TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= QAS2h09.yg.3.5
(1992 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CN139844.1|CN139844 OX1_24_B03.g1_A002 Oxidatively-stres... 426 e-136
gb|AW672062.1|AW672062 LG1_354_G05.b1_A002 Light Grown 1 (L... 450 e-128
gb|CX608930.1|CX608930 ANR1_9_D06.g1_A002 Anaerobic roots S... 415 e-114
gb|BI098957.1|BI098957 IP1_35_D12.b1_A002 Immature pannicle... 409 e-113
gb|CD226268.1|CD226268 CCC1_44_D06.g1_A007 Callus culture/c... 385 e-105
gb|CW448607.1|CW448607 fsbb001f182e24k0 Sorghum methylation... 174 e-103
gb|BF655998.1|BF655998 FM1_42_F08.b1_A003 Floral-Induced Me... 374 e-102
gb|BI075197.1|BI075197 IP1_17_C12.b1_A002 Immature pannicle... 174 e-100
gb|CW036402.1|CW036402 104_267_10503738_114_30374 Sorghum m... 337 9e-098
gb|CL151120.1|CL151120 104_333_10779023_116_31360_191 Sorgh... 311 5e-092
gb|CW103828.1|CW103828 104_472_11012098_148_34437_037 Sorgh... 325 1e-087
gb|BI074901.1|BI074901 IP1_17_C12.g1_A002 Immature pannicle... 140 4e-085
gb|CW448606.1|CW448606 fsbb001f182e24f0 Sorghum methylation... 191 4e-080
gb|CD232318.1|CD232318 SS1_39_E09.g1_A012 Salt-stressed see... 286 6e-076
gb|CN149937.1|CN149937 WOUND1_65_G12.g1_A002 Wounded leaves... 285 2e-075
gb|CW251033.1|CW251033 104_713_11223710_148_35059_055 Sorgh... 196 2e-075
gb|CX611279.1|CX611279 ANR1_23_E12.g1_A002 Anaerobic roots ... 283 5e-075
gb|CW096980.1|CW096980 104_462_11002200_148_34353_082 Sorgh... 189 1e-073
gb|BG050179.1|BG050179 FM1_67_F11.b1_A003 Floral-Induced Me... 197 4e-073
gb|BI098805.1|BI098805 IP1_33_D12.b1_A002 Immature pannicle... 275 2e-072
gb|CW096979.1|CW096979 104_462_11002200_116_34349_082 Sorgh... 231 1e-071
gb|CD235285.1|CD235285 SS1_28_H11.g1_A012 Salt-stressed see... 266 7e-070
gb|CX616786.1|CX616786 GABR1_29_H12.g1_A002 GA- or brassino... 266 7e-070
gb|BI098521.1|BI098521 IP1_33_D12.g1_A002 Immature pannicle... 140 2e-069
gb|BF655926.1|BF655926 FM1_42_F08.g1_A003 Floral-Induced Me... 142 7e-067
gb|CD213280.1|CD213280 HS1_29_B09.g1_A012 Heat-shocked seed... 256 1e-066
gb|AW563989.1|AW563989 LG1_281_D10.b1_A002 Light Grown 1 (L... 245 2e-063
gb|CW454158.1|CW454158 fsbb001f198h17k0 Sorghum methylation... 133 3e-063
gb|CD462462.1|CD462462 ETH1_37_D07.g1_A002 Ethylene-treated... 128 6e-063
gb|CW119828.1|CW119828 104_497_11108982_116_34641_031 Sorgh... 126 6e-063
gb|CX611203.1|CX611203 ANR1_23_E12.b1_A002 Anaerobic roots ... 105 1e-062
gb|CN138550.1|CN138550 OX1_64_A08.g1_A002 Oxidatively-stres... 236 9e-061
gb|CW251032.1|CW251032 104_713_11223710_116_35063_055 Sorgh... 105 9e-061
gb|CD209759.1|CD209759 HS1_54_C12.g1_A012 Heat-shocked seed... 234 4e-060
gb|CN148942.1|CN148942 WOUND1_59_F10.g1_A002 Wounded leaves... 234 4e-060
gb|CX611399.1|CX611399 ANR1_24_A06.g1_A002 Anaerobic roots ... 234 4e-060
gb|CW435563.1|CW435563 fsbb001f151m11k0 Sorghum methylation... 150 1e-058
gb|CD210313.1|CD210313 HS1_50_F06.g1_A012 Heat-shocked seed... 228 3e-058
gb|CD428126.1|CD428126 ETH1_32_E12.g1_A002 Ethylene-treated... 228 3e-058
gb|CN138063.1|CN138063 OX1_61_A11.g1_A002 Oxidatively-stres... 228 3e-058
gb|CD428558.1|CD428558 ETH1_27_H11.g1_A002 Ethylene-treated... 168 6e-058
gb|CF074455.1|CF074455 FE1_24_A11.g1_A002 Iron-deficient se... 133 1e-056
gb|CX611811.1|CX611811 ANR1_26_H01.g1_A002 Anaerobic roots ... 222 1e-056
gb|CX608115.1|CX608115 ANR1_32_F03.g1_A002 Anaerobic roots ... 221 3e-056
gb|CW491260.1|CW491260 fsbb001f281a22f0 Sorghum methylation... 158 1e-054
gb|CW215467.1|CW215467 104_647_11194554_116_37464_067 Sorgh... 170 3e-054
gb|CW258813.1|CW258813 104_724_11228081_116_35162_065 Sorgh... 156 2e-053
gb|CW077690.1|CW077690 104_384_10893622_116_31916_070 Sorgh... 156 2e-053
gb|CW099615.1|CW099615 104_466_11003648_116_34383_022 Sorgh... 101 2e-053
gb|CW087483.1|CW087483 104_432_10947659_114_32550_046 Sorgh... 101 2e-053
gb|CD212966.1|CD212966 HS1_17_F02.g1_A012 Heat-shocked seed... 211 2e-053
gb|CW163341.1|CW163341 104_571_11151411_116_36453_016 Sorgh... 158 3e-053
gb|BI098670.1|BI098670 IP1_35_D12.g1_A002 Immature pannicle... 124 5e-053
gb|AF474131.1| Sorghum bicolor typical P-type R2R3 Myb prot... 162 9e-053
gb|CW354820.1|CW354820 fsbb001f019d03k0 Sorghum methylation... 209 2e-052
gb|BE361115.1|BE361115 DG1_70_A01.b1_A002 Dark Grown 1 (DG1... 208 2e-052
gb|CW454157.1|CW454157 fsbb001f198h17f0 Sorghum methylation... 147 2e-052
gb|BI098588.1|BI098588 IP1_34_D01.g1_A002 Immature pannicle... 117 2e-051
gb|CD214131.1|CD214131 HS1_70_D11.g1_A012 Heat-shocked seed... 204 4e-051
gb|CF429105.1|CF429105 PH1_19_F05.g1_A002 Phosphorous-defic... 204 4e-051
gb|CN149909.1|CN149909 WOUND1_65_D11.g1_A002 Wounded leaves... 204 4e-051
gb|AF474133.1| Sorghum bicolor typical P-type R2R3 Myb prot... 160 7e-051
gb|AW563849.1|AW563849 LG1_272_G12.b1_A002 Light Grown 1 (L... 202 1e-050
gb|CX610466.1|CX610466 ANR1_18_H10.g1_A002 Anaerobic roots ... 202 1e-050
gb|CW317106.1|CW317106 104_808_11473239_116_35853_052 Sorgh... 155 1e-050
gb|CW212940.1|CW212940 104_644_11191287_116_37030_060 Sorgh... 159 2e-050
gb|AF474130.1| Sorghum bicolor typical P-type R2R3 Myb prot... 158 2e-050
gb|CD224966.1|CD224966 CCC1_37_B09.g1_A007 Callus culture/c... 201 3e-050
gb|CD429271.1|CD429271 ETH1_3_B10.g1_A002 Ethylene-treated ... 201 3e-050
gb|CW419529.1|CW419529 fsbb001f124g17k0 Sorghum methylation... 147 4e-050
gb|AF474126.1| Sorghum bicolor typical P-type R2R3 Myb prot... 158 5e-050
gb|CD429496.1|CD429496 ETH1_4_D02.g1_A002 Ethylene-treated ... 199 1e-049
gb|AF470060.1| Sorghum bicolor P-type R2R3 Myb protein (Myb... 156 2e-049
gb|CW414653.1|CW414653 fsbb001f114g17f0 Sorghum methylation... 136 5e-048
gb|CW340501.1|CW340501 104_841_11485831_148_36147_022 Sorgh... 156 1e-047
gb|DN551956.1|DN551956 pSPR-RT-MR-H2_G12_S202 pSPR Sorghum ... 120 8e-047
gb|CD210026.1|CD210026 HS1_56_E12.g1_A012 Heat-shocked seed... 131 1e-046
gb|CW168642.1|CW168642 104_578_11154251_148_36600_042 Sorgh... 133 2e-046
gb|CW057886.1|CW057886 104_300_10518454_1_30040 Sorghum met... 154 3e-046
gb|BI098875.1|BI098875 IP1_34_D01.b1_A002 Immature pannicle... 186 9e-046
gb|CW257497.1|CW257497 104_723_11227368_116_35159_096 Sorgh... 153 3e-045
gb|CL150110.1|CL150110 104_331_10778290_114_31355_226 Sorgh... 101 5e-044
gb|AF474125.1| Sorghum bicolor typical A-type R2R3 Myb prot... 180 8e-044
gb|BZ330053.1|BZ330053 hv89f07.g1 WGS-SbicolorF (JM107 adap... 100 1e-043
gb|CW202832.1|CW202832 104_629_11185306_116_36915_043 Sorgh... 104 2e-043
gb|CW314050.1|CW314050 104_804_11471615_148_35798_088 Sorgh... 177 5e-043
gb|CN124270.1|CN124270 RHOH1_3_E09.g1_A002 Acid- and alkali... 81 1e-042
gb|BZ336394.1|BZ336394 hz34a02.g1 WGS-SbicolorF (JM107 adap... 100 1e-042
gb|BG273523.1|BG273523 OV2_26_G06.b1_A002 Ovary 2 (OV2) Sor... 174 4e-042
gb|CN124196.1|CN124196 RHOH1_3_E09.b1_A002 Acid- and alkali... 105 9e-042
gb|CW496466.1|CW496466 fsbb001f288l19f0 Sorghum methylation... 133 3e-041
gb|AF470066.1| Sorghum bicolor P-type R2R3 Myb protein (Myb... 99 4e-041
gb|CW114914.1|CW114914 104_489_11106252_148_34566_034 Sorgh... 156 5e-041
gb|CW041910.1|CW041910 104_275_10506824_115_30285 Sorghum m... 170 9e-041
gb|CW269199.1|CW269199 104_740_11401724_116_36231_076 Sorgh... 170 9e-041
gb|BE356993.1|BE356993 DG1_146_C10.b1_A002 Dark Grown 1 (DG... 168 3e-040
gb|BE357013.1|BE357013 DG1_146_C11.b1_A002 Dark Grown 1 (DG... 168 3e-040
gb|CD232235.1|CD232235 SS1_39_E09.b1_A012 Salt-stressed see... 105 5e-040
gb|CX617423.1|CX617423 GABR1_33_D11.g1_A002 GA- or brassino... 167 6e-040
gb|CW124122.1|CW124122 104_503_11111597_148_34693_019 Sorgh... 127 7e-040
gb|BG560270.1|BG560270 RHIZ2_72_B10.b1_A003 Rhizome2 (RHIZ2... 135 9e-040
gb|CW180395.1|CW180395 104_594_11160615_148_36632_050 Sorgh... 101 3e-039
gb|AW564773.1|AW564773 LG1_301_A07.b1_A002 Light Grown 1 (L... 132 4e-039
gb|BG159081.1|BG159081 RHIZ2_17_F03.b1_A003 Rhizome2 (RHIZ2... 164 5e-039
gb|AF470058.1| Sorghum bicolor P-type R2R3 Myb protein (Myb... 93 1e-038
gb|CW136796.1|CW136796 104_521_11118569_116_34846_065 Sorgh... 111 1e-038
gb|CW148312.1|CW148312 104_542_11140354_116_35003_033 Sorgh... 95 2e-038
gb|CW140879.1|CW140879 104_531_11136014_116_34925_053 Sorgh... 95 2e-038
gb|CW136797.1|CW136797 104_521_11118569_148_34842_065 Sorgh... 162 2e-038
gb|CW396674.1|CW396674 fsbb001f085d16f0 Sorghum methylation... 162 2e-038
gb|CW378977.1|CW378977 fsbb001f057p23k0 Sorghum methylation... 99 2e-038
gb|CW364381.1|CW364381 fsbb001f036g09k0 Sorghum methylation... 99 2e-038
gb|CW323228.1|CW323228 104_817_11476519_148_35956_026 Sorgh... 161 3e-038
gb|CW331265.1|CW331265 104_828_11480814_148_36025_023 Sorgh... 161 3e-038
gb|CW414654.1|CW414654 fsbb001f114g17k0 Sorghum methylation... 158 3e-038
gb|CW131835.1|CW131835 104_514_11115886_116_34787_081 Sorgh... 95 4e-038
gb|CW257715.1|CW257715 104_723_11227485_116_35160_091 Sorgh... 99 5e-038
gb|CW036403.1|CW036403 104_267_10503738_115_30375 Sorghum m... 105 1e-037
gb|CN140754.1|CN140754 OX1_46_F09.g1_A002 Oxidatively-stres... 128 1e-037
gb|CX608850.1|CX608850 ANR1_9_D06.b1_A002 Anaerobic roots S... 105 1e-037
gb|CW344541.1|CW344541 104_847_11488007_148_36198_092 Sorgh... 95 2e-037
gb|CW166340.1|CW166340 104_575_11153002_116_36764_045 Sorgh... 76 3e-037
gb|CW261147.1|CW261147 104_728_11229348_148_35173_046 Sorgh... 156 9e-037
gb|CW288510.1|CW288510 104_767_11411990_148_35540_063 Sorgh... 156 9e-037
gb|CW316411.1|CW316411 104_807_11472880_148_35845_050 Sorgh... 156 9e-037
gb|CW440051.1|CW440051 fsbb001f158i03k0 Sorghum methylation... 156 9e-037
gb|CW440141.1|CW440141 fsbb001f158k07k0 Sorghum methylation... 156 9e-037
gb|AY860968.1| Sorghum bicolor yellow seed1 (y1) gene, y1-r... 88 1e-036
gb|CW171329.1|CW171329 104_582_11155681_116_36525_013 Sorgh... 155 2e-036
gb|AF474132.1| Sorghum bicolor typical P-type R2R3 Myb prot... 129 3e-036
gb|CW029941.1|CW029941 104_257_10499963_114_30401 Sorghum m... 154 4e-036
gb|CW029942.1|CW029942 104_257_10499964_114_30401 Sorghum m... 154 4e-036
gb|CW073845.1|CW073845 104_340_10781847_116_31470_327 Sorgh... 154 4e-036
gb|CW331264.1|CW331264 104_828_11480814_116_36026_023 Sorgh... 154 4e-036
gb|CW458259.1|CW458259 fsbb001f204h09f0 Sorghum methylation... 154 4e-036
gb|CW037176.1|CW037176 104_268_10504189_115_30382 Sorghum m... 154 6e-036
gb|CW047730.1|CW047730 104_285_10512861_115_30217 Sorghum m... 154 6e-036
gb|CW057979.1|CW057979 104_300_10518502_1_30028 Sorghum met... 154 6e-036
gb|CW415564.1|CW415564 fsbb001f115l16f0 Sorghum methylation... 100 8e-036
gb|CW186390.1|CW186390 104_604_11166541_148_36706_057 Sorgh... 153 1e-035
gb|CW395581.1|CW395581 fsbb001f083k18f0 Sorghum methylation... 153 1e-035
gb|CW161765.1|CW161765 104_568_11150585_148_36434_067 Sorgh... 152 1e-035
gb|AF470063.1| Sorghum bicolor P-type R2R3 Myb protein (Myb... 152 1e-035
gb|CW044723.1|CW044723 104_280_10509121_114_30262 Sorghum m... 76 2e-035
gb|CW440966.1|CW440966 fsbb001f159n24k0 Sorghum methylation... 89 3e-035
gb|CW034132.1|CW034132 104_264_10502369_115_30380 Sorghum m... 89 3e-035
gb|CX617094.1|CX617094 GABR1_31_D12.g1_A002 GA- or brassino... 151 4e-035
gb|CW215123.1|CW215123 104_647_11194377_116_37161_041 Sorgh... 150 5e-035
gb|CX615050.1|CX615050 GABR1_17_G10.g1_A002 GA- or brassino... 150 5e-035
gb|CW042795.1|CW042795 104_276_10507284_116_30487 Sorghum m... 150 7e-035
gb|CW450438.1|CW450438 fsbb001f189b06k0 Sorghum methylation... 149 1e-034
gb|BG947473.1|BG947473 IP1_4_H01.b1_A002 Immature pannicle ... 90 1e-034
gb|CW283140.1|CW283140 104_759_11409088_148_35474_056 Sorgh... 86 1e-034
gb|AF474129.1| Sorghum bicolor typical P-type R2R3 Myb prot... 127 2e-034
gb|CW364997.1|CW364997 fsbb001f037f01f0 Sorghum methylation... 90 2e-034
gb|CW298181.1|CW298181 104_780_11462443_148_35652_070 Sorgh... 90 2e-034
gb|CW037895.1|CW037895 104_269_10504606_114_30383 Sorghum m... 124 2e-034
gb|CW128216.1|CW128216 104_509_11113884_148_34749_036 Sorgh... 148 3e-034
gb|CW433017.1|CW433017 fsbb001f148a21k0 Sorghum methylation... 92 3e-034
gb|CW265473.1|CW265473 104_734_11231898_148_35264_067 Sorgh... 98 6e-034
gb|CW209992.1|CW209992 104_640_11189556_116_37000_044 Sorgh... 92 7e-034
gb|CW501261.1|CW501261 fsbb001f296p22k0 Sorghum methylation... 88 7e-034
gb|AF470071.1| Sorghum bicolor P-type R2R3 Myb protein (Myb... 92 7e-034
gb|CW369035.1|CW369035 fsbb001f043e07k0 Sorghum methylation... 146 9e-034
gb|CW392901.1|CW392901 fsbb001f079l18k0 Sorghum methylation... 146 9e-034
gb|AW671674.1|AW671674 LG1_349_F08.b1_A002 Light Grown 1 (L... 146 9e-034
gb|AY363161.1| Sorghum bicolor P-type R2R3 Myb protein (Myb... 79 1e-033
gb|CW221956.1|CW221956 104_657_11202124_116_37451_012 Sorgh... 118 2e-033
gb|CF074366.1|CF074366 FE1_24_A11.b1_A002 Iron-deficient se... 105 6e-033
gb|CW368034.1|CW368034 fsbb001f041m19f0 Sorghum methylation... 116 6e-033
gb|AF474127.1| Sorghum bicolor typical P-type R2R3 Myb prot... 79 1e-032
gb|CD226168.1|CD226168 CCC1_44_D06.b1_A007 Callus culture/c... 104 1e-032
gb|CW480519.1|CW480519 fsbb001f239k04f0 Sorghum methylation... 100 2e-032
gb|CX613908.1|CX613908 GABR1_10_H03.g1_A002 GA- or brassino... 127 3e-032
gb|CW487349.1|CW487349 fsbb001f253c15k0 Sorghum methylation... 100 3e-032
gb|CW300014.1|CW300014 104_783_11463423_148_36246_060 Sorgh... 100 3e-032
gb|CW491261.1|CW491261 fsbb001f281a22k0 Sorghum methylation... 140 6e-032
gb|CD213181.1|CD213181 HS1_29_B09.b1_A012 Heat-shocked seed... 109 7e-032
gb|CD232590.1|CD232590 SS1_46_D12.g1_A012 Salt-stressed see... 125 8e-032
gb|CW041655.1|CW041655 104_275_10506672_114_30284 Sorghum m... 80 1e-031
gb|CW364998.1|CW364998 fsbb001f037f01k0 Sorghum methylation... 90 1e-031
gb|CW128322.1|CW128322 104_509_11113940_116_34745_066 Sorgh... 99 2e-031
gb|CW172247.1|CW172247 104_583_11156182_148_36535_089 Sorgh... 119 2e-031
gb|CN129844.1|CN129844 RHOH1_37_F10.g1_A002 Acid- and alkal... 124 2e-031
gb|CL179208.1|CL179208 104_388_10895151_148_31909_063 Sorgh... 92 2e-031
gb|CX622870.1|CX622870 GABR1_66_A07.g1_A002 GA- or brassino... 124 2e-031
gb|CW308697.1|CW308697 104_797_11468806_116_35720_091 Sorgh... 95 4e-031
gb|CD233716.1|CD233716 SS1_3_E01.g1_A012 Salt-stressed seed... 120 7e-031
gb|CW493828.1|CW493828 fsbb001f284m17k0 Sorghum methylation... 116 1e-030
gb|CL173222.1|CL173222 104_376_10890727_116_31795_247 Sorgh... 135 3e-030
gb|BE354970.1|BE354970 DG1_10_C10.b1_A002 Dark Grown 1 (DG1... 135 3e-030
gb|CN135779.1|CN135779 OX1_38_H11.g1_A002 Oxidatively-stres... 118 4e-030
gb|CW374733.1|CW374733 fsbb001f051l23f0 Sorghum methylation... 119 7e-030
gb|CN137174.1|CN137174 OX1_55_D05.g1_A002 Oxidatively-stres... 117 7e-030
gb|AF474128.1| Sorghum bicolor typical P-type R2R3 Myb prot... 77 8e-030
gb|CW404241.1|CW404241 fsbb001f096e20f0 Sorghum methylation... 117 9e-030
gb|CW266762.1|CW266762 104_736_11232607_116_35283_022 Sorgh... 133 1e-029
gb|CW266763.1|CW266763 104_736_11232607_148_35287_022 Sorgh... 133 1e-029
gb|CW113883.1|CW113883 104_488_11105692_116_34560_010 Sorgh... 84 2e-029
gb|CW363913.1|CW363913 fsbb001f035l18f0 Sorghum methylation... 78 3e-029
gb|CW258488.1|CW258488 104_724_11227903_116_35164_026 Sorgh... 78 3e-029
gb|BZ424048.1|BZ424048 id56d03.g1 WGS-SbicolorF (DH5a methy... 84 3e-029
gb|CW157627.1|CW157627 104_561_11147625_148_36388_045 Sorgh... 87 6e-029
gb|CW028250.1|CW028250 104_255_10498984_114_30394 Sorghum m... 84 7e-029
gb|CN129081.1|CN129081 RHOH1_33_H11.b3_A002 Acid- and alkal... 130 9e-029
gb|CN129172.1|CN129172 RHOH1_33_H11.g1_A002 Acid- and alkal... 130 9e-029
gb|CF430007.1|CF430007 PH1_25_C07.g1_A002 Phosphorous-defic... 122 1e-028
gb|CN126656.1|CN126656 RHOH1_18_A02.g1_A002 Acid- and alkal... 122 1e-028
gb|CN141027.1|CN141027 OX1_48_H05.g1_A002 Oxidatively-stres... 122 1e-028
gb|CW247980.1|CW247980 104_709_11222049_148_35027_045 Sorgh... 92 1e-028
gb|CN128796.1|CN128796 RHOH1_31_D08.g1_A002 Acid- and alkal... 122 1e-028
gb|BE357555.1|BE357555 DG1_21_H10.b1_A002 Dark Grown 1 (DG1... 122 1e-028
gb|BE357751.1|BE357751 DG1_22_H09.b1_A002 Dark Grown 1 (DG1... 122 1e-028
gb|CW080152.1|CW080152 104_407_10905722_116_32482_005 Sorgh... 85 3e-028
gb|CX612627.1|CX612627 GABR1_3_C04.g1_A002 GA- or brassinol... 116 4e-028
gb|CX613554.1|CX613554 GABR1_8_G08.g1_A002 GA- or brassinol... 116 4e-028
gb|CW032214.1|CW032214 104_261_10501251_114_30363 Sorghum m... 127 4e-028
gb|CW218568.1|CW218568 104_652_11196258_148_37530_075 Sorgh... 91 6e-028
gb|CW172958.1|CW172958 104_584_11156580_148_36547_042 Sorgh... 127 6e-028
gb|CW492388.1|CW492388 fsbb001f282k10f0 Sorghum methylation... 127 6e-028
gb|CW492389.1|CW492389 fsbb001f282k10k0 Sorghum methylation... 127 6e-028
gb|CW419931.1|CW419931 fsbb001f126a07k0 Sorghum methylation... 105 7e-028
gb|CW203051.1|CW203051 104_629_11185423_148_36910_024 Sorgh... 105 7e-028
gb|CW347401.1|CW347401 fsbb001f007e18k0 Sorghum methylation... 105 7e-028
gb|CW176930.1|CW176930 104_590_11158749_116_36594_095 Sorgh... 105 7e-028
gb|CW219776.1|CW219776 104_654_11196977_148_37146_077 Sorgh... 105 7e-028
gb|CW347400.1|CW347400 fsbb001f007e18f0 Sorghum methylation... 105 7e-028
gb|CW306377.1|CW306377 104_792_11466808_148_35716_064 Sorgh... 84 2e-027
gb|CW389572.1|CW389572 fsbb001f074n05f0 Sorghum methylation... 84 2e-027
gb|CW316832.1|CW316832 104_808_11473099_148_35857_074 Sorgh... 78 3e-027
gb|CW119829.1|CW119829 104_497_11108982_148_34645_031 Sorgh... 105 3e-027
gb|BG104097.1|BG104097 RHIZ2_40_E04.b1_A003 Rhizome2 (RHIZ2... 125 3e-027
gb|CW180394.1|CW180394 104_594_11160615_116_36636_050 Sorgh... 90 3e-027
gb|CW090149.1|CW090149 104_435_10949116_116_32599_002 Sorgh... 81 3e-027
gb|CW340500.1|CW340500 104_841_11485831_116_36146_022 Sorgh... 124 4e-027
gb|CW034730.1|CW034730 104_265_10502732_114_30378 Sorghum m... 90 4e-027
gb|CW491015.1|CW491015 fsbb001f280l06f0 Sorghum methylation... 124 5e-027
gb|CW150395.1|CW150395 104_549_11143002_148_36305_067 Sorgh... 90 1e-026
gb|CW432605.1|CW432605 fsbb001f147g12k0 Sorghum methylation... 77 2e-026
gb|CD204206.1|CD204206 HS1_4_C12.g1_A012 Heat-shocked seedl... 114 2e-026
gb|CW168224.1|CW168224 104_577_11154029_148_36496_019 Sorgh... 84 2e-026
gb|CW170503.1|CW170503 104_580_11155240_116_36516_050 Sorgh... 122 3e-026
gb|CW312811.1|CW312811 104_802_11470957_116_35780_049 Sorgh... 122 3e-026
gb|CD232287.1|CD232287 SS1_39_B06.g1_A012 Salt-stressed see... 122 3e-026
gb|CX606768.1|CX606768 ANR1_4_H01.g1_A002 Anaerobic roots S... 122 3e-026
gb|AF466199.1| Sorghum bicolor putative receptor protein ki... 92 3e-026
gb|CW338065.1|CW338065 104_838_11484544_148_36124_060 Sorgh... 76 3e-026
gb|CW217449.1|CW217449 104_650_11195661_148_37134_085 Sorgh... 76 3e-026
gb|CD227025.1|CD227025 CCC1_49_D01.g1_A007 Callus culture/c... 103 3e-026
gb|CX623122.1|CX623122 GABR1_67_H01.g1_A002 GA- or brassino... 105 3e-026
gb|CW427204.1|CW427204 fsbb001f139b08k0 Sorghum methylation... 89 3e-026
gb|CW402012.1|CW402012 fsbb001f093b23k0 Sorghum methylation... 121 4e-026
gb|BE595825.1|BE595825 PI1_54_E12.b1_A002 Pathogen induced ... 121 4e-026
gb|CN148046.1|CN148046 WOUND1_53_H06.g1_A002 Wounded leaves... 116 4e-026
gb|CF429061.1|CF429061 PH1_19_D11.g1_A002 Phosphorous-defic... 117 5e-026
gb|CL158615.1|CL158615 104_347_10803661_114_31377_253 Sorgh... 77 6e-026
gb|CL155566.1|CL155566 104_341_10782238_116_31472_334 Sorgh... 120 9e-026
gb|BZ344526.1|BZ344526 hp66h07.b1 WGS-SbicolorF (JM107 adap... 119 2e-025
gb|CW189094.1|CW189094 104_610_11173783_148_37098_028 Sorgh... 119 2e-025
gb|CW154933.1|CW154933 104_557_11145867_148_36360_012 Sorgh... 76 2e-025
gb|CW176018.1|CW176018 104_588_11158263_148_36579_052 Sorgh... 118 2e-025
gb|BE594416.1|BE594416 PI1_33_B09.b1_A002 Pathogen induced ... 118 2e-025
gb|BG241945.1|BG241945 RHIZ2_17_F03.b2_A003 Rhizome2 (RHIZ2... 118 2e-025
gb|CW269200.1|CW269200 104_740_11401724_148_36232_076 Sorgh... 74 4e-025
gb|CW332828.1|CW332828 104_830_11481620_148_36038_070 Sorgh... 117 5e-025
gb|AW287632.2|AW287632 LG1_244_E07.b1_A002 Light Grown 1 (L... 117 5e-025
gb|CW389570.1|CW389570 fsbb001f074n04f0 Sorghum methylation... 83 5e-025
gb|CW027512.1|CW027512 104_254_10498559_116_30396 Sorghum m... 117 6e-025
gb|CW143178.1|CW143178 104_534_11137274_116_34951_001 Sorgh... 88 7e-025
gb|CW133943.1|CW133943 104_517_11117035_148_34814_066 Sorgh... 84 9e-025
gb|CN144878.1|CN144878 WOUND1_25_B02.g1_A002 Wounded leaves... 97 9e-025
gb|CN145216.1|CN145216 WOUND1_27_B08.g1_A002 Wounded leaves... 97 9e-025
gb|CX622730.1|CX622730 GABR1_65_D10.g1_A002 GA- or brassino... 97 9e-025
gb|CD429993.1|CD429993 ETH1_16_D05.g1_A002 Ethylene-treated... 97 9e-025
gb|CW190321.1|CW190321 104_611_11174442_116_36752_065 Sorgh... 116 1e-024
gb|CW199735.1|CW199735 104_625_11183670_116_36860_031 Sorgh... 116 1e-024
gb|CX620427.1|CX620427 GABR1_51_F11.g1_A002 GA- or brassino... 96 1e-024
gb|CW268204.1|CW268204 104_738_11401152_148_35300_084 Sorgh... 79 1e-024
gb|CW078375.1|CW078375 104_392_10896644_148_31925_020 Sorgh... 79 1e-024
gb|CW345225.1|CW345225 104_848_11488373_148_36206_027 Sorgh... 116 2e-024
gb|CW377249.1|CW377249 fsbb001f055h19f0 Sorghum methylation... 78 2e-024
gb|CW039028.1|CW039028 104_271_10505257_114_30387 Sorghum m... 78 2e-024
gb|CD219565.1|CD219565 CCC1_57_B10.g1_A007 Callus culture/c... 96 2e-024
gb|CF428820.1|CF428820 PH1_17_E04.g1_A002 Phosphorous-defic... 97 3e-024
gb|CW457158.1|CW457158 fsbb001f202n15f0 Sorghum methylation... 80 4e-024
gb|CW488464.1|CW488464 fsbb001f254o02k0 Sorghum methylation... 95 4e-024
gb|BZ368203.1|BZ368203 id12a02.b1 WGS-SbicolorF (JM107 adap... 84 5e-024
gb|CW347756.1|CW347756 fsbb001f007m23f0 Sorghum methylation... 80 5e-024
gb|CW132119.1|CW132119 104_515_11116041_116_34796_041 Sorgh... 76 6e-024
gb|CD209432.1|CD209432 HS1_42_C05.g1_A012 Heat-shocked seed... 94 8e-024
gb|CW323046.1|CW323046 104_817_11476426_116_35958_045 Sorgh... 76 1e-023
gb|CB927439.1|CB927439 ABA1_25_G04.g1_A012 Abscisic acid-tr... 91 4e-023
gb|AF470061.1| Sorghum bicolor P-type R2R3 Myb protein (Myb... 78 5e-023
gb|CL157022.1|CL157022 104_344_10783261_116_31374_205 Sorgh... 94 5e-023
gb|CW290719.1|CW290719 104_770_11413166_116_35566_061 Sorgh... 94 5e-023
gb|CW103827.1|CW103827 104_472_11012098_116_34433_037 Sorgh... 105 7e-023
gb|CW273831.1|CW273831 104_746_11404109_148_35368_023 Sorgh... 94 1e-022
gb|CX621203.1|CX621203 GABR1_56_E01.g1_A002 GA- or brassino... 93 2e-022
gb|CW035421.1|CW035421 104_266_10503150_114_30376 Sorghum m... 76 2e-022
