gb|BZ695088.1|BZ695088 SP__Ba0057N21.r SP__Ba Sorghum propinquum genomic clone
SP__Ba0057N21 3', DNA sequence
Length = 1000
Score = 148 bits (317), Expect = 2e-034
Identities = 53/91 (58%), Positives = 69/91 (75%)
Frame = +1 / -3
Query: 1 FYLPXVYPKLXXXLFXXXDIVVXXDLTXXWDVDLNGKVNXXXXXCGXSFHRFDKYLNFSN 180
FYLP +YPKL +F DIVV DLT W +++ GKVN CG SFHR+D+YLNFSN
Sbjct: 302 FYLPEIYPKLDKMVFLDDDIVVKKDLTALWSINMKGKVNGAVETCGESFHRYDRYLNFSN 123
Query: 181 PHIARNFDPNACGWAYGMNIFDLREWKKKDI 273
P IA++FDP+A GWA+GMN+FDL EW++++I
Sbjct: 122 PIIAKSFDPHAGGWAFGMNVFDLAEWRRQNI 30
>gb|CW789437.1|CW789437 SP__Ba0057N21.r SP__Ba Sorghum propinquum genomic clone
SP__Ba0057N21 3', DNA sequence
Length = 714
Score = 146 bits (313), Expect = 6e-034
Identities = 52/90 (57%), Positives = 68/90 (75%)
Frame = +1 / -2
Query: 1 FYLPXVYPKLXXXLFXXXDIVVXXDLTXXWDVDLNGKVNXXXXXCGXSFHRFDKYLNFSN 180
FYLP +YPKL +F DIVV DLT W +++ GKVN CG SFHR+D+YLNFSN
Sbjct: 272 FYLPEIYPKLDKMVFLDDDIVVKKDLTALWSINMKGKVNGAVETCGESFHRYDRYLNFSN 93
Query: 181 PHIARNFDPNACGWAYGMNIFDLREWKKKD 270
P IA++FDP+A GWA+GMN+FDL EW++++
Sbjct: 92 PIIAKSFDPHAGGWAFGMNVFDLAEWRRQN 3
>gb|CW381875.1|CW381875 fsbb001f063h19k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f063h19, DNA
sequence
Length = 722
Score = 136 bits (291), Expect = 6e-031
Identities = 46/84 (54%), Positives = 67/84 (79%)
Frame = +1 / +2
Query: 319 LWKLGTLPPGLLTFYKLTHPLDKSWHVLGLGYNPSIDRSEIDNAAVVHYNGNMKPWLELA 498
LWK G+LP G LTFY T PLD WHV GLG++ SI R+E+++A+V+HY+G +KPWLE++
Sbjct: 77 LWKPGSLPLGQLTFYNRTLPLDHRWHVFGLGHDFSIGRNELESASVIHYSGKLKPWLEIS 256
Query: 499 MTKYRPYWTKYIKYDHPYIRGCNL 570
+ KYR YW +Y+ YD+P+++ CN+
Sbjct: 257 IPKYRDYWNRYLNYDNPHLQQCNI 328
>gb|CF482490.1|CF482490 POL1_7_F08.b1_A002 Pollen Sorghum bicolor cDNA clone
POL1_7_F08_A002 3', mRNA sequence
Length = 521
Score = 120 bits (257), Expect = 3e-026
Identities = 43/64 (67%), Positives = 51/64 (79%)
Frame = +1 / +2
Query: 382 DKSWHVLGLGYNPSIDRSEIDNAAVVHYNGNMKPWLELAMTKYRPYWTKYIKYDHPYIRG 561
+KSWHVLGLGYNPSI EI NAAVVH+NGNMKPWL++ M ++R WTKY+ YD YIR
Sbjct: 2 EKSWHVLGLGYNPSISMEEIRNAAVVHFNGNMKPWLDIGMNQFRHLWTKYVDYDDSYIRQ 181
Query: 562 CNLS 573
CN +
Sbjct: 182 CNFA 193
>gb|CL158360.1|CL158360 104_347_10803488_114_31377_080 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10803488, DNA
sequence
Length = 727
Score = 118 bits (252), Expect = 1e-025
Identities = 42/77 (54%), Positives = 58/77 (75%)
Frame = +1 / +2
Query: 337 LPPGLLTFYKLTHPLDKSWHVLGLGYNPSIDRSEIDNAAVVHYNGNMKPWLELAMTKYRP 516
L GL++FY T PLDKSWHV+GLGYNPSI I +AAV+H++GNMKPWL++A+ +Y+
Sbjct: 470 LTAGLMSFYGNTKPLDKSWHVMGLGYNPSISPEAIRSAAVIHFDGNMKPWLDVALNQYKA 649
Query: 517 YWTKYIKYDHPYIRGCN 567
WTKY+ + ++ CN
Sbjct: 650 LWTKYVDTEMEFLTLCN 700