gb|CW465524.1|CW465524 fsbb001f216f08k0 Sorghum methylation... 72 2e-022
gb|CW065423.1|CW065423 104_312_10523140_114_30135 Sorghum m... 99 3e-022
gb|CW052419.1|CW052419 104_292_10515541_114_30188 Sorghum m... 80 3e-022
gb|CW052420.1|CW052420 104_292_10515541_114_30286 Sorghum m... 80 3e-022
gb|CW219513.1|CW219513 104_653_11196814_116_37144_085 Sorgh... 80 4e-022
gb|CW367823.1|CW367823 fsbb001f041h14k0 Sorghum methylation... 89 4e-022
gb|BZ331621.1|BZ331621 hw10f10.g1 WGS-SbicolorF (JM107 adap... 79 5e-022
gb|CW442236.1|CW442236 fsbb001f161m20k0 Sorghum methylation... 79 6e-022
gb|CW115795.1|CW115795 104_491_11106754_148_34597_045 Sorgh... 80 1e-021
gb|CW189791.1|CW189791 104_611_11174152_148_36751_062 Sorgh... 77 2e-021
gb|CW432617.1|CW432617 fsbb001f147g20k0 Sorghum methylation... 77 2e-021
gb|CW086502.1|CW086502 104_430_10947020_114_33017_074 Sorgh... 84 4e-021
gb|CL153544.1|CL153544 104_338_10780786_114_31369_034 Sorgh... 104 6e-021
gb|CW118976.1|CW118976 104_495_11108502_116_34625_019 Sorgh... 76 6e-021
gb|BF481215.1|BF481215 FM1_17_A03.b1_A003 Floral-Induced Me... 75 8e-021
gb|AF470068.1| Sorghum bicolor P-type R2R3 Myb protein (Myb... 103 9e-021
gb|CW188235.1|CW188235 104_608_11172922_116_36732_047 Sorgh... 68 1e-020
gb|CW198757.1|CW198757 104_623_11183144_148_36842_022 Sorgh... 103 1e-020
gb|CW089038.1|CW089038 104_434_10948471_114_32601_028 Sorgh... 70 1e-020
gb|BG560480.1|BG560480 RHIZ2_74_H08.b1_A003 Rhizome2 (RHIZ2... 101 1e-020
gb|CW408645.1|CW408645 fsbb001f102j23k0 Sorghum methylation... 73 2e-020
gb|CW218707.1|CW218707 104_652_11196333_116_37460_089 Sorgh... 73 2e-020
gb|CW408644.1|CW408644 fsbb001f102j23f0 Sorghum methylation... 73 2e-020
gb|CW172701.1|CW172701 104_584_11156431_148_36546_032 Sorgh... 73 2e-020
gb|CW260485.1|CW260485 104_727_11228990_148_35200_059 Sorgh... 73 2e-020
gb|CW283137.1|CW283137 104_759_11409087_116_35477_056 Sorgh... 89 5e-020
gb|CD429101.1|CD429101 ETH1_2_B09.g1_A002 Ethylene-treated ... 100 6e-020
gb|CD464139.1|CD464139 ETH1_48_H11.g1_A002 Ethylene-treated... 90 7e-020
gb|CX618593.1|CX618593 GABR1_40_B10.g1_A002 GA- or brassino... 84 8e-020
gb|CW403563.1|CW403563 fsbb001f095f12f0 Sorghum methylation... 70 8e-020
gb|CW047422.1|CW047422 104_285_10512719_114_30216 Sorghum m... 65 9e-020
gb|CW047423.1|CW047423 104_285_10512719_114_30218 Sorghum m... 65 9e-020
gb|CW256513.1|CW256513 104_721_11226833_148_35142_069 Sorgh... 100 1e-019
gb|CW366211.1|CW366211 fsbb001f039b18f0 Sorghum methylation... 100 1e-019
gb|CW373042.1|CW373042 fsbb001f049d12k0 Sorghum methylation... 100 1e-019
gb|CW030444.1|CW030444 104_258_10500244_116_30404 Sorghum m... 76 2e-019
gb|CW452055.1|CW452055 fsbb001f192g15f0 Sorghum methylation... 77 2e-019
gb|CW396930.1|CW396930 fsbb001f085j15k0 Sorghum methylation... 99 3e-019
gb|CW217349.1|CW217349 104_650_11195609_116_37133_071 Sorgh... 81 3e-019
gb|CW104933.1|CW104933 104_474_11012672_116_34453_030 Sorgh... 95 4e-019
gb|CW385435.1|CW385435 fsbb001f068o16k0 Sorghum methylation... 65 4e-019
gb|CW203672.1|CW203672 104_631_11186139_148_36907_010 Sorgh... 79 4e-019
gb|AF320112.1|AF320112 Sorghum bicolor Myb1-like protein ge... 67 1e-018
gb|CW493827.1|CW493827 fsbb001f284m17f0 Sorghum methylation... 76 1e-018
gb|BH245539.1|BH245539 pSB0860 S. bicolor BTx623 PstI-diges... 63 2e-018
gb|CW491649.1|CW491649 fsbb001f281j16k0 Sorghum methylation... 67 2e-018
gb|CW086503.1|CW086503 104_430_10947020_116_33020_074 Sorgh... 84 3e-018
gb|CL175352.1|CL175352 104_380_10892386_148_31766_370 Sorgh... 95 4e-018
gb|CW247142.1|CW247142 104_708_11221636_116_35018_014 Sorgh... 95 4e-018
gb|CW247143.1|CW247143 104_708_11221636_148_35022_014 Sorgh... 95 4e-018
gb|CW435930.1|CW435930 fsbb001f152f02k0 Sorghum methylation... 95 4e-018
gb|CW217448.1|CW217448 104_650_11195661_116_37133_085 Sorgh... 65 5e-018
gb|CW254409.1|CW254409 104_718_11225650_148_35117_039 Sorgh... 94 7e-018
gb|CX614690.1|CX614690 GABR1_15_E05.g1_A002 GA- or brassino... 94 7e-018
gb|CW207012.1|CW207012 104_636_11187890_148_36968_015 Sorgh... 81 1e-017
gb|CW449861.1|CW449861 fsbb001f188d08k0 Sorghum methylation... 67 1e-017
gb|CW450437.1|CW450437 fsbb001f189b06f0 Sorghum methylation... 93 1e-017
gb|CW087484.1|CW087484 104_432_10947659_116_32554_046 Sorgh... 93 2e-017
gb|CW221823.1|CW221823 104_657_11202052_148_37449_014 Sorgh... 92 2e-017
gb|CW289076.1|CW289076 104_767_11412286_116_35544_083 Sorgh... 92 2e-017
gb|CW397599.1|CW397599 fsbb001f086k10f0 Sorghum methylation... 92 2e-017
gb|AF470059.1| Sorghum bicolor P-type R2R3 Myb protein (Myb... 92 2e-017
gb|CW041497.1|CW041497 104_275_10506578_114_30284 Sorghum m... 92 3e-017
gb|CW177467.1|CW177467 104_590_11159042_148_36592_001 Sorgh... 92 3e-017
gb|CW394683.1|CW394683 fsbb001f082g12f0 Sorghum methylation... 92 3e-017
gb|CW407722.1|CW407722 fsbb001f101f04k0 Sorghum methylation... 92 3e-017
gb|CW083983.1|CW083983 104_426_10945501_116_32438_055 Sorgh... 62 5e-017
gb|CX609627.1|CX609627 ANR1_13_G02.g1_A002 Anaerobic roots ... 85 7e-017
gb|AF470064.1| Sorghum bicolor P-type R2R3 Myb protein (Myb... 63 7e-017
gb|CL180232.1|CL180232 104_389_10895849_116_31908_377 Sorgh... 60 7e-017
gb|BZ345658.1|BZ345658 hs87e07.b1 WGS-SbicolorF (JM107 adap... 90 9e-017
gb|CW051793.1|CW051793 104_292_10515365_114_30189 Sorghum m... 90 1e-016
gb|CW051794.1|CW051794 104_292_10515365_114_30286 Sorghum m... 90 1e-016
gb|CL701488.2|CL701488 SP__Ba0073I14.f SP__Ba Sorghum propi... 90 2e-016
gb|CW257463.1|CW257463 104_723_11227348_116_35159_016 Sorgh... 84 2e-016
gb|BZ330589.1|BZ330589 hv93g02.g1 WGS-SbicolorF (JM107 adap... 78 2e-016
gb|CW273551.1|CW273551 104_746_11403961_148_35368_013 Sorgh... 89 2e-016
gb|CW382098.1|CW382098 fsbb001f063n02k0 Sorghum methylation... 89 2e-016
gb|CW198321.1|CW198321 104_623_11182914_148_36842_079 Sorgh... 81 3e-016
gb|CW026709.1|CW026709 104_252_10498105_116_30520 Sorghum m... 84 3e-016
gb|CW258064.1|CW258064 104_723_11227672_116_35161_052 Sorgh... 84 3e-016
gb|CW423560.1|CW423560 fsbb001f133g23k0 Sorghum methylation... 83 3e-016
gb|CW381430.1|CW381430 fsbb001f062n10f0 Sorghum methylation... 88 4e-016
gb|CX611421.1|CX611421 ANR1_24_C04.g1_A002 Anaerobic roots ... 71 5e-016
gb|CW217711.1|CW217711 104_651_11195798_148_37070_063 Sorgh... 58 5e-016
gb|BZ341015.1|BZ341015 ic42e09.g1 WGS-SbicolorF (JM107 adap... 73 6e-016
gb|CL175915.1|CL175915 104_381_10892781_116_31765_381 Sorgh... 88 6e-016
gb|CW198914.1|CW198914 104_623_11183229_148_37057_083 Sorgh... 88 6e-016
gb|CW396397.1|CW396397 fsbb001f084n04k0 Sorghum methylation... 88 6e-016
gb|CW159747.1|CW159747 104_566_11149518_148_36426_031 Sorgh... 73 6e-016
gb|CW187951.1|CW187951 104_607_11172759_116_36725_056 Sorgh... 87 8e-016
gb|CW054449.1|CW054449 104_295_10516538_114_30186 Sorghum m... 87 1e-015
gb|CW283154.1|CW283154 104_759_11409095_148_35473_088 Sorgh... 87 1e-015
gb|CW380979.1|CW380979 fsbb001f062b21k0 Sorghum methylation... 87 1e-015
gb|CW031368.1|CW031368 104_259_10500767_114_30397 Sorghum m... 86 2e-015
gb|CW174572.1|CW174572 104_586_11157479_116_36558_084 Sorgh... 86 2e-015
gb|CW285913.1|CW285913 104_763_11410597_148_35507_057 Sorgh... 86 2e-015
gb|CW320406.1|CW320406 104_813_11474997_116_35898_089 Sorgh... 85 3e-015
gb|AF470070.1| Sorghum bicolor P-type R2R3 Myb protein (Myb... 60 3e-015
gb|CW372021.1|CW372021 fsbb001f047l20f0 Sorghum methylation... 85 4e-015
gb|CW167237.1|CW167237 104_576_11153492_116_36486_074 Sorgh... 84 7e-015
gb|CW441831.1|CW441831 fsbb001f161c21f0 Sorghum methylation... 84 7e-015
gb|AF470069.1| Sorghum bicolor P-type R2R3 Myb protein (Myb... 58 8e-015
gb|AF470067.1| Sorghum bicolor P-type R2R3 Myb protein (Myb... 56 1e-014
gb|CD228121.1|CD228121 CCC1_5_A11.g1_A007 Callus culture/ce... 84 1e-014
gb|AF470062.1| Sorghum bicolor P-type R2R3 Myb protein (Myb... 56 1e-014
gb|BM325645.1|BM325645 PIC1_47_A12.b1_A002 Pathogen-infecte... 76 1e-014
gb|CW065792.1|CW065792 104_312_10523339_115_30130 Sorghum m... 83 2e-014
gb|CW235373.1|CW235373 104_690_11214948_116_37410_038 Sorgh... 83 2e-014
gb|CW377165.1|CW377165 fsbb001f055f22f0 Sorghum methylation... 83 2e-014
gb|CB927712.1|CB927712 ABA1_27_C05.g1_A012 Abscisic acid-tr... 83 2e-014
gb|CW073577.1|CW073577 104_337_10780449_114_31367_081 Sorgh... 56 2e-014
gb|CX611803.1|CX611803 ANR1_26_G05.g1_A002 Anaerobic roots ... 66 2e-014
gb|CW022995.1|CW022995 104_162_10432178_1_30008 Sorghum met... 82 4e-014
gb|CW264744.1|CW264744 104_733_11231470_148_35252_085 Sorgh... 82 4e-014
gb|CW298180.1|CW298180 104_780_11462443_116_35648_070 Sorgh... 82 4e-014
gb|CW271886.1|CW271886 104_744_11403214_116_36228_093 Sorgh... 81 5e-014
gb|CW072209.1|CW072209 104_325_10592132_114_30536 Sorghum m... 60 6e-014
gb|CW288509.1|CW288509 104_767_11411990_116_35544_063 Sorgh... 77 7e-014
gb|CW115460.1|CW115460 104_490_11106572_116_34593_070 Sorgh... 81 7e-014
gb|CW140880.1|CW140880 104_531_11136014_148_34921_053 Sorgh... 81 7e-014
gb|CW202833.1|CW202833 104_629_11185306_148_37061_043 Sorgh... 81 7e-014
gb|CW170279.1|CW170279 104_580_11155123_116_36509_070 Sorgh... 80 9e-014
gb|CW252598.1|CW252598 104_715_11224599_116_35096_052 Sorgh... 80 9e-014
gb|CW398075.1|CW398075 fsbb001f087f20f0 Sorghum methylation... 80 9e-014
gb|CW482988.1|CW482988 fsbb001f244g08k0 Sorghum methylation... 80 9e-014
gb|BE596225.1|BE596225 PI1_51_B04.b1_A002 Pathogen induced ... 80 9e-014
gb|CL163367.1|CL163367 104_356_10807093_114_31810_229 Sorgh... 80 1e-013
gb|CL163368.1|CL163368 104_356_10807093_116_31811_229 Sorgh... 80 1e-013
gb|CW160735.1|CW160735 104_567_11150041_148_36417_009 Sorgh... 80 1e-013
gb|CW255160.1|CW255160 104_719_11226077_116_35124_021 Sorgh... 80 1e-013
gb|CW422598.1|CW422598 fsbb001f131p11k0 Sorghum methylation... 80 1e-013
gb|CW449377.1|CW449377 fsbb001f183h24f0 Sorghum methylation... 80 1e-013
gb|BG464180.1|BG464180 EM1_70_F02.b1_A002 Embryo 1 (EM1) So... 80 1e-013
gb|CW222966.1|CW222966 104_658_11202654_148_37183_021 Sorgh... 79 2e-013
gb|CW032228.1|CW032228 104_261_10501259_114_30363 Sorghum m... 79 2e-013
gb|CW498594.1|CW498594 fsbb001f291o11k0 Sorghum methylation... 79 2e-013
gb|CW300131.1|CW300131 104_783_11463487_148_36250_026 Sorgh... 58 3e-013
gb|CX618620.1|CX618620 GABR1_40_E04.g1_A002 GA- or brassino... 62 3e-013
gb|CW077001.1|CW077001 104_376_10890727_148_31794_247 Sorgh... 79 3e-013
gb|CW176610.1|CW176610 104_589_11158577_116_36582_069 Sorgh... 79 3e-013
gb|CW232748.1|CW232748 104_685_11212987_148_37366_072 Sorgh... 79 3e-013
gb|CW428734.1|CW428734 fsbb001f141j17k0 Sorghum methylation... 79 3e-013
gb|CW433094.1|CW433094 fsbb001f148c15f0 Sorghum methylation... 79 3e-013
gb|CW258489.1|CW258489 104_724_11227903_148_35168_026 Sorgh... 63 4e-013
gb|CW494840.1|CW494840 fsbb001f286f08f0 Sorghum methylation... 62 4e-013
gb|CL157655.1|CL157655 104_345_10783756_114_31477_316 Sorgh... 78 5e-013
gb|CW157288.1|CW157288 104_560_11147150_116_36382_053 Sorgh... 78 5e-013
gb|CW283724.1|CW283724 104_760_11409398_116_35484_059 Sorgh... 78 5e-013
gb|CW283725.1|CW283725 104_760_11409398_148_35488_059 Sorgh... 78 5e-013
gb|CW212165.1|CW212165 104_643_11190880_148_37020_060 Sorgh... 77 9e-013
gb|CW467397.1|CW467397 fsbb001f219b04k0 Sorghum methylation... 77 9e-013
gb|CW397600.1|CW397600 fsbb001f086k10k0 Sorghum methylation... 77 1e-012
gb|CN129764.1|CN129764 RHOH1_37_F10.b1_A002 Acid- and alkal... 77 1e-012
gb|CD228077.1|CD228077 CCC1_5_D09.g1_A007 Callus culture/ce... 71 1e-012
gb|CW049786.1|CW049786 104_289_10514258_114_30202 Sorghum m... 76 2e-012
gb|AY363140.1| Sorghum bicolor P-type R2R3 Myb protein (Myb... 76 2e-012
gb|CW035440.1|CW035440 104_266_10503160_115_30377 Sorghum m... 59 2e-012
gb|CL181902.1|CL181902 104_393_10897058_116_31922_050 Sorgh... 76 2e-012
gb|CL196552.1|CL196552 104_422_10943134_114_32319_083 Sorgh... 76 2e-012
gb|CL197570.1|CL197570 104_424_10943829_114_32382_085 Sorgh... 76 2e-012
gb|CW027610.1|CW027610 104_254_10498614_114_30395 Sorghum m... 76 2e-012
gb|CW032999.1|CW032999 104_262_10501709_114_30361 Sorghum m... 76 2e-012
gb|CW082118.1|CW082118 104_422_10943134_114_32348_083 Sorgh... 76 2e-012
gb|CW222165.1|CW222165 104_657_11202233_148_37175_071 Sorgh... 76 2e-012
gb|CW295367.1|CW295367 104_776_11460893_116_35618_021 Sorgh... 76 2e-012
gb|CW465523.1|CW465523 fsbb001f216f08f0 Sorghum methylation... 76 2e-012
gb|CW083982.1|CW083982 104_426_10945501_114_32374_055 Sorgh... 46 4e-012
gb|CX622186.1|CX622186 GABR1_62_B06.g2_A002 GA- or brassino... 58 4e-012
gb|CW143179.1|CW143179 104_534_11137274_148_34947_001 Sorgh... 75 4e-012
gb|CL179207.1|CL179207 104_388_10895151_116_31910_063 Sorgh... 74 6e-012
gb|CW419528.1|CW419528 fsbb001f124g17f0 Sorghum methylation... 74 6e-012
gb|CD234587.1|CD234587 SS1_14_B02.g1_A012 Salt-stressed see... 74 6e-012
gb|AF470065.1| Sorghum bicolor A-type R2R3 Myb protein (Myb... 74 6e-012
gb|CL147798.1|CL147798 104_327_10592642_116_31781_150 Sorgh... 74 8e-012
gb|CW448851.1|CW448851 fsbb001f182k18k0 Sorghum methylation... 74 8e-012
gb|CD231330.1|CD231330 SS1_15_G11.g1_A012 Salt-stressed see... 58 9e-012
gb|CW299425.1|CW299425 104_782_11463106_148_35687_041 Sorgh... 73 1e-011
gb|CW441007.1|CW441007 fsbb001f159o22k0 Sorghum methylation... 73 1e-011
gb|AY363141.1| Sorghum bicolor P-type R2R3 Myb protein (Myb... 73 1e-011
gb|CW377224.1|CW377224 fsbb001f055h06k0 Sorghum methylation... 72 3e-011
gb|CW475284.1|CW475284 fsbb001f231j04k0 Sorghum methylation... 72 3e-011
gb|CD222393.1|CD222393 CCC1_21_D01.g1_A007 Callus culture/c... 54 3e-011
gb|CW342048.1|CW342048 104_843_11486659_116_36157_068 Sorgh... 72 4e-011
gb|CW498593.1|CW498593 fsbb001f291o11f0 Sorghum methylation... 72 4e-011
gb|CD232290.1|CD232290 SS1_39_B03.g1_A012 Salt-stressed see... 72 4e-011
gb|CX616231.1|CX616231 GABR1_26_E02.g1_A002 GA- or brassino... 54 6e-011
gb|CD432254.1|CD432254 ETH1_26_A12.g1_A002 Ethylene-treated... 54 6e-011
gb|CW057439.1|CW057439 104_299_10518224_114_30169 Sorghum m... 71 7e-011
gb|CW419930.1|CW419930 fsbb001f126a07f0 Sorghum methylation... 70 1e-010
gb|CW479242.1|CW479242 fsbb001f237j16k0 Sorghum methylation... 70 1e-010
gb|AY363150.1| Sorghum bicolor P-type R2R3 Myb protein (Myb... 50 1e-010
gb|AY363119.1| Sorghum bicolor P-type R2R3 Myb protein (Myb... 51 1e-010
gb|BZ337208.1|BZ337208 ia86a01.g1 WGS-SbicolorF (JM107 adap... 54 1e-010
gb|CW211902.1|CW211902 104_642_11190744_116_37013_082 Sorgh... 54 1e-010
gb|CL197079.1|CL197079 104_423_10943501_116_32331_019 Sorgh... 69 2e-010
gb|CW119268.1|CW119268 104_496_11108672_148_34635_030 Sorgh... 69 2e-010
gb|BG560610.1|BG560610 RHIZ2_59_E07.b1_A003 Rhizome2 (RHIZ2... 69 2e-010
gb|CL194513.1|CL194513 104_419_10941687_116_32298_064 Sorgh... 54 2e-010
gb|CW403062.1|CW403062 fsbb001f094j15f0 Sorghum methylation... 64 2e-010
gb|BZ341008.1|BZ341008 ic42e05.b1 WGS-SbicolorF (JM107 adap... 68 4e-010
>gb|CN139844.1|CN139844 OX1_24_B03.g1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_24_B03_A002 5', mRNA sequence
Length = 745
Score = 426 bits (925), Expect(4) = e-136
Identities = 167/177 (94%), Positives = 172/177 (97%)
Frame = +3 / +3
Query: 228 WSSQVLHCVEMGRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCG 407
WSSQVLHC+EMGRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCG
Sbjct: 213 WSSQVLHCIEMGRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCG 392
Query: 408 KSCRLRWINYLRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNS 587
KSCRLRWINYLRPDLKRGAF+QDEE+LIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNS
Sbjct: 393 KSCRLRWINYLRPDLKRGAFSQDEEELIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNS 572
Query: 588 CIKKKLRQKGIDPNTHKPLTEADHGGAAPTISTERTSGSSDINPSSTGPLGNLSPLL 758
CIKKKLRQKGIDPNTHKPLTEAD GAAPT+STERTSGSSD+NPSS G LGNLS LL
Sbjct: 573 CIKKKLRQKGIDPNTHKPLTEADRSGAAPTVSTERTSGSSDVNPSSAGALGNLSHLL 743
Score = 383 bits (831), Expect(4) = e-126
Identities = 162/177 (91%), Positives = 167/177 (94%)
Frame = -2 / -3
Query: 758 EEGAQVPQRTSA*WVDVAGP*GSLGADGGSCTAVISLSKWLVGVGINAFLPQLLLDARVP 579
EE AQVPQ TS *WVD+AGP*GSLGADGGSC+A ISLSK LVGVGINAFLPQLLLDARVP
Sbjct: 743 EEVAQVPQSTST*WVDIAGP*GSLGADGGSCSAAISLSKGLVGVGINAFLPQLLLDARVP 564
Query: 578 *ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECPSLEVWPQIVYPPQPTTLSAP 399
*ILDLIISPPWQL CNLRPPV EDSVQL+DE+FFVLGECPSLEVWPQIVYPPQPTTLSA
Sbjct: 563 *ILDLIISPPWQLCCNLRPPVSEDSVQLNDELFFVLGECPSLEVWPQIVYPPQPTTLSAS 384
Query: 398 LKPSEFGNRAPAAMAMLCYVIHEFLILLRGPEPLSQLLLVAARMPPHLNAMQNLGAP 228
L+PSEFGNR PAAMAMLCYVIHEFLILLRGPEPLSQLLLVAARMPPHLNAMQNL AP
Sbjct: 383 LEPSEFGNRTPAAMAMLCYVIHEFLILLRGPEPLSQLLLVAARMPPHLNAMQNLRAP 213
Score = 314 bits (680), Expect(3) = 2e-098
Identities = 144/177 (81%), Positives = 145/177 (81%)
Frame = +1 / +1
Query: 229 GAPRFCIALRWGGILAATSRS*ERGSGPLRRMRNS*IT*QSMAMAAGALFPNSLGFKGAE 408
GA RFCIALRWGGILAATS+S*ERGSGPLRRMRNS*IT*QSMAMAAG LFPNSLG K AE
Sbjct: 214 GALRFCIALRWGGILAATSKS*ERGSGPLRRMRNS*IT*QSMAMAAGVLFPNSLGSKDAE 393
Query: 409 RVVG*GG*TI*GQTSREGHSPXXXXXXXXXXXXXXXXXXXXXQRSCQGGLIMRSRIYGTR 588
RVVG*GG*TI*GQTSREGHSP Q SCQGGLIMRSRIYGTR
Sbjct: 394 RVVG*GG*TI*GQTSREGHSPKTKKSSSLSCTLSSETGGLKLQHSCQGGLIMRSRIYGTR 573
Query: 589 ASRRS*GRKALIPTPTSHLLRLITAVQLPPSAPREPQGPATSTHQALVLWGT*APSS 759
ASRRS*GRKALIPTPTS LLRLI A QLPPSAPREPQGPA STHQ LVLWGT*A SS
Sbjct: 574 ASRRS*GRKALIPTPTSPLLRLIAAEQLPPSAPREPQGPAMSTHQVLVLWGT*ATSS 744
Score = 285 bits (617), Expect(5) = 9e-095
Identities = 122/140 (87%), Positives = 122/140 (87%)
Frame = -3 / -1
Query: 760 LRRGLKFPRGPVLDGLMSLDPEVLSVLMVGAAPP*SASVSGLWVLGSMPFCLSFFLMHEF 581
LRR LKFPR P LDGL SLDPEVLSVL VGAAP SASV GLWVLGSMPFCLSFFLMHEF
Sbjct: 745 LRRWLKFPRAPALDGLTSLDPEVLSVLTVGAAPLRSASVRGLWVLGSMPFCLSFFLMHEF 566
Query: 580 HRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANAPLLRSGLR*FIHLSLQLFPH 401
HRFLISLSVLPGSCAAI*DHLFPRTAC SW NAPLLRSGLR*FIHLSLQLFPH
Sbjct: 565 HRFLISLSVLPGSCAAI*DHLFPRTACSSMMSSSSSWENAPLLRSGLR*FIHLSLQLFPH 386
Query: 400 L*SPASLGTELQQPWPCFVM 341
L SPASLGTELQQPWPCFVM
Sbjct: 385 LWSPASLGTELQQPWPCFVM 326
Score = 167 bits (360), Expect(4) = 3e-074
Identities = 73/82 (89%), Positives = 74/82 (90%)
Frame = -1 / -2
Query: 465 MPLS*GLASDSLSTSAYNSFRTFEAQRVWEQSSSSHGHALLCDS*VSHPPQGTRAPFSAS 286
MPLS*GLASDSLSTSAYNSFR F AQRVWEQ+SSSHGHALLCDS*VSHPPQGTRAPFS
Sbjct: 450 MPLS*GLASDSLSTSAYNSFRIFGAQRVWEQNSSSHGHALLCDS*VSHPPQGTRAPFSTF 271
Query: 285 ACSSKNASPSQRNAEPGSSNQT 220
ACSSKNASPSQ NAEP SS T
Sbjct: 270 ACSSKNASPSQCNAEPESSKFT 205
Score = 152 bits (326), Expect(3) = 1e-083
Identities = 65/72 (90%), Positives = 67/72 (93%)
Frame = +2 / +2
Query: 227 LELPGSALR*DGEAFLLLQAEAEKGALVP*GG*ETHESHNKAWPWLLELCSQTRWASKVR 406
LEL GSAL *DGEAFLLLQA+ EKGALVP*GG*ETHESHNKAWPWLLE CSQTRWA K+R
Sbjct: 212 LELSGSALH*DGEAFLLLQAKVEKGALVP*GG*ETHESHNKAWPWLLEFCSQTRWAPKMR 391
Query: 407 KEL*AEVDKLSE 442
KEL*AEVDKLSE
Sbjct: 392 KEL*AEVDKLSE 427
Score = 140 bits (301), Expect(3) = 1e-083
Identities = 64/82 (78%), Positives = 65/82 (79%)
Frame = +2 / +2
Query: 515 EQVVSNCSAAARED***DQESMELVHQEEAEAERH*SQHPQATY*GXXXXXXXXXXXXEN 694
+QVVSNCS AARED***DQESMELVHQEEAEAERH*SQHPQA Y*G EN
Sbjct: 500 KQVVSNCSTAARED***DQESMELVHQEEAEAERH*SQHPQAPY*G*SQRSSSHRQHREN 679
Query: 695 LRVQRHQPIKHWSSGELEPPPQ 760
LRVQR QPIK W SGELEPPPQ
Sbjct: 680 LRVQRCQPIKCWCSGELEPPPQ 745
Score = 102 bits (217), Expect(4) = 3e-074
Identities = 46/74 (62%), Positives = 46/74 (62%)
Frame = -1 / -2
Query: 738 PEDQCLMG*CRWTLRFSRC*WWELHRRDQPQ*VACGCWDQCLXXXXXXXXXXXXXXXXXX 559
PE Q LMG* RWTLRFSRC* WEL R DQPQ* ACGCWDQCL
Sbjct: 723 PEHQHLMG*HRWTLRFSRC*RWELLRCDQPQ*GACGCWDQCLSASASS*CTSSIDS*SHY 544
Query: 558 XXSLAAALQFETTC 517
SLAA LQFETTC
Sbjct: 543 QSSLAAVLQFETTC 502
Score = 70.3 bits (147), Expect(4) = e-126
Identities = 27/36 (75%), Positives = 31/36 (86%)
Frame = -3 / -3
Query: 133 LKQWEIAKVVATYIPMNGWASSEARIEQLHGCR*EI 26
LK+WEIAK YIP++ WAS+EARIEQLHGCR*EI
Sbjct: 110 LKEWEIAKFEVAYIPLDDWASAEARIEQLHGCR*EI 3
Score = 62.5 bits (130), Expect(4) = e-136
Identities = 25/34 (73%), Positives = 28/34 (82%)
Frame = +1 / +2
Query: 25 KSPICSHAVAQSWPQMKPNHSLVYKSLQPLQFPT 126
KSPIC+ AVAQ PQ+KPNH +VYK LQ LQFPT
Sbjct: 2 KSPICNRAVAQF*PQLKPNHPVVYKLLQTLQFPT 103
Score = 61.1 bits (127), Expect(3) = 2e-098
Identities = 25/36 (69%), Positives = 28/36 (77%)
Frame = +2 / +3
Query: 26 NLLSAAMQLLNPGLR*SPTIHWYISRYNLCNFPLLQ 133
NLLSA +QLLN L *SP I WYIS + LCNFPLL+
Sbjct: 3 NLLSATVQLLNSSLS*SPIIQWYISYFKLCNFPLLK 110
Score = 59.3 bits (123), Expect(3) = 1e-083
Identities = 26/34 (76%), Positives = 27/34 (79%)
Frame = +3 / +1
Query: 24 EISYLQPCSCSILASDEAQPFIGI*VATTFAISH 125
EISYLQPCSCSILAS EAQ GI* + FAISH
Sbjct: 1 EISYLQPCSCSILASAEAQSSSGI*ATSNFAISH 102
Score = 48.7 bits (100), Expect(5) = 9e-095
Identities = 23/34 (67%), Positives = 24/34 (70%)
Frame = -1 / -1
Query: 126 SGKLQRL*RLIYQ*MVGLHLRPGLSNCMAADRRF 25
SGKLQ L LIY M+GL LR LSNC ADRRF
Sbjct: 103 SGKLQSLK*LIYHWMIGLQLRLELSNCTVADRRF 2
Score = 47.3 bits (97), Expect(4) = 3e-074
Identities = 24/34 (70%), Positives = 25/34 (73%)
Frame = -2 / -2
Query: 125 VGNCKGCSDLYTNEWLGFI*GQD*ATAWLQIGDF 24
VGNCK S LYT LGF *G +*ATA LQIGDF
Sbjct: 102 VGNCKV*SSLYTTG*LGFS*G*N*ATARLQIGDF 1
Score = 44.1 bits (90), Expect(5) = 9e-095
Identities = 18/20 (90%), Positives = 18/20 (90%)
Frame = -3 / -1
Query: 286 CL*QQECLPISTQCRTWELQ 227
CL*QQECLPIS QCRT ELQ
Sbjct: 271 CL*QQECLPISMQCRT*ELQ 212
Score = 34.5 bits (69), Expect(4) = e-136
Identities = 11/13 (84%), Positives = 12/13 (92%)
Frame = +3 / +1
Query: 189 LYIPQTCKLCEFG 227
+YIPQ CKLCEFG
Sbjct: 178 IYIPQACKLCEFG 216
Score = 31.3 bits (62), Expect(4) = e-126
Identities = 11/12 (91%), Positives = 11/12 (91%)
Frame = -3 / -3
Query: 226 PNSQSLQVCGMY 191
PNSQSLQ CGMY
Sbjct: 215 PNSQSLQACGMY 180
Score = 30.4 bits (60), Expect(4) = e-126
Identities = 11/13 (84%), Positives = 13/13 (100%)
Frame = -3 / -3
Query: 175 RTPSPVAQSFFDD 137
RTPSPVA+SFF+D
Sbjct: 158 RTPSPVARSFFND 120
Score = 26.3 bits (51), Expect(3) = 2e-098
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = +1 / +2
Query: 190 YTFRRPVSSVSL 225
YTF RPVSSV+L
Sbjct: 179 YTFHRPVSSVNL 214
Score = 25.8 bits (50), Expect(5) = 9e-095
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = -1 / -1
Query: 225 QTHRAYRSAECI 190
Q HRAYR ECI
Sbjct: 214 QIHRAYRPVECI 179
Score = 24.9 bits (48), Expect(4) = e-136
Identities = 11/13 (84%), Positives = 11/13 (84%)
Frame = +3 / +1
Query: 138 SSKKLCATGEGVR 176
S KKL ATGEGVR
Sbjct: 121 SLKKLRATGEGVR 159
Score = 22.6 bits (43), Expect(5) = 9e-095
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = -1 / -1
Query: 174 EHLLR*HRASS 142
EHLL+*H ASS
Sbjct: 157 EHLLQ*HEASS 125
Score = 22.1 bits (42), Expect(4) = 3e-074
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = -2 / -2
Query: 227 TKLTELTGLRNV 192
+K TELTGL NV
Sbjct: 216 SKFTELTGLWNV 181
>gb|AW672062.1|AW672062 LG1_354_G05.b1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 601
Score = 450 bits (977), Expect(2) = e-128
Identities = 178/188 (94%), Positives = 183/188 (97%)
Frame = +3 / +2
Query: 228 WSSQVLHCVEMGRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCG 407
WSSQVLHC+EMGRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCG
Sbjct: 38 WSSQVLHCIEMGRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCG 217
Query: 408 KSCRLRWINYLRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNS 587
KSCRLRWINYLRPDLKRGAF+QDEE+LIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNS
Sbjct: 218 KSCRLRWINYLRPDLKRGAFSQDEEELIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNS 397
Query: 588 CIKKKLRQKGIDPNTHKPLTEADHGGAAPTISTERTSGSSDINPSSTGPLGNLSPLLSET 767
CIKKKLRQKGIDPNTHKPLTEAD GAAPT+STERTSGSSD+NPSS G LGNLS LLSET
Sbjct: 398 CIKKKLRQKGIDPNTHKPLTEADRSGAAPTVSTERTSGSSDVNPSSAGALGNLSHLLSET 577
Query: 768 AQSSMLMP 791
AQSSMLMP
Sbjct: 578 AQSSMLMP 601
Score = 406 bits (881), Expect(2) = e-113
Identities = 173/188 (92%), Positives = 178/188 (94%)
Frame = -2 / -1
Query: 791 GHQH**LSRLAEEGAQVPQRTSA*WVDVAGP*GSLGADGGSCTAVISLSKWLVGVGINAF 612
GHQH**LSRLAEE AQVPQ TS *WVD+AGP*GSLGADGGSC+A ISLSK LVGVGINAF
Sbjct: 601 GHQH**LSRLAEEVAQVPQSTST*WVDIAGP*GSLGADGGSCSAAISLSKGLVGVGINAF 422
Query: 611 LPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECPSLEVWPQIV 432
LPQLLLDARVP*ILDLIISPPWQL CNLRPPV EDSVQL+DE+FFVLGECPSLEVWPQIV
Sbjct: 421 LPQLLLDARVP*ILDLIISPPWQLCCNLRPPVSEDSVQLNDELFFVLGECPSLEVWPQIV 242
Query: 431 YPPQPTTLSAPLKPSEFGNRAPAAMAMLCYVIHEFLILLRGPEPLSQLLLVAARMPPHLN 252
YPPQPTTLSA L+PSEFGNR PAAMAMLCYVIHEFLILLRGPEPLSQLLLVAARMPPHLN
Sbjct: 241 YPPQPTTLSASLEPSEFGNRTPAAMAMLCYVIHEFLILLRGPEPLSQLLLVAARMPPHLN 62
Query: 251 AMQNLGAP 228
AMQNL AP
Sbjct: 61 AMQNLRAP 38
Score = 340 bits (736), Expect = 6e-092
Identities = 154/187 (82%), Positives = 155/187 (82%)
Frame = +1 / +3
Query: 229 GAPRFCIALRWGGILAATSRS*ERGSGPLRRMRNS*IT*QSMAMAAGALFPNSLGFKGAE 408
GA RFCIALRWGGILAATS+S*ERGSGPLRRMRNS*IT*QSMAMAAG LFPNSLG K AE
Sbjct: 39 GALRFCIALRWGGILAATSKS*ERGSGPLRRMRNS*IT*QSMAMAAGVLFPNSLGSKDAE 218
Query: 409 RVVG*GG*TI*GQTSREGHSPXXXXXXXXXXXXXXXXXXXXXQRSCQGGLIMRSRIYGTR 588
RVVG*GG*TI*GQTSREGHSP Q SCQGGLIMRSRIYGTR
Sbjct: 219 RVVG*GG*TI*GQTSREGHSPKTKKSSSLSCTLSSETGGLKLQHSCQGGLIMRSRIYGTR 398
Query: 589 ASRRS*GRKALIPTPTSHLLRLITAVQLPPSAPREPQGPATSTHQALVLWGT*APSSARR 768
ASRRS*GRKALIPTPTS LLRLI A QLPPSAPREPQGPA STHQ LVLWGT*A SSARR
Sbjct: 399 ASRRS*GRKALIPTPTSPLLRLIAAEQLPPSAPREPQGPAMSTHQVLVLWGT*ATSSARR 578
Query: 769 LNHQC*C 789
LNHQC*C
Sbjct: 579 LNHQC*C 599
Score = 305 bits (660), Expect(2) = 2e-088
Identities = 132/150 (88%), Positives = 132/150 (88%)
Frame = -3 / -2
Query: 790 GISIDD*AVSLRRGLKFPRGPVLDGLMSLDPEVLSVLMVGAAPP*SASVSGLWVLGSMPF 611
GISIDD*AVSLRR LKFPR P LDGL SLDPEVLSVL VGAAP SASV GLWVLGSMPF
Sbjct: 600 GISIDD*AVSLRRWLKFPRAPALDGLTSLDPEVLSVLTVGAAPLRSASVRGLWVLGSMPF 421
Query: 610 CLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANAPLLRSGLR*F 431
CLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTAC SW NAPLLRSGLR*F
Sbjct: 420 CLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACSSMMSSSSSWENAPLLRSGLR*F 241
Query: 430 IHLSLQLFPHL*SPASLGTELQQPWPCFVM 341
IHLSLQLFPHL SPASLGTELQQPWPCFVM
Sbjct: 240 IHLSLQLFPHLWSPASLGTELQQPWPCFVM 151
Score = 167 bits (360), Expect(2) = 5e-070
Identities = 73/82 (89%), Positives = 74/82 (90%)
Frame = -1 / -3
Query: 465 MPLS*GLASDSLSTSAYNSFRTFEAQRVWEQSSSSHGHALLCDS*VSHPPQGTRAPFSAS 286
MPLS*GLASDSLSTSAYNSFR F AQRVWEQ+SSSHGHALLCDS*VSHPPQGTRAPFS
Sbjct: 275 MPLS*GLASDSLSTSAYNSFRIFGAQRVWEQNSSSHGHALLCDS*VSHPPQGTRAPFSTF 96
Query: 285 ACSSKNASPSQRNAEPGSSNQT 220
ACSSKNASPSQ NAEP SS T
Sbjct: 95 ACSSKNASPSQCNAEPESSKFT 30
Score = 163 bits (350), Expect(2) = 3e-078
Identities = 74/92 (80%), Positives = 75/92 (81%)
Frame = +2 / +1
Query: 515 EQVVSNCSAAARED***DQESMELVHQEEAEAERH*SQHPQATY*GXXXXXXXXXXXXEN 694
+QVVSNCS AARED***DQESMELVHQEEAEAERH*SQHPQA Y*G EN
Sbjct: 325 KQVVSNCSTAARED***DQESMELVHQEEAEAERH*SQHPQAPY*G*SQRSSSHRQHREN 504
Query: 695 LRVQRHQPIKHWSSGELEPPPQRDGSIINADA 790
LRVQR QPIK W SGELEPPPQRDGSIINADA
Sbjct: 505 LRVQRCQPIKCWCSGELEPPPQRDGSIINADA 600
Score = 152 bits (326), Expect(2) = 3e-078
Identities = 65/72 (90%), Positives = 67/72 (93%)
Frame = +2 / +1
Query: 227 LELPGSALR*DGEAFLLLQAEAEKGALVP*GG*ETHESHNKAWPWLLELCSQTRWASKVR 406
LEL GSAL *DGEAFLLLQA+ EKGALVP*GG*ETHESHNKAWPWLLE CSQTRWA K+R
Sbjct: 37 LELSGSALH*DGEAFLLLQAKVEKGALVP*GG*ETHESHNKAWPWLLEFCSQTRWAPKMR 216
Query: 407 KEL*AEVDKLSE 442
KEL*AEVDKLSE
Sbjct: 217 KEL*AEVDKLSE 252
Score = 120 bits (256), Expect(2) = 5e-070
Identities = 57/91 (62%), Positives = 57/91 (62%)
Frame = -1 / -3
Query: 789 ASALMIEPSRXXXXXXSPEDQCLMG*CRWTLRFSRC*WWELHRRDQPQ*VACGCWDQCLX 610
ASALMIEPSR SPE Q LMG* RWTLRFSRC* WEL R DQPQ* ACGCWDQCL
Sbjct: 599 ASALMIEPSR*GGGSSSPEHQHLMG*HRWTLRFSRC*RWELLRCDQPQ*GACGCWDQCLS 420
Query: 609 XXXXXXXXXXXXXXXXXXXSLAAALQFETTC 517
SLAA LQFETTC
Sbjct: 419 ASASS*CTSSIDS*SHYQSSLAAVLQFETTC 327
Score = 44.1 bits (90), Expect(2) = 2e-088
Identities = 18/20 (90%), Positives = 18/20 (90%)
Frame = -3 / -2
Query: 286 CL*QQECLPISTQCRTWELQ 227
CL*QQECLPIS QCRT ELQ
Sbjct: 96 CL*QQECLPISMQCRT*ELQ 37
Score = 30.4 bits (60), Expect(2) = e-128
Identities = 10/11 (90%), Positives = 10/11 (90%)
Frame = +3 / +3
Query: 195 IPQTCKLCEFG 227
IPQ CKLCEFG
Sbjct: 9 IPQACKLCEFG 41
Score = 26.3 bits (51), Expect(2) = e-113
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = -3 / -1
Query: 226 PNSQSLQVCGM 194
PNSQSLQ CG+
Sbjct: 40 PNSQSLQACGI 8
>gb|CX608930.1|CX608930 ANR1_9_D06.g1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_9_D06_A002 5', mRNA sequence
Length = 831
Score = 415 bits (900), Expect = e-114
Identities = 167/205 (81%), Positives = 181/205 (88%)
Frame = +3 / +1
Query: 204 TCKLCEFGWSSQVLHCVEMGRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPK 383
+C+LC S+ V + MGRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWS+VPK
Sbjct: 214 SCELCRLQSSASVSALLSMGRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSTVPK 393
Query: 384 LAGLQRCGKSCRLRWINYLRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDN 563
LAGLQRCGKSCRLRWINYLRPDLKRGAF+Q+EEDLIIELHAVLGNRWSQIA +LPGRTDN
Sbjct: 394 LAGLQRCGKSCRLRWINYLRPDLKRGAFSQEEEDLIIELHAVLGNRWSQIATRLPGRTDN 573
Query: 564 EIKNLWNSCIKKKLRQKGIDPNTHKPLTEADHGGAAPTISTERTSGSSDINPSSTGPLGN 743
EIKNLWNS IKKKLRQ+GIDPNTHKPL E +H AAPTISTERTS SSD++PSS G LGN
Sbjct: 574 EIKNLWNSSIKKKLRQRGIDPNTHKPLAEVEHSKAAPTISTERTSESSDVDPSSGGALGN 753
Query: 744 LSPLLSETAQSSMLMPVYDKNRAET 818
LS LLSETAQS L+PV K+R ET
Sbjct: 754 LSHLLSETAQSPELLPVLGKHRKET 828
Score = 248 bits (536), Expect = 2e-064
Identities = 123/193 (63%), Positives = 127/193 (65%)
Frame = -3 / -2
Query: 817 VSARFLSYTGISIDD*AVSLRRGLKFPRGPVLDGLMSLDPEVLSVLMVGAAPP*SASVSG 638
VS R L TG S D AVSLRR LK P P L+G SLD EVLSVL+VGAA S S G
Sbjct: 827 VSLRCLPSTGSSSGDCAVSLRRWLKLPSAPPLEGSTSLDSEVLSVLIVGAALLCSTSARG 648
Query: 637 LWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANAP 458
LWVLGSMP C SFFLM EF RFLISLSVLPG+ AI*DHLFP TA S NAP
Sbjct: 647 LWVLGSMPLCRSFFLMLEFQRFLISLSVLPGNLVAI*DHLFPSTA*SSMIRSSSS*ENAP 468
Query: 457 LLRSGLR*FIHLSLQLFPHL*SPASLGTELQQPWPCFVMXXXXXXXXXXXXXXXXXFCL* 278
LLRSGLR*FIHLSLQL PHL*SPAS GT LQQP PC VM FCL*
Sbjct: 467 LLRSGLR*FIHLSLQLLPHL*SPASFGTVLQQPCPCLVMWFMSFSSSSGDQSPFLSFCL* 288
Query: 277 QQECLPISTQCRT 239
QQECLPI + T
Sbjct: 287 QQECLPIESNAET 249
Score = 218 bits (471), Expect = 2e-055
Identities = 102/186 (54%), Positives = 129/186 (69%)
Frame = -2 / -1
Query: 815 FSTILVVHGHQH**LSRLAEEGAQVPQRTSA*WVDVAGP*GSLGADGGSCTAVISLSKWL 636
F +L H Q *L LAE+ AQV + T+ * V++ G GSL D C AV +L K L
Sbjct: 825 FFAMLTEHWQQLW*LCCLAEKMAQVAKCTTT*RVNITGLRGSLSTDCWRCFAVFNLGKGL 646
Query: 635 VGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECPS 456
VGVG++A LP+LLLDA VP IL+L+IS Q CNLRPPV + S++ +D+VFF+L EC S
Sbjct: 645 VGVGVDASLPELLLDA*VPEILNLVISSSRQPCCNLRPPVSQYSMKFNDKVFFLLRECTS 466
Query: 455 LEVWPQIVYPPQPTTLSAPLKPSEFGNRAPAAMAMLCYVIHEFLILLRGPEPLSQLLLVA 276
+V PQ++YPPQP L+ PLKP + + APAAM +L YV+HE LI LR PEPL QLLLV
Sbjct: 465 FKVRPQVIYPPQPAALATPLKPCKLRDSAPAAMPVLGYVVHELLIFLRRPEPLPQLLLVT 286
Query: 275 ARMPPH 258
A +PPH
Sbjct: 285 AGVPPH 268
Score = 90.4 bits (191), Expect(2) = 2e-036
Identities = 49/94 (52%), Positives = 55/94 (58%)
Frame = +1 / +2
Query: 535 QRSCQGGLIMRSRIYGTRASRRS*GRKALIPTPTSHLLRLITAVQLPPSAPREPQGPATS 714
Q+ C LI R RI GT+ASRRS GR+A PTPTS L RL TA Q S REP P
Sbjct: 545 QQGCLEELITRLRISGTQASRRSSGREASTPTPTSPLPRLNTAKQRQQSVLREPLSPVML 724
Query: 715 THQALVLWGT*APSSARRLNHQC*CPCTTRIVLK 816
T Q +V T*A SAR+ NHQ C C+ I K
Sbjct: 725 TLQVVVHLAT*AIFSARQHNHQSCCQCSVSIAKK 826
Score = 85.4 bits (180), Expect(2) = 5e-035
Identities = 46/95 (48%), Positives = 55/95 (57%)
Frame = +2 / +3
Query: 515 EQVVSNCSAAARED***DQESMELVHQEEAEAERH*SQHPQATY*GXXXXXXXXXXXXEN 694
+QVVS+C+ A ++** D ES+EL HQEEA AERH QHPQA G EN
Sbjct: 525 KQVVSDCNKVAWKN**RD*ESLELKHQEEAPAERHRPQHPQAPCRG*TQQSSANNQY*EN 704
Query: 695 LRVQRHQPIKHWSSGELEPPPQRDGSIINADARVR 799
L VQ P K W + +LEP QRD +I A A R
Sbjct: 705 L*VQ*C*PFKWWCTWQLEPSSQRDSTITRAAASAR 809
Score = 85.4 bits (180), Expect(2) = 5e-035
Identities = 41/62 (66%), Positives = 47/62 (75%)
Frame = +2 / +3
Query: 257 DGEAFLLLQAEAEKGALVP*GG*ETHESHNKAWPWLLELCSQTRWASKVRKEL*AEVDKL 436
+GEA LLLQAEAE+GALV *G *E HE HN+A WLLE C + AS+V +EL AEVDKL
Sbjct: 267 NGEALLLLQAEAEEGALVS*GR*EAHEPHNQARAWLLEHCPEACRASEVWQELQAEVDKL 446
Query: 437 SE 442
E
Sbjct: 447 PE 452
Score = 85.4 bits (180), Expect(2) = 2e-036
Identities = 44/77 (57%), Positives = 51/77 (66%)
Frame = +1 / +2
Query: 238 RFCIALRWGGILAATSRS*ERGSGPLRRMRNS*IT*QSMAMAAGALFPNSLGFKGAERVV 417
+F +WGG A TSRS* RGSG LR+MR+S* T* S MAAGAL + GF+G R
Sbjct: 248 QFQHCFQWGGTPAVTSRS*GRGSGLLRKMRSS*TT*PSTGMAAGALSRSLQGFRGVARAA 427
Query: 418 G*GG*TI*GQTSREGHS 468
G*GG* *G T +E HS
Sbjct: 428 G*GG*IT*GLTLKEVHS 478
Score = 83.1 bits (175), Expect(2) = 6e-019
Identities = 42/69 (60%), Positives = 48/69 (69%)
Frame = -1 / -3
Query: 465 MPLS*GLASDSLSTSAYNSFRTFEAQRVWEQSSSSHGHALLCDS*VSHPPQGTRAPFSAS 286
M L *G AS +LSTSA +S T EA + Q SSSH A LC S* SH PQ TRAP SAS
Sbjct: 475 MHLF*GQASGNLSTSACSSCHTSEALQASGQCSSSHARAWLCGS*ASHLPQETRAPSSAS 296
Query: 285 ACSSKNASP 259
AC+S++ASP
Sbjct: 295 ACNSRSASP 269
Score = 37.7 bits (76), Expect(2) = 6e-019
Identities = 18/37 (48%), Positives = 21/37 (56%)
Frame = -1 / -3
Query: 723 LMG*CRWTLRFSRC*WWELHRRDQPQ*VACGCWDQCL 613
L G WT RFS+ * L QP+ ACGCW +CL
Sbjct: 733 LKGQHHWTQRFSQY*LLALLCCVQPRQGACGCWGRCL 623
>gb|BI098957.1|BI098957 IP1_35_D12.b1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 556
Score = 409 bits (888), Expect = e-113
Identities = 168/182 (92%), Positives = 174/182 (95%)
Frame = +3 / +3
Query: 450 LKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPN 629
LKRGAF+QDEE+LIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPN
Sbjct: 9 LKRGAFSQDEEELIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPN 188
Query: 630 THKPLTEADHGGAAPTISTERTSGSSDINPSSTGPLGNLSPLLSETAQSSMLMPVYDKNR 809
THKPLTEAD GAAPT+STERTSGSSD+NPSS G LGNLS LLSETAQSSMLMP+YDKNR
Sbjct: 189 THKPLTEADRSGAAPTVSTERTSGSSDVNPSSAGALGNLSHLLSETAQSSMLMPMYDKNR 368
Query: 810 AETPNLARPKLPPKELFLEQLTAGHESPSTCHSSGQTLYFPFQQPLGYNSESGSSDGANM 989
ETPNLARPK+PPKELFLEQLTAGHESPSTC SSGQTLYFPFQQPLGYNSESGS DGANM
Sbjct: 369 TETPNLARPKVPPKELFLEQLTAGHESPSTCRSSGQTLYFPFQQPLGYNSESGSGDGANM 548
Query: 990 NS 995
NS
Sbjct: 549 NS 554
Score = 337 bits (730), Expect = 4e-091
Identities = 143/165 (86%), Positives = 145/165 (87%)
Frame = -3 / -1
Query: 946 KGCWKGK*RVWPDEWQVDGLSCPAVSCSRNSSFGGSLGRAKFGVSARFLSYTGISIDD*A 767
KGCWKGK*RVWPDE QVDGLSCPAVSCSRN+SFGG+LGRAKFGVS RFLSY GISIDD*A
Sbjct: 505 KGCWKGK*RVWPDERQVDGLSCPAVSCSRNNSFGGTLGRAKFGVSVRFLSYMGISIDD*A 326
Query: 766 VSLRRGLKFPRGPVLDGLMSLDPEVLSVLMVGAAPP*SASVSGLWVLGSMPFCLSFFLMH 587
VSLRR LKFPR P LDGL SLDPEVLSVL VGAAP SASV GLWVLGSMPFCLSFFLMH
Sbjct: 325 VSLRRWLKFPRAPALDGLTSLDPEVLSVLTVGAAPLRSASVRGLWVLGSMPFCLSFFLMH 146
Query: 586 EFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANAPLL 452
EFHRFLISLSVLPGSCAAI*DHLFPRTAC SW NAPLL
Sbjct: 145 EFHRFLISLSVLPGSCAAI*DHLFPRTACSSMMSSSSSWENAPLL 11
Score = 331 bits (717), Expect = 2e-089
Identities = 144/182 (79%), Positives = 147/182 (80%)
Frame = +1 / +1
Query: 451 SREGHSPXXXXXXXXXXXXXXXXXXXXXQRSCQGGLIMRSRIYGTRASRRS*GRKALIPT 630
SREGHSP Q SCQGGLIMRSRIYGTRASRRS*GRKALIPT
Sbjct: 10 SREGHSPKTKKSSSLSCTLSSETGGLKLQHSCQGGLIMRSRIYGTRASRRS*GRKALIPT 189
Query: 631 PTSHLLRLITAVQLPPSAPREPQGPATSTHQALVLWGT*APSSARRLNHQC*CPCTTRIV 810
PTS LLRLI A QLPPSAPREPQGPA STHQ LVLWGT*A SSARRLNHQC*CPC TRI
Sbjct: 190 PTSPLLRLIAAEQLPPSAPREPQGPAMSTHQVLVLWGT*ATSSARRLNHQC*CPCMTRIA 369
Query: 811 LKHQTWHALSCHQRSCSWSSLLLDTRVHQPATHQAKLSISLSNSP*ATTVRVAAAMGRI* 990
LK +TWHAL CHQ+SCSWSSLLLDTRVHQPA HQA+LSISLSNS *ATTVRVA AMGRI*
Sbjct: 370 LKLRTWHALRCHQKSCSWSSLLLDTRVHQPAAHQARLSISLSNSL*ATTVRVAVAMGRI* 549
Query: 991 IH 996
IH
Sbjct: 550 IH 555
Score = 309 bits (670), Expect = 7e-083
Identities = 144/182 (79%), Positives = 149/182 (81%)
Frame = -2 / -3
Query: 995 *IHIRPIXXXXXXXXXXXXLEREIESLA**VAG*WTLVSSSKXXXXXXXXXXLRACQVWC 816
*IHIRPI LEREIESLA** AG*WTLVSSSK LRACQV
Sbjct: 554 *IHIRPIATATLTVVA*RLLEREIESLA**AAG*WTLVSSSKLLQEQLFWWHLRACQVRS 375
Query: 815 FSTILVVHGHQH**LSRLAEEGAQVPQRTSA*WVDVAGP*GSLGADGGSCTAVISLSKWL 636
FS ILV+HGHQH**LSRLAEE AQVPQ TS *WVD+AGP*GSLGADGGSC+A ISLSK L
Sbjct: 374 FSAILVIHGHQH**LSRLAEEVAQVPQSTST*WVDIAGP*GSLGADGGSCSAAISLSKGL 195
Query: 635 VGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECPS 456
VGVGINAFLPQLLLDARVP*ILDLIISPPWQL CNLRPPV EDSVQL+DE+FFVLGECPS
Sbjct: 194 VGVGINAFLPQLLLDARVP*ILDLIISPPWQLCCNLRPPVSEDSVQLNDELFFVLGECPS 15
Query: 455 LE 450
LE
Sbjct: 14 LE 9
Score = 259 bits (561), Expect = 8e-068
Identities = 116/143 (81%), Positives = 120/143 (83%)
Frame = +2 / +2
Query: 515 EQVVSNCSAAARED***DQESMELVHQEEAEAERH*SQHPQATY*GXXXXXXXXXXXXEN 694
+QVVSNCS AARED***DQESMELVHQEEAEAERH*SQHPQA Y*G EN
Sbjct: 74 KQVVSNCSTAARED***DQESMELVHQEEAEAERH*SQHPQAPY*G*SQRSSSHRQHREN 253
Query: 695 LRVQRHQPIKHWSSGELEPPPQRDGSIINADARVRQESC*NTKLGTP*AATKGAVPGAAY 874
LRVQR QPIK W SGELEPPPQRDGSIINADA V QES *N++LGTP* ATK VPGAAY
Sbjct: 254 LRVQRCQPIKCWCSGELEPPPQRDGSIINADAHV*QESH*NSELGTP*GATKRVVPGAAY 433
Query: 875 CWTRESINLPLIRPNSLFPFPTA 943
CWTRESINLPLIRP+SLFPFPTA
Sbjct: 434 CWTRESINLPLIRPDSLFPFPTA 502
Score = 209 bits (451), Expect = 1e-052
Identities = 100/144 (69%), Positives = 101/144 (70%)
Frame = -1 / -2
Query: 948 LRAVGKGNREFGLMSGRLMDSRVQQ*AAPGTAPLVAA*GVPSLVFQHDSCRTRASALMIE 769
L+AVGKGNRE GLMSGRLMDSRVQQ*AAPGT LVA *GVPS FQ DSC T ASALMIE
Sbjct: 507 LKAVGKGNRESGLMSGRLMDSRVQQ*AAPGTTLLVAP*GVPSSEFQCDSCHTWASALMIE 328
Query: 768 PSRXXXXXXSPEDQCLMG*CRWTLRFSRC*WWELHRRDQPQ*VACGCWDQCLXXXXXXXX 589
PSR SPE Q LMG* RWTLRFSRC* WEL R DQPQ* ACGCWDQCL
Sbjct: 327 PSR*GGGSSSPEHQHLMG*HRWTLRFSRC*RWELLRCDQPQ*GACGCWDQCLSASASS*C 148
Query: 588 XXXXXXXXXXXXSLAAALQFETTC 517
SLAA LQFETTC
Sbjct: 147 TSSIDS*SHYQSSLAAVLQFETTC 76
>gb|CD226268.1|CD226268 CCC1_44_D06.g1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_44_D06_A007 5', mRNA sequence
Length = 665
Score = 385 bits (835), Expect = e-105
Identities = 152/181 (83%), Positives = 163/181 (90%)
Frame = +3 / +2
Query: 204 TCKLCEFGWSSQVLHCVEMGRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPK 383
+C+LC S+ V + MGRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWS+VPK
Sbjct: 122 SCELCRLQSSASVSALLSMGRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSTVPK 301
Query: 384 LAGLQRCGKSCRLRWINYLRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDN 563
LAGLQRCGKSCRLRWINYLRPDLKRGAF+Q+EEDLIIELHAVLGNRWSQIA +LPGRTDN
Sbjct: 302 LAGLQRCGKSCRLRWINYLRPDLKRGAFSQEEEDLIIELHAVLGNRWSQIATRLPGRTDN 481
Query: 564 EIKNLWNSCIKKKLRQKGIDPNTHKPLTEADHGGAAPTISTERTSGSSDINPSSTGPLGN 743
EIKNLWNS IKKKLRQKGIDPNTHKPL E +H AAPTISTERTS SSD++PSS G LGN
Sbjct: 482 EIKNLWNSSIKKKLRQKGIDPNTHKPLAEVEHSXAAPTISTERTSESSDVDPSSGGALGN 661
Query: 744 L 746
L
Sbjct: 662 L 664
Score = 228 bits (492), Expect = 3e-058
Identities = 109/169 (64%), Positives = 113/169 (66%)
Frame = -3 / -3
Query: 745 KFPRGPVLDGLMSLDPEVLSVLMVGAAPP*SASVSGLWVLGSMPFCLSFFLMHEFHRFLI 566
K P P L+G SLD EVLSVL+VGAA S S GLWVLGSMPFC SFFLM EF RFLI
Sbjct: 663 KLPSAPPLEGSTSLDSEVLSVLIVGAAXLCSTSARGLWVLGSMPFCRSFFLMLEFQRFLI 484
Query: 565 SLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANAPLLRSGLR*FIHLSLQLFPHL*SPA 386
SLSVLPG+ AI*DHLFP TA S NAPLLRSGLR*FIHLSLQL PHL*SPA
Sbjct: 483 SLSVLPGNLVAI*DHLFPSTA*SSMIRSSSS*ENAPLLRSGLR*FIHLSLQLLPHL*SPA 304
Query: 385 SLGTELQQPWPCFVMXXXXXXXXXXXXXXXXXFCL*QQECLPISTQCRT 239
S GT LQQP PC VM FCL*QQECLPI + T
Sbjct: 303 SFGTVLQQPCPCLVMWFMSFSSSSGDQSPFLSFCL*QQECLPIESNAET 157
Score = 214 bits (462), Expect = 4e-054
Identities = 94/163 (57%), Positives = 119/163 (73%)
Frame = -2 / -2
Query: 746 QVPQRTSA*WVDVAGP*GSLGADGGSCTAVISLSKWLVGVGINAFLPQLLLDARVP*ILD 567
QV + T+ * V++ G GSL D G C AV +L K LVGVG++AFLP+LLLDA VP IL+
Sbjct: 664 QVAKCTTT*RVNITGLRGSLSTDCGRCXAVFNLGKGLVGVGVDAFLPELLLDA*VPEILN 485
Query: 566 LIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECPSLEVWPQIVYPPQPTTLSAPLKPS 387
L+IS Q CNLRPPV + S++ +D+VFF+L EC S +V PQ++YPPQP L+ PLKP
Sbjct: 484 LVISSSRQPCCNLRPPVSQYSMKFNDKVFFLLRECTSFKVRPQVIYPPQPAALATPLKPC 305
Query: 386 EFGNRAPAAMAMLCYVIHEFLILLRGPEPLSQLLLVAARMPPH 258
+ + APAAM +L YV+HE LI LR PEPL QLLLV A +PPH
Sbjct: 304 KLRDSAPAAMPVLGYVVHELLIFLRRPEPLPQLLLVTAGVPPH 176
Score = 85.4 bits (180), Expect(2) = 2e-029
Identities = 41/62 (66%), Positives = 47/62 (75%)
Frame = +2 / +1
Query: 257 DGEAFLLLQAEAEKGALVP*GG*ETHESHNKAWPWLLELCSQTRWASKVRKEL*AEVDKL 436
+GEA LLLQAEAE+GALV *G *E HE HN+A WLLE C + AS+V +EL AEVDKL
Sbjct: 175 NGEALLLLQAEAEEGALVS*GR*EAHEPHNQARAWLLEHCPEACRASEVWQELQAEVDKL 354
Query: 437 SE 442
E
Sbjct: 355 PE 360
Score = 85.4 bits (180), Expect(2) = 1e-031
Identities = 44/77 (57%), Positives = 51/77 (66%)
Frame = +1 / +3
Query: 238 RFCIALRWGGILAATSRS*ERGSGPLRRMRNS*IT*QSMAMAAGALFPNSLGFKGAERVV 417
+F +WGG A TSRS* RGSG LR+MR+S* T* S MAAGAL + GF+G R
Sbjct: 156 QFQHCFQWGGTPAVTSRS*GRGSGLLRKMRSS*TT*PSTGMAAGALSRSLQGFRGVARAA 335
Query: 418 G*GG*TI*GQTSREGHS 468
G*GG* *G T +E HS
Sbjct: 336 G*GG*IT*GLTLKEVHS 386
Score = 83.1 bits (175), Expect(2) = 8e-021
Identities = 42/69 (60%), Positives = 48/69 (69%)
Frame = -1 / -1
Query: 465 MPLS*GLASDSLSTSAYNSFRTFEAQRVWEQSSSSHGHALLCDS*VSHPPQGTRAPFSAS 286
M L *G AS +LSTSA +S T EA + Q SSSH A LC S* SH PQ TRAP SAS
Sbjct: 383 MHLF*GQASGNLSTSACSSCHTSEALQASGQCSSSHARAWLCGS*ASHLPQETRAPSSAS 204
Query: 285 ACSSKNASP 259
AC+S++ASP
Sbjct: 203 ACNSRSASP 177
Score = 74.4 bits (156), Expect(2) = 1e-031
Identities = 40/71 (56%), Positives = 43/71 (60%)
Frame = +1 / +3
Query: 535 QRSCQGGLIMRSRIYGTRASRRS*GRKALIPTPTSHLLRLITAVQLPPSAPREPQGPATS 714
Q+ C LI R RI GT+ASRRS GRKA PTPTS L RL TA Q P S REP P
Sbjct: 453 QQGCLEELITRLRISGTQASRRSSGRKASTPTPTSPLPRLNTAXQRPQSVLREPLSPVML 632
Query: 715 THQALVLWGT* 747
T Q +V T*
Sbjct: 633 TLQVVVHLAT* 665
Score = 67.0 bits (140), Expect(2) = 2e-029
Identities = 38/77 (49%), Positives = 46/77 (59%)
Frame = +2 / +1
Query: 515 EQVVSNCSAAARED***DQESMELVHQEEAEAERH*SQHPQATY*GXXXXXXXXXXXXEN 694
+QVVS+C+ A ++** D ES+EL HQEEA AERH QHPQA G EN
Sbjct: 433 KQVVSDCNKVAWKN**RD*ESLELKHQEEAPAERHRPQHPQAPCRG*TQXSSAHNQY*EN 612
Query: 695 LRVQRHQPIKHWSSGEL 745
L VQ P K W + +L
Sbjct: 613 L*VQ*C*PFKWWCTWQL 663
Score = 43.7 bits (89), Expect(2) = 8e-021
Identities = 19/37 (51%), Positives = 22/37 (59%)
Frame = -1 / -1
Query: 723 LMG*CRWTLRFSRC*WWELHRRDQPQ*VACGCWDQCL 613
L G WT RFS+ * W L QP+ ACGCW +CL
Sbjct: 641 LKGQHHWTQRFSQY*LWALLCCVQPRQGACGCWGRCL 531
>gb|CW448607.1|CW448607 fsbb001f182e24k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f182e24, DNA
sequence
Length = 806
Score = 174 bits (375), Expect(3) = e-103
Identities = 73/87 (83%), Positives = 77/87 (88%)
Frame = +3 / +3
Query: 516 NRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPNTHKPLTEADHGGAAPTISTERT 695
NRWSQIA +LPGRTDNEIKNLWNS IKKKLRQKGIDPNTHKPL E +H AAPTISTERT
Sbjct: 546 NRWSQIATRLPGRTDNEIKNLWNSSIKKKLRQKGIDPNTHKPLAEVEHSKAAPTISTERT 725
Query: 696 SGSSDINPSSTGPLGNLSPLLSETAQS 776
S SSD++PSS G LGNLS LLSETAQS
Sbjct: 726 SESSDVDPSSGGALGNLSHLLSETAQS 806
Score = 136 bits (291), Expect(3) = 2e-056
Identities = 64/87 (73%), Positives = 67/87 (77%)
Frame = -3 / -2
Query: 775 D*AVSLRRGLKFPRGPVLDGLMSLDPEVLSVLMVGAAPP*SASVSGLWVLGSMPFCLSFF 596
D AVSLRR LK P P L+G SLD EVLSVL+VGAA S S GLWVLGSMPFC SFF
Sbjct: 805 DCAVSLRRWLKLPSAPPLEGSTSLDSEVLSVLIVGAALLCSTSARGLWVLGSMPFCRSFF 626
Query: 595 LMHEFHRFLISLSVLPGSCAAI*DHLF 515
LM EF RFLISLSVLPG+ AI*DHLF
Sbjct: 625 LMLEFQRFLISLSVLPGNLVAI*DHLF 545
Score = 133 bits (284), Expect(3) = e-103
Identities = 49/63 (77%), Positives = 54/63 (85%)
Frame = +3 / +2
Query: 204 TCKLCEFGWSSQVLHCVEMGRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPK 383
+C+LC S+ V + MGRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWS+VPK
Sbjct: 17 SCELCRLQSSASVSALLSMGRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSTVPK 196
Query: 384 LAG 392
LAG
Sbjct: 197 LAG 205
Score = 110 bits (235), Expect(3) = e-103
Identities = 43/46 (93%), Positives = 46/46 (100%)
Frame = +3 / +1
Query: 384 LAGLQRCGKSCRLRWINYLRPDLKRGAFAQDEEDLIIELHAVLGNR 521
+AGLQRCGKSCRLRWINYLRPDLKRGAF+Q+EEDLIIELHAVLGNR
Sbjct: 322 MAGLQRCGKSCRLRWINYLRPDLKRGAFSQEEEDLIIELHAVLGNR 459
Score = 97.3 bits (206), Expect(3) = 5e-044
Identities = 50/87 (57%), Positives = 61/87 (70%)
Frame = -2 / -1
Query: 776 *LSRLAEEGAQVPQRTSA*WVDVAGP*GSLGADGGSCTAVISLSKWLVGVGINAFLPQLL 597
*L LAE+ AQV + T+ * V++ G GSL D C AV +L K LVGVG++AFLP+LL
Sbjct: 806 *LCCLAEKMAQVAKCTTT*RVNITGLRGSLSTDCWRCFAVFNLGKGLVGVGVDAFLPELL 627
Query: 596 LDARVP*ILDLIISPPWQLRCNLRPPV 516
LDA VP IL+L+IS Q CNLRPPV
Sbjct: 626 LDA*VPEILNLVISSSRQPCCNLRPPV 546
Score = 83.1 bits (175), Expect(3) = 4e-031
Identities = 44/87 (50%), Positives = 52/87 (59%)
Frame = +2 / +2
Query: 515 EQVVSNCSAAARED***DQESMELVHQEEAEAERH*SQHPQATY*GXXXXXXXXXXXXEN 694
EQVVS+C+ A ++** D ES+EL HQEEA AERH QHPQA G EN
Sbjct: 545 EQVVSDCNKVAWKN**RD*ESLELKHQEEAPAERHRPQHPQAPCRG*TQQSSANNQY*EN 724
Query: 695 LRVQRHQPIKHWSSGELEPPPQRDGSI 775
L VQ P K W + +LEP QRD +I
Sbjct: 725 L*VQ*C*PFKWWCTWQLEPSSQRDSTI 805