>gb|CL158361.1|CL158361 104_347_10803488_116_31378_080 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10803488, DNA
sequence
Length = 731
Score = 118 bits (252), Expect = 1e-025
Identities = 42/77 (54%), Positives = 58/77 (75%)
Frame = +1 / -3
Query: 337 LPPGLLTFYKLTHPLDKSWHVLGLGYNPSIDRSEIDNAAVVHYNGNMKPWLELAMTKYRP 516
L GL++FY T PLDKSWHV+GLGYNPSI I +AAV+H++GNMKPWL++A+ +Y+
Sbjct: 366 LTAGLMSFYGNTKPLDKSWHVMGLGYNPSISPEAIRSAAVIHFDGNMKPWLDVALNQYKA 187
Query: 517 YWTKYIKYDHPYIRGCN 567
WTKY+ + ++ CN
Sbjct: 186 LWTKYVDTEMEFLTLCN 136
>gb|CF769345.1|CF769345 DSBF1_1_C05.b1_A010 Drought-stressed before flowering Sorghum
bicolor cDNA clone DSBF1_1_C05_A010 5', mRNA sequence
Length = 580
Score = 117 bits (250), Expect = 3e-025
Identities = 39/78 (50%), Positives = 53/78 (67%)
Frame = +1 / +1
Query: 343 PGLLTFYKLTHPLDKSWHVLGLGYNPSIDRSEIDNAAVVHYNGNMKPWLELAMTKYRPYW 522
PGL+ F HP+D SWH+LGLGY D S ++ AAV+HYNG KPWLE+ +P+W
Sbjct: 1 PGLIAFKGHVHPIDPSWHLLGLGYQEKTDISSVEQAAVIHYNGQSKPWLEIGFKHLQPFW 180
Query: 523 TKYIKYDHPYIRGCNLSE 576
TKY+ Y + +IR C++ E
Sbjct: 181 TKYVNYSNEFIRNCHIME 234
>gb|BI212063.1|BI212063 IP1_61_B03.g1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 648
Score = 86.8 bits (183), Expect(3) = 2e-024
Identities = 33/89 (37%), Positives = 52/89 (58%)
Frame = +1 / +1
Query: 307 EDRVLWKLGTLPPGLLTFYKLTHPLDKSWHVLGLGYNPSIDRSEIDNAAVVHYNGNMKPW 486
+D + + P LL+F L +PLD+ + GLGY+ ID +A +HYNGNMKPW
Sbjct: 214 KDELSLRAAAFPLSLLSFQHLIYPLDEKLTLAGLGYDYGIDEVVARRSASLHYNGNMKPW 393
Query: 487 LELAMTKYRPYWTKYIKYDHPYIRGCNLS 573
LEL + Y+ YW +++ ++ CN++
Sbjct: 394 LELGIPDYKKYWKRFLVRGDRFMDECNVN 480
Score = 40.0 bits (81), Expect(3) = 2e-024
Identities = 11/29 (37%), Positives = 20/29 (68%)
Frame = +1 / +1
Query: 199 FDPNACGWAYGMNIFDLREWKKKDITGIY 285
+DPN C W G+N+ +L +W++ ++T Y
Sbjct: 100 YDPNLCAWMSGVNLINLDKWREHNVTENY 186
Score = 24.9 bits (48), Expect(3) = 2e-024
Identities = 7/17 (41%), Positives = 10/17 (58%)
Frame = +1 / +1
Query: 88 WDVDLNGKVNXXXXXCG 138
W++D+ KVN CG
Sbjct: 7 WNIDMGDKVNGAVELCG 57
>gb|CW158441.1|CW158441 104_564_11148823_148_36396_028 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11148823, DNA
sequence
Length = 643
Score = 113 bits (242), Expect = 4e-024
Identities = 40/101 (39%), Positives = 58/101 (57%)
Frame = +1 / -3
Query: 1 FYLPXVYPKLXXXLFXXXDIVVXXDLTXXWDVDLNGKVNXXXXXCGXSFHRFDKYLNFSN 180
FYLP ++P L + D+VV DL W VD+ VN C F R+ KYLNFS
Sbjct: 380 FYLPEMFPALRRVVLLEDDVVVQRDLAGLWRVDMGANVNAALHTCFGGFRRYGKYLNFSE 201
Query: 181 PHIARNFDPNACGWAYGMNIFDLREWKKKDITGIYHKWQNM 303
P + +F AC W+YG+N+FDL+ W+++ T +H++ M
Sbjct: 200 PVVQESFSHRACAWSYGVNVFDLQGWRREQCTQQFHRFMEM 78