Score = 77.6 bits (163), Expect(3) = 8e-025
Identities = 44/80 (55%), Positives = 48/80 (60%)
Frame = +1 / +1
Query: 535 QRSCQGGLIMRSRIYGTRASRRS*GRKALIPTPTSHLLRLITAVQLPPSAPREPQGPATS 714
Q+ C LI R RI GT+ASRRS GRKA PTPTS L RL TA Q S REP P
Sbjct: 565 QQGCLEELITRLRISGTQASRRSSGRKASTPTPTSPLPRLNTAKQRQQSVLREPLSPVML 744
Query: 715 THQALVLWGT*APSSARRLN 774
T Q +V T*A SAR+ N
Sbjct: 745 TLQVVVHLAT*AIFSARQHN 804
Score = 67.0 bits (140), Expect(3) = 2e-056
Identities = 24/44 (54%), Positives = 34/44 (77%)
Frame = -2 / -3
Query: 521 PVPEDSVQLDDEVFFVLGECPSLEVWPQIVYPPQPTTLSAPLKP 390
PV + S++ +D+VFF+L EC S +V PQ++YPPQP L+ PLKP
Sbjct: 459 PVSQYSMKFNDKVFFLLRECTSFKVRPQVIYPPQPAALATPLKP 328
Score = 66.6 bits (139), Expect(3) = 5e-044
Identities = 32/46 (69%), Positives = 33/46 (71%)
Frame = -3 / -1
Query: 523 HLFPRTACXXXXXXXXSWANAPLLRSGLR*FIHLSLQLFPHL*SPA 386
+LFP TA S NAPLLRSGLR*FIHLSLQL PHL*SPA
Sbjct: 461 YLFPSTA*SSMIRSSSS*ENAPLLRSGLR*FIHLSLQLLPHL*SPA 324
Score = 66.1 bits (138), Expect(3) = 4e-031
Identities = 29/42 (69%), Positives = 33/42 (78%)
Frame = +2 / +1
Query: 257 DGEAFLLLQAEAEKGALVP*GG*ETHESHNKAWPWLLELCSQ 382
+GEA LLLQAEAE+GALV *G *E HE HN+A WLLE C +
Sbjct: 70 NGEALLLLQAEAEEGALVS*GR*EAHEPHNQARAWLLEHCPE 195
Score = 64.8 bits (135), Expect(3) = 2e-056
Identities = 27/38 (71%), Positives = 30/38 (78%)
Frame = -2 / -2
Query: 371 APAAMAMLCYVIHEFLILLRGPEPLSQLLLVAARMPPH 258
APAAM +L YV+HE LI LR PEPL QLLLV A +PPH
Sbjct: 184 APAAMPVLGYVVHELLIFLRRPEPLPQLLLVTAGVPPH 71
Score = 62.0 bits (129), Expect(3) = 5e-044
Identities = 27/39 (69%), Positives = 30/39 (76%)
Frame = -1 / -1
Query: 375 QSSSSHGHALLCDS*VSHPPQGTRAPFSASACSSKNASP 259
Q SSSH A LC S* SH PQ TRAP SASAC+S++ASP
Sbjct: 188 QCSSSHARAWLCGS*ASHLPQETRAPSSASACNSRSASP 72
Score = 58.3 bits (121), Expect(3) = 8e-025
Identities = 29/46 (63%), Positives = 33/46 (71%)
Frame = +1 / +3
Query: 238 RFCIALRWGGILAATSRS*ERGSGPLRRMRNS*IT*QSMAMAAGAL 375
+F +WGG A TSRS* RGSG LR+MR+S* T* S MAAGAL
Sbjct: 51 QFQHCFQWGGTPAVTSRS*GRGSGLLRKMRSS*TT*PSTGMAAGAL 188
Score = 55.1 bits (114), Expect(2) = 1e-010
Identities = 25/51 (49%), Positives = 26/51 (50%)
Frame = -3 / -3
Query: 391 PASLGTELQQPWPCFVMXXXXXXXXXXXXXXXXXFCL*QQECLPISTQCRT 239
PAS GT LQQP PC VM FCL*QQECLPI + T
Sbjct: 204 PASFGTVLQQPCPCLVMWFMSFSSSSGDQSPFLSFCL*QQECLPIESNAET 52
Score = 37.7 bits (76), Expect(2) = 1e-010
Identities = 18/37 (48%), Positives = 21/37 (56%)
Frame = -1 / -3
Query: 723 LMG*CRWTLRFSRC*WWELHRRDQPQ*VACGCWDQCL 613
L G WT RFS+ * L QP+ ACGCW +CL
Sbjct: 753 LKGQHHWTQRFSQY*LLALLCCVQPRQGACGCWGRCL 643
Score = 33.1 bits (66), Expect(3) = 4e-031
Identities = 15/26 (57%), Positives = 17/26 (65%)
Frame = +1 / +2
Query: 391 GFKGAERVVG*GG*TI*GQTSREGHS 468
GF+G R G*GG* *G T +E HS
Sbjct: 329 GFRGVARAAG*GG*IT*GLTLKEVHS 406
Score = 24.9 bits (48), Expect(3) = 8e-025
Identities = 12/17 (70%), Positives = 14/17 (82%)
Frame = +2 / +3
Query: 392 ASKVRKEL*AEVDKLSE 442
AS+V +EL AEVDKL E
Sbjct: 330 ASEVWQELQAEVDKLPE 380
>gb|BF655998.1|BF655998 FM1_42_F08.b1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 507
Score = 374 bits (811), Expect = e-102
Identities = 151/167 (90%), Positives = 158/167 (94%)
Frame = +3 / +3
Query: 327 KLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRGAFAQDEEDLIIELHA 506
+LMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRGAF+QDEE+LIIELHA
Sbjct: 6 RLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRGAFSQDEEELIIELHA 185
Query: 507 VLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPNTHKPLTEADHGGAAPTIST 686
VLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPNTHKPLTEAD GAAPT++T
Sbjct: 186 VLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPNTHKPLTEADRSGAAPTVTT 365
Query: 687 ERTSGSSDINPSSTGPLGNLSPLLSETAQSSMLMPVYDKNRAETPNL 827
ERTSGSSD+NP S G LGNLS LLSETAQSSMLM YDKNR E+PNL
Sbjct: 366 ERTSGSSDVNP*SAGALGNLSHLLSETAQSSMLMHNYDKNRTESPNL 506
Score = 333 bits (722), Expect = 5e-090
Identities = 143/166 (86%), Positives = 150/166 (90%)
Frame = -2 / -2
Query: 827 QVWCFSTILVVHGHQH**LSRLAEEGAQVPQRTSA*WVDVAGP*GSLGADGGSCTAVISL 648
QV FS ILV+ HQH**LSRLAE+ AQVPQ TS WVD+AGP*GSLG DGGSC+A ISL
Sbjct: 506 QVRTFSAILVIIVHQH**LSRLAEKVAQVPQSTSTSWVDIAGP*GSLGGDGGSCSAAISL 327
Query: 647 SKWLVGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLG 468
SK LVGVGINAFLPQLLLDARVP*ILDLIISPPWQL CNLRPPV EDSVQL+DE+FFVLG
Sbjct: 326 SKGLVGVGINAFLPQLLLDARVP*ILDLIISPPWQLCCNLRPPVSEDSVQLNDELFFVLG 147
Query: 467 ECPSLEVWPQIVYPPQPTTLSAPLKPSEFGNRAPAAMAMLCYVIHE 330
ECPSLEVWPQIVYPPQPTTLSA L+PSEFGNR PAAMAMLCYVIHE
Sbjct: 146 ECPSLEVWPQIVYPPQPTTLSASLEPSEFGNRTPAAMAMLCYVIHE 9
Score = 313 bits (677), Expect = 8e-084
Identities = 137/162 (84%), Positives = 139/162 (85%)
Frame = -3 / -3
Query: 826 KFGVSARFLSYTGISIDD*AVSLRRGLKFPRGPVLDGLMSLDPEVLSVLMVGAAPP*SAS 647
KFG+S RFLS ISIDD*AVSLRR LKFPR P L GL SLDPEVLSV+ VGAAP SAS
Sbjct: 505 KFGLSVRFLS*LCISIDD*AVSLRRWLKFPRAPALHGLTSLDPEVLSVVTVGAAPLRSAS 326
Query: 646 VSGLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWA 467
V GLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTAC SW
Sbjct: 325 VRGLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACSSMMSSSSSWE 146
Query: 466 NAPLLRSGLR*FIHLSLQLFPHL*SPASLGTELQQPWPCFVM 341
NAPLLRSGLR*FIHLSLQLFPHL SPASLGTELQQPWPCFVM
Sbjct: 145 NAPLLRSGLR*FIHLSLQLFPHLWSPASLGTELQQPWPCFVM 20
Score = 277 bits (599), Expect = 5e-073
Identities = 127/168 (75%), Positives = 129/168 (76%)
Frame = +1 / +1
Query: 325 RNS*IT*QSMAMAAGALFPNSLGFKGAERVVG*GG*TI*GQTSREGHSPXXXXXXXXXXX 504
R S*IT*QSMAMAAG LFPNSLG K AERVVG*GG*TI*GQTSREGHSP
Sbjct: 4 RGS*IT*QSMAMAAGVLFPNSLGSKDAERVVG*GG*TI*GQTSREGHSPKTKKSSSLSCT 183
Query: 505 XXXXXXXXXXQRSCQGGLIMRSRIYGTRASRRS*GRKALIPTPTSHLLRLITAVQLPPSA 684
Q SCQGGLIMRSRIYGTRASRRS*GRKALIPTPTS LLRLI A QLPPS
Sbjct: 184 LSSETGGLKLQHSCQGGLIMRSRIYGTRASRRS*GRKALIPTPTSPLLRLIAAEQLPPSP 363
Query: 685 PREPQGPATSTHQALVLWGT*APSSARRLNHQC*CPCTTRIVLKHQTW 828
PREPQGPA STH+ LVLWGT*A SARRLNHQC*C TRI LK +TW
Sbjct: 364 PREPQGPAMSTHEVLVLWGT*ATFSARRLNHQC*CTIMTRIALKVRTW 507
Score = 165 bits (355), Expect(2) = 1e-060
Identities = 77/104 (74%), Positives = 83/104 (79%)
Frame = +2 / +2
Query: 515 EQVVSNCSAAARED***DQESMELVHQEEAEAERH*SQHPQATY*GXXXXXXXXXXXXEN 694
+QVVSNCS AARED***DQESMELVHQEEAEAERH*SQHPQA Y*G EN
Sbjct: 194 KQVVSNCSTAARED***DQESMELVHQEEAEAERH*SQHPQAPY*G*SQRSSSHRHHREN 373
Query: 695 LRVQRHQPIKHWSSGELEPPPQRDGSIINADARVRQESC*NTKL 826
LRVQR QP+K W SGELEPP QRDGSIINADA++ QES * ++L
Sbjct: 374 LRVQRCQPMKCWCSGELEPPSQRDGSIINADAQL*QESH*KSEL 505
Score = 127 bits (271), Expect(2) = 1e-051
Identities = 62/104 (59%), Positives = 62/104 (59%)
Frame = -1 / -1
Query: 828 PSLVFQHDSCRTRASALMIEPSRXXXXXXSPEDQCLMG*CRWTLRFSRC*WWELHRRDQP 649
PS FQ DSC ASALMIEPSR SPE Q MG* RWTLRFSR * WEL R DQP
Sbjct: 507 PSSDFQCDSCHNCASALMIEPSR*EGGSSSPEHQHFMG*HRWTLRFSRW*RWELLRCDQP 328
Query: 648 Q*VACGCWDQCLXXXXXXXXXXXXXXXXXXXXSLAAALQFETTC 517
Q* ACGCWDQCL SLAA LQFETTC
Sbjct: 327 Q*GACGCWDQCLSASASS*CTSSIDS*SHYQSSLAAVLQFETTC 196
Score = 99.6 bits (211), Expect(2) = 1e-051
Identities = 43/47 (91%), Positives = 44/47 (93%)
Frame = -1 / -1
Query: 465 MPLS*GLASDSLSTSAYNSFRTFEAQRVWEQSSSSHGHALLCDS*VS 325
MPLS*GLASDSLSTSAYNSFR F AQRVWEQ+SSSHGHALLCDS* S
Sbjct: 144 MPLS*GLASDSLSTSAYNSFRIFGAQRVWEQNSSSHGHALLCDS*AS 4
Score = 90.9 bits (192), Expect(2) = 1e-060
Identities = 35/39 (89%), Positives = 36/39 (92%)
Frame = +2 / +2
Query: 326 ETHESHNKAWPWLLELCSQTRWASKVRKEL*AEVDKLSE 442
E HESHNKAWPWLLE CSQTRWA K+RKEL*AEVDKLSE
Sbjct: 5 EAHESHNKAWPWLLEFCSQTRWAPKMRKEL*AEVDKLSE 121
>gb|BI075197.1|BI075197 IP1_17_C12.b1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 638
Score = 174 bits (375), Expect(3) = e-100
Identities = 72/88 (81%), Positives = 75/88 (85%)
Frame = +1 / +1
Query: 1330 LTPLPKRPQSCRTRAKRFMMM*SRQRANST*KGYVLLGSRISSHSNSCR*HQTCMTRTCK 1509
+ PLP+RPQ CRTRA+R MM *SRQRANS KGYVLLGSRIS HSNSCR H TCMTRTCK
Sbjct: 208 MEPLPRRPQPCRTRARRSMMT*SRQRANSAWKGYVLLGSRISRHSNSCRLHPTCMTRTCK 387
Query: 1510 ECNYLLRISRHYVPPHGTEQIRRSRNSY 1593
ECN LLRISRHYVPPHGTE I RSRN Y
Sbjct: 388 ECNCLLRISRHYVPPHGTELISRSRNLY 471
Score = 167 bits (360), Expect(3) = 1e-089
Identities = 69/90 (76%), Positives = 77/90 (85%)
Frame = +3 / +3
Query: 1335 SFAETTTVMQNQSQTLYDDVIKAESQFNIEGICASWFXXXXXXXXXXVAPDMYDKDLQRM 1514
+FAETTT MQNQSQTLYDDVIKAESQF++EGICASWF AP+MYDKDLQRM
Sbjct: 213 TFAETTTAMQNQSQTLYDDVIKAESQFSMEGICASWFQNQQTQQQLQAAPNMYDKDLQRM 392
Query: 1515 QLSFENI*ALCSTTWNRADQKKQKLVFSEI 1604
QLSFENI*ALCST+WNRADQ+KQKLVF ++
Sbjct: 393 QLSFENI*ALCSTSWNRADQQKQKLVFRDL 482
Score = 167 bits (359), Expect(3) = 1e-093
Identities = 74/88 (84%), Positives = 75/88 (85%)
Frame = -3 / -2
Query: 1600 SENTSFCFF*SALFHVVEHNA*IFSKDSCILCKSLSYMSGATXXXXXXX*FWNQEAHIPS 1421
S NTSFCF *SALFH VEH+A*IFSKDSCILCKSLSYM GA *FWNQEAHIPS
Sbjct: 478 SLNTSFCFC*SALFHEVEHSA*IFSKDSCILCKSLSYMLGAACSCCCVC*FWNQEAHIPS 299
Query: 1420 MLNWLSALITSS*SVWLWFCMTVVVSAK 1337
MLNWLSALITSS*SVWLWFCM VVVSAK
Sbjct: 298 MLNWLSALITSS*SVWLWFCMAVVVSAK 215
Score = 155 bits (334), Expect(3) = 8e-058
Identities = 68/88 (77%), Positives = 72/88 (81%)
Frame = +2 / +2
Query: 1337 LCRNDHSHAEPEPNAL**CDQGREPIQHRRDMCFLVPESXXXXXXXGSTRHV*QGLAKNA 1516
LCR+DHSHAEPEP+AL** DQGREPIQH RDMCFLVPES G T+HV*QGLAKNA
Sbjct: 215 LCRDDHSHAEPEPDAL**RDQGREPIQHGRDMCFLVPESADTATAAGCTQHV*QGLAKNA 394
Query: 1517 TIF*EYLGIMFHHMEQSRSEEAETRIFR 1600
T+F*EYLG MFH MEQS S EAET I R
Sbjct: 395 TVF*EYLGTMFHLMEQS*SAEAETCIQR 478
Score = 154 bits (331), Expect(3) = 2e-084
Identities = 67/89 (75%), Positives = 72/89 (80%)
Frame = -1 / -3
Query: 1602 SLKIRVSASSDLLCSMWWNIMPRYSQKIVAFFASPCHTCLVLPXXXXXXADSGTKKHISL 1423
+L I+VSAS+D LCSM WNI+PRYSQK VAFFASPCHTC V P ADSGTKKHISL
Sbjct: 480 NL*IQVSASADQLCSMRWNIVPRYSQKTVAFFASPCHTCWVQPAAVAVSADSGTKKHISL 301
Query: 1422 LC*IGSLP*SHHHKAFGSGSA*LWSFRQR 1336
C*IGSLP*S HH+A GSGSA LWS RQR
Sbjct: 300 PC*IGSLP*SRHHRASGSGSAWLWSSRQR 214
Score = 147 bits (316), Expect(3) = 1e-080
Identities = 65/87 (74%), Positives = 70/87 (80%)
Frame = -2 / -1
Query: 1595 KYEFLLLLICSVPCGGT*CLDILKR*LHSLQVLVIHVWCYXXXXXXXXXLEPRSTYPFYV 1416
+Y+FLLLLI SVP GGT*CLDILKR LHSLQVLVIHV C LEPRSTYPF+
Sbjct: 473 EYKFLLLLISSVP*GGT*CLDILKRQLHSLQVLVIHVGCSLQLLLCLLILEPRSTYPFHA 294
Query: 1415 ELALCLDHIIIKRLALVLHDCGRFGKG 1335
ELALCLDH+II+RLALVLH CGR GKG
Sbjct: 293 ELALCLDHVIIERLALVLHGCGRLGKG 213
Score = 119 bits (254), Expect(3) = e-100
Identities = 46/64 (71%), Positives = 48/64 (75%)
Frame = +3 / +3
Query: 1143 VDSFYWDGTNPXXXXXXXXXXXXXXXFEPQSTSTILENSVFPWTDIGQEKDTRAHLVAEL 1322
VDSFYWDGTNP FEPQSTS+ILENSVFPWT+IGQEKDTRAHLV EL
Sbjct: 9 VDSFYWDGTNPSSSSSTGSRGSNSMGFEPQSTSSILENSVFPWTNIGQEKDTRAHLVEEL 188
Query: 1323 KWPD 1334
KWPD
Sbjct: 189 KWPD 200
Score = 115 bits (246), Expect(3) = 1e-093
Identities = 47/55 (85%), Positives = 51/55 (92%)
Frame = -2 / -3
Query: 1760 EHTFLCILLQLLMPGLSFP*YCQLFN*GTAVEDDFCINLTYLCEQFSIILPTNL* 1596
E TFLCILL LLMPGLSFP*YCQ+FN*GTAVED+ CINL YLC+QFSI+LPTNL*
Sbjct: 636 ERTFLCILLPLLMPGLSFP*YCQVFN*GTAVEDNLCINLMYLCKQFSIVLPTNL* 472
Score = 115 bits (245), Expect(3) = e-100
Identities = 47/55 (85%), Positives = 50/55 (90%)
Frame = +1 / +2
Query: 1597 QRFVGRIMLNCSHRYVKLIQKSSSTAVPQLKSWQYQGKDSPGIRSCSRMHRKVCS 1761
QRFVGR MLNC HRY+KLIQ+ SSTAVPQLK+WQYQGKDSPGIRS SRMHRKV S
Sbjct: 473 QRFVGRTMLNCLHRYIKLIQRLSSTAVPQLKTWQYQGKDSPGIRSGSRMHRKVRS 637
Score = 111 bits (238), Expect = 3e-023
Identities = 48/63 (76%), Positives = 55/63 (87%)
Frame = +2 / +3
Query: 1574 EEAETRIFRDSWAELC*IAHIDTLS*YRNHPPQLFLS*RAGNIKERTALALEVAAGCIGK 1753
++ + +FRD W ELC*IA+IDTLS*YR++PPQLFLS*R GNIKERTALALEVAA CI K
Sbjct: 450 QQKQKLVFRDLWEELC*IAYIDTLS*YRDYPPQLFLS*RPGNIKERTALALEVAAECIEK 629
Query: 1754 YVL 1762
YVL
Sbjct: 630 YVL 638
Score = 109 bits (233), Expect(3) = 2e-084
Identities = 47/56 (83%), Positives = 51/56 (91%)
Frame = -3 / -1
Query: 1762 *NILSYASCCNF*CQGCPFLDIASSSTEEQLWRMISVST*RIYVSNSA*FCPRISE 1595
*N+L YA CC+F*CQGCPFLDIA SSTEEQLWR+ISVST* IYVSNSA*F P+ISE
Sbjct: 638 *NVLFYAFCCHF*CQGCPFLDIARSSTEEQLWRIISVST*CIYVSNSA*FFPQISE 471
Score = 109 bits (233), Expect(3) = 1e-080
Identities = 48/55 (87%), Positives = 51/55 (92%)
Frame = -1 / -2
Query: 1761 RTYFPMHPAATSNARAVLSLILPALQLRNSCGG*FLYQLNVSM*AIQHNSAHESL 1597
RTYF MH AATSNARAVLSLILP LQLRNSCGG* LYQLNVSM*AIQH+S+H+SL
Sbjct: 637 RTYFSMHSAATSNARAVLSLILPGLQLRNSCGG*SLYQLNVSM*AIQHSSSHKSL 473
Score = 105 bits (223), Expect(3) = 1e-089
Identities = 46/59 (77%), Positives = 54/59 (91%)
Frame = +3 / +1
Query: 1578 KQKLVFSEIRGQNYAELLT*IR*VDTEIILHSCSSVEELAISRKGQPWH*KLQQDA*ES 1754
+ + ++SEI G+NYAELLT*I *VDTEIILHSCSSVE+LAISRKGQPWH*K QQ+A*+S
Sbjct: 454 RSRNLYSEICGKNYAELLT*IH*VDTEIILHSCSSVEDLAISRKGQPWH*KWQQNA*KS 630
Score = 103 bits (219), Expect(3) = 1e-093
Identities = 44/64 (68%), Positives = 46/64 (71%)
Frame = -2 / -1
Query: 1334 VRPLKFRY*VSPCIFFLSNVCPWEDTVLQNCARALWFKSHTVXXXXXXXXXXXXXXXXPV 1155
VRPLKF Y*VSPCIFFLS+VCPWEDTVLQN ARALWFK+HTV PV
Sbjct: 200 VRPLKFLY*VSPCIFFLSDVCPWEDTVLQN*ARALWFKAHTVASSAPSTATAARISTIPV 21
Query: 1154 E*IY 1143
E*IY
Sbjct: 20 E*IY 9
Score = 99.6 bits (211), Expect(3) = 1e-089
Identities = 45/64 (70%), Positives = 45/64 (70%)
Frame = +1 / +1
Query: 1144 *IHSTXXXXXXXXXXXXXXXXXTVWDLNHRARAQFWRTVSSHGQTLDKKKIQGLT**RNL 1323
*IHST TVW LNHRARAQFWRTVSSHGQT DKKKIQGLT**RNL
Sbjct: 10 *IHSTGMVLILAAVAVLGAEEATVWALNHRARAQFWRTVSSHGQTSDKKKIQGLT**RNL 189
Query: 1324 SGLT 1335
SGLT
Sbjct: 190 SGLT 201
Score = 91.3 bits (193), Expect(3) = 2e-084
Identities = 38/44 (86%), Positives = 39/44 (88%)
Frame = -1 / -3
Query: 1347 FRQRSQAT*VPLLGEPLYLFLVQCLSMGRHCSPELCSCSVVQIP 1216
F SQAT*VPLLGEPLYLFLV+CLSMGRHCSPEL SCSVVQ P
Sbjct: 213 FHGASQAT*VPLLGEPLYLFLVRCLSMGRHCSPELSSCSVVQSP 82
Score = 84.9 bits (179), Expect(3) = 1e-080
Identities = 36/41 (87%), Positives = 38/41 (92%)
Frame = -3 / -2
Query: 1336 ESGHLSSATR*ALVSFSCPMSVHGKTLFSRIVLVLCGSNPI 1214
+SGHLSS+TR*ALVSFSCPM VHGKTLFSRI LVLCGS PI
Sbjct: 202 KSGHLSSSTR*ALVSFSCPMFVHGKTLFSRIELVLCGSKPI 80
Score = 83.1 bits (175), Expect(3) = 8e-058
Identities = 35/40 (87%), Positives = 37/40 (92%)
Frame = +2 / +2
Query: 1217 GI*TTEHEHNSGEQCLPMDRHWTRKRYKGSPSSGT*VA*L 1336
G+*TTEHE NSGEQCLPMD+H TRKRYKGSPS GT*VA*L
Sbjct: 83 GL*TTEHELNSGEQCLPMDKHRTRKRYKGSPSRGT*VA*L 202
Score = 26.7 bits (52), Expect(3) = 8e-058
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = +2 / +2
Query: 1145 RFILLGWY*S 1174
RFILLGWY*S
Sbjct: 11 RFILLGWY*S 40
>gb|CW036402.1|CW036402 104_267_10503738_114_30374 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10503738, DNA
sequence
Length = 759
Score = 337 bits (730), Expect(2) = 9e-098
Identities = 142/205 (69%), Positives = 164/205 (80%)
Frame = +3 / +3
Query: 516 NRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPNTHKPLTEADHGGAAPTISTERT 695
NRWSQIA +LPGRTDNEIKNLWNS IKKKLRQKGIDPNTHKPL E +H AAPTISTERT
Sbjct: 144 NRWSQIATRLPGRTDNEIKNLWNSSIKKKLRQKGIDPNTHKPLAEVEHSKAAPTISTERT 323
Query: 696 SGSSDINPSSTGPLGNLSPLLSETAQSSMLMPVYDKNRAETPNLARPKLPPKELFLEQLT 875
S SSD++PSS G LGNLS LLSETAQS L+PV K+R ET +LA ++PPKELFL+QL
Sbjct: 324 SESSDVDPSSGGALGNLSHLLSETAQSPELLPVLGKHRKETTSLAHLRVPPKELFLDQLV 503
Query: 876 AGHESPSTCHSSGQTLYFPFQQPLGYNSESGSSDGANMNSLWFNQSDFNCSTISTVMPPV 1055
+GHE+ ++C S+G FPFQQ + YN+E G +G + NS WFNQ++ + STISTVMPPV
Sbjct: 504 SGHENLTSCRSTGPIPNFPFQQLMCYNNEFGHKNGGSNNSFWFNQNESSGSTISTVMPPV 683
Query: 1056 SPSALSTSMGLNLPPDNPRHGGTGI 1130
SPS LSTS GLN PDNP GGTGI
Sbjct: 684 SPSTLSTSTGLNGSPDNPHSGGTGI 758
Score = 187 bits (402), Expect(2) = 1e-064
Identities = 92/142 (64%), Positives = 99/142 (69%)
Frame = -3 / -3
Query: 940 CWKGK*RVWPDEWQVDGLSCPAVSCSRNSSFGGSLGRAKFGVSARFLSYTGISIDD*AVS 761
CWKGK + P E Q+ S P S SRN+SFGG+L AK VS R L TG S D AVS
Sbjct: 568 CWKGKFGIGPVERQLVRFS*PETSWSRNNSFGGTLRCAKLVVSLRCLPSTGSSSGDCAVS 389
Query: 760 LRRGLKFPRGPVLDGLMSLDPEVLSVLMVGAAPP*SASVSGLWVLGSMPFCLSFFLMHEF 581
LRR LK P P L+G SLD EVLSVL+VGAA S S GLWVLGSMPFC SFFLM EF
Sbjct: 388 LRRWLKLPSAPPLEGSTSLDSEVLSVLIVGAALLCSTSARGLWVLGSMPFCRSFFLMLEF 209
Query: 580 HRFLISLSVLPGSCAAI*DHLF 515
RFLISLSVLPG+ AI*DHLF
Sbjct: 208 QRFLISLSVLPGNLVAI*DHLF 143
Score = 180 bits (387), Expect = 8e-044
Identities = 97/198 (48%), Positives = 114/198 (57%)
Frame = +1 / +1
Query: 535 QRSCQGGLIMRSRIYGTRASRRS*GRKALIPTPTSHLLRLITAVQLPPSAPREPQGPATS 714
Q+ C LI R RI GT+ASRRS GRKA PTPTS L RL TA Q S REP P
Sbjct: 163 QQGCLEELITRLRISGTQASRRSSGRKASTPTPTSPLPRLNTAKQRQQSVLREPLSPVML 342
Query: 715 THQALVLWGT*APSSARRLNHQC*CPCTTRIVLKHQTWHALSCHQRSCSWSSLLLDTRVH 894
T Q +V T*A SAR+ NHQ C C+ I K WH C +RS S +SL L +
Sbjct: 343 TLQVVVHLAT*AIFSARQHNHQSCCQCSVSIAKKLLAWHIXGCRRRSYSLTSLFLVMKTS 522
Query: 895 QPATHQAKLSISLSNSP*ATTVRVAAAMGRI*IHSGSTRVTSTAAQFLQ*CRQFHHRPSL 1074
A QA+ ISLS+S ATT+ +A M + IHSG TR++ AA F *C QFHH+ S
Sbjct: 523 LAAAQQAQFQISLSSS*CATTMNLATRMVVVTIHSGLTRMSQVAAPFPP*CHQFHHQLSQ 702
Query: 1075 HQWG*IFHLIILDMEELA 1128
HQ G + H II E LA
Sbjct: 703 HQQGSMGHQIIHTREALA 756
Score = 124 bits (265), Expect(2) = 4e-036
Identities = 69/143 (48%), Positives = 81/143 (56%)
Frame = +2 / +2
Query: 515 EQVVSNCSAAARED***DQESMELVHQEEAEAERH*SQHPQATY*GXXXXXXXXXXXXEN 694
EQVVS+C+ A ++** D ES+EL HQEEA AERH QHPQA G EN
Sbjct: 143 EQVVSDCNKVAWKN**RD*ESLELKHQEEAPAERHRPQHPQAPCRG*TQQSSANNQY*EN 322
Query: 695 LRVQRHQPIKHWSSGELEPPPQRDGSIINADARVRQESC*NTKLGTP*AATKGAVPGAAY 874
L VQ P K W + +LEP QRD +I A A R S N LGT A +G +P A
Sbjct: 323 L*VQ*C*PFKWWCTWQLEPSSQRDSTITRAAASAR*ASQRNY*LGTSXGAAEGVIP*PAC 502
Query: 875 CWTRESINLPLIRPNSLFPFPTA 943
W+ + LPL RPNS FPFP A
Sbjct: 503 FWS*KPH*LPLNRPNSKFPFPAA 571
Score = 106 bits (227), Expect(2) = 2e-031
Identities = 56/105 (53%), Positives = 68/105 (64%)
Frame = -2 / -2
Query: 830 CQVWCFSTILVVHGHQH**LSRLAEEGAQVPQRTSA*WVDVAGP*GSLGADGGSCTAVIS 651
CQ F +L H Q *L LAE+ AQV + T+ * V++ G GSL D C AV +
Sbjct: 458 CQASSFFAMLTEHWQQLW*LCCLAEKMAQVAKCTTT*RVNITGLRGSLSTDCWRCFAVFN 279
Query: 650 LSKWLVGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPV 516
L K LVGVG++AFLP+LLLDA VP IL+L+IS Q CNLRPPV
Sbjct: 278 LGKGLVGVGVDAFLPELLLDA*VPEILNLVISSSRQPCCNLRPPV 144
Score = 83.1 bits (175), Expect(2) = 1e-064
Identities = 34/48 (70%), Positives = 38/48 (79%)
Frame = -3 / -3
Query: 1129 MPVPPCRGLSGGRFSPIDVERADGETGGITVEIVLQLKSLWLNQSEFI 986
MPVPP GLSG SP+DVER DGETGGITVE+VL L S WLNQ+E +
Sbjct: 757 MPVPPECGLSGDPLSPVDVERVDGETGGITVEMVLPLDSFWLNQNELL 614
Score = 51.9 bits (107), Expect(2) = 2e-031
Identities = 35/77 (45%), Positives = 40/77 (51%)
Frame = -2 / -2
Query: 1130 NASSSMSRIIRWKIQPH*CREGRW*NWRHHCRNCAAVEVTLVEPE*IHIRPIXXXXXXXX 951
NAS+S II I+P *C E W*NW HH N AA + LV+PE*I I
Sbjct: 758 NASASRVWIIW*PIEPC*C*ES*W*NWWHHGGNGAAT*LILVKPE*IVTTTILVAKFIVV 579
Query: 950 XXXXLEREIESLA**VA 900
LEREI + A * A
Sbjct: 578 AHQLLEREIWNWAC*AA 528
Score = 50.1 bits (103), Expect(2) = 4e-036
Identities = 22/47 (46%), Positives = 29/47 (61%)
Frame = +2 / +2
Query: 989 EFTLVQPE*LQLQHNFYSDAASFTIGPLYINGAEXXXXXXXXWRNWH 1129
+F LV PE*++ QH+F+ DA SFTI L IN A+ R+WH
Sbjct: 617 QFILV*PE*VKWQHHFHRDATSFTINSLNINRAQWVTR*STLGRHWH 757
Score = 43.2 bits (88), Expect(3) = 6e-012
Identities = 27/61 (44%), Positives = 32/61 (52%)
Frame = -1 / -1
Query: 942 AVGKGNREFGLMSGRLMDSRVQQ*AAPGTAPLVAA*GVPSLVFQHDSCRTRASALMIEPS 763
A GKGN E GL+SG Q+ A G P A VPS F D+ R A+AL+I S
Sbjct: 570 AAGKGNLELGLLSGS**GFHDQKQAGQGITPSAAPXDVPS**FLCDAYRALAAALVIVLS 391
Query: 762 R 760
R
Sbjct: 390 R 388
Score = 43.2 bits (88), Expect(2) = 9e-098
Identities = 17/19 (89%), Positives = 19/19 (100%)
Frame = +3 / +1
Query: 465 FAQDEEDLIIELHAVLGNR 521
F+Q+EEDLIIELHAVLGNR
Sbjct: 1 FSQEEEDLIIELHAVLGNR 57
Score = 37.7 bits (76), Expect(3) = 6e-012
Identities = 18/37 (48%), Positives = 21/37 (56%)
Frame = -1 / -1
Query: 723 LMG*CRWTLRFSRC*WWELHRRDQPQ*VACGCWDQCL 613
L G WT RFS+ * L QP+ ACGCW +CL
Sbjct: 351 LKGQHHWTQRFSQY*LLALLCCVQPRQGACGCWGRCL 241
Score = 29.0 bits (57), Expect(3) = 6e-012
Identities = 19/47 (40%), Positives = 22/47 (46%)
Frame = -1 / -1
Query: 1131 QCQFLHVEDYQVEDSAPLM*RGPMVXXXXXXXXXXXXXSHSG*TRVN 991
+CQ L DY V A LM R MV +HSG*TR+N
Sbjct: 759 ECQCLPSVDYLVTH*ALLMLRELMVKLVASRWKWCCHLTHSG*TRMN 619
>gb|CL151120.1|CL151120 104_333_10779023_116_31360_191 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10779023, DNA
sequence
Length = 714
Score = 311 bits (673), Expect(2) = 5e-092
Identities = 132/193 (68%), Positives = 153/193 (79%)
Frame = +3 / +3
Query: 552 RTDNEIKNLWNSCIKKKLRQKGIDPNTHKPLTEADHGGAAPTISTERTSGSSDINPSSTG 731
RTDNEIKNLWNS IKKKLRQKGIDPNTHKPL E +H AAPTISTERTS SSD++PSS G
Sbjct: 3 RTDNEIKNLWNSSIKKKLRQKGIDPNTHKPLAEVEHSKAAPTISTERTSESSDVDPSSGG 182
Query: 732 PLGNLSPLLSETAQSSMLMPVYDKNRAETPNLARPKLPPKELFLEQLTAGHESPSTCHSS 911
LGNLS LLSETAQS L+PV K+R ET +LA ++PPKELFL+QL +GHE+ ++C S+
Sbjct: 183 ALGNLSHLLSETAQSPELLPVLGKHRKETTSLAHLRVPPKELFLDQLVSGHENLTSCRST 362
Query: 912 GQTLYFPFQQPLGYNSESGSSDGANMNSLWFNQSDFNCSTISTVMPPVSPSALSTSMGLN 1091
G FPFQQ + YN+E G +G + NS WFNQ++ + STISTVMPPVSPS LSTS GLN
Sbjct: 363 GPIPNFPFQQLMCYNNEFGHKNGGSNNSFWFNQNESSGSTISTVMPPVSPSTLSTSTGLN 542
Query: 1092 LPPDNPRHGGTGI 1130
PDNP GGTGI
Sbjct: 543 GSPDNPHSGGTGI 581
Score = 176 bits (378), Expect(2) = 1e-047
Identities = 95/194 (48%), Positives = 112/194 (57%)
Frame = +1 / +1
Query: 556 LIMRSRIYGTRASRRS*GRKALIPTPTSHLLRLITAVQLPPSAPREPQGPATSTHQALVL 735
LI R RI GT+ASRRS GRKA PTPTS L RL TA Q S REP P T Q +V
Sbjct: 7 LITRLRISGTQASRRSSGRKASTPTPTSPLPRLNTAKQRQQSVLREPLSPVMLTLQVVVH 186
Query: 736 WGT*APSSARRLNHQC*CPCTTRIVLKHQTWHALSCHQRSCSWSSLLLDTRVHQPATHQA 915
T*A SAR+ NHQ C C+ I K WH C +RS S +SL L + A QA
Sbjct: 187 LAT*AIFSARQHNHQSCCQCSVSIAKKLLAWHI*GCRRRSYSLTSLFLVMKTSLAAAQQA 366
Query: 916 KLSISLSNSP*ATTVRVAAAMGRI*IHSGSTRVTSTAAQFLQ*CRQFHHRPSLHQWG*IF 1095
+ ISLS+S ATT+ +A M + IHSG TR++ AA F *C QFHH+ S HQ G +
Sbjct: 367 QFQISLSSS*CATTMNLATRMVVVTIHSGLTRMSQVAAPFPP*CHQFHHQLSQHQQGSMG 546
Query: 1096 HLIILDMEELALEV 1137
H II E LA +
Sbjct: 547 HQIIHTREALAFRI 588
Score = 166 bits (356), Expect(3) = 4e-063
Identities = 83/130 (63%), Positives = 89/130 (68%)
Frame = -3 / -3
Query: 940 CWKGK*RVWPDEWQVDGLSCPAVSCSRNSSFGGSLGRAKFGVSARFLSYTGISIDD*AVS 761
CWKGK + P E Q+ S P S SRN+SFGG+L AK VS R L TG S D AVS
Sbjct: 391 CWKGKFGIGPVERQLVRFS*PETSWSRNNSFGGTLRCAKLVVSLRCLPSTGSSSGDCAVS 212
Query: 760 LRRGLKFPRGPVLDGLMSLDPEVLSVLMVGAAPP*SASVSGLWVLGSMPFCLSFFLMHEF 581
LRR LK P P L+G SLD EVLSVL+VGAA S S GLWVLGSMPFC SFFLM EF
Sbjct: 211 LRRWLKLPSAPPLEGSTSLDSEVLSVLIVGAALLCSTSARGLWVLGSMPFCRSFFLMLEF 32
Query: 580 HRFLISLSVL 551
RFLISLSVL
Sbjct: 31 QRFLISLSVL 2
Score = 109 bits (232), Expect(3) = 2e-033
Identities = 60/126 (47%), Positives = 68/126 (53%)
Frame = +2 / +2
Query: 566 DQESMELVHQEEAEAERH*SQHPQATY*GXXXXXXXXXXXXENLRVQRHQPIKHWSSGEL 745