>gb|CW229988.1|CW229988 104_671_11207609_148_37265_071 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11207609, DNA
sequence
Length = 621
Score = 113 bits (242), Expect = 4e-024
Identities = 40/101 (39%), Positives = 58/101 (57%)
Frame = +1 / -3
Query: 1 FYLPXVYPKLXXXLFXXXDIVVXXDLTXXWDVDLNGKVNXXXXXCGXSFHRFDKYLNFSN 180
FYLP ++P L + D+VV DL W VD+ VN C F R+ KYLNFS
Sbjct: 355 FYLPEMFPALRRVVLLEDDVVVQRDLAGLWRVDMGANVNAALHTCFGGFRRYGKYLNFSE 176
Query: 181 PHIARNFDPNACGWAYGMNIFDLREWKKKDITGIYHKWQNM 303
P + +F AC W+YG+N+FDL+ W+++ T +H++ M
Sbjct: 175 PVVQESFSHRACAWSYGVNVFDLQGWRREQCTQQFHRFMEM 53
>gb|AC169370.3| Sorghum bicolor clone SB_BBc0011I20, WORKING DRAFT SEQUENCE, 9
unordered pieces
Length = 143922
Score = 90.0 bits (190), Expect(3) = 1e-023
Identities = 33/78 (42%), Positives = 48/78 (61%)
Frame = +1 / -1
Query: 337 LPPGLLTFYKLTHPLDKSWHVLGLGYNPSIDRSEIDNAAVVHYNGNMKPWLELAMTKYRP 516
LP LL F L +PL+ SW GLG++ I +I+ AA +HYNG MKPWL+L + Y+
Sbjct: 66426 LPASLLAFQDLVYPLEDSWVQSGLGHDYGISHVDIEKAATLHYNGVMKPWLDLGIHDYKS 66247
Query: 517 YWTKYIKYDHPYIRGCNL 570
YW +Y+ ++ CN+
Sbjct: 66246 YWREYMTNGEKFMTECNI 66193
Score = 40.9 bits (83), Expect(3) = 1e-023
Identities = 16/56 (28%), Positives = 26/56 (46%)
Frame = +1 / -3
Query: 1 FYLPXVYPKLXXXLFXXXDIVVXXDLTXXWDVDLNGKVNXXXXXCGXSFHRFDKYL 168
F LP + P L + D++V DL+ W++D+ GKV C + Y+
Sbjct: 66910 FLLPDLLPSLNRVVVLDDDLIVQKDLSSLWNLDMGGKVIGAVQFCEVRLGQLKPYM 66743
Score = 37.3 bits (75), Expect(3) = 1e-023
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = +1 / -3
Query: 196 NFDPNACGWAYGMNIFDLREWKKKDITGIY 285
N + N+C W G+N+ +L +W+ IT +Y
Sbjct: 66733 NVNANSCVWLSGLNVVELDKWRDMGITSLY 66644
>gb|CW068742.1|CW068742 104_317_10525284_1_30096 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10525284, DNA
sequence
Length = 432
Score = 110 bits (234), Expect = 4e-023
Identities = 41/82 (50%), Positives = 55/82 (67%)
Frame = +1 / -2
Query: 1 FYLPXVYPKLXXXLFXXXDIVVXXDLTXXWDVDLNGKVNXXXXXCGXSFHRFDKYLNFSN 180
FY+P +YP+L +F DIVV DL+ + ++LNG V C +FHRF KYLN S+
Sbjct: 248 FYIPEIYPELQKVVFLDDDIVVQKDLSELFTINLNGNVMGAVETCMETFHRFHKYLNHSH 69
Query: 181 PHIARNFDPNACGWAYGMNIFD 246
P I +FDP+ACGWA+GMN+ D
Sbjct: 68 PLIRAHFDPDACGWAFGMNVLD 3
>gb|CF770909.1|CF770909 DSBF1_11_D05.g1_A010 Drought-stressed before flowering Sorghum
bicolor cDNA clone DSBF1_11_D05_A010 3', mRNA sequence
Length = 635
Score = 109 bits (233), Expect = 6e-023
Identities = 36/75 (48%), Positives = 50/75 (66%)
Frame = +1 / +1
Query: 352 LTFYKLTHPLDKSWHVLGLGYNPSIDRSEIDNAAVVHYNGNMKPWLELAMTKYRPYWTKY 531
+ F HP+D SWH+LGLGY D S ++ AAV+HYNG KPWLE+ +P+WTKY
Sbjct: 1 IAFKGHVHPIDPSWHLLGLGYQEKTDISSVEQAAVIHYNGQSKPWLEIGFKHLQPFWTKY 180
Query: 532 IKYDHPYIRGCNLSE 576
+ Y + +IR C++ E
Sbjct: 181 VNYSNEFIRNCHIME 225
>gb|CW354779.1|CW354779 fsbb001f019c05k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f019c05, DNA
sequence
Length = 265
Score = 109 bits (232), Expect = 8e-023
Identities = 37/52 (71%), Positives = 45/52 (86%)
Frame = +1 / -1
Query: 133 CGXSFHRFDKYLNFSNPHIARNFDPNACGWAYGMNIFDLREWKKKDITGIYH 288
CG +FHRFD+YLNFSNP IA+ FD ACGWAYGMN+FDL EW+K++IT +YH
Sbjct: 253 CGATFHRFDRYLNFSNPLIAKQFDQRACGWAYGMNMFDLSEWRKQNITDVYH 98
>gb|CF769429.1|CF769429 DSBF1_1_C05.g1_A010 Drought-stressed before flowering Sorghum
bicolor cDNA clone DSBF1_1_C05_A010 3', mRNA sequence
Length = 634
Score = 109 bits (232), Expect = 8e-023
Identities = 35/68 (51%), Positives = 48/68 (70%)
Frame = +1 / +3
Query: 373 HPLDKSWHVLGLGYNPSIDRSEIDNAAVVHYNGNMKPWLELAMTKYRPYWTKYIKYDHPY 552
HP+D SWH+LGLGY D S ++ AAV+HYNG KPWLE+ +P+WTKY+ Y + +
Sbjct: 21 HPIDPSWHLLGLGYQEKTDISSVEQAAVIHYNGQSKPWLEIGFKHLQPFWTKYVNYSNEF 200
Query: 553 IRGCNLSE 576
IR C++ E
Sbjct: 201 IRNCHIME 224
>gb|CD210962.1|CD210962 HS1_58_B05.b1_A012 Heat-shocked seedlings Sorghum bicolor cDNA
clone HS1_58_B05_A012 3', mRNA sequence
Length = 733
Score = 86.8 bits (183), Expect(2) = 3e-022
Identities = 33/89 (37%), Positives = 52/89 (58%)
Frame = +1 / +1
Query: 307 EDRVLWKLGTLPPGLLTFYKLTHPLDKSWHVLGLGYNPSIDRSEIDNAAVVHYNGNMKPW 486
+D + + P LL+F L +PLD+ + GLGY+ ID +A +HYNGNMKPW
Sbjct: 115 KDELSLRAAAFPLSLLSFQHLIYPLDEKLTLAGLGYDYGIDEVVARRSASLHYNGNMKPW 294
Query: 487 LELAMTKYRPYWTKYIKYDHPYIRGCNLS 573
LEL + Y+ YW +++ ++ CN++
Sbjct: 295 LELGIPDYKKYWKRFLVRGDRFMDECNVN 381
Score = 40.0 bits (81), Expect(2) = 3e-022
Identities = 11/29 (37%), Positives = 20/29 (68%)
Frame = +1 / +1
Query: 199 FDPNACGWAYGMNIFDLREWKKKDITGIY 285
+DPN C W G+N+ +L +W++ ++T Y
Sbjct: 1 YDPNLCAWMSGVNLINLDKWREHNVTENY 87
>gb|CW267133.1|CW267133 104_737_11400535_116_35289_028 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11400535, DNA
sequence
Length = 646
Score = 105 bits (225), Expect = 8e-022
Identities = 33/68 (48%), Positives = 47/68 (69%)
Frame = +1 / +2
Query: 373 HPLDKSWHVLGLGYNPSIDRSEIDNAAVVHYNGNMKPWLELAMTKYRPYWTKYIKYDHPY 552
HP+D SWH+L LGY D S ++ AA++HYNG KPWLE+ +P+WTKY+ Y + +
Sbjct: 17 HPIDPSWHLLSLGYQEKTDISSVEQAAIIHYNGQSKPWLEIGFKHLQPFWTKYVNYSNEF 196
Query: 553 IRGCNLSE 576
IR C++ E
Sbjct: 197 IRNCHIME 220
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 1,159,540,855
Number of Sequences: 832831
Number of extensions: 16954555
Number of successful extensions: 85643
Number of sequences better than 1.0e-020: 48
length of database: 163,786,556
effective HSP length: 55
effective length of database: 117,980,851
effective search space used: 31500887217
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)