D ES+EL HQEEA AERH QHPQA G ENL VQ P K W + +L
Sbjct: 17 D*ESLELKHQEEAPAERHRPQHPQAPCRG*TQQSSANNQY*ENL*VQ*C*PFKWWCTWQL 196
Query: 746 EPPPQRDGSIINADARVRQESC*NTKLGTP*AATKGAVPGAAYCWTRESINLPLIRPNSL 925
EP QRD +I A A R S N LGT A +G +P A W+ + LPL RPNS
Sbjct: 197 EPSSQRDSTITRAAASAR*ASQRNY*LGTSKGAAEGVIP*PACFWS*KPH*LPLNRPNSK 376
Query: 926 FPFPTA 943
FPFP A
Sbjct: 377 FPFPAA 394
Score = 90.4 bits (191), Expect(3) = 2e-029
Identities = 48/92 (52%), Positives = 60/92 (65%)
Frame = -2 / -2
Query: 830 CQVWCFSTILVVHGHQH**LSRLAEEGAQVPQRTSA*WVDVAGP*GSLGADGGSCTAVIS 651
CQ F +L H Q *L LAE+ AQV + T+ * V++ G GSL D C AV +
Sbjct: 281 CQASSFFAMLTEHWQQLW*LCCLAEKMAQVAKCTTT*RVNITGLRGSLSTDCWRCFAVFN 102
Query: 650 LSKWLVGVGINAFLPQLLLDARVP*ILDLIIS 555
L K LVGVG++AFLP+LLLDA VP IL+L+IS
Sbjct: 101 LGKGLVGVGVDAFLPELLLDA*VPEILNLVIS 6
Score = 83.1 bits (175), Expect(3) = 4e-063
Identities = 34/48 (70%), Positives = 38/48 (79%)
Frame = -3 / -3
Query: 1129 MPVPPCRGLSGGRFSPIDVERADGETGGITVEIVLQLKSLWLNQSEFI 986
MPVPP GLSG SP+DVER DGETGGITVE+VL L S WLNQ+E +
Sbjct: 580 MPVPPECGLSGDPLSPVDVERVDGETGGITVEMVLPLDSFWLNQNELL 437
Score = 51.9 bits (107), Expect(3) = 2e-029
Identities = 35/77 (45%), Positives = 40/77 (51%)
Frame = -2 / -2
Query: 1130 NASSSMSRIIRWKIQPH*CREGRW*NWRHHCRNCAAVEVTLVEPE*IHIRPIXXXXXXXX 951
NAS+S II I+P *C E W*NW HH N AA + LV+PE*I I
Sbjct: 581 NASASRVWIIW*PIEPC*C*ES*W*NWWHHGGNGAAT*LILVKPE*IVTTTILVAKFIVV 402
Query: 950 XXXXLEREIESLA**VA 900
LEREI + A * A
Sbjct: 401 AHQLLEREIWNWAC*AA 351
Score = 50.1 bits (103), Expect(2) = 5e-092
Identities = 18/40 (45%), Positives = 22/40 (55%)
Frame = +3 / +3
Query: 1152 FYWDGTNPXXXXXXXXXXXXXXXFEPQSTSTILENSVFPW 1271
FYW+ NP FE QSTS++LE+SVFPW
Sbjct: 594 FYWETANPSSSSSRGSSGSNSLGFERQSTSSLLESSVFPW 713
Score = 50.1 bits (103), Expect(3) = 2e-033
Identities = 22/47 (46%), Positives = 29/47 (61%)
Frame = +2 / +2
Query: 989 EFTLVQPE*LQLQHNFYSDAASFTIGPLYINGAEXXXXXXXXWRNWH 1129
+F LV PE*++ QH+F+ DA SFTI L IN A+ R+WH
Sbjct: 440 QFILV*PE*VKWQHHFHRDATSFTINSLNINRAQWVTR*STLGRHWH 580
Score = 43.2 bits (88), Expect(3) = 4e-013
Identities = 27/61 (44%), Positives = 32/61 (52%)
Frame = -1 / -1
Query: 942 AVGKGNREFGLMSGRLMDSRVQQ*AAPGTAPLVAA*GVPSLVFQHDSCRTRASALMIEPS 763
A GKGN E GL+SG Q+ A G P A VPS F D+ R A+AL+I S
Sbjct: 393 AAGKGNLELGLLSGS**GFHDQKQAGQGITPSAAPLDVPS**FLCDAYRALAAALVIVLS 214
Query: 762 R 760
R
Sbjct: 213 R 211
Score = 37.7 bits (76), Expect(3) = 4e-013
Identities = 18/37 (48%), Positives = 21/37 (56%)
Frame = -1 / -1
Query: 723 LMG*CRWTLRFSRC*WWELHRRDQPQ*VACGCWDQCL 613
L G WT RFS+ * L QP+ ACGCW +CL
Sbjct: 174 LKGQHHWTQRFSQY*LLALLCCVQPRQGACGCWGRCL 64
Score = 37.3 bits (75), Expect(2) = 1e-047
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = +1 / +1
Query: 1210 TVWDLNHRARAQFWRTVSSHG 1272
T WDL+ +A+A FW+ V SHG
Sbjct: 652 TAWDLSGKAQAHFWKVVFSHG 714
Score = 34.5 bits (69), Expect(3) = 4e-063
Identities = 14/18 (77%), Positives = 14/18 (77%)
Frame = -3 / -3
Query: 1270 HGKTLFSRIVLVLCGSNP 1217
HGKTL SR LVLC SNP
Sbjct: 712 HGKTLLSRSELVLCRSNP 659
Score = 33.1 bits (66), Expect(3) = 4e-013
Identities = 21/53 (39%), Positives = 25/53 (47%)
Frame = -1 / -1
Query: 1149 NLLRYFQCQFLHVEDYQVEDSAPLM*RGPMVXXXXXXXXXXXXXSHSG*TRVN 991
N + Y +CQ L DY V A LM R MV +HSG*TR+N
Sbjct: 600 NRIGYSECQCLPSVDYLVTH*ALLMLRELMVKLVASRWKWCCHLTHSG*TRMN 442
Score = 27.6 bits (54), Expect(3) = 2e-029
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = -1 / -1
Query: 1272 SMGRHCSPELCSCSVVQIP 1216
SMG+H PE+ C QIP
Sbjct: 714 SMGKHYFPEVSLCFAAQIP 658
Score = 24.0 bits (46), Expect(3) = 2e-033
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = +2 / +2
Query: 1217 GI*TTEHEHNSGEQCLPM 1270
GI* +H+ SG+ C PM
Sbjct: 659 GI*AAKHKLTSGK*CFPM 712
>gb|CW103828.1|CW103828 104_472_11012098_148_34437_037 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11012098, DNA
sequence
Length = 623
Score = 325 bits (704), Expect = 1e-087
Identities = 138/201 (68%), Positives = 160/201 (79%)
Frame = +3 / +3
Query: 528 QIAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPNTHKPLTEADHGGAAPTISTERTSGSS 707
QIA +LPGRTDNEIKNLWNS IKKKLRQKGIDPNTHKPL E +H AAPTISTERTS SS
Sbjct: 3 QIATRLPGRTDNEIKNLWNSSIKKKLRQKGIDPNTHKPLAEVEHSKAAPTISTERTSESS 182
Query: 708 DINPSSTGPLGNLSPLLSETAQSSMLMPVYDKNRAETPNLARPKLPPKELFLEQLTAGHE 887
D++PSS G LGNLS LLSETAQS L+PV K+R ET +LA ++PPKELFL+QL +GHE
Sbjct: 183 DVDPSSGGALGNLSHLLSETAQSPELLPVLGKHRKETTSLAHLRVPPKELFLDQLVSGHE 362
Query: 888 SPSTCHSSGQTLYFPFQQPLGYNSESGSSDGANMNSLWFNQSDFNCSTISTVMPPVSPSA 1067
+ ++C S+G FPFQQ + YN+E G +G + NS WFNQ++ + STISTVMPPVSPS
Sbjct: 363 NLTSCRSTGPIPNFPFQQLMCYNNEFGHKNGGSNNSFWFNQNESSGSTISTVMPPVSPST 542
Query: 1068 LSTSMGLNLPPDNPRHGGTGI 1130
LSTS GLN PDNP GGTGI
Sbjct: 543 LSTSTGLNGSPDNPHSGGTGI 605
Score = 180 bits (387), Expect = 8e-044
Identities = 97/201 (48%), Positives = 115/201 (57%)
Frame = +1 / +1
Query: 535 QRSCQGGLIMRSRIYGTRASRRS*GRKALIPTPTSHLLRLITAVQLPPSAPREPQGPATS 714
Q+ C LI R RI GT+ASRRS GRKA PTPTS L RL TA Q S REP P
Sbjct: 10 QQGCLEELITRLRISGTQASRRSSGRKASTPTPTSPLPRLNTAKQRQQSVLREPLSPVML 189
Query: 715 THQALVLWGT*APSSARRLNHQC*CPCTTRIVLKHQTWHALSCHQRSCSWSSLLLDTRVH 894
T Q +V T*A SAR+ NHQ C C+ I K WH C +RS S +SL L +
Sbjct: 190 TLQVVVHLAT*AIFSARQHNHQSCCQCSVSIAKKLLAWHI*GCRRRSYSLTSLFLVMKTS 369
Query: 895 QPATHQAKLSISLSNSP*ATTVRVAAAMGRI*IHSGSTRVTSTAAQFLQ*CRQFHHRPSL 1074
A QA+ ISLS+S ATT+ +A M + IHSG TR++ AA F *C QFHH+ S
Sbjct: 370 LAAAQQAQFQISLSSS*CATTMNLATRMVVVTIHSGLTRMSQVAAPFPP*CHQFHHQLSQ 549
Query: 1075 HQWG*IFHLIILDMEELALEV 1137
HQ G + H II E LA +
Sbjct: 550 HQQGSMGHQIIHTREALAFRI 612
Score = 176 bits (378), Expect(2) = 2e-061
Identities = 88/138 (63%), Positives = 95/138 (68%)
Frame = -3 / -2
Query: 940 CWKGK*RVWPDEWQVDGLSCPAVSCSRNSSFGGSLGRAKFGVSARFLSYTGISIDD*AVS 761
CWKGK + P E Q+ S P S SRN+SFGG+L AK VS R L TG S D AVS
Sbjct: 415 CWKGKFGIGPVERQLVRFS*PETSWSRNNSFGGTLRCAKLVVSLRCLPSTGSSSGDCAVS 236
Query: 760 LRRGLKFPRGPVLDGLMSLDPEVLSVLMVGAAPP*SASVSGLWVLGSMPFCLSFFLMHEF 581
LRR LK P P L+G SLD EVLSVL+VGAA S S GLWVLGSMPFC SFFLM EF
Sbjct: 235 LRRWLKLPSAPPLEGSTSLDSEVLSVLIVGAALLCSTSARGLWVLGSMPFCRSFFLMLEF 56
Query: 580 HRFLISLSVLPGSCAAI* 527
RFLISLSVLPG+ AI*
Sbjct: 55 QRFLISLSVLPGNLVAI* 2
Score = 116 bits (247), Expect(2) = 1e-033
Identities = 65/139 (46%), Positives = 77/139 (55%)
Frame = +2 / +2
Query: 527 SNCSAAARED***DQESMELVHQEEAEAERH*SQHPQATY*GXXXXXXXXXXXXENLRVQ 706
S+C+ A ++** D ES+EL HQEEA AERH QHPQA G ENL VQ
Sbjct: 2 SDCNKVAWKN**RD*ESLELKHQEEAPAERHRPQHPQAPCRG*TQQSSANNQY*ENL*VQ 181
Query: 707 RHQPIKHWSSGELEPPPQRDGSIINADARVRQESC*NTKLGTP*AATKGAVPGAAYCWTR 886
P K W + +LEP QRD +I A A R S N LGT A +G +P A W+
Sbjct: 182 *C*PFKWWCTWQLEPSSQRDSTITRAAASAR*ASQRNY*LGTSKGAAEGVIP*PACFWS* 361
Query: 887 ESINLPLIRPNSLFPFPTA 943
+ LPL RPNS FPFP A
Sbjct: 362 KPH*LPLNRPNSKFPFPAA 418
Score = 96.4 bits (204), Expect(2) = 3e-028
Identities = 52/101 (51%), Positives = 64/101 (63%)
Frame = -2 / -1
Query: 830 CQVWCFSTILVVHGHQH**LSRLAEEGAQVPQRTSA*WVDVAGP*GSLGADGGSCTAVIS 651
CQ F +L H Q *L LAE+ AQV + T+ * V++ G GSL D C AV +
Sbjct: 305 CQASSFFAMLTEHWQQLW*LCCLAEKMAQVAKCTTT*RVNITGLRGSLSTDCWRCFAVFN 126
Query: 650 LSKWLVGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNL 528
L K LVGVG++AFLP+LLLDA VP IL+L+IS Q CNL
Sbjct: 125 LGKGLVGVGVDAFLPELLLDA*VPEILNLVISSSRQPCCNL 3
Score = 83.1 bits (175), Expect(2) = 2e-061
Identities = 34/48 (70%), Positives = 38/48 (79%)
Frame = -3 / -2
Query: 1129 MPVPPCRGLSGGRFSPIDVERADGETGGITVEIVLQLKSLWLNQSEFI 986
MPVPP GLSG SP+DVER DGETGGITVE+VL L S WLNQ+E +
Sbjct: 604 MPVPPECGLSGDPLSPVDVERVDGETGGITVEMVLPLDSFWLNQNELL 461
Score = 51.9 bits (107), Expect(2) = 3e-028
Identities = 35/77 (45%), Positives = 40/77 (51%)
Frame = -2 / -1
Query: 1130 NASSSMSRIIRWKIQPH*CREGRW*NWRHHCRNCAAVEVTLVEPE*IHIRPIXXXXXXXX 951
NAS+S II I+P *C E W*NW HH N AA + LV+PE*I I
Sbjct: 605 NASASRVWIIW*PIEPC*C*ES*W*NWWHHGGNGAAT*LILVKPE*IVTTTILVAKFIVV 426
Query: 950 XXXXLEREIESLA**VA 900
LEREI + A * A
Sbjct: 425 AHQLLEREIWNWAC*AA 375
Score = 50.1 bits (103), Expect(2) = 1e-033
Identities = 22/47 (46%), Positives = 29/47 (61%)
Frame = +2 / +2
Query: 989 EFTLVQPE*LQLQHNFYSDAASFTIGPLYINGAEXXXXXXXXWRNWH 1129
+F LV PE*++ QH+F+ DA SFTI L IN A+ R+WH
Sbjct: 464 QFILV*PE*VKWQHHFHRDATSFTINSLNINRAQWVTR*STLGRHWH 604
Score = 43.2 bits (88), Expect(3) = 1e-012
Identities = 27/61 (44%), Positives = 32/61 (52%)
Frame = -1 / -3
Query: 942 AVGKGNREFGLMSGRLMDSRVQQ*AAPGTAPLVAA*GVPSLVFQHDSCRTRASALMIEPS 763
A GKGN E GL+SG Q+ A G P A VPS F D+ R A+AL+I S
Sbjct: 417 AAGKGNLELGLLSGS**GFHDQKQAGQGITPSAAPLDVPS**FLCDAYRALAAALVIVLS 238
Query: 762 R 760
R
Sbjct: 237 R 235
Score = 37.7 bits (76), Expect(3) = 1e-012
Identities = 18/37 (48%), Positives = 21/37 (56%)
Frame = -1 / -3
Query: 723 LMG*CRWTLRFSRC*WWELHRRDQPQ*VACGCWDQCL 613
L G WT RFS+ * L QP+ ACGCW +CL
Sbjct: 198 LKGQHHWTQRFSQY*LLALLCCVQPRQGACGCWGRCL 88
Score = 31.3 bits (62), Expect(3) = 1e-012
Identities = 20/49 (40%), Positives = 23/49 (46%)
Frame = -1 / -3
Query: 1137 YFQCQFLHVEDYQVEDSAPLM*RGPMVXXXXXXXXXXXXXSHSG*TRVN 991
Y +CQ L DY V A LM R MV +HSG*TR+N
Sbjct: 612 YSECQCLPSVDYLVTH*ALLMLRELMVKLVASRWKWCCHLTHSG*TRMN 466
>gb|BI074901.1|BI074901 IP1_17_C12.g1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 625
Score = 140 bits (300), Expect(5) = 2e-079
Identities = 59/72 (81%), Positives = 64/72 (88%)
Frame = -2 / -1
Query: 1811 RVQKENINFQEKGKETLEHTFLCILLQLLMPGLSFP*YCQLFN*GTAVEDDFCINLTYLC 1632
RVQKE F+ K KETLE TFLCILL LLMPGLSFP*YCQ+FN*GTAVED+FCINL YLC
Sbjct: 370 RVQKETSIFKRKKKETLERTFLCILLPLLMPGLSFP*YCQVFN*GTAVEDNFCINLMYLC 191
Query: 1631 EQFSIILPTNL* 1596
+QFSI+LPTNL*
Sbjct: 190 KQFSIVLPTNL* 155
Score = 138 bits (295), Expect(4) = 3e-073
Identities = 59/72 (81%), Positives = 63/72 (87%)
Frame = -1 / -3
Query: 1812 SCTEGKHQFSRERKGDSRTYFPMHPAATSNARAVLSLILPALQLRNSCGG*FLYQLNVSM 1633
SCTEG F + KGDSRTYF MH AATSNARAVLSLILP LQLRNSCGG*FLYQLNVSM
Sbjct: 371 SCTEGNINFQEKEKGDSRTYFSMHSAATSNARAVLSLILPGLQLRNSCGG*FLYQLNVSM 192
Query: 1632 *AIQHNSAHESL 1597
*AIQH+S+H+SL
Sbjct: 191 *AIQHSSSHKSL 156
Score = 138 bits (295), Expect(5) = 4e-085
Identities = 59/72 (81%), Positives = 62/72 (86%)
Frame = +1 / +3
Query: 1597 QRFVGRIMLNCSHRYVKLIQKSSSTAVPQLKSWQYQGKDSPGIRSCSRMHRKVCSRVSFP 1776
QRFVGR MLNC HRY+KLIQK SSTAVPQLK+WQYQGKDSPGIRS SRMHRKV SRVSF
Sbjct: 156 QRFVGRTMLNCLHRYIKLIQKLSSTAVPQLKTWQYQGKDSPGIRSGSRMHRKVRSRVSFF 335
Query: 1777 FS*KLMFSFCTR 1812
F K+ SFCTR
Sbjct: 336 FLLKIDVSFCTR 371
Score = 133 bits (285), Expect(4) = 5e-066
Identities = 59/80 (73%), Positives = 65/80 (81%)
Frame = +2 / +1
Query: 1574 EEAETRIFRDSWAELC*IAHIDTLS*YRNHPPQLFLS*RAGNIKERTALALEVAAGCIGK 1753
++ + +FRD W ELC*IA+IDTLS*YRN+PPQLFLS*R GNIKERTALALEVAA CI K
Sbjct: 133 QQKQKLVFRDLWEELC*IAYIDTLS*YRNYPPQLFLS*RPGNIKERTALALEVAAECIEK 312
Query: 1754 YVLESPFLSLEN*CFPSVHD 1813
YVLESPF FPSVHD
Sbjct: 313 YVLESPFSFS*KLMFPSVHD 372
Score = 130 bits (278), Expect(4) = 6e-065
Identities = 56/73 (76%), Positives = 63/73 (86%)
Frame = -3 / -2
Query: 1813 VVYRRKTSIFKRKERRL*NILSYASCCNF*CQGCPFLDIASSSTEEQLWRMISVST*RIY 1634
VVYRRK + ++RRL*N+L YA CC+F*CQGCPFLDIA SSTEEQLWR+ISVST* IY
Sbjct: 372 VVYRRKHQFSRERKRRL*NVLFYAFCCHF*CQGCPFLDIARSSTEEQLWRIISVST*CIY 193
Query: 1633 VSNSA*FCPRISE 1595
VSNSA*F P+ISE
Sbjct: 192 VSNSA*FFPQISE 154
Score = 108 bits (230), Expect(5) = 4e-085
Identities = 43/50 (86%), Positives = 43/50 (86%)
Frame = +1 / +2
Query: 1444 SRISSHSNSCR*HQTCMTRTCKECNYLLRISRHYVPPHGTEQIRRSRNSY 1593
SRIS HSNSCR H TCMTRTCKECN LLRISRHYVPPHGTE I RSRN Y
Sbjct: 5 SRISRHSNSCRLHPTCMTRTCKECNCLLRISRHYVPPHGTELISRSRNLY 154
Score = 105 bits (223), Expect(4) = 4e-034
Identities = 46/59 (77%), Positives = 54/59 (91%)
Frame = +3 / +2
Query: 1578 KQKLVFSEIRGQNYAELLT*IR*VDTEIILHSCSSVEELAISRKGQPWH*KLQQDA*ES 1754
+ + ++SEI G+NYAELLT*I *VDTEIILHSCSSVE+LAISRKGQPWH*K QQ+A*+S
Sbjct: 137 RSRNLYSEICGKNYAELLT*IH*VDTEIILHSCSSVEDLAISRKGQPWH*KWQQNA*KS 313
Score = 90.9 bits (192), Expect(5) = 2e-079
Identities = 38/54 (70%), Positives = 42/54 (77%)
Frame = -1 / -1
Query: 1602 SLKIRVSASSDLLCSMWWNIMPRYSQKIVAFFASPCHTCLVLPXXXXXXADSGT 1441
+L I+VSAS+D LCSM WNI+PRYSQK VAFFASPCHTC V P ADSGT
Sbjct: 163 NL*IQVSASADQLCSMRWNIVPRYSQKTVAFFASPCHTCWVQPAAVAVSADSGT 2
Score = 90.9 bits (192), Expect(2) = 1e-023
Identities = 36/42 (85%), Positives = 41/42 (97%)
Frame = +3 / +1
Query: 1479 APDMYDKDLQRMQLSFENI*ALCSTTWNRADQKKQKLVFSEI 1604
AP+MYDKDLQRMQLSFENI*ALCST+WNRADQ+KQKLVF ++
Sbjct: 40 APNMYDKDLQRMQLSFENI*ALCSTSWNRADQQKQKLVFRDL 165
Score = 86.8 bits (183), Expect(4) = 3e-073
Identities = 40/53 (75%), Positives = 41/53 (77%)
Frame = -3 / -3
Query: 1600 SENTSFCFF*SALFHVVEHNA*IFSKDSCILCKSLSYMSGATXXXXXXX*FWN 1442
S NTSFCF *SALFH VEH+A*IFSKDSCILCKSLSYM GA *FWN
Sbjct: 161 SLNTSFCFC*SALFHEVEHSA*IFSKDSCILCKSLSYMLGAACSCCCVC*FWN 3
Score = 80.3 bits (169), Expect(4) = 5e-066
Identities = 37/53 (69%), Positives = 39/53 (73%)
Frame = +2 / +3
Query: 1442 VPESXXXXXXXGSTRHV*QGLAKNATIF*EYLGIMFHHMEQSRSEEAETRIFR 1600
VPES G T+HV*QGLAKNAT+F*EYLG MFH MEQS S EAET I R
Sbjct: 3 VPESADTATAAGCTQHV*QGLAKNATVF*EYLGTMFHLMEQS*SAEAETCIQR 161
Score = 74.4 bits (156), Expect(4) = 6e-065
Identities = 33/39 (84%), Positives = 35/39 (89%)
Frame = -2 / -2
Query: 1595 KYEFLLLLICSVPCGGT*CLDILKR*LHSLQVLVIHVWC 1479
+Y+FLLLLI SVP GGT*CLDILKR LHSLQVLVIHV C
Sbjct: 156 EYKFLLLLISSVP*GGT*CLDILKRQLHSLQVLVIHVGC 40
Score = 69.8 bits (146), Expect(4) = 5e-066
Identities = 30/50 (60%), Positives = 32/50 (64%)
Frame = +3 / +1
Query: 1842 LSGGN*INIDSHRQKCMCR*LSTCK*PQTFNCCHACPCKLIIACCIFHFF 1991
LSGGN*INIDSH Q CMCR*LS CK PQTF ++ FHFF
Sbjct: 406 LSGGN*INIDSHGQNCMCR*LSPCKQPQTFQLLPCTSMQINYCMLYFHFF 555
Score = 66.1 bits (138), Expect(5) = 2e-079
Identities = 25/29 (86%), Positives = 25/29 (86%)
Frame = -3 / -3
Query: 1930 KVWGYLHVESYRHMHFCLWLSIFI*FPPE 1844
KVWG LH ESYRHM FC WLSIFI*FPPE
Sbjct: 494 KVWGCLHGESYRHMQFCPWLSIFI*FPPE 408
Score = 62.9 bits (131), Expect(4) = 3e-073
Identities = 24/32 (75%), Positives = 26/32 (81%)
Frame = -1 / -1
Query: 1929 KFGATCTLRATDTCIFAYGYLYLFNFHQREQK 1834
KFGA C +RATDTC FA+G LYLFNFHQR K
Sbjct: 493 KFGAACMVRATDTCNFAHGCLYLFNFHQRVNK 398
Score = 61.1 bits (127), Expect(4) = 6e-065
Identities = 26/31 (83%), Positives = 29/31 (93%)
Frame = -2 / -2
Query: 1934 VESLGLLAR*ELPTHAFLPMAIYIYLISTRE 1842
++SLGLLA *ELPTHA LPMA+YIYLISTRE
Sbjct: 498 LKSLGLLAW*ELPTHAILPMAVYIYLISTRE 406
Score = 60.6 bits (126), Expect(5) = 4e-085
Identities = 23/30 (76%), Positives = 26/30 (86%)
Frame = +2 / +3
Query: 1841 SLWWKLNKYR*P*AKMHVSVALNVQVAPNF 1930
+LWWKLNKYR P AK+HVSVAL +Q APNF
Sbjct: 405 TLWWKLNKYRQPWAKLHVSVALTMQAAPNF 494
Score = 54.2 bits (112), Expect(5) = 4e-085
Identities = 19/24 (79%), Positives = 20/24 (83%)
Frame = +3 / +2
Query: 1920 PQTFNCCHACPCKLIIACCIFHFF 1991
P+ FNCCHA PCKLIIACCIF F
Sbjct: 485 PKLFNCCHARPCKLIIACCIFISF 556
Score = 51.0 bits (105), Expect(5) = 2e-079
Identities = 19/24 (79%), Positives = 20/24 (83%)
Frame = -2 / -1
Query: 1991 KEMKNTTCNN*FAWTCMAAVESLG 1920
K +NTTCNN*FAWTCMAAVE G
Sbjct: 556 KRNENTTCNN*FAWTCMAAVEKFG 485
Score = 49.2 bits (101), Expect(4) = 4e-034
Identities = 18/20 (90%), Positives = 18/20 (90%)
Frame = +2 / +1
Query: 1928 FQLLPCMSMQINYCMLYFSF 1987
FQLLPC SMQINYCMLYF F
Sbjct: 493 FQLLPCTSMQINYCMLYFHF 552
Score = 48.3 bits (99), Expect(4) = 3e-073
Identities = 20/26 (76%), Positives = 21/26 (80%)
Frame = -3 / -2
Query: 1990 KK*KIQHAIINLHGHAWQQLKVWGYL 1913
K+ KIQHAIINLHG AWQQLK G L
Sbjct: 555 KEMKIQHAIINLHGRAWQQLKSLGLL 478
Score = 45.1 bits (92), Expect(2) = 1e-023
Identities = 18/22 (81%), Positives = 20/22 (90%)
Frame = +1 / +3
Query: 1915 SSPKLSTAAMHVHAN*LLHVVF 1980
++P STAAMHVHAN*LLHVVF
Sbjct: 480 AAPNFSTAAMHVHAN*LLHVVF 545
Score = 42.3 bits (86), Expect(4) = 6e-065
Identities = 17/18 (94%), Positives = 18/18 (100%)
Frame = -1 / -3
Query: 1980 KYNMQ*LICMDMHGSS*K 1927
KYNMQ*LICMD+HGSS*K
Sbjct: 545 KYNMQ*LICMDVHGSS*K 492
Score = 40.9 bits (83), Expect = 0.067
Identities = 23/53 (43%), Positives = 26/53 (49%)
Frame = +1 / +2
Query: 1834 FLFSLVEXXXXXXXXGKNACVGSSQRASSPKLSTAAMHVHAN*LLHVVFFISF 1992
F+ SLVE GK ACVGSS ASSPKL ++ FISF
Sbjct: 398 FVHSLVEIK*I*TAMGKIACVGSSHHASSPKLFNCCHARPCKLIIACCIFISF 556
Score = 33.1 bits (66), Expect(5) = 4e-085
Identities = 12/13 (92%), Positives = 13/13 (100%)
Frame = +1 / +3
Query: 1810 RLNFCIFEFLFSL 1848
RLNFCIFEFLF+L
Sbjct: 372 RLNFCIFEFLFTL 410
Score = 28.1 bits (55), Expect(4) = 5e-066
Identities = 11/12 (91%), Positives = 11/12 (91%)
Frame = +2 / +1
Query: 1811 D*TFAYLSFCSL 1846
D TFAYLSFCSL
Sbjct: 373 DSTFAYLSFCSL 408
Score = 26.3 bits (51), Expect(5) = 2e-079
Identities = 10/13 (76%), Positives = 12/13 (92%)
Frame = -1 / -3
Query: 1848 QREQKLKYAKVQS 1810
+ EQKLKYAKV+S
Sbjct: 410 ESEQKLKYAKVES 372
Score = 25.4 bits (49), Expect(4) = 4e-034
Identities = 12/16 (75%), Positives = 13/16 (81%)
Frame = +3 / +2
Query: 1800 LLYTTELLHI*VFVLS 1847
L TT+LLHI*VFV S
Sbjct: 362 LYTTTQLLHI*VFVHS 409
Score = 23.5 bits (45), Expect(4) = 4e-034
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +2 / +2
Query: 1772 FLSLEN*CF 1798
FLSLEN*CF
Sbjct: 332 FLSLEN*CF 358
>gb|CW448606.1|CW448606 fsbb001f182e24f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f182e24, DNA
sequence
Length = 740
Score = 191 bits (412), Expect(3) = 4e-080
Identities = 82/132 (62%), Positives = 100/132 (75%)
Frame = +3 / -1
Query: 735 LGNLSPLLSETAQSSMLMPVYDKNRAETPNLARPKLPPKELFLEQLTAGHESPSTCHSSG 914
LGNLS LLSETAQS L+PV K+R ET +LA ++PPKELFL+QL +GHE+ ++C S+G
Sbjct: 737 LGNLSHLLSETAQSPELLPVLGKHRKETTSLAHLRVPPKELFLDQLVSGHENLTSCRSTG 558
Query: 915 QTLYFPFQQPLGYNSESGSSDGANMNSLWFNQSDFNCSTISTVMPPVSPSALSTSMGLNL 1094
FPFQQ + YN+E G +G + NS WFNQ++ + STISTVMPPVSPS LSTS GLN
Sbjct: 557 PIPNFPFQQLMCYNNEFGHKNGGSNNSFWFNQNESSGSTISTVMPPVSPSTLSTSTGLNG 378
Query: 1095 PPDNPRHGGTGI 1130
PDNP GGTGI
Sbjct: 377 SPDNPHSGGTGI 342
Score = 115 bits (246), Expect(3) = 6e-039
Identities = 60/132 (45%), Positives = 75/132 (56%)
Frame = +1 / -2
Query: 742 T*APSSARRLNHQC*CPCTTRIVLKHQTWHALSCHQRSCSWSSLLLDTRVHQPATHQAKL 921
T*A SAR+ NHQ C C+ I K WH C +RS S +SL L + A QA+
Sbjct: 730 T*AIFSARQHNHQSCCQCSVSIAKKLLAWHI*GCRRRSYSLTSLFLVMKTSLAAAQQAQF 551
Query: 922 SISLSNSP*ATTVRVAAAMGRI*IHSGSTRVTSTAAQFLQ*CRQFHHRPSLHQWG*IFHL 1101
ISLS+S ATT+ +A M + IHSG TR++ AA F *C QFHH+ S HQ G + H
Sbjct: 550 QISLSSS*CATTMNLATRMVVVTIHSGLTRMSQVAAPFPP*CHQFHHQLSQHQQGSMGHQ 371
Query: 1102 IILDMEELALEV 1137
II E LA +
Sbjct: 370 IIHTREALAFRI 335
Score = 83.1 bits (175), Expect(4) = 8e-052
Identities = 34/48 (70%), Positives = 38/48 (79%)
Frame = -3 / +1
Query: 1129 MPVPPCRGLSGGRFSPIDVERADGETGGITVEIVLQLKSLWLNQSEFI 986
MPVPP GLSG SP+DVER DGETGGITVE+VL L S WLNQ+E +
Sbjct: 343 MPVPPECGLSGDPLSPVDVERVDGETGGITVEMVLPLDSFWLNQNELL 486
Score = 81.7 bits (172), Expect(3) = 4e-080
Identities = 31/68 (45%), Positives = 40/68 (58%)
Frame = +3 / -1
Query: 1152 FYWDGTNPXXXXXXXXXXXXXXXFEPQSTSTILENSVFPWTDIGQEKDTRAHLVAELKWP 1331
FYW+ NP FE QSTS++LE+SVFPWTD+ +K+++ HL ELKWP
Sbjct: 329 FYWETANPSSSSSRGSSGSNSLGFERQSTSSLLESSVFPWTDLTPDKNSQVHLEEELKWP 150
Query: 1332 DSFAETTT 1355
D T T
Sbjct: 149 DLLHGTFT 126
Score = 73.0 bits (153), Expect(4) = 8e-052
Identities = 38/68 (55%), Positives = 42/68 (61%)
Frame = -3 / +1
Query: 940 CWKGK*RVWPDEWQVDGLSCPAVSCSRNSSFGGSLGRAKFGVSARFLSYTGISIDD*AVS 761
CWKGK + P E Q+ S P S SRN+SFGG+L AK VS R L TG S D AVS
Sbjct: 532 CWKGKFGIGPVERQLVRFS*PETSWSRNNSFGGTLRCAKLVVSLRCLPSTGSSSGDCAVS 711
Query: 760 LRRGLKFP 737
LRR LK P
Sbjct: 712 LRRWLKLP 735
Score = 67.5 bits (141), Expect(3) = 4e-080
Identities = 25/36 (69%), Positives = 31/36 (86%)
Frame = +3 / -1
Query: 1335 SFAETTTVMQNQSQTLYDDVIKAESQFNIEGICASW 1442
+F +T MQN SQ+LY+DVIKAESQFNIEG+CA+W
Sbjct: 134 TFTDTPATMQNLSQSLYEDVIKAESQFNIEGLCAAW 27
Score = 61.1 bits (127), Expect(4) = 1e-029
Identities = 32/68 (47%), Positives = 38/68 (55%)
Frame = +2 / -3
Query: 740 ELEPPPQRDGSIINADARVRQESC*NTKLGTP*AATKGAVPGAAYCWTRESINLPLIRPN 919
+LEP QRD +I A A R S N LGT A +G +P A W+ + LPL RPN
Sbjct: 732 QLEPSSQRDSTITRAAASAR*ASQRNY*LGTSKGAAEGVIP*PACFWS*KPH*LPLNRPN 553
Query: 920 SLFPFPTA 943
S FPFP A
Sbjct: 552 SKFPFPAA 529
Score = 55.1 bits (114), Expect(4) = 8e-052
Identities = 27/48 (56%), Positives = 33/48 (68%)
Frame = -3 / +1
Query: 1360 MTVVVSAKESGHLSSATR*ALVSFSCPMSVHGKTLFSRIVLVLCGSNP 1217
++V V +SGHLSS++R* + S SVHGKTL SR LVLC SNP
Sbjct: 121 VSVNVPWSKSGHLSSSSR*TWLFLSGVKSVHGKTLLSRSELVLCRSNP 264
Score = 52.4 bits (108), Expect(4) = 8e-052
Identities = 24/36 (66%), Positives = 26/36 (72%)
Frame = -3 / +1
Query: 1450 FWNQEAHIPSMLNWLSALITSS*SVWLWFCMTVVVS 1343
F +Q A PSMLNWLSALITSS S WL FC+ VS
Sbjct: 19 F*DQAAQRPSMLNWLSALITSSYSDWLRFCIVAGVS 126
Score = 51.9 bits (107), Expect(3) = 2e-014
Identities = 35/77 (45%), Positives = 40/77 (51%)
Frame = -2 / +3
Query: 1130 NASSSMSRIIRWKIQPH*CREGRW*NWRHHCRNCAAVEVTLVEPE*IHIRPIXXXXXXXX 951
NAS+S II I+P *C E W*NW HH N AA + LV+PE*I I
Sbjct: 342 NASASRVWIIW*PIEPC*C*ES*W*NWWHHGGNGAAT*LILVKPE*IVTTTILVAKFIVV 521
Query: 950 XXXXLEREIESLA**VA 900
LEREI + A * A
Sbjct: 522 AHQLLEREIWNWAC*AA 572
Score = 50.1 bits (103), Expect(4) = 1e-029
Identities = 22/47 (46%), Positives = 29/47 (61%)
Frame = +2 / -3
Query: 989 EFTLVQPE*LQLQHNFYSDAASFTIGPLYINGAEXXXXXXXXWRNWH 1129
+F LV PE*++ QH+F+ DA SFTI L IN A+ R+WH
Sbjct: 483 QFILV*PE*VKWQHHFHRDATSFTINSLNINRAQWVTR*STLGRHWH 343
Score = 48.7 bits (100), Expect(3) = 6e-039
Identities = 21/42 (50%), Positives = 27/42 (64%)
Frame = +1 / -2
Query: 1210 TVWDLNHRARAQFWRTVSSHGQTLDKKKIQGLT**RNLSGLT 1335
T WDL+ +A+A FW+ V SHGQ + KI T +N SGLT
Sbjct: 271 TAWDLSGKAQAHFWKVVFSHGQI*HQIKIAKFTLRKNSSGLT 146
Score = 45.5 bits (93), Expect(4) = 1e-020
Identities = 23/44 (52%), Positives = 26/44 (59%)
Frame = -1 / +2
Query: 1347 FRQRSQAT*VPLLGEPLYLFLVQCLSMGRHCSPELCSCSVVQIP 1216
F SQAT*V GE Y +LV LSMG+H PE+ C QIP
Sbjct: 134 FHGASQAT*VLPQGELGYFYLVLNLSMGKHYFPEVSLCFAAQIP 265
Score = 43.2 bits (88), Expect(4) = 1e-020
Identities = 27/61 (44%), Positives = 32/61 (52%)
Frame = -1 / +2
Query: 942 AVGKGNREFGLMSGRLMDSRVQQ*AAPGTAPLVAA*GVPSLVFQHDSCRTRASALMIEPS 763
A GKGN E GL+SG Q+ A G P A VPS F D+ R A+AL+I S
Sbjct: 530 AAGKGNLELGLLSGS**GFHDQKQAGQGITPSAAPLDVPS**FLCDAYRALAAALVIVLS 709
Query: 762 R 760
R
Sbjct: 710 R 712
Score = 42.8 bits (87), Expect(3) = 2e-014
Identities = 22/61 (36%), Positives = 27/61 (44%)
Frame = -2 / +3
Query: 1334 VRPLKFRY*VSPCIFFLSNVCPWEDTVLQNCARALWFKSHTVXXXXXXXXXXXXXXXXPV 1155
VRPL+F V+ IF +CPWE+T Q A AL KS V P+
Sbjct: 147 VRPLEFFLKVNLAIFIWC*ICPWENTTFQK*ACALPLKSQAVASAASSTAAAARISSFPI 326
Query: 1154 E 1152
E
Sbjct: 327 E 329
Score = 42.3 bits (86), Expect(4) = 1e-029
Identities = 23/48 (47%), Positives = 27/48 (56%)
Frame = +2 / -3
Query: 1217 GI*TTEHEHNSGEQCLPMDRHWTRKRYKGSPSSGT*VA*LLCRNDHSH 1360
GI* +H+ SG+ C PMDR TR + SP T VA*L N H H
Sbjct: 264 GI*AAKHKLTSGK*CFPMDRFNTR*K*PSSP*GRTQVA*LAPWNIHGH 121
Score = 37.7 bits (76), Expect(3) = 6e-039
Identities = 19/38 (50%), Positives = 22/38 (57%)
Frame = +1 / -2
Query: 1354 QSCRTRAKRFMMM*SRQRANST*KGYVLLGSRISSHSN 1467
Q CR A M S+ RANST*+ V G +I SHSN
Sbjct: 115 QRCRILASHCTKMLSKPRANST*RASVQPGLKICSHSN 2
Score = 35.0 bits (70), Expect(4) = 1e-020
Identities = 15/30 (50%), Positives = 19/30 (63%)
Frame = -2 / +3
Query: 1442 PRSTYPFYVELALCLDHIIIKRLALVLHDC 1353
P T YVELAL D+I ++ LA +LH C
Sbjct: 27 PGCTEALYVELALGFDNIFVQ*LAKILHRC 116
Score = 34.5 bits (69), Expect(4) = 1e-029
Identities = 16/31 (51%), Positives = 19/31 (61%)
Frame = +2 / -3
Query: 1361 AEPEPNAL**CDQGREPIQHRRDMCFLVPES 1453
AE P + C Q REPIQHR +C LV +S
Sbjct: 108 AES*PVTVRRCYQSREPIQHRGPLCSLVSKS 16
Score = 33.1 bits (66), Expect(4) = 1e-020
Identities = 21/53 (39%), Positives = 25/53 (47%)
Frame = -1 / +2
Query: 1149 NLLRYFQCQFLHVEDYQVEDSAPLM*RGPMVXXXXXXXXXXXXXSHSG*TRVN 991
N + Y +CQ L DY V A LM R MV +HSG*TR+N
Sbjct: 323 NRIGYSECQCLPSVDYLVTH*ALLMLRELMVKLVASRWKWCCHLTHSG*TRMN 481
Score = 24.0 bits (46), Expect(3) = 2e-014
Identities = 14/30 (46%), Positives = 16/30 (53%)
Frame = -2 / +3
Query: 830 CQVWCFSTILVVHGHQH**LSRLAEEGAQV 741
CQ F +L H Q *L LAE+ AQV
Sbjct: 642 CQASSFFAMLTEHWQQLW*LCCLAEKMAQV 731
>gb|CD232318.1|CD232318 SS1_39_E09.g1_A012 Salt-stressed seedlings Sorghum bicolor cDNA
clone SS1_39_E09_A012 5', mRNA sequence
Length = 615
Score = 286 bits (620), Expect = 6e-076
Identities = 110/128 (85%), Positives = 118/128 (92%)
Frame = +3 / +3
Query: 204 TCKLCEFGWSSQVLHCVEMGRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPK 383
+C+LC S+ V + MGRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWS+VPK
Sbjct: 231 SCELCRLQSSASVSALLSMGRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSTVPK 410
Query: 384 LAGLQRCGKSCRLRWINYLRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDN 563
LAGLQRCGKSCRLRWINYLRPDLKRGAF+Q+EEDLIIELHAVLGNRWSQIA +LPGRTDN
Sbjct: 411 LAGLQRCGKSCRLRWINYLRPDLKRGAFSQEEEDLIIELHAVLGNRWSQIATRLPGRTDN 590
Query: 564 EIKNLWNS 587
EIKNLWNS
Sbjct: 591 EIKNLWNS 614
Score = 153 bits (329), Expect = 8e-036
Identities = 64/109 (58%), Positives = 81/109 (74%)
Frame = -2 / -2
Query: 584 VP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECPSLEVWPQIVYPPQPTTLS 405
VP IL+L+IS Q CNLRPPV + S++ +D+VFF+L EC S +V PQ++YPPQP L+
Sbjct: 611 VPEILNLVISSSRQPCCNLRPPVSQYSMKFNDKVFFLLRECTSFKVRPQVIYPPQPAALA 432
Query: 404 APLKPSEFGNRAPAAMAMLCYVIHEFLILLRGPEPLSQLLLVAARMPPH 258
PLKP + + APAAM +L YV+HE LI LR PEPL QLLLV A +PPH
Sbjct: 431 TPLKPCKLRDSAPAAMPVLGYVVHELLIFLRRPEPLPQLLLVTAGVPPH 285
Score = 152 bits (326), Expect = 2e-035
Identities = 73/116 (62%), Positives = 75/116 (64%)
Frame = -3 / -3
Query: 586 EFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANAPLLRSGLR*FIHLSLQLF 407
EF RFLISLSVLPG+ AI*DHLFP TA S NAPLLRSGLR*FIHLSLQL
Sbjct: 613 EFQRFLISLSVLPGNLVAI*DHLFPSTA*SSMIRSSSS*ENAPLLRSGLR*FIHLSLQLL 434
Query: 406 PHL*SPASLGTELQQPWPCFVMXXXXXXXXXXXXXXXXXFCL*QQECLPISTQCRT 239
PHL*SPAS GT LQQP PC VM FCL*QQECLPI + T
Sbjct: 433 PHL*SPASFGTVLQQPCPCLVMWFMSFSSSSGDQSPFLSFCL*QQECLPIESNAET 266
Score = 85.4 bits (180), Expect = 3e-015
Identities = 41/62 (66%), Positives = 47/62 (75%)
Frame = +2 / +2
Query: 257 DGEAFLLLQAEAEKGALVP*GG*ETHESHNKAWPWLLELCSQTRWASKVRKEL*AEVDKL 436
+GEA LLLQAEAE+GALV *G *E HE HN+A WLLE C + AS+V +EL AEVDKL
Sbjct: 284 NGEALLLLQAEAEEGALVS*GR*EAHEPHNQARAWLLEHCPEACRASEVWQELQAEVDKL 463
Query: 437 SE 442
E
Sbjct: 464 PE 469
Score = 85.4 bits (180), Expect(2) = 2e-017
Identities = 44/77 (57%), Positives = 51/77 (66%)
Frame = +1 / +1
Query: 238 RFCIALRWGGILAATSRS*ERGSGPLRRMRNS*IT*QSMAMAAGALFPNSLGFKGAERVV 417
+F +WGG A TSRS* RGSG LR+MR+S* T* S MAAGAL + GF+G R
Sbjct: 265 QFQHCFQWGGTPAVTSRS*GRGSGLLRKMRSS*TT*PSTGMAAGALSRSLQGFRGVARAA 444
Query: 418 G*GG*TI*GQTSREGHS 468
G*GG* *G T +E HS
Sbjct: 445 G*GG*IT*GLTLKEVHS 495
Score = 83.1 bits (175), Expect = 1e-014
Identities = 42/69 (60%), Positives = 48/69 (69%)
Frame = -1 / -1
Query: 465 MPLS*GLASDSLSTSAYNSFRTFEAQRVWEQSSSSHGHALLCDS*VSHPPQGTRAPFSAS 286
M L *G AS +LSTSA +S T EA + Q SSSH A LC S* SH PQ TRAP SAS
Sbjct: 492 MHLF*GQASGNLSTSACSSCHTSEALQASGQCSSSHARAWLCGS*ASHLPQETRAPSSAS 313
Query: 285 ACSSKNASP 259
AC+S++ASP
Sbjct: 312 ACNSRSASP 286
Score = 26.3 bits (51), Expect(2) = 2e-017
Identities = 13/24 (54%), Positives = 19/24 (79%)
Frame = +2 / +2
Query: 515 EQVVSNCSAAARED***DQESMEL 586
+QVVS+C+ A ++** D ES+EL
Sbjct: 542 KQVVSDCNKVAWKN**RD*ESLEL 613
>gb|CN149937.1|CN149937 WOUND1_65_G12.g1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_65_G12_A002 5', mRNA sequence
Length = 748
Score = 285 bits (616), Expect = 2e-075
Identities = 107/143 (74%), Positives = 126/143 (88%)
Frame = +3 / +1
Query: 258 MGRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINY 437
M + SCC+K+KLR+GLWSPEEDEKLMNHI ++GHGCWSSVPKLAGL+RCGKSCRLRWINY
Sbjct: 154 MAKQSCCHKKKLRRGLWSPEEDEKLMNHIAQYGHGCWSSVPKLAGLERCGKSCRLRWINY 333
Query: 438 LRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKG 617
LRPDLKRG F+Q+EEDLII LH++LGN+WSQIAAQLPGRTDNE+KN WNS IKK+LR++G
Sbjct: 334 LRPDLKRGTFSQEEEDLIIHLHSLLGNKWSQIAAQLPGRTDNEVKNFWNSYIKKRLRERG 513
Query: 618 IDPNTHKPLTEADHGGAAPTIST 686
IDP TH+PL E A + +T
Sbjct: 514 IDPATHQPLAEPAAATAPASTTT 582
Score = 172 bits (370), Expect = 2e-041
Identities = 75/131 (57%), Positives = 95/131 (72%)
Frame = -2 / -2
Query: 650 LSKWLVGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVL 471
L + LVG G++A LP+ LLD RVP +LDL++ P QLR NLRP V + V++ DEV +L
Sbjct: 546 LGERLVGGGVDAALPEPLLDVRVPKVLDLVVRPARQLRRNLRPLVSQQGVEVYDEVLLLL 367
Query: 470 GECPSLEVWPQIVYPPQPTTLSAPLKPSEFGNRAPAAMAMLCYVIHEFLILLRGPEPLSQ 291
EC LEVWPQ+VYPPQP L+ PL+ + G+ APAAMA+L V+HE L+LL GPEP Q
Sbjct: 366 *ECSPLEVWPQVVYPPQPAALATPLESCKLGH*APAAMAVLGNVVHELLVLLGGPEPSPQ 187
Query: 290 LLLVAARMPPH 258
LLLVAAR+ H
Sbjct: 186 LLLVAARLLRH 154
Score = 165 bits (355), Expect = 2e-039
Identities = 79/146 (54%), Positives = 90/146 (61%)
Frame = -3 / -3
Query: 691 LSVLMVGAAPP*SASVSGLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFP 512
L+V+++ A + S SG WV GSMP LS FLM+EF +FL SLSV PGSCAAI*DHLFP
Sbjct: 587 LTVVVLAGAVAAAGSASGWWVAGSMPRSLSLFLMYEFQKFLTSLSVRPGSCAAI*DHLFP 408
Query: 511 RTACXXXXXXXXSWANAPLLRSGLR*FIHLSLQLFPHL*SPASLGTELQQPWPCFVMXXX 332
S N PLLRSGLR*FIHLSLQL PHL SPASLGTELQQPWP + M
Sbjct: 407 SKEWRCMMRSSSSCENVPLLRSGLR*FIHLSLQLLPHLSSPASLGTELQQPWPYWAMWFM 228
Query: 331 XXXXXXXXXXXXXXFCL*QQECLPIS 254
F L Q +C ++
Sbjct: 227 SFSSSSGDQSPLLSFFLWQHDCFAMA 150
Score = 83.1 bits (175), Expect = 1e-014
Identities = 41/71 (57%), Positives = 45/71 (63%)
Frame = -1 / -1
Query: 456 S*GLASDSLSTSAYNSFRTFEAQRVWEQSSSSHGHALLCDS*VSHPPQGTRAPFSASACS 277
S*GLAS SLSTSA +S T + W SSSSHG C S* S PP+GTRA SAS+C
Sbjct: 352 S*GLASGSLSTSACSSCHTSRVLQAWALSSSSHGRTGQCGS*ASRPPRGTRALSSASSCG 173
Query: 276 SKNASPSQRNA 244
S ASP R A
Sbjct: 172 STTASPWHRQA 140
Score = 76.7 bits (161), Expect(2) = 2e-022
Identities = 41/70 (58%), Positives = 44/70 (62%)
Frame = +1 / +2
Query: 259 WGGILAATSRS*ERGSGPLRRMRNS*IT*QSMAMAAGALFPNSLGFKGAERVVG*GG*TI 438
W AAT RS* GSGP RR R+S* T S AMAAGA P+ +G R G*GG*T
Sbjct: 155 WRSSRAATRRS*GEGSGPPRRTRSS*TTLPSTAMAAGAQCPSLQDSRGVARAAG*GG*TT 334
Query: 439 *GQTSREGHS 468
*GQTSR HS
Sbjct: 335 *GQTSRGEHS 364
Score = 70.3 bits (147), Expect(2) = 6e-018
Identities = 35/61 (57%), Positives = 40/61 (65%)
Frame = +2 / +3
Query: 260 GEAFLLLQAEAEKGALVP*GG*ETHESHNKAWPWLLELCSQTRWASKVRKEL*AEVDKLS 439
GEA +L Q EAE+ ALVP GG E HE H PWLLEL +Q +V +EL AEVDKL
Sbjct: 156 GEAVVLPQEEAEERALVPRGGREAHEPHCPVRPWLLELSAQACRTREVWQELQAEVDKLP 335
Query: 440 E 442
E
Sbjct: 336 E 338
Score = 51.9 bits (107), Expect(2) = 2e-022
Identities = 24/42 (57%), Positives = 29/42 (69%)
Frame = +2 / +3
Query: 515 EQVVSNCSAAARED***DQESMELVHQEEAEAERH*SQHPQA 640
+QVVS+C AAA D QE +ELVHQEEA+ RH +HP A
Sbjct: 411 KQVVSDCGAAAWPDGQRGQELLELVHQEEAQGARHRPRHPPA 536
Score = 43.2 bits (88), Expect(2) = 6e-018
Identities = 19/35 (54%), Positives = 21/35 (60%)
Frame = +1 / +2
Query: 535 QRSCQGGLIMRSRIYGTRASRRS*GRKALIPTPTS 639
+RSC G RSR +GTR SRR G A P PTS
Sbjct: 431 RRSCLAGRTTRSRTFGTRTSRRGSGSAASTPPPTS 535
>gb|CW251033.1|CW251033 104_713_11223710_148_35059_055 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11223710, DNA
sequence
Length = 739
Score = 196 bits (423), Expect(3) = 2e-075
Identities = 85/137 (62%), Positives = 103/137 (75%)
Frame = +3 / +1
Query: 720 SSTGPLGNLSPLLSETAQSSMLMPVYDKNRAETPNLARPKLPPKELFLEQLTAGHESPST 899
SS G LGNLS LLSETAQS L+PV K+R ET +LA ++PPKELFL+QL +GHE+ ++
Sbjct: 1 SSGGALGNLSHLLSETAQSPELLPVLGKHRKETTSLAHLRVPPKELFLDQLVSGHENLTS 180
Query: 900 CHSSGQTLYFPFQQPLGYNSESGSSDGANMNSLWFNQSDFNCSTISTVMPPVSPSALSTS 1079
C S+G FPFQQ + YN+E G +G + NS WFNQ++ + STISTVMPPVSPS LSTS
Sbjct: 181 CRSTGPIPNFPFQQLMCYNNEFGHKNGGSNNSFWFNQNESSGSTISTVMPPVSPSTLSTS 360
Query: 1080 MGLNLPPDNPRHGGTGI 1130
GLN PDNP GGTGI
Sbjct: 361 TGLNGSPDNPHSGGTGI 411
Score = 117 bits (251), Expect(3) = 3e-035
Identities = 62/139 (44%), Positives = 78/139 (56%)
Frame = +1 / +2
Query: 721 QALVLWGT*APSSARRLNHQC*CPCTTRIVLKHQTWHALSCHQRSCSWSSLLLDTRVHQP 900
Q +V T*A SAR+ NHQ C C+ I K WH C +RS S +SL L +
Sbjct: 2 QVVVHLAT*AIFSARQHNHQSCCQCSVSIAKKLLAWHI*GCRRRSYSLTSLFLVMKTSLA 181
Query: 901 ATHQAKLSISLSNSP*ATTVRVAAAMGRI*IHSGSTRVTSTAAQFLQ*CRQFHHRPSLHQ 1080
A QA+ ISLS+S ATT+ +A M + IHSG TR++ AA F *C QFHH+ S HQ
Sbjct: 182 AAQQAQFQISLSSS*CATTMNLATRMVVVTIHSGLTRMSQVAAPFPP*CHQFHHQLSQHQ 361
Query: 1081 WG*IFHLIILDMEELALEV 1137
G + H II E LA +
Sbjct: 362 QGSMGHQIIHTREALAFRI 418
Score = 83.1 bits (175), Expect(4) = 8e-050
Identities = 34/48 (70%), Positives = 38/48 (79%)
Frame = -3 / -3
Query: 1129 MPVPPCRGLSGGRFSPIDVERADGETGGITVEIVLQLKSLWLNQSEFI 986
MPVPP GLSG SP+DVER DGETGGITVE+VL L S WLNQ+E +
Sbjct: 410 MPVPPECGLSGDPLSPVDVERVDGETGGITVEMVLPLDSFWLNQNELL 267
Score = 81.7 bits (172), Expect(3) = 2e-075
Identities = 31/68 (45%), Positives = 40/68 (58%)
Frame = +3 / +1
Query: 1152 FYWDGTNPXXXXXXXXXXXXXXXFEPQSTSTILENSVFPWTDIGQEKDTRAHLVAELKWP 1331
FYW+ NP FE QSTS++LE+SVFPWTD+ +K+++ HL ELKWP
Sbjct: 424 FYWETANPSSSSSRGSSGSNSLGFERQSTSSLLESSVFPWTDLTPDKNSQVHLEEELKWP 603
Query: 1332 DSFAETTT 1355
D T T
Sbjct: 604 DLLHGTFT 627
Score = 76.7 bits (161), Expect(4) = 8e-050
Identities = 40/73 (54%), Positives = 44/73 (60%)
Frame = -3 / -3
Query: 940 CWKGK*RVWPDEWQVDGLSCPAVSCSRNSSFGGSLGRAKFGVSARFLSYTGISIDD*AVS 761
CWKGK + P E Q+ S P S SRN+SFGG+L AK VS R L TG S D AVS
Sbjct: 221 CWKGKFGIGPVERQLVRFS*PETSWSRNNSFGGTLRCAKLVVSLRCLPSTGSSSGDCAVS 42
Query: 760 LRRGLKFPRGPVL 722
LRR LK P P L
Sbjct: 41 LRRWLKLPSAPPL 3
Score = 66.6 bits (139), Expect(3) = 3e-026
Identities = 34/74 (45%), Positives = 41/74 (55%)
Frame = +2 / +3
Query: 722 KHWSSGELEPPPQRDGSIINADARVRQESC*NTKLGTP*AATKGAVPGAAYCWTRESINL 901
K W + +LEP QRD +I A A R S N LGT A +G +P A W+ + L
Sbjct: 3 KWWCTWQLEPSSQRDSTITRAAASAR*ASQRNY*LGTSKGAAEGVIP*PACFWS*KPH*L 182
Query: 902 PLIRPNSLFPFPTA 943
PL RPNS FPFP A
Sbjct: 183 PLNRPNSKFPFPAA 224
Score = 55.1 bits (114), Expect(4) = 8e-050
Identities = 27/48 (56%), Positives = 33/48 (68%)
Frame = -3 / -3
Query: 1360 MTVVVSAKESGHLSSATR*ALVSFSCPMSVHGKTLFSRIVLVLCGSNP 1217
++V V +SGHLSS++R* + S SVHGKTL SR LVLC SNP
Sbjct: 632 VSVNVPWSKSGHLSSSSR*TWLFLSGVKSVHGKTLLSRSELVLCRSNP 489
Score = 51.9 bits (107), Expect(4) = 9e-019
Identities = 35/77 (45%), Positives = 40/77 (51%)
Frame = -2 / -2
Query: 1130 NASSSMSRIIRWKIQPH*CREGRW*NWRHHCRNCAAVEVTLVEPE*IHIRPIXXXXXXXX 951
NAS+S II I+P *C E W*NW HH N AA + LV+PE*I I
Sbjct: 411 NASASRVWIIW*PIEPC*C*ES*W*NWWHHGGNGAAT*LILVKPE*IVTTTILVAKFIVV 232
Query: 950 XXXXLEREIESLA**VA 900
LEREI + A * A
Sbjct: 231 AHQLLEREIWNWAC*AA 181
Score = 50.1 bits (103), Expect(3) = 3e-026
Identities = 22/47 (46%), Positives = 29/47 (61%)
Frame = +2 / +3
Query: 989 EFTLVQPE*LQLQHNFYSDAASFTIGPLYINGAEXXXXXXXXWRNWH 1129
+F LV PE*++ QH+F+ DA SFTI L IN A+ R+WH
Sbjct: 270 QFILV*PE*VKWQHHFHRDATSFTINSLNINRAQWVTR*STLGRHWH 410
Score = 48.7 bits (100), Expect(3) = 3e-035
Identities = 21/42 (50%), Positives = 27/42 (64%)
Frame = +1 / +2
Query: 1210 TVWDLNHRARAQFWRTVSSHGQTLDKKKIQGLT**RNLSGLT 1335
T WDL+ +A+A FW+ V SHGQ + KI T +N SGLT
Sbjct: 482 TAWDLSGKAQAHFWKVVFSHGQI*HQIKIAKFTLRKNSSGLT 607
Score = 46.4 bits (95), Expect(3) = 2e-075
Identities = 19/31 (61%), Positives = 23/31 (74%)
Frame = +3 / +1
Query: 1335 SFAETTTVMQNQSQTLYDDVIKAESQFNIEG 1427
+F +T MQN SQ+LY+DVIKAESQF G
Sbjct: 619 TFTDTPATMQNLSQSLYEDVIKAESQFT*RG 711
Score = 45.5 bits (93), Expect(4) = 9e-019
Identities = 23/44 (52%), Positives = 26/44 (59%)
Frame = -1 / -1
Query: 1347 FRQRSQAT*VPLLGEPLYLFLVQCLSMGRHCSPELCSCSVVQIP 1216
F SQAT*V GE Y +LV LSMG+H PE+ C QIP
Sbjct: 619 FHGASQAT*VLPQGELGYFYLVLNLSMGKHYFPEVSLCFAAQIP 488
Score = 43.2 bits (88), Expect(3) = 1e-014
Identities = 27/61 (44%), Positives = 32/61 (52%)
Frame = -1 / -1
Query: 942 AVGKGNREFGLMSGRLMDSRVQQ*AAPGTAPLVAA*GVPSLVFQHDSCRTRASALMIEPS 763
A GKGN E GL+SG Q+ A G P A VPS F D+ R A+AL+I S
Sbjct: 223 AAGKGNLELGLLSGS**GFHDQKQAGQGITPSAAPLDVPS**FLCDAYRALAAALVIVLS 44
Query: 762 R 760
R
Sbjct: 43 R 41
Score = 42.8 bits (87), Expect(3) = 1e-014
Identities = 22/61 (36%), Positives = 27/61 (44%)
Frame = -2 / -2
Query: 1334 VRPLKFRY*VSPCIFFLSNVCPWEDTVLQNCARALWFKSHTVXXXXXXXXXXXXXXXXPV 1155
VRPL+F V+ IF +CPWE+T Q A AL KS V P+
Sbjct: 606 VRPLEFFLKVNLAIFIWC*ICPWENTTFQK*ACALPLKSQAVASAASSTAAAARISSFPI 427
Query: 1154 E 1152
E
Sbjct: 426 E 424
Score = 42.3 bits (86), Expect(3) = 3e-026
Identities = 23/48 (47%), Positives = 27/48 (56%)
Frame = +2 / +3
Query: 1217 GI*TTEHEHNSGEQCLPMDRHWTRKRYKGSPSSGT*VA*LLCRNDHSH 1360
GI* +H+ SG+ C PMDR TR + SP T VA*L N H H
Sbjct: 489 GI*AAKHKLTSGK*CFPMDRFNTR*K*PSSP*GRTQVA*LAPWNIHGH 632
Score = 41.8 bits (85), Expect(4) = 8e-050
Identities = 18/28 (64%), Positives = 20/28 (71%)
Frame = -3 / -3
Query: 1426 PSMLNWLSALITSS*SVWLWFCMTVVVS 1343
P +NWLSALITSS S WL FC+ VS
Sbjct: 710 PLYVNWLSALITSSYSDWLRFCIVAGVS 627
Score = 33.1 bits (66), Expect(3) = 1e-014
Identities = 21/53 (39%), Positives = 25/53 (47%)
Frame = -1 / -1
Query: 1149 NLLRYFQCQFLHVEDYQVEDSAPLM*RGPMVXXXXXXXXXXXXXSHSG*TRVN 991
N + Y +CQ L DY V A LM R MV +HSG*TR+N
Sbjct: 430 NRIGYSECQCLPSVDYLVTH*ALLMLRELMVKLVASRWKWCCHLTHSG*TRMN 272
Score = 27.2 bits (53), Expect(4) = 9e-019
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = -2 / -2
Query: 1415 ELALCLDHIIIKRLALVLHDC 1353
ELAL D+I ++ LA +LH C
Sbjct: 699 ELALGFDNIFVQ*LAKILHRC 637
Score = 25.8 bits (50), Expect(4) = 9e-019
Identities = 16/37 (43%), Positives = 20/37 (54%)
Frame = -2 / -2
Query: 830 CQVWCFSTILVVHGHQH**LSRLAEEGAQVPQRTSA* 720
CQ F +L H Q *L LAE+ AQV + T+ *
Sbjct: 111 CQASSFFAMLTEHWQQLW*LCCLAEKMAQVAKCTTT* 1
Score = 23.1 bits (44), Expect(3) = 3e-035
Identities = 6/15 (40%), Positives = 11/15 (73%)
Frame = +3 / +3
Query: 1398 KAESQFNIEGICASW 1442
++ +IEG+CA+W
Sbjct: 681 QSREPIHIEGLCAAW 725
>gb|CX611279.1|CX611279 ANR1_23_E12.g1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_23_E12_A002 5', mRNA sequence
Length = 591
Score = 283 bits (613), Expect = 5e-075
Identities = 108/127 (85%), Positives = 117/127 (92%)
Frame = +3 / +1
Query: 204 TCKLCEFGWSSQVLHCVEMGRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPK 383
+C+LC S+ V + MGRHSCCYKQKLRKGLWSPEEDEKLMNH+TKHGHGCWS+VPK
Sbjct: 211 SCELCRLQSSASVSALLSMGRHSCCYKQKLRKGLWSPEEDEKLMNHMTKHGHGCWSTVPK 390
Query: 384 LAGLQRCGKSCRLRWINYLRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDN 563
LAGLQRCGKSCRLRWINYLRPDLKRGAF+Q+EEDLIIELHAVLGNRWSQIA +LPGRTDN
Sbjct: 391 LAGLQRCGKSCRLRWINYLRPDLKRGAFSQEEEDLIIELHAVLGNRWSQIATRLPGRTDN 570
Query: 564 EIKNLWN 584
EIKNLWN
Sbjct: 571 EIKNLWN 591
Score = 151 bits (324), Expect = 4e-035
Identities = 63/109 (57%), Positives = 81/109 (74%)
Frame = -2 / -1
Query: 584 VP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECPSLEVWPQIVYPPQPTTLS 405
VP IL+L+IS Q CNLRPPV + S++ +D+VFF+L EC S +V PQ++YPPQP L+
Sbjct: 591 VPEILNLVISSSRQPCCNLRPPVSQYSMKFNDKVFFLLRECTSFKVRPQVIYPPQPAALA 412
Query: 404 APLKPSEFGNRAPAAMAMLCYVIHEFLILLRGPEPLSQLLLVAARMPPH 258
PLKP + + APAAM +L +V+HE LI LR PEPL QLLLV A +PPH
Sbjct: 411 TPLKPCKLRDSAPAAMPVLGHVVHELLIFLRRPEPLPQLLLVTAGVPPH 265
Score = 149 bits (321), Expect = 1e-034
Identities = 72/115 (62%), Positives = 74/115 (64%)
Frame = -3 / -2
Query: 583 FHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANAPLLRSGLR*FIHLSLQLFP 404
F RFLISLSVLPG+ AI*DHLFP TA S NAPLLRSGLR*FIHLSLQL P
Sbjct: 590 FQRFLISLSVLPGNLVAI*DHLFPSTA*SSMIRSSSS*ENAPLLRSGLR*FIHLSLQLLP 411
Query: 403 HL*SPASLGTELQQPWPCFVMXXXXXXXXXXXXXXXXXFCL*QQECLPISTQCRT 239
HL*SPAS GT LQQP PC VM FCL*QQECLPI + T
Sbjct: 410 HL*SPASFGTVLQQPCPCLVMWFMSFSSSSGDQSPFLSFCL*QQECLPIESNAET 246
Score = 85.4 bits (180), Expect(2) = 7e-017
Identities = 44/77 (57%), Positives = 51/77 (66%)
Frame = +1 / +2
Query: 238 RFCIALRWGGILAATSRS*ERGSGPLRRMRNS*IT*QSMAMAAGALFPNSLGFKGAERVV 417
+F +WGG A TSRS* RGSG LR+MR+S* T* S MAAGAL + GF+G R
Sbjct: 245 QFQHCFQWGGTPAVTSRS*GRGSGLLRKMRSS*TT*PSTGMAAGALSRSLQGFRGVARAA 424
Query: 418 G*GG*TI*GQTSREGHS 468
G*GG* *G T +E HS
Sbjct: 425 G*GG*IT*GLTLKEVHS 475
Score = 83.1 bits (175), Expect = 1e-014
Identities = 40/62 (64%), Positives = 47/62 (75%)
Frame = +2 / +3
Query: 257 DGEAFLLLQAEAEKGALVP*GG*ETHESHNKAWPWLLELCSQTRWASKVRKEL*AEVDKL 436
+GEA LLLQAEAE+GALV *G *E HE H++A WLLE C + AS+V +EL AEVDKL
Sbjct: 264 NGEALLLLQAEAEEGALVS*GR*EAHEPHDQARAWLLEHCPEACRASEVWQELQAEVDKL 443
Query: 437 SE 442
E
Sbjct: 444 PE 449
Score = 80.3 bits (169), Expect = 9e-014
Identities = 41/69 (59%), Positives = 47/69 (68%)
Frame = -1 / -3
Query: 465 MPLS*GLASDSLSTSAYNSFRTFEAQRVWEQSSSSHGHALLCDS*VSHPPQGTRAPFSAS 286
M L *G AS +LSTSA +S T EA + Q SSSH A C S* SH PQ TRAP SAS
Sbjct: 472 MHLF*GQASGNLSTSACSSCHTSEALQASGQCSSSHARAWSCGS*ASHLPQETRAPSSAS 293
Query: 285 ACSSKNASP 259
AC+S++ASP
Sbjct: 292 ACNSRSASP 266
Score = 24.4 bits (47), Expect(2) = 7e-017
Identities = 12/23 (52%), Positives = 18/23 (78%)
Frame = +2 / +3
Query: 515 EQVVSNCSAAARED***DQESME 583
+QVVS+C+ A ++** D ES+E
Sbjct: 522 KQVVSDCNKVAWKN**RD*ESLE 590
>gb|CW096980.1|CW096980 104_462_11002200_148_34353_082 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11002200, DNA
sequence
Length = 672
Score = 189 bits (407), Expect(2) = 1e-073
Identities = 81/105 (77%), Positives = 88/105 (83%)
Frame = +3 / +3
Query: 516 NRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPNTHKPLTEADHGGAAPTISTERT 695
NRWSQIA +LPGRTDNEIKNLWNS IKKKLRQKGIDPNTHKPL E +H AAPTISTERT
Sbjct: 354 NRWSQIATRLPGRTDNEIKNLWNSSIKKKLRQKGIDPNTHKPLAEVEHSKAAPTISTERT 533
Query: 696 SGSSDINPSSTGPLGNLSPLLSETAQSSMLMPVYDKNRAETPNLA 830
S SSD++PSS G LGNLS LLSETAQS L+P K+R ET +LA
Sbjct: 534 SESSDVDPSSGGALGNLSHLLSETAQSPELLPSARKHRKETTSLA 668
Score = 145 bits (312), Expect(2) = 1e-047
Identities = 72/105 (68%), Positives = 75/105 (71%)
Frame = -3 / -3
Query: 829 AKFGVSARFLSYTGISIDD*AVSLRRGLKFPRGPVLDGLMSLDPEVLSVLMVGAAPP*SA 650
AK VS R L G S D AVSLRR LK P P L+G SLD EVLSVL+VGAA S
Sbjct: 667 AKLVVSLRCLRALGSSSGDCAVSLRRWLKLPSAPPLEGSTSLDSEVLSVLIVGAALLCST 488
Query: 649 SVSGLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLF 515
S GLWVLGSMPFC SFFLM EF RFLISLSVLPG+ AI*DHLF
Sbjct: 487 SARGLWVLGSMPFCRSFFLMLEFQRFLISLSVLPGNLVAI*DHLF 353
Score = 110 bits (235), Expect(2) = 1e-073
Identities = 43/46 (93%), Positives = 46/46 (100%)
Frame = +3 / +1
Query: 384 LAGLQRCGKSCRLRWINYLRPDLKRGAFAQDEEDLIIELHAVLGNR 521
+AGLQRCGKSCRLRWINYLRPDLKRGAF+Q+EEDLIIELHAVLGNR
Sbjct: 130 MAGLQRCGKSCRLRWINYLRPDLKRGAFSQEEEDLIIELHAVLGNR 267
Score = 105 bits (225), Expect(2) = 2e-035
Identities = 56/105 (53%), Positives = 68/105 (64%)
Frame = -2 / -2
Query: 830 CQVWCFSTILVVHGHQH**LSRLAEEGAQVPQRTSA*WVDVAGP*GSLGADGGSCTAVIS 651
CQ F +L G Q *L LAE+ AQV + T+ * V++ G GSL D C AV +
Sbjct: 668 CQASSFFAMLTSTGQQLW*LCCLAEKMAQVAKCTTT*RVNITGLRGSLSTDCWRCFAVFN 489
Query: 650 LSKWLVGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPV 516
L K LVGVG++AFLP+LLLDA VP IL+L+IS Q CNLRPPV
Sbjct: 488 LGKGLVGVGVDAFLPELLLDA*VPEILNLVISSSRQPCCNLRPPV 354
Score = 96.8 bits (205), Expect(2) = 9e-022
Identities = 52/99 (52%), Positives = 56/99 (56%)
Frame = +1 / +1
Query: 535 QRSCQGGLIMRSRIYGTRASRRS*GRKALIPTPTSHLLRLITAVQLPPSAPREPQGPATS 714
Q+ C LI R RI GT+ASRRS GRKA PTPTS L RL TA Q S REP P
Sbjct: 373 QQGCLEELITRLRISGTQASRRSSGRKASTPTPTSPLPRLNTAKQRQQSVLREPLSPVML 552
Query: 715 THQALVLWGT*APSSARRLNHQC*CPCTTRIVLKHQTWH 831
T Q +V T*A SAR+ NHQ CP I K WH
Sbjct: 553 TLQVVVHLAT*AIFSARQHNHQSCCPVLVSIAKKLLAWH 669
Score = 88.1 bits (186), Expect(2) = 9e-017
Identities = 51/106 (48%), Positives = 60/106 (56%)
Frame = +2 / +2
Query: 515 EQVVSNCSAAARED***DQESMELVHQEEAEAERH*SQHPQATY*GXXXXXXXXXXXXEN 694
EQVVS+C+ A ++** D ES+EL HQEEA AERH QHPQA G EN
Sbjct: 353 EQVVSDCNKVAWKN**RD*ESLELKHQEEAPAERHRPQHPQAPCRG*TQQSSANNQY*EN 532
Query: 695 LRVQRHQPIKHWSSGELEPPPQRDGSIINADARVRQESC*NTKLGT 832
L VQ P K W + +LEP QRD +I A A+ S N LGT
Sbjct: 533 L*VQ*C*PFKWWCTWQLEPSSQRDSTITRAAAQCS*ASQRNY*LGT 670
Score = 67.0 bits (140), Expect(2) = 1e-047
Identities = 24/44 (54%), Positives = 34/44 (77%)
Frame = -2 / -1
Query: 521 PVPEDSVQLDDEVFFVLGECPSLEVWPQIVYPPQPTTLSAPLKP 390
PV + S++ +D+VFF+L EC S +V PQ++YPPQP L+ PLKP
Sbjct: 267 PVSQYSMKFNDKVFFLLRECTSFKVRPQVIYPPQPAALATPLKP 136
Score = 66.6 bits (139), Expect(2) = 2e-035
Identities = 32/46 (69%), Positives = 33/46 (71%)
Frame = -3 / -2
Query: 523 HLFPRTACXXXXXXXXSWANAPLLRSGLR*FIHLSLQLFPHL*SPA 386
+LFP TA S NAPLLRSGLR*FIHLSLQL PHL*SPA
Sbjct: 269 YLFPSTA*SSMIRSSSS*ENAPLLRSGLR*FIHLSLQLLPHL*SPA 132
Score = 37.7 bits (76), Expect = 0.62
Identities = 18/37 (48%), Positives = 21/37 (56%)
Frame = -1 / -1
Query: 723 LMG*CRWTLRFSRC*WWELHRRDQPQ*VACGCWDQCL 613
L G WT RFS+ * L QP+ ACGCW +CL
Sbjct: 561 LKGQHHWTQRFSQY*LLALLCCVQPRQGACGCWGRCL 451
Score = 33.1 bits (66), Expect(2) = 9e-022
Identities = 15/26 (57%), Positives = 17/26 (65%)
Frame = +1 / +2
Query: 391 GFKGAERVVG*GG*TI*GQTSREGHS 468
GF+G R G*GG* *G T +E HS
Sbjct: 137 GFRGVARAAG*GG*IT*GLTLKEVHS 214
Score = 24.9 bits (48), Expect(2) = 9e-017
Identities = 12/17 (70%), Positives = 14/17 (82%)
Frame = +2 / +3
Query: 392 ASKVRKEL*AEVDKLSE 442
AS+V +EL AEVDKL E
Sbjct: 138 ASEVWQELQAEVDKLPE 188
>gb|BG050179.1|BG050179 FM1_67_F11.b1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 464
Score = 197 bits (425), Expect(4) = 4e-073
Identities = 72/73 (98%), Positives = 73/73 (100%)
Frame = +3 / +1
Query: 228 WSSQVLHCVEMGRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCG 407
WSSQVLHC+EMGRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCG
Sbjct: 244 WSSQVLHCIEMGRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCG 423
Query: 408 KSCRLRWINYLRP 446
KSCRLRWINYLRP
Sbjct: 424 KSCRLRWINYLRP 462
Score = 169 bits (363), Expect(4) = 8e-068
Identities = 69/73 (94%), Positives = 70/73 (95%)
Frame = -2 / -3
Query: 446 WPQIVYPPQPTTLSAPLKPSEFGNRAPAAMAMLCYVIHEFLILLRGPEPLSQLLLVAARM 267
WPQIVYPPQPTTLSA L+PSEFGNR PAAMAMLCYVIHEFLILLRGPEPLSQLLLVAARM
Sbjct: 462 WPQIVYPPQPTTLSASLEPSEFGNRTPAAMAMLCYVIHEFLILLRGPEPLSQLLLVAARM 283
Query: 266 PPHLNAMQNLGAP 228
PPHLNAMQNL AP
Sbjct: 282 PPHLNAMQNLRAP 244
Score = 155 bits (333), Expect(4) = 7e-054
Identities = 67/76 (88%), Positives = 68/76 (89%)
Frame = -1 / -2
Query: 447 LASDSLSTSAYNSFRTFEAQRVWEQSSSSHGHALLCDS*VSHPPQGTRAPFSASACSSKN 268
LASDSLSTSAYNSFR F AQRVWEQ+SSSHGHALLCDS*VSHPPQGTRAPFS ACSSKN
Sbjct: 463 LASDSLSTSAYNSFRIFGAQRVWEQNSSSHGHALLCDS*VSHPPQGTRAPFSTFACSSKN 284
Query: 267 ASPSQRNAEPGSSNQT 220
ASPSQ NAEP SS T
Sbjct: 283 ASPSQCNAEPESSKFT 236
Score = 152 bits (326), Expect(3) = 3e-054
Identities = 65/72 (90%), Positives = 67/72 (93%)
Frame = +2 / +3
Query: 227 LELPGSALR*DGEAFLLLQAEAEKGALVP*GG*ETHESHNKAWPWLLELCSQTRWASKVR 406
LEL GSAL *DGEAFLLLQA+ EKGALVP*GG*ETHESHNKAWPWLLE CSQTRWA K+R
Sbjct: 243 LELSGSALH*DGEAFLLLQAKVEKGALVP*GG*ETHESHNKAWPWLLEFCSQTRWAPKMR 422
Query: 407 KEL*AEVDKLSE 442
KEL*AEVDKLSE
Sbjct: 423 KEL*AEVDKLSE 458
Score = 147 bits (316), Expect(2) = 2e-049
Identities = 68/73 (93%), Positives = 69/73 (94%)
Frame = +1 / +2
Query: 229 GAPRFCIALRWGGILAATSRS*ERGSGPLRRMRNS*IT*QSMAMAAGALFPNSLGFKGAE 408
GA RFCIALRWGGILAATS+S*ERGSGPLRRMRNS*IT*QSMAMAAG LFPNSLG K AE
Sbjct: 245 GALRFCIALRWGGILAATSKS*ERGSGPLRRMRNS*IT*QSMAMAAGVLFPNSLGSKDAE 424
Query: 409 RVVG*GG*TI*GQ 447
RVVG*GG*TI*GQ
Sbjct: 425 RVVG*GG*TI*GQ 463
Score = 86.8 bits (183), Expect(4) = 8e-068
Identities = 35/44 (79%), Positives = 39/44 (88%)
Frame = -3 / -3
Query: 133 LKQWEIAKVVATYIPMNGWASSEARIEQLHGCR*EISVESKERL 2
LK+WEIAK YIP++ WAS+EARIEQLHGCR*EISVESKERL
Sbjct: 141 LKEWEIAKFEVAYIPLDDWASAEARIEQLHGCR*EISVESKERL 10
Score = 86.3 bits (182), Expect(4) = 9e-037
Identities = 35/36 (97%), Positives = 35/36 (97%)
Frame = -3 / -1
Query: 448 SGLR*FIHLSLQLFPHL*SPASLGTELQQPWPCFVM 341
SGLR*FIHLSLQLFPHL SPASLGTELQQPWPCFVM
Sbjct: 464 SGLR*FIHLSLQLFPHLWSPASLGTELQQPWPCFVM 357
Score = 78.5 bits (165), Expect(4) = 4e-073
Identities = 31/42 (73%), Positives = 34/42 (80%)
Frame = +1 / +3
Query: 1 LAFPCFPLKSPICSHAVAQSWPQMKPNHSLVYKSLQPLQFPT 126
L FPC PLKSPIC+ AVAQ PQ+KPNH +VYK LQ LQFPT
Sbjct: 9 LTFPCSPLKSPICNRAVAQF*PQLKPNHPVVYKLLQTLQFPT 134
Score = 75.3 bits (158), Expect(3) = 3e-054
Identities = 32/44 (72%), Positives = 35/44 (79%)
Frame = +2 / +1
Query: 2 *PFLAFH*NLLSAAMQLLNPGLR*SPTIHWYISRYNLCNFPLLQ 133
*PFLA H*NLLSA +QLLN L *SP I WYIS + LCNFPLL+
Sbjct: 10 *PFLALH*NLLSATVQLLNSSLS*SPIIQWYISYFKLCNFPLLK 141
Score = 71.2 bits (149), Expect(2) = 2e-049
Identities = 32/41 (78%), Positives = 34/41 (82%)
Frame = +3 / +2
Query: 3 SLSLLSTEISYLQPCSCSILASDEAQPFIGI*VATTFAISH 125
+LSLLSTEISYLQPCSCSILAS EAQ GI* + FAISH
Sbjct: 11 NLSLLSTEISYLQPCSCSILASAEAQSSSGI*ATSNFAISH 133
Score = 66.6 bits (139), Expect(4) = 7e-054
Identities = 30/42 (71%), Positives = 32/42 (76%)
Frame = -1 / -1
Query: 126 SGKLQRL*RLIYQ*MVGLHLRPGLSNCMAADRRFQWKARKG* 1
SGKLQ L LIY M+GL LR LSNC ADRRFQW+ARKG*
Sbjct: 134 SGKLQSLK*LIYHWMIGLQLRLELSNCTVADRRFQWRARKG* 9
Score = 59.7 bits (124), Expect(4) = 9e-037
Identities = 29/40 (72%), Positives = 31/40 (77%)
Frame = -2 / -2
Query: 125 VGNCKGCSDLYTNEWLGFI*GQD*ATAWLQIGDFSGKQGK 6
VGNCK S LYT LGF *G +*ATA LQIGDFSG+QGK
Sbjct: 133 VGNCKV*SSLYTTG*LGFS*G*N*ATARLQIGDFSGEQGK 14
Score = 44.1 bits (90), Expect(4) = 9e-037
Identities = 18/20 (90%), Positives = 18/20 (90%)
Frame = -3 / -1
Query: 286 CL*QQECLPISTQCRTWELQ 227
CL*QQECLPIS QCRT ELQ
Sbjct: 302 CL*QQECLPISMQCRT*ELQ 243
Score = 34.5 bits (69), Expect(4) = 4e-073
Identities = 11/13 (84%), Positives = 12/13 (92%)
Frame = +3 / +2
Query: 189 LYIPQTCKLCEFG 227
+YIPQ CKLCEFG
Sbjct: 209 IYIPQACKLCEFG 247
Score = 31.3 bits (62), Expect(4) = 8e-068
Identities = 11/12 (91%), Positives = 11/12 (91%)
Frame = -3 / -3
Query: 226 PNSQSLQVCGMY 191
PNSQSLQ CGMY
Sbjct: 246 PNSQSLQACGMY 211
Score = 30.4 bits (60), Expect(4) = 8e-068
Identities = 11/13 (84%), Positives = 13/13 (100%)
Frame = -3 / -3
Query: 175 RTPSPVAQSFFDD 137
RTPSPVA+SFF+D
Sbjct: 189 RTPSPVARSFFND 151
Score = 26.3 bits (51), Expect(3) = 3e-054
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = +1 / +3
Query: 190 YTFRRPVSSVSL 225
YTF RPVSSV+L
Sbjct: 210 YTFHRPVSSVNL 245
Score = 25.8 bits (50), Expect(4) = 7e-054
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = -1 / -1
Query: 225 QTHRAYRSAECI 190
Q HRAYR ECI
Sbjct: 245 QIHRAYRPVECI 210
Score = 24.9 bits (48), Expect(4) = 4e-073
Identities = 11/13 (84%), Positives = 11/13 (84%)
Frame = +3 / +2
Query: 138 SSKKLCATGEGVR 176
S KKL ATGEGVR
Sbjct: 152 SLKKLRATGEGVR 190
Score = 22.6 bits (43), Expect(4) = 7e-054
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = -1 / -1
Query: 174 EHLLR*HRASS 142
EHLL+*H ASS
Sbjct: 188 EHLLQ*HEASS 156
Score = 22.1 bits (42), Expect(4) = 9e-037
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = -2 / -2
Query: 227 TKLTELTGLRNV 192
+K TELTGL NV
Sbjct: 247 SKFTELTGLWNV 212
>gb|BI098805.1|BI098805 IP1_33_D12.b1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 387
Score = 275 bits (595), Expect = 2e-072
Identities = 113/126 (89%), Positives = 120/126 (95%)
Frame = +3 / +3
Query: 450 LKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPN 629
LKRGAF+QDEE+LIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPN
Sbjct: 9 LKRGAFSQDEEELIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPN 188
Query: 630 THKPLTEADHGGAAPTISTERTSGSSDINPSSTGPLGNLSPLLSETAQSSMLMPVYDKNR 809
THKPLTEAD GAAPT+STERTSGSSD+NPSS G LGNLS LLSETAQSSMLMP+Y++NR
Sbjct: 189 THKPLTEADRSGAAPTVSTERTSGSSDVNPSSAGALGNLSHLLSETAQSSMLMPMYEQNR 368
Query: 810 AETPNL 827
ETPNL
Sbjct: 369 TETPNL 386
Score = 254 bits (549), Expect = 4e-066
Identities = 110/126 (87%), Positives = 116/126 (92%)
Frame = -2 / -2
Query: 827 QVWCFSTILVVHGHQH**LSRLAEEGAQVPQRTSA*WVDVAGP*GSLGADGGSCTAVISL 648
QV FS IL++HGHQH**LSRLAEE AQVPQ TS *WVD+AGP*GSLGADGGSC+A ISL
Sbjct: 386 QVRSFSAILLIHGHQH**LSRLAEEVAQVPQSTST*WVDIAGP*GSLGADGGSCSAAISL 207
Query: 647 SKWLVGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLG 468
SK LVGVGINAFLPQLLLDARVP*ILDLIISPPWQL CNLRPPV EDSVQL+DE+FFVLG
Sbjct: 206 SKGLVGVGINAFLPQLLLDARVP*ILDLIISPPWQLCCNLRPPVSEDSVQLNDELFFVLG 27
Query: 467 ECPSLE 450
ECPSLE
Sbjct: 26 ECPSLE 9
Score = 240 bits (518), Expect = 7e-062
Identities = 105/125 (84%), Positives = 105/125 (84%)
Frame = -3 / -3
Query: 826 KFGVSARFLSYTGISIDD*AVSLRRGLKFPRGPVLDGLMSLDPEVLSVLMVGAAPP*SAS 647
KFGVS RF SY GISIDD*AVSLRR LKFPR P LDGL SLDPEVLSVL VGAAP SAS
Sbjct: 385 KFGVSVRFCSYMGISIDD*AVSLRRWLKFPRAPALDGLTSLDPEVLSVLTVGAAPLRSAS 206
Query: 646 VSGLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWA 467
V GLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTAC SW
Sbjct: 205 VRGLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACSSMMSSSSSWE 26
Query: 466 NAPLL 452
NAPLL
Sbjct: 25 NAPLL 11
Score = 215 bits (463), Expect = 3e-054
Identities = 93/126 (73%), Positives = 95/126 (75%)
Frame = +1 / +1
Query: 451 SREGHSPXXXXXXXXXXXXXXXXXXXXXQRSCQGGLIMRSRIYGTRASRRS*GRKALIPT 630
SREGHSP Q SCQGGLIMRSRIYGTRASRRS*GRKALIPT
Sbjct: 10 SREGHSPKTKKSSSLSCTLSSETGGLKLQHSCQGGLIMRSRIYGTRASRRS*GRKALIPT 189
Query: 631 PTSHLLRLITAVQLPPSAPREPQGPATSTHQALVLWGT*APSSARRLNHQC*CPCTTRIV 810
PTS LLRLI A QLPPSAPREPQGPA STHQ LVLWGT*A SSARRLNHQC*CPC +RI
Sbjct: 190 PTSPLLRLIAAEQLPPSAPREPQGPAMSTHQVLVLWGT*ATSSARRLNHQC*CPCMSRIA 369
Query: 811 LKHQTW 828
LK +TW
Sbjct: 370 LKLRTW 387
Score = 171 bits (368), Expect = 3e-041
Identities = 80/104 (76%), Positives = 83/104 (79%)
Frame = +2 / +2
Query: 515 EQVVSNCSAAARED***DQESMELVHQEEAEAERH*SQHPQATY*GXXXXXXXXXXXXEN 694
+QVVSNCS AARED***DQESMELVHQEEAEAERH*SQHPQA Y*G EN
Sbjct: 74 KQVVSNCSTAARED***DQESMELVHQEEAEAERH*SQHPQAPY*G*SQRSSSHRQHREN 253
Query: 695 LRVQRHQPIKHWSSGELEPPPQRDGSIINADARVRQESC*NTKL 826
LRVQR QPIK W SGELEPPPQRDGSIINADA V ES *N++L
Sbjct: 254 LRVQRCQPIKCWCSGELEPPPQRDGSIINADAHV*AESH*NSEL 385
Score = 132 bits (283), Expect = 2e-029
Identities = 64/104 (61%), Positives = 64/104 (61%)
Frame = -1 / -1
Query: 828 PSLVFQHDSCRTRASALMIEPSRXXXXXXSPEDQCLMG*CRWTLRFSRC*WWELHRRDQP 649
PS FQ DS T ASALMIEPSR SPE Q LMG* RWTLRFSRC* WEL R DQP
Sbjct: 387 PSSEFQCDSAHTWASALMIEPSR*GGGSSSPEHQHLMG*HRWTLRFSRC*RWELLRCDQP 208
Query: 648 Q*VACGCWDQCLXXXXXXXXXXXXXXXXXXXXSLAAALQFETTC 517
Q* ACGCWDQCL SLAA LQFETTC
Sbjct: 207 Q*GACGCWDQCLSASASS*CTSSIDS*SHYQSSLAAVLQFETTC 76
>gb|CW096979.1|CW096979 104_462_11002200_116_34349_082 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11002200, DNA
sequence
Length = 565
Score = 231 bits (498), Expect(2) = 1e-071
Identities = 96/132 (72%), Positives = 111/132 (84%)
Frame = +3 / -1
Query: 516 NRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPNTHKPLTEADHGGAAPTISTERT 695
NRWSQIA +LPGRTDNEIKNLWNS IKKKLRQKGIDPNTHKPL E +H AAPTISTERT
Sbjct: 397 NRWSQIATRLPGRTDNEIKNLWNSSIKKKLRQKGIDPNTHKPLAEVEHSKAAPTISTERT 218
Query: 696 SGSSDINPSSTGPLGNLSPLLSETAQSSMLMPVYDKNRAETPNLARPKLPPKELFLEQLT 875
S SSD++PSS G LGNLS LLSETAQS L+PV K+R ET +LA ++PPKELFL+QL
Sbjct: 217 SESSDVDPSSGGALGNLSHLLSETAQSPELLPVLGKHRKETTSLAHLRVPPKELFLDQLV 38
Query: 876 AGHESPSTCHSS 911
+GHE+ ++C S+
Sbjct: 37 SGHENLTSCRST 2
Score = 171 bits (367), Expect(2) = 3e-045
Identities = 86/131 (65%), Positives = 92/131 (70%)
Frame = -3 / +3
Query: 907 EWQVDGLSCPAVSCSRNSSFGGSLGRAKFGVSARFLSYTGISIDD*AVSLRRGLKFPRGP 728
E Q+ S P S SRN+SFGG+L AK VS R L TG S D AVSLRR LK P P
Sbjct: 6 ERQLVRFS*PETSWSRNNSFGGTLRCAKLVVSLRCLPSTGSSSGDCAVSLRRWLKLPSAP 185
Query: 727 VLDGLMSLDPEVLSVLMVGAAPP*SASVSGLWVLGSMPFCLSFFLMHEFHRFLISLSVLP 548
L+G SLD EVLSVL+VGAA S S GLWVLGSMPFC SFFLM EF RFLISLSVLP
Sbjct: 186 PLEGSTSLDSEVLSVLIVGAALLCSTSARGLWVLGSMPFCRSFFLMLEFQRFLISLSVLP 365
Query: 547 GSCAAI*DHLF 515
G+ AI*DHLF
Sbjct: 366 GNLVAI*DHLF 398
Score = 112 bits (239), Expect = 2e-023
Identities = 61/126 (48%), Positives = 69/126 (54%)
Frame = +1 / -2
Query: 535 QRSCQGGLIMRSRIYGTRASRRS*GRKALIPTPTSHLLRLITAVQLPPSAPREPQGPATS 714
Q+ C LI R RI GT+ASRRS GRKA PTPTS L RL TA Q S REP P
Sbjct: 378 QQGCLEELITRLRISGTQASRRSSGRKASTPTPTSPLPRLNTAKQRQQSVLREPLSPVML 199
Query: 715 THQALVLWGT*APSSARRLNHQC*CPCTTRIVLKHQTWHALSCHQRSCSWSSLLLDTRVH 894
T Q +V T*A SAR+ NHQ C C+ I K WH C +RS S +SL L +
Sbjct: 198 TLQVVVHLAT*AIFSARQHNHQSCCQCSVSIAKKLLAWHI*GCRRRSYSLTSLFLVMKTS 19
Query: 895 QPATHQ 912
A Q
Sbjct: 18 LAAAQQ 1
Score = 106 bits (227), Expect(2) = 7e-025
Identities = 56/105 (53%), Positives = 68/105 (64%)
Frame = -2 / +2
Query: 830 CQVWCFSTILVVHGHQH**LSRLAEEGAQVPQRTSA*WVDVAGP*GSLGADGGSCTAVIS 651
CQ F +L H Q *L LAE+ AQV + T+ * V++ G GSL D C AV +
Sbjct: 83 CQASSFFAMLTEHWQQLW*LCCLAEKMAQVAKCTTT*RVNITGLRGSLSTDCWRCFAVFN 262
Query: 650 LSKWLVGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPV 516
L K LVGVG++AFLP+LLLDA VP IL+L+IS Q CNLRPPV
Sbjct: 263 LGKGLVGVGVDAFLPELLLDA*VPEILNLVISSSRQPCCNLRPPV 397
Score = 102 bits (218), Expect = 2e-020
Identities = 60/131 (45%), Positives = 72/131 (54%)
Frame = +2 / -3
Query: 515 EQVVSNCSAAARED***DQESMELVHQEEAEAERH*SQHPQATY*GXXXXXXXXXXXXEN 694
EQVVS+C+ A ++** D ES+EL HQEEA AERH QHPQA G EN
Sbjct: 398 EQVVSDCNKVAWKN**RD*ESLELKHQEEAPAERHRPQHPQAPCRG*TQQSSANNQY*EN 219
Query: 695 LRVQRHQPIKHWSSGELEPPPQRDGSIINADARVRQESC*NTKLGTP*AATKGAVPGAAY 874
L VQ P K W + +LEP QRD +I A A R S N LGT A +G +P A
Sbjct: 218 L*VQ*C*PFKWWCTWQLEPSSQRDSTITRAAASAR*ASQRNY*LGTSKGAAEGVIP*PAC 39
Query: 875 CWTRESINLPL 907
W+ + LPL
Sbjct: 38 FWS*KPH*LPL 6
Score = 62.5 bits (130), Expect(2) = 1e-071
Identities = 25/27 (92%), Positives = 27/27 (100%)
Frame = +3 / -2
Query: 441 RPDLKRGAFAQDEEDLIIELHAVLGNR 521
RPDLKRGAF+Q+EEDLIIELHAVLGNR
Sbjct: 564 RPDLKRGAFSQEEEDLIIELHAVLGNR 484
Score = 37.7 bits (76), Expect = 0.62
Identities = 18/37 (48%), Positives = 21/37 (56%)
Frame = -1 / +1
Query: 723 LMG*CRWTLRFSRC*WWELHRRDQPQ*VACGCWDQCL 613
L G WT RFS+ * L QP+ ACGCW +CL
Sbjct: 190 LKGQHHWTQRFSQY*LLALLCCVQPRQGACGCWGRCL 300
Score = 34.1 bits (68), Expect(2) = 3e-045
Identities = 13/27 (48%), Positives = 20/27 (74%)
Frame = -2 / +1
Query: 521 PVPEDSVQLDDEVFFVLGECPSLEVWP 441
PV + S++ +D+VFF+L EC S +V P
Sbjct: 484 PVSQYSMKFNDKVFFLLRECTSFKVRP 564
Score = 29.9 bits (59), Expect(2) = 7e-025
Identities = 15/28 (53%), Positives = 16/28 (57%)
Frame = -3 / +2
Query: 523 HLFPRTACXXXXXXXXSWANAPLLRSGL 440
+LFP TA S NAPLLRSGL
Sbjct: 482 YLFPSTA*SSMIRSSSS*ENAPLLRSGL 565
>gb|CD235285.1|CD235285 SS1_28_H11.g1_A012 Salt-stressed seedlings Sorghum bicolor cDNA
clone SS1_28_H11_A012 5', mRNA sequence
Length = 650
Score = 266 bits (576), Expect = 7e-070
Identities = 100/122 (81%), Positives = 113/122 (92%)
Frame = +3 / +1
Query: 282 KQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRG 461
+QKLRKGLWSPEEDEKL NHI ++G GCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRG
Sbjct: 199 QQKLRKGLWSPEEDEKLYNHIIRYGVGCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRG 378
Query: 462 AFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPNTHKP 641
+F+Q EED I+ LH +LGNRWSQIA+ LPGRTDNEIKN WNSC+KKKLRQ+GIDP+THKP
Sbjct: 379 SFSQQEEDAIVGLHEILGNRWSQIASHLPGRTDNEIKNFWNSCLKKKLRQRGIDPSTHKP 558
Query: 642 LT 647
++
Sbjct: 559 IS 564
Score = 134 bits (287), Expect = 5e-030
Identities = 62/122 (50%), Positives = 83/122 (68%)
Frame = -2 / -3
Query: 638 LVGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECP 459
LVG G++A L QLLL+A VP +LDL++ P Q+R +LRPPVP+D V+ DD V +L E
Sbjct: 555 LVGAGVDAALAQLLLEAAVPEVLDLVVRPARQVRRDLRPPVPQDLVEADDGVLLLLREAA 376
Query: 458 SLEVWPQIVYPPQPTTLSAPLKPSEFGNRAPAAMAMLCYVIHEFLILLRGPEPLSQLLLV 279
L+V Q+V PP+ L+APL+P E G+ APA A+ V+ E L+ L PE L+QLLL
Sbjct: 375 PLQVGAQVVDPPKSAALAAPLQPCELGHGAPAPDAVADDVVVELLVFLGRPESLAQLLLH 196
Query: 278 AA 273
AA
Sbjct: 195 AA 190
Score = 123 bits (264), Expect = 7e-027
Identities = 58/96 (60%), Positives = 60/96 (62%)
Frame = -3 / -1
Query: 640 GLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANA 461
GLWVLGSMP SFFL F +FLISLSV PG C AI DHLFPR +
Sbjct: 557 GLWVLGSMPRWRSFFLRQLFQKFLISLSVRPGKCDAICDHLFPRISWRPTMASSSCCEKL 378
Query: 460 PLLRSGLR*FIHLSLQLFPHL*SPASLGTELQQPWP 353
P RSG R* IH S QL PHL SPASLGTELQ P P
Sbjct: 377 PRFRSGRR*LIHRSRQLLPHLCSPASLGTELQHPTP 270
Score = 42.3 bits (86), Expect(2) = 3e-009
Identities = 25/54 (46%), Positives = 30/54 (55%)
Frame = +1 / +2
Query: 274 AATSRS*ERGSGPLRRMRNS*IT*QSMAMAAGALFPNSLGFKGAERVVG*GG*T 435
AA SRS R SG R+ R+S T + A AGA P+S G +GA R GG T
Sbjct: 191 AACSRSCARDSGRPRKTRSSTTTSSATASGAGAPCPSSQGCRGAARAADFGGST 352
Score = 41.4 bits (84), Expect(2) = 3e-009
Identities = 22/42 (52%), Positives = 26/42 (61%)
Frame = +2 / +3
Query: 515 EQVVSNCSAAARED***DQESMELVHQEEAEAERH*SQHPQA 640
EQVV++ A A D DQE +E + QEEA RH QHPQA
Sbjct: 432 EQVVADRVALAGPDGQRDQELLEQLPQEEAAPARHRPQHPQA 557
Score = 40.5 bits (82), Expect(2) = 0.008
Identities = 22/56 (39%), Positives = 29/56 (51%)
Frame = -1 / -2
Query: 450 GLASDSLSTSAYNSFRTFEAQRVWEQSSSSHGHALLCDS*VSHPPQGTRAPFSASA 283
G + S ST +S RT A R W +SSS+ + C S P+ TR P +ASA
Sbjct: 367 GRGAGS*STEVGSSCRTSAALRAWARSSSTRRRSG*CGCRASRLPRATRVPCAASA 200
Score = 39.6 bits (80), Expect(2) = 1e-007
Identities = 18/35 (51%), Positives = 21/35 (60%)
Frame = +1 / +2
Query: 535 QRSCQGGLIMRSRIYGTRASRRS*GRKALIPTPTS 639
+R+C+ G RSR GT ASRRS A P PTS
Sbjct: 452 RRTCRAGRTTRSRTSGTAASRRSCASAASTPAPTS 556
Score = 39.1 bits (79), Expect(2) = 1e-007
Identities = 22/51 (43%), Positives = 31/51 (60%)
Frame = +2 / +3
Query: 284 AEAEKGALVP*GG*ETHESHNKAWPWLLELCSQTRWASKVRKEL*AEVDKL 436
AEA +G LV G E + H+ +LEL +Q R A++VR+EL VD+L
Sbjct: 201 AEAAQGTLVARGRREALQPHHPLRRRVLELRAQARRAAEVRQELPTSVDQL 353
Score = 24.9 bits (48), Expect(2) = 0.008
Identities = 6/8 (75%), Positives = 7/8 (87%)
Frame = -1 / -2
Query: 639 ACGCWDQC 616
ACGCW +C
Sbjct: 556 ACGCWGRC 533
>gb|CX616786.1|CX616786 GABR1_29_H12.g1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_29_H12_A002 5', mRNA sequence
Length = 745
Score = 266 bits (576), Expect = 7e-070
Identities = 100/122 (81%), Positives = 113/122 (92%)
Frame = +3 / +3
Query: 282 KQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRG 461
+QKLRKGLWSPEEDEKL NHI ++G GCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRG
Sbjct: 354 QQKLRKGLWSPEEDEKLYNHIIRYGVGCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRG 533
Query: 462 AFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPNTHKP 641
+F+Q EED I+ LH +LGNRWSQIA+ LPGRTDNEIKN WNSC+KKKLRQ+GIDP+THKP
Sbjct: 534 SFSQQEEDAIVGLHEILGNRWSQIASHLPGRTDNEIKNFWNSCLKKKLRQRGIDPSTHKP 713
Query: 642 LT 647
++
Sbjct: 714 IS 719
Score = 134 bits (287), Expect = 5e-030
Identities = 62/122 (50%), Positives = 83/122 (68%)
Frame = -2 / -3
Query: 638 LVGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECP 459
LVG G++A L QLLL+A VP +LDL++ P Q+R +LRPPVP+D V+ DD V +L E
Sbjct: 710 LVGAGVDAALAQLLLEAAVPEVLDLVVRPARQVRRDLRPPVPQDLVEADDGVLLLLREAA 531
Query: 458 SLEVWPQIVYPPQPTTLSAPLKPSEFGNRAPAAMAMLCYVIHEFLILLRGPEPLSQLLLV 279
L+V Q+V PP+ L+APL+P E G+ APA A+ V+ E L+ L PE L+QLLL
Sbjct: 530 PLQVGAQVVDPPKSAALAAPLQPCELGHGAPAPDAVADDVVVELLVFLGRPESLAQLLLH 351
Query: 278 AA 273
AA
Sbjct: 350 AA 345
Score = 123 bits (264), Expect = 7e-027
Identities = 58/96 (60%), Positives = 60/96 (62%)
Frame = -3 / -1
Query: 640 GLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANA 461
GLWVLGSMP SFFL F +FLISLSV PG C AI DHLFPR +
Sbjct: 712 GLWVLGSMPRWRSFFLRQLFQKFLISLSVRPGKCDAICDHLFPRISWRPTMASSSCCEKL 533
Query: 460 PLLRSGLR*FIHLSLQLFPHL*SPASLGTELQQPWP 353
P RSG R* IH S QL PHL SPASLGTELQ P P
Sbjct: 532 PRFRSGRR*LIHRSRQLLPHLCSPASLGTELQHPTP 425
Score = 42.3 bits (86), Expect(2) = 3e-009
Identities = 25/54 (46%), Positives = 30/54 (55%)
Frame = +1 / +1
Query: 274 AATSRS*ERGSGPLRRMRNS*IT*QSMAMAAGALFPNSLGFKGAERVVG*GG*T 435
AA SRS R SG R+ R+S T + A AGA P+S G +GA R GG T
Sbjct: 346 AACSRSCARDSGRPRKTRSSTTTSSATASGAGAPCPSSQGCRGAARAADFGGST 507
Score = 41.4 bits (84), Expect(2) = 3e-009
Identities = 22/42 (52%), Positives = 26/42 (61%)
Frame = +2 / +2
Query: 515 EQVVSNCSAAARED***DQESMELVHQEEAEAERH*SQHPQA 640
EQVV++ A A D DQE +E + QEEA RH QHPQA
Sbjct: 587 EQVVADRVALAGPDGQRDQELLEQLPQEEAAPARHRPQHPQA 712
Score = 40.5 bits (82), Expect(2) = 0.009
Identities = 22/56 (39%), Positives = 29/56 (51%)
Frame = -1 / -2
Query: 450 GLASDSLSTSAYNSFRTFEAQRVWEQSSSSHGHALLCDS*VSHPPQGTRAPFSASA 283
G + S ST +S RT A R W +SSS+ + C S P+ TR P +ASA
Sbjct: 522 GRGAGS*STEVGSSCRTSAALRAWARSSSTRRRSG*CGCRASRLPRATRVPCAASA 355
Score = 39.6 bits (80), Expect(2) = 1e-007
Identities = 18/35 (51%), Positives = 21/35 (60%)
Frame = +1 / +1
Query: 535 QRSCQGGLIMRSRIYGTRASRRS*GRKALIPTPTS 639
+R+C+ G RSR GT ASRRS A P PTS
Sbjct: 607 RRTCRAGRTTRSRTSGTAASRRSCASAASTPAPTS 711
Score = 39.1 bits (79), Expect(2) = 1e-007
Identities = 22/51 (43%), Positives = 31/51 (60%)
Frame = +2 / +2
Query: 284 AEAEKGALVP*GG*ETHESHNKAWPWLLELCSQTRWASKVRKEL*AEVDKL 436
AEA +G LV G E + H+ +LEL +Q R A++VR+EL VD+L
Sbjct: 356 AEAAQGTLVARGRREALQPHHPLRRRVLELRAQARRAAEVRQELPTSVDQL 508
Score = 24.9 bits (48), Expect(2) = 0.009
Identities = 6/8 (75%), Positives = 7/8 (87%)
Frame = -1 / -2
Query: 639 ACGCWDQC 616
ACGCW +C
Sbjct: 711 ACGCWGRC 688
>gb|BI098521.1|BI098521 IP1_33_D12.g1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 518
Score = 140 bits (300), Expect(5) = 6e-066
Identities = 59/72 (81%), Positives = 64/72 (88%)
Frame = -2 / -2
Query: 1811 RVQKENINFQEKGKETLEHTFLCILLQLLMPGLSFP*YCQLFN*GTAVEDDFCINLTYLC 1632
RVQKE F+ K KETLE TFLCILL LLMPGLSFP*YCQ+FN*GTAVED+FCINL YLC
Sbjct: 283 RVQKETSIFKRKKKETLERTFLCILLPLLMPGLSFP*YCQVFN*GTAVEDNFCINLMYLC 104
Query: 1631 EQFSIILPTNL* 1596
+QFSI+LPTNL*
Sbjct: 103 KQFSIVLPTNL* 68
Score = 138 bits (295), Expect(4) = 9e-061
Identities = 59/72 (81%), Positives = 63/72 (87%)
Frame = -1 / -1
Query: 1812 SCTEGKHQFSRERKGDSRTYFPMHPAATSNARAVLSLILPALQLRNSCGG*FLYQLNVSM 1633
SCTEG F + KGDSRTYF MH AATSNARAVLSLILP LQLRNSCGG*FLYQLNVSM
Sbjct: 284 SCTEGNINFQEKEKGDSRTYFSMHSAATSNARAVLSLILPGLQLRNSCGG*FLYQLNVSM 105
Query: 1632 *AIQHNSAHESL 1597
*AIQH+S+H+SL
Sbjct: 104 *AIQHSSSHKSL 69
Score = 138 bits (295), Expect(5) = 2e-069
Identities = 59/72 (81%), Positives = 62/72 (86%)
Frame = +1 / +3
Query: 1597 QRFVGRIMLNCSHRYVKLIQKSSSTAVPQLKSWQYQGKDSPGIRSCSRMHRKVCSRVSFP 1776
QRFVGR MLNC HRY+KLIQK SSTAVPQLK+WQYQGKDSPGIRS SRMHRKV SRVSF
Sbjct: 69 QRFVGRTMLNCLHRYIKLIQKLSSTAVPQLKTWQYQGKDSPGIRSGSRMHRKVRSRVSFF 248
Query: 1777 FS*KLMFSFCTR 1812
F K+ SFCTR
Sbjct: 249 FLLKIDVSFCTR 284
Score = 133 bits (285), Expect(4) = 8e-057
Identities = 59/80 (73%), Positives = 65/80 (81%)
Frame = +2 / +1
Query: 1574 EEAETRIFRDSWAELC*IAHIDTLS*YRNHPPQLFLS*RAGNIKERTALALEVAAGCIGK 1753
++ + +FRD W ELC*IA+IDTLS*YRN+PPQLFLS*R GNIKERTALALEVAA CI K
Sbjct: 46 QQKQKLVFRDLWEELC*IAYIDTLS*YRNYPPQLFLS*RPGNIKERTALALEVAAECIEK 225
Query: 1754 YVLESPFLSLEN*CFPSVHD 1813
YVLESPF FPSVHD
Sbjct: 226 YVLESPFSFS*KLMFPSVHD 285
Score = 130 bits (278), Expect(4) = 5e-056
Identities = 56/73 (76%), Positives = 63/73 (86%)
Frame = -3 / -3
Query: 1813 VVYRRKTSIFKRKERRL*NILSYASCCNF*CQGCPFLDIASSSTEEQLWRMISVST*RIY 1634
VVYRRK + ++RRL*N+L YA CC+F*CQGCPFLDIA SSTEEQLWR+ISVST* IY
Sbjct: 285 VVYRRKHQFSRERKRRL*NVLFYAFCCHF*CQGCPFLDIARSSTEEQLWRIISVST*CIY 106
Query: 1633 VSNSA*FCPRISE 1595
VSNSA*F P+ISE
Sbjct: 105 VSNSA*FFPQISE 67
Score = 105 bits (223), Expect(5) = 3e-040
Identities = 46/59 (77%), Positives = 54/59 (91%)
Frame = +3 / +2
Query: 1578 KQKLVFSEIRGQNYAELLT*IR*VDTEIILHSCSSVEELAISRKGQPWH*KLQQDA*ES 1754
+ + ++SEI G+NYAELLT*I *VDTEIILHSCSSVE+LAISRKGQPWH*K QQ+A*+S
Sbjct: 50 RSRNLYSEICGKNYAELLT*IH*VDTEIILHSCSSVEDLAISRKGQPWH*KWQQNA*KS 226
Score = 69.8 bits (146), Expect(4) = 8e-057
Identities = 30/50 (60%), Positives = 32/50 (64%)
Frame = +3 / +1
Query: 1842 LSGGN*INIDSHRQKCMCR*LSTCK*PQTFNCCHACPCKLIIACCIFHFF 1991
LSGGN*INIDSH Q CMCR*LS CK PQTF ++ FHFF
Sbjct: 319 LSGGN*INIDSHGQNCMCR*LSPCKQPQTFQLLPCTSMQINYCMLYFHFF 468
Score = 66.1 bits (138), Expect(5) = 6e-066
Identities = 25/29 (86%), Positives = 25/29 (86%)
Frame = -3 / -1
Query: 1930 KVWGYLHVESYRHMHFCLWLSIFI*FPPE 1844
KVWG LH ESYRHM FC WLSIFI*FPPE
Sbjct: 407 KVWGCLHGESYRHMQFCPWLSIFI*FPPE 321
Score = 62.9 bits (131), Expect(4) = 9e-061
Identities = 24/32 (75%), Positives = 26/32 (81%)
Frame = -1 / -2
Query: 1929 KFGATCTLRATDTCIFAYGYLYLFNFHQREQK 1834
KFGA C +RATDTC FA+G LYLFNFHQR K
Sbjct: 406 KFGAACMVRATDTCNFAHGCLYLFNFHQRVNK 311
Score = 61.1 bits (127), Expect(4) = 5e-056
Identities = 26/31 (83%), Positives = 29/31 (93%)
Frame = -2 / -3
Query: 1934 VESLGLLAR*ELPTHAFLPMAIYIYLISTRE 1842
++SLGLLA *ELPTHA LPMA+YIYLISTRE
Sbjct: 411 LKSLGLLAW*ELPTHAILPMAVYIYLISTRE 319
Score = 60.6 bits (126), Expect(5) = 2e-069
Identities = 23/30 (76%), Positives = 26/30 (86%)
Frame = +2 / +3
Query: 1841 SLWWKLNKYR*P*AKMHVSVALNVQVAPNF 1930
+LWWKLNKYR P AK+HVSVAL +Q APNF
Sbjct: 318 TLWWKLNKYRQPWAKLHVSVALTMQAAPNF 407
Score = 54.7 bits (113), Expect(5) = 2e-069
Identities = 21/26 (80%), Positives = 25/26 (96%)
Frame = +3 / +1
Query: 1527 ENI*ALCSTTWNRADQKKQKLVFSEI 1604
ENI*ALCST+WNRADQ+KQKLVF ++
Sbjct: 1 ENI*ALCSTSWNRADQQKQKLVFRDL 78
Score = 54.2 bits (112), Expect(5) = 2e-069
Identities = 19/24 (79%), Positives = 20/24 (83%)
Frame = +3 / +2
Query: 1920 PQTFNCCHACPCKLIIACCIFHFF 1991
P+ FNCCHA PCKLIIACCIF F
Sbjct: 398 PKLFNCCHARPCKLIIACCIFISF 469
Score = 51.0 bits (105), Expect(5) = 6e-066
Identities = 19/24 (79%), Positives = 20/24 (83%)
Frame = -2 / -2
Query: 1991 KEMKNTTCNN*FAWTCMAAVESLG 1920
K +NTTCNN*FAWTCMAAVE G
Sbjct: 469 KRNENTTCNN*FAWTCMAAVEKFG 398
Score = 49.2 bits (101), Expect(5) = 3e-040
Identities = 18/20 (90%), Positives = 18/20 (90%)
Frame = +2 / +1
Query: 1928 FQLLPCMSMQINYCMLYFSF 1987
FQLLPC SMQINYCMLYF F
Sbjct: 406 FQLLPCTSMQINYCMLYFHF 465
Score = 49.2 bits (101), Expect(4) = 8e-057
Identities = 19/22 (86%), Positives = 19/22 (86%)
Frame = +1 / +2
Query: 1528 RISRHYVPPHGTEQIRRSRNSY 1593
RISRHYVPPHGTE I RSRN Y
Sbjct: 2 RISRHYVPPHGTELISRSRNLY 67
Score = 48.3 bits (99), Expect(4) = 9e-061
Identities = 20/26 (76%), Positives = 21/26 (80%)
Frame = -3 / -3
Query: 1990 KK*KIQHAIINLHGHAWQQLKVWGYL 1913
K+ KIQHAIINLHG AWQQLK G L
Sbjct: 468 KEMKIQHAIINLHGRAWQQLKSLGLL 391
Score = 45.5 bits (93), Expect(5) = 6e-066
Identities = 20/24 (83%), Positives = 21/24 (87%)
Frame = -3 / -1
Query: 1600 SENTSFCFF*SALFHVVEHNA*IF 1529
S NTSFCF *SALFH VEH+A*IF
Sbjct: 74 SLNTSFCFC*SALFHEVEHSA*IF 3
Score = 45.1 bits (92), Expect = 0.004
Identities = 18/22 (81%), Positives = 20/22 (90%)
Frame = +1 / +3
Query: 1915 SSPKLSTAAMHVHAN*LLHVVF 1980
++P STAAMHVHAN*LLHVVF
Sbjct: 393 AAPNFSTAAMHVHAN*LLHVVF 458
Score = 44.6 bits (91), Expect(4) = 9e-061
Identities = 18/25 (72%), Positives = 22/25 (88%)
Frame = -1 / -2
Query: 1602 SLKIRVSASSDLLCSMWWNIMPRYS 1528
+L I+VSAS+D LCSM WNI+PRYS
Sbjct: 76 NL*IQVSASADQLCSMRWNIVPRYS 2
Score = 44.1 bits (90), Expect(4) = 5e-056
Identities = 19/23 (82%), Positives = 21/23 (91%)
Frame = -2 / -3
Query: 1595 KYEFLLLLICSVPCGGT*CLDIL 1527
+Y+FLLLLI SVP GGT*CLDIL
Sbjct: 69 EYKFLLLLISSVP*GGT*CLDIL 1
Score = 42.3 bits (86), Expect(4) = 5e-056
Identities = 17/18 (94%), Positives = 18/18 (100%)
Frame = -1 / -1
Query: 1980 KYNMQ*LICMDMHGSS*K 1927
KYNMQ*LICMD+HGSS*K
Sbjct: 458 KYNMQ*LICMDVHGSS*K 405
Score = 40.9 bits (83), Expect = 0.067
Identities = 23/53 (43%), Positives = 26/53 (49%)
Frame = +1 / +2
Query: 1834 FLFSLVEXXXXXXXXGKNACVGSSQRASSPKLSTAAMHVHAN*LLHVVFFISF 1992
F+ SLVE GK ACVGSS ASSPKL ++ FISF
Sbjct: 311 FVHSLVEIK*I*TAMGKIACVGSSHHASSPKLFNCCHARPCKLIIACCIFISF 469
Score = 38.2 bits (77), Expect(5) = 3e-040
Identities = 18/24 (75%), Positives = 18/24 (75%)
Frame = +2 / +3
Query: 1529 EYLGIMFHHMEQSRSEEAETRIFR 1600
EYLG MFH MEQS S EAET I R
Sbjct: 3 EYLGTMFHLMEQS*SAEAETCIQR 74
Score = 33.1 bits (66), Expect(5) = 2e-069
Identities = 12/13 (92%), Positives = 13/13 (100%)
Frame = +1 / +3
Query: 1810 RLNFCIFEFLFSL 1848
RLNFCIFEFLF+L
Sbjct: 285 RLNFCIFEFLFTL 323
Score = 28.1 bits (55), Expect(4) = 8e-057
Identities = 11/12 (91%), Positives = 11/12 (91%)
Frame = +2 / +1
Query: 1811 D*TFAYLSFCSL 1846
D TFAYLSFCSL
Sbjct: 286 DSTFAYLSFCSL 321
Score = 26.3 bits (51), Expect(5) = 6e-066
Identities = 10/13 (76%), Positives = 12/13 (92%)
Frame = -1 / -1
Query: 1848 QREQKLKYAKVQS 1810
+ EQKLKYAKV+S
Sbjct: 323 ESEQKLKYAKVES 285
Score = 25.4 bits (49), Expect(5) = 3e-040
Identities = 12/16 (75%), Positives = 13/16 (81%)
Frame = +3 / +2
Query: 1800 LLYTTELLHI*VFVLS 1847
L TT+LLHI*VFV S
Sbjct: 275 LYTTTQLLHI*VFVHS 322
Score = 23.5 bits (45), Expect(5) = 3e-040
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +2 / +2
Query: 1772 FLSLEN*CF 1798
FLSLEN*CF
Sbjct: 245 FLSLEN*CF 271
>gb|BF655926.1|BF655926 FM1_42_F08.g1_A003 Floral-Induced Meristem 1 (FM1) Sorghum propinquum
cDNA, mRNA sequence
Length = 536
Score = 142 bits (305), Expect(5) = 2e-063
Identities = 60/72 (83%), Positives = 64/72 (88%)
Frame = -2 / -2
Query: 1811 RVQKENINFQEKGKETLEHTFLCILLQLLMPGLSFP*YCQLFN*GTAVEDDFCINLTYLC 1632
RVQKE F+ K KETLE TFLCILL LLMPGLSFP*YCQ+FN*GTAVEDDFCINL YLC
Sbjct: 265 RVQKETSIFKRKKKETLERTFLCILLPLLMPGLSFP*YCQVFN*GTAVEDDFCINLMYLC 86
Query: 1631 EQFSIILPTNL* 1596
+QFSI+LPTNL*
Sbjct: 85 KQFSIVLPTNL* 50
Score = 140 bits (301), Expect(5) = 7e-067
Identities = 60/72 (83%), Positives = 63/72 (87%)
Frame = +1 / +3
Query: 1597 QRFVGRIMLNCSHRYVKLIQKSSSTAVPQLKSWQYQGKDSPGIRSCSRMHRKVCSRVSFP 1776
QRFVGR MLNC HRY+KLIQKSSSTAVPQLK+WQYQGKDSPGIRS SRMHRKV SRVSF
Sbjct: 51 QRFVGRTMLNCLHRYIKLIQKSSSTAVPQLKTWQYQGKDSPGIRSGSRMHRKVRSRVSFF 230
Query: 1777 FS*KLMFSFCTR 1812
F K+ SFCTR
Sbjct: 231 FLLKIDVSFCTR 266
Score = 138 bits (295), Expect(4) = 6e-057
Identities = 59/72 (81%), Positives = 63/72 (87%)
Frame = -1 / -1
Query: 1812 SCTEGKHQFSRERKGDSRTYFPMHPAATSNARAVLSLILPALQLRNSCGG*FLYQLNVSM 1633
SCTEG F + KGDSRTYF MH AATSNARAVLSLILP LQLRNSCGG*FLYQLNVSM
Sbjct: 266 SCTEGNINFQEKEKGDSRTYFSMHSAATSNARAVLSLILPGLQLRNSCGG*FLYQLNVSM 87
Query: 1632 *AIQHNSAHESL 1597
*AIQH+S+H+SL
Sbjct: 86 *AIQHSSSHKSL 51
Score = 136 bits (291), Expect(4) = 3e-053
Identities = 60/80 (75%), Positives = 65/80 (81%)
Frame = +2 / +1
Query: 1574 EEAETRIFRDSWAELC*IAHIDTLS*YRNHPPQLFLS*RAGNIKERTALALEVAAGCIGK 1753
++ + +FRD W ELC*IA+IDTLS*YRNHPPQLFLS*R GNIKERTALALEVAA CI K
Sbjct: 28 QQKQKLVFRDLWEELC*IAYIDTLS*YRNHPPQLFLS*RPGNIKERTALALEVAAECIEK 207
Query: 1754 YVLESPFLSLEN*CFPSVHD 1813
YVLESPF FPSVHD
Sbjct: 208 YVLESPFSFS*KLMFPSVHD 267
Score = 132 bits (282), Expect(4) = 9e-053
Identities = 57/73 (78%), Positives = 63/73 (86%)
Frame = -3 / -3
Query: 1813 VVYRRKTSIFKRKERRL*NILSYASCCNF*CQGCPFLDIASSSTEEQLWRMISVST*RIY 1634
VVYRRK + ++RRL*N+L YA CC+F*CQGCPFLDIA SSTEEQLWRMISVST* IY
Sbjct: 267 VVYRRKHQFSRERKRRL*NVLFYAFCCHF*CQGCPFLDIARSSTEEQLWRMISVST*CIY 88
Query: 1633 VSNSA*FCPRISE 1595
VSNSA*F P+ISE
Sbjct: 87 VSNSA*FFPQISE 49
Score = 105 bits (223), Expect(5) = 9e-037
Identities = 46/59 (77%), Positives = 54/59 (91%)
Frame = +3 / +2
Query: 1578 KQKLVFSEIRGQNYAELLT*IR*VDTEIILHSCSSVEELAISRKGQPWH*KLQQDA*ES 1754
+ + ++SEI G+NYAELLT*I *VDTEIILHSCSSVE+LAISRKGQPWH*K QQ+A*+S
Sbjct: 32 RSRNLYSEICGKNYAELLT*IH*VDTEIILHSCSSVEDLAISRKGQPWH*KWQQNA*KS 208
Score = 69.8 bits (146), Expect(4) = 3e-053
Identities = 30/50 (60%), Positives = 32/50 (64%)
Frame = +3 / +1
Query: 1842 LSGGN*INIDSHRQKCMCR*LSTCK*PQTFNCCHACPCKLIIACCIFHFF 1991
LSGGN*INIDSH Q CMCR*LS CK PQTF ++ FHFF
Sbjct: 301 LSGGN*INIDSHGQNCMCR*LSPCKQPQTFQLLPCTSMQINYCMLYFHFF 450
Score = 66.1 bits (138), Expect(5) = 2e-063
Identities = 25/29 (86%), Positives = 25/29 (86%)
Frame = -3 / -1
Query: 1930 KVWGYLHVESYRHMHFCLWLSIFI*FPPE 1844
KVWG LH ESYRHM FC WLSIFI*FPPE
Sbjct: 389 KVWGCLHGESYRHMQFCPWLSIFI*FPPE 303
Score = 62.9 bits (131), Expect(4) = 6e-057
Identities = 24/32 (75%), Positives = 26/32 (81%)
Frame = -1 / -2
Query: 1929 KFGATCTLRATDTCIFAYGYLYLFNFHQREQK 1834
KFGA C +RATDTC FA+G LYLFNFHQR K
Sbjct: 388 KFGAACMVRATDTCNFAHGCLYLFNFHQRVNK 293
Score = 61.1 bits (127), Expect(4) = 9e-053
Identities = 26/31 (83%), Positives = 29/31 (93%)
Frame = -2 / -3
Query: 1934 VESLGLLAR*ELPTHAFLPMAIYIYLISTRE 1842
++SLGLLA *ELPTHA LPMA+YIYLISTRE
Sbjct: 393 LKSLGLLAW*ELPTHAILPMAVYIYLISTRE 301
Score = 60.6 bits (126), Expect(5) = 7e-067
Identities = 23/30 (76%), Positives = 26/30 (86%)
Frame = +2 / +3
Query: 1841 SLWWKLNKYR*P*AKMHVSVALNVQVAPNF 1930
+LWWKLNKYR P AK+HVSVAL +Q APNF
Sbjct: 300 TLWWKLNKYRQPWAKLHVSVALTMQAAPNF 389
Score = 54.2 bits (112), Expect(5) = 7e-067
Identities = 19/24 (79%), Positives = 20/24 (83%)
Frame = +3 / +2
Query: 1920 PQTFNCCHACPCKLIIACCIFHFF 1991
P+ FNCCHA PCKLIIACCIF F
Sbjct: 380 PKLFNCCHARPCKLIIACCIFISF 451
Score = 51.0 bits (105), Expect(5) = 2e-063
Identities = 19/24 (79%), Positives = 20/24 (83%)
Frame = -2 / -2
Query: 1991 KEMKNTTCNN*FAWTCMAAVESLG 1920
K +NTTCNN*FAWTCMAAVE G
Sbjct: 451 KRNENTTCNN*FAWTCMAAVEKFG 380
Score = 49.2 bits (101), Expect(5) = 9e-037
Identities = 18/20 (90%), Positives = 18/20 (90%)
Frame = +2 / +1
Query: 1928 FQLLPCMSMQINYCMLYFSF 1987
FQLLPC SMQINYCMLYF F
Sbjct: 388 FQLLPCTSMQINYCMLYFHF 447
Score = 48.3 bits (99), Expect(4) = 6e-057
Identities = 20/26 (76%), Positives = 21/26 (80%)
Frame = -3 / -3
Query: 1990 KK*KIQHAIINLHGHAWQQLKVWGYL 1913
K+ KIQHAIINLHG AWQQLK G L
Sbjct: 450 KEMKIQHAIINLHGRAWQQLKSLGLL 373
Score = 45.1 bits (92), Expect = 0.004
Identities = 18/22 (81%), Positives = 20/22 (90%)
Frame = +1 / +3
Query: 1915 SSPKLSTAAMHVHAN*LLHVVF 1980
++P STAAMHVHAN*LLHVVF
Sbjct: 375 AAPNFSTAAMHVHAN*LLHVVF 440
Score = 43.7 bits (89), Expect(5) = 7e-067
Identities = 15/20 (75%), Positives = 19/20 (95%)
Frame = +3 / +1
Query: 1545 CSTTWNRADQKKQKLVFSEI 1604
CST+WNRADQ+KQKLVF ++
Sbjct: 1 CSTSWNRADQQKQKLVFRDL 60
Score = 42.3 bits (86), Expect(4) = 9e-053
Identities = 17/18 (94%), Positives = 18/18 (100%)
Frame = -1 / -1
Query: 1980 KYNMQ*LICMDMHGSS*K 1927
KYNMQ*LICMD+HGSS*K
Sbjct: 440 KYNMQ*LICMDVHGSS*K 387
Score = 40.9 bits (83), Expect = 0.067
Identities = 23/53 (43%), Positives = 26/53 (49%)
Frame = +1 / +2
Query: 1834 FLFSLVEXXXXXXXXGKNACVGSSQRASSPKLSTAAMHVHAN*LLHVVFFISF 1992
F+ SLVE GK ACVGSS ASSPKL ++ FISF
Sbjct: 293 FVHSLVEIK*I*TAMGKIACVGSSHHASSPKLFNCCHARPCKLIIACCIFISF 451
Score = 34.5 bits (69), Expect(5) = 2e-063
Identities = 15/18 (83%), Positives = 15/18 (83%)
Frame = -3 / -1
Query: 1600 SENTSFCFF*SALFHVVE 1547
S NTSFCF *SALFH VE
Sbjct: 56 SLNTSFCFC*SALFHEVE 3
Score = 34.1 bits (68), Expect(4) = 3e-053
Identities = 13/16 (81%), Positives = 13/16 (81%)
Frame = +1 / +2
Query: 1546 VPPHGTEQIRRSRNSY 1593
VPPHGTE I RSRN Y
Sbjct: 2 VPPHGTELISRSRNLY 49
Score = 33.1 bits (66), Expect(5) = 7e-067
Identities = 12/13 (92%), Positives = 13/13 (100%)
Frame = +1 / +3
Query: 1810 RLNFCIFEFLFSL 1848
RLNFCIFEFLF+L
Sbjct: 267 RLNFCIFEFLFTL 305
Score = 31.8 bits (63), Expect(4) = 6e-057
Identities = 13/19 (68%), Positives = 16/19 (84%)
Frame = -1 / -2
Query: 1602 SLKIRVSASSDLLCSMWWN 1546
+L I+VSAS+D LCSM WN
Sbjct: 58 NL*IQVSASADQLCSMRWN 2
Score = 31.3 bits (62), Expect(4) = 9e-053
Identities = 13/17 (76%), Positives = 15/17 (88%)
Frame = -2 / -3
Query: 1595 KYEFLLLLICSVPCGGT 1545
+Y+FLLLLI SVP GGT
Sbjct: 51 EYKFLLLLISSVP*GGT 1
Score = 28.1 bits (55), Expect(4) = 3e-053
Identities = 11/12 (91%), Positives = 11/12 (91%)
Frame = +2 / +1
Query: 1811 D*TFAYLSFCSL 1846
D TFAYLSFCSL
Sbjct: 268 DSTFAYLSFCSL 303
Score = 26.3 bits (51), Expect(5) = 2e-063
Identities = 10/13 (76%), Positives = 12/13 (92%)
Frame = -1 / -1
Query: 1848 QREQKLKYAKVQS 1810
+ EQKLKYAKV+S
Sbjct: 305 ESEQKLKYAKVES 267
Score = 26.3 bits (51), Expect(5) = 9e-037
Identities = 13/18 (72%), Positives = 13/18 (72%)
Frame = +2 / +3
Query: 1547 FHHMEQSRSEEAETRIFR 1600
FH MEQS S EAET I R
Sbjct: 3 FHLMEQS*SAEAETCIQR 56
Score = 25.4 bits (49), Expect(5) = 9e-037
Identities = 12/16 (75%), Positives = 13/16 (81%)
Frame = +3 / +2
Query: 1800 LLYTTELLHI*VFVLS 1847
L TT+LLHI*VFV S
Sbjct: 257 LYTTTQLLHI*VFVHS 304
Score = 23.5 bits (45), Expect(5) = 9e-037
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +2 / +2
Query: 1772 FLSLEN*CF 1798
FLSLEN*CF
Sbjct: 227 FLSLEN*CF 253
>gb|CD213280.1|CD213280 HS1_29_B09.g1_A012 Heat-shocked seedlings Sorghum bicolor cDNA
clone HS1_29_B09_A012 5', mRNA sequence
Length = 580
Score = 256 bits (553), Expect = 1e-066
Identities = 98/116 (84%), Positives = 106/116 (91%)
Frame = +3 / +2
Query: 204 TCKLCEFGWSSQVLHCVEMGRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPK 383
+C+LC S+ V + MGRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWS+VPK
Sbjct: 233 SCELCRLQSSASVSALLSMGRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSTVPK 412
Query: 384 LAGLQRCGKSCRLRWINYLRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPG 551
LAGLQRCGKSCRLRWINYLRPDLKRGAF+Q+EEDLIIELHAVLGNRWSQIA +LPG
Sbjct: 413 LAGLQRCGKSCRLRWINYLRPDLKRGAFSQEEEDLIIELHAVLGNRWSQIATRLPG 580
Score = 142 bits (304), Expect = 2e-032
Identities = 56/93 (60%), Positives = 71/93 (76%)
Frame = -2 / -1
Query: 536 CNLRPPVPEDSVQLDDEVFFVLGECPSLEVWPQIVYPPQPTTLSAPLKPSEFGNRAPAAM 357
CNLRPPV + S++ +D+VFF+L EC S +V PQ++YPPQP L+ PLKP + + APAAM
Sbjct: 565 CNLRPPVSQYSMKFNDKVFFLLRECTSFKVRPQVIYPPQPAALATPLKPCKLRDSAPAAM 386
Query: 356 AMLCYVIHEFLILLRGPEPLSQLLLVAARMPPH 258
+L YV+HE LI LR PEPL QLLLV A +PPH
Sbjct: 385 PVLGYVVHELLIFLRRPEPLPQLLLVTAGVPPH 287
Score = 129 bits (276), Expect = 2e-028
Identities = 62/104 (59%), Positives = 64/104 (61%)
Frame = -3 / -2
Query: 550 PGSCAAI*DHLFPRTACXXXXXXXXSWANAPLLRSGLR*FIHLSLQLFPHL*SPASLGTE 371
PG+ AI*DHLFP TA S NAPLLRSGLR*FIHLSLQL PHL*SPAS GT
Sbjct: 579 PGNLVAI*DHLFPSTA*SSMIRSSSS*ENAPLLRSGLR*FIHLSLQLLPHL*SPASFGTV 400
Query: 370 LQQPWPCFVMXXXXXXXXXXXXXXXXXFCL*QQECLPISTQCRT 239
LQQP PC VM FCL*QQECLPI + T
Sbjct: 399 LQQPCPCLVMWFMSFSSSSGDQSPFLSFCL*QQECLPIESNAET 268
Score = 85.4 bits (180), Expect = 3e-015
Identities = 41/62 (66%), Positives = 47/62 (75%)
Frame = +2 / +1
Query: 257 DGEAFLLLQAEAEKGALVP*GG*ETHESHNKAWPWLLELCSQTRWASKVRKEL*AEVDKL 436
+GEA LLLQAEAE+GALV *G *E HE HN+A WLLE C + AS+V +EL AEVDKL
Sbjct: 286 NGEALLLLQAEAEEGALVS*GR*EAHEPHNQARAWLLEHCPEACRASEVWQELQAEVDKL 465
Query: 437 SE 442
E
Sbjct: 466 PE 471
Score = 85.4 bits (180), Expect = 3e-015
Identities = 44/77 (57%), Positives = 51/77 (66%)
Frame = +1 / +3
Query: 238 RFCIALRWGGILAATSRS*ERGSGPLRRMRNS*IT*QSMAMAAGALFPNSLGFKGAERVV 417
+F +WGG A TSRS* RGSG LR+MR+S* T* S MAAGAL + GF+G R
Sbjct: 267 QFQHCFQWGGTPAVTSRS*GRGSGLLRKMRSS*TT*PSTGMAAGALSRSLQGFRGVARAA 446
Query: 418 G*GG*TI*GQTSREGHS 468
G*GG* *G T +E HS
Sbjct: 447 G*GG*IT*GLTLKEVHS 497
Score = 83.1 bits (175), Expect = 1e-014
Identities = 42/69 (60%), Positives = 48/69 (69%)
Frame = -1 / -3
Query: 465 MPLS*GLASDSLSTSAYNSFRTFEAQRVWEQSSSSHGHALLCDS*VSHPPQGTRAPFSAS 286
M L *G AS +LSTSA +S T EA + Q SSSH A LC S* SH PQ TRAP SAS
Sbjct: 494 MHLF*GQASGNLSTSACSSCHTSEALQASGQCSSSHARAWLCGS*ASHLPQETRAPSSAS 315
Query: 285 ACSSKNASP 259
AC+S++ASP
Sbjct: 314 ACNSRSASP 288
>gb|AW563989.1|AW563989 LG1_281_D10.b1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 523
Score = 245 bits (529), Expect = 2e-063
Identities = 95/129 (73%), Positives = 109/129 (84%)
Frame = +3 / +3
Query: 324 EKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRGAFAQDEEDLIIELH 503
+KL+NHI K+GHGCWSSVPKLAGL+RCGKSCRLRWINYLRPDLKRGAF+Q+EEDLII LH
Sbjct: 9 DKLINHIAKYGHGCWSSVPKLAGLERCGKSCRLRWINYLRPDLKRGAFSQEEEDLIIHLH 188
Query: 504 AVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPNTHKPLTEADHGGAAPTIS 683
+++GN+WSQIA QLPGRTDNE+KN WNS IKKKLRQ+GIDP THKPL A A
Sbjct: 189 SMMGNKWSQIATQLPGRTDNEVKNFWNSYIKKKLRQRGIDPATHKPLPLAADASRAAAAG 368
Query: 684 TERTSGSSD 710
+ RT+ SD
Sbjct: 369 SSRTAVFSD 395
Score = 123 bits (264), Expect = 7e-027
Identities = 58/120 (48%), Positives = 73/120 (60%)
Frame = -2 / -3
Query: 683 ADGGSCTAVISLSKWLVGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDS 504
A GG V + LV ++ LP+LLLD RVP +LDL++ PP QLRCNLRP V
Sbjct: 368 ARGGGPAGVGGQRERLVRGRVDPALPELLLDVRVPEVLDLVVRPPRQLRCNLRPLVAHHG 189
Query: 503 VQLDDEVFFVLGECPSLEVWPQIVYPPQPTTLSAPLKPSEFGNRAPAAMAMLCYVIHEFL 324
+++DDEV L EC LEV PQ+V PPQP L PL G+ PAAMA+L V+ E +
Sbjct: 188 MEMDDEVLLFLRECSPLEVRPQVVDPPQPAALPTPL*TC*LGDGTPAAMAILGNVVDELV 9
Score = 85.4 bits (180), Expect(2) = 4e-033
Identities = 36/42 (85%), Positives = 36/42 (85%)
Frame = -3 / -1
Query: 466 NAPLLRSGLR*FIHLSLQLFPHL*SPASLGTELQQPWPCFVM 341
NAPLLRSGLR* IHLSLQLFPHL PASLGTELQQPWP M
Sbjct: 151 NAPLLRSGLR*LIHLSLQLFPHLSRPASLGTELQQPWPYLAM 26
Score = 79.0 bits (166), Expect(2) = 4e-033
Identities = 34/48 (70%), Positives = 38/48 (79%)
Frame = -3 / -1
Query: 655 SASVSGLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFP 512
+AS SGL V GS+P C SFFLM+EF +FL SLSV PGSC AI*DHL P
Sbjct: 340 AASGSGLCVAGSIPRCRSFFLMYEFQKFLTSLSVRPGSCVAI*DHLLP 197
Score = 47.3 bits (97), Expect(2) = 9e-012
Identities = 24/42 (57%), Positives = 28/42 (66%)
Frame = +2 / +2
Query: 515 EQVVSNCSAAARED***DQESMELVHQEEAEAERH*SQHPQA 640
+QVVS+C+AAA D QE +ELVHQEEA A R H QA
Sbjct: 200 QQVVSDCNAAAGADGQRGQELLELVHQEEAPAARDRPGHAQA 325
Score = 45.1 bits (92), Expect(2) = 9e-012
Identities = 18/39 (46%), Positives = 25/39 (64%)
Frame = +2 / +2
Query: 326 ETHESHNKAWPWLLELCSQTRWASKVRKEL*AEVDKLSE 442
+ H+ H + WPWLLE Q + +V +EL AEVD+L E
Sbjct: 11 QAHQPHCQVWPWLLEFRPQASRSREVWEELQAEVDQLPE 127
Score = 40.9 bits (83), Expect(2) = 2e-008
Identities = 25/50 (50%), Positives = 29/50 (58%)
Frame = +1 / +1
Query: 319 RMRNS*IT*QSMAMAAGALFPNSLGFKGAERVVG*GG*TI*GQTSREGHS 468
R +S T SMAMAAG P+ +G R G*GG T *G+TSR HS
Sbjct: 4 RGTSSSTTLPSMAMAAGVPSPS*QV*RGVGRAAG*GGSTT*GRTSRGEHS 153
Score = 40.5 bits (82), Expect(2) = 2e-008
Identities = 25/59 (42%), Positives = 27/59 (45%)
Frame = +1 / +1
Query: 535 QRSCQGGLIMRSRIYGTRASRRS*GRKALIPTPTSHLLRLITAVQLPPSAPREPQGPAT 711
QRSC+GG RSR GTR SRRS G TS T PP A + AT
Sbjct: 220 QRSCRGGRTTRSRTSGTRTSRRSSGSAGSTRPRTSRSRWPPTPAGPPPRAAAARRCSAT 396
Score = 38.2 bits (77), Expect(2) = 0.016
Identities = 20/39 (51%), Positives = 23/39 (58%)
Frame = -1 / -2
Query: 456 S*GLASDSLSTSAYNSFRTFEAQRVWEQSSSSHGHALLC 340
S*G AS S STSA +S T W ++SSSHGH C
Sbjct: 141 S*GPASGS*STSACSSSHTSLDLLAWGRNSSSHGHTWQC 25
Score = 22.6 bits (43), Expect(2) = 0.016
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = -1 / -2
Query: 546 AAALQFETTC 517
AAALQ ETTC
Sbjct: 231 AAALQSETTC 202
>gb|CW454158.1|CW454158 fsbb001f198h17k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f198h17, DNA
sequence
Length = 617
Score = 133 bits (284), Expect(4) = 3e-063
Identities = 53/61 (86%), Positives = 55/61 (90%)
Frame = +3 / +1
Query: 516 NRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPNTHKPLTEADHGGAAPTISTERT 695
NRWSQIA +LPGRTDNEIKNLWNS IKKKLRQKGIDPNTHKPL E +H AAPTISTERT
Sbjct: 376 NRWSQIATRLPGRTDNEIKNLWNSSIKKKLRQKGIDPNTHKPLAEVEHSKAAPTISTERT 555
Query: 696 S 698
S
Sbjct: 556 S 558
Score = 110 bits (235), Expect(4) = 3e-063
Identities = 43/46 (93%), Positives = 46/46 (100%)
Frame = +3 / +2
Query: 384 LAGLQRCGKSCRLRWINYLRPDLKRGAFAQDEEDLIIELHAVLGNR 521
+AGLQRCGKSCRLRWINYLRPDLKRGAF+Q+EEDLIIELHAVLGNR
Sbjct: 152 MAGLQRCGKSCRLRWINYLRPDLKRGAFSQEEEDLIIELHAVLGNR 289
Score = 105 bits (223), Expect(2) = 2e-035
Identities = 48/61 (78%), Positives = 50/61 (81%)
Frame = -3 / -1
Query: 697 EVLSVLMVGAAPP*SASVSGLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHL 518
EVLSVL+VGAA S S GLWVLGSMPFC SFFLM EF RFLISLSVLPG+ AI*DHL
Sbjct: 557 EVLSVLIVGAALLCSTSARGLWVLGSMPFCRSFFLMLEFQRFLISLSVLPGNLVAI*DHL 378
Query: 517 F 515
F
Sbjct: 377 F 375
Score = 82.2 bits (173), Expect(2) = 2e-028
Identities = 38/60 (63%), Positives = 44/60 (73%)
Frame = -2 / -3
Query: 695 GSLGADGGSCTAVISLSKWLVGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPV 516
GSL D C AV +L K LVGVG++AFLP+LLLDA VP IL+L+IS Q CNLRPPV
Sbjct: 555 GSLSTDCWRCFAVFNLGKGLVGVGVDAFLPELLLDA*VPEILNLVISSSRQPCCNLRPPV 376
Score = 67.0 bits (140), Expect(2) = 2e-035
Identities = 24/44 (54%), Positives = 34/44 (77%)
Frame = -2 / -2
Query: 521 PVPEDSVQLDDEVFFVLGECPSLEVWPQIVYPPQPTTLSAPLKP 390
PV + S++ +D+VFF+L EC S +V PQ++YPPQP L+ PLKP
Sbjct: 289 PVSQYSMKFNDKVFFLLRECTSFKVRPQVIYPPQPAALATPLKP 158
Score = 66.6 bits (139), Expect(2) = 2e-028
Identities = 32/46 (69%), Positives = 33/46 (71%)
Frame = -3 / -3
Query: 523 HLFPRTACXXXXXXXXSWANAPLLRSGLR*FIHLSLQLFPHL*SPA 386
+LFP TA S NAPLLRSGLR*FIHLSLQL PHL*SPA
Sbjct: 291 YLFPSTA*SSMIRSSSS*ENAPLLRSGLR*FIHLSLQLLPHL*SPA 154
Score = 63.4 bits (132), Expect(2) = 6e-012
Identities = 33/54 (61%), Positives = 35/54 (64%)
Frame = +1 / +2
Query: 535 QRSCQGGLIMRSRIYGTRASRRS*GRKALIPTPTSHLLRLITAVQLPPSAPREP 696
Q+ C LI R RI GT+ASRRS GRKA PTPTS L RL TA Q S REP
Sbjct: 395 QQGCLEELITRLRISGTQASRRSSGRKASTPTPTSPLPRLNTAKQRQQSVLREP 556
Score = 60.2 bits (125), Expect(2) = 1e-008
Identities = 28/42 (66%), Positives = 33/42 (78%)
Frame = +2 / +3
Query: 515 EQVVSNCSAAARED***DQESMELVHQEEAEAERH*SQHPQA 640
EQVVS+C+ A ++** D ES+EL HQEEA AERH QHPQA
Sbjct: 375 EQVVSDCNKVAWKN**RD*ESLELKHQEEAPAERHRPQHPQA 500
Score = 33.1 bits (66), Expect(2) = 6e-012
Identities = 15/26 (57%), Positives = 17/26 (65%)
Frame = +1 / +3
Query: 391 GFKGAERVVG*GG*TI*GQTSREGHS 468
GF+G R G*GG* *G T +E HS
Sbjct: 159 GFRGVARAAG*GG*IT*GLTLKEVHS 236
Score = 31.3 bits (62), Expect(4) = 3e-063
Identities = 13/18 (72%), Positives = 15/18 (83%)
Frame = +3 / +2
Query: 702 SSDINPSSTGPLGNLSPL 755
SSD++PSS G LGNLS L
Sbjct: 563 SSDVDPSSGGALGNLSHL 616
Score = 27.2 bits (53), Expect(4) = 3e-063
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = +3 / +3
Query: 360 GCWSSVPKLAG 392
GCWS+V KLAG
Sbjct: 3 GCWSTVSKLAG 35
Score = 24.9 bits (48), Expect(2) = 1e-008
Identities = 12/17 (70%), Positives = 14/17 (82%)
Frame = +2 / +1
Query: 392 ASKVRKEL*AEVDKLSE 442
AS+V +EL AEVDKL E
Sbjct: 160 ASEVWQELQAEVDKLPE 210
>gb|CD462462.1|CD462462 ETH1_37_D07.g1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_37_D07_A002 5', mRNA sequence
Length = 652
Score = 128 bits (275), Expect(3) = 6e-063
Identities = 53/88 (60%), Positives = 65/88 (73%)
Frame = +3 / +2
Query: 867 QLTAGHESPSTCHSSGQTLYFPFQQPLGYNSESGSSDGANMNSLWFNQSDFNCSTISTVM 1046
QL +GHE+ ++C S+G FPFQQ + YN+E G +G + NS WFNQ++ + STISTVM
Sbjct: 20 QLVSGHENLTSCRSTGPIPNFPFQQLMCYNNEFGHKNGGSNNSFWFNQNESSGSTISTVM 199
Query: 1047 PPVSPSALSTSMGLNLPPDNPRHGGTGI 1130
PPVSPS LSTS GLN PDNP GGTGI
Sbjct: 200 PPVSPSTLSTSTGLNGSPDNPHSGGTGI 283
Score = 83.1 bits (175), Expect(4) = 2e-038
Identities = 34/48 (70%), Positives = 38/48 (79%)
Frame = -3 / -2
Query: 1129 MPVPPCRGLSGGRFSPIDVERADGETGGITVEIVLQLKSLWLNQSEFI 986
MPVPP GLSG SP+DVER DGETGGITVE+VL L S WLNQ+E +
Sbjct: 282 MPVPPECGLSGDPLSPVDVERVDGETGGITVEMVLPLDSFWLNQNELL 139
Score = 81.7 bits (172), Expect(3) = 6e-063
Identities = 31/68 (45%), Positives = 40/68 (58%)
Frame = +3 / +2
Query: 1152 FYWDGTNPXXXXXXXXXXXXXXXFEPQSTSTILENSVFPWTDIGQEKDTRAHLVAELKWP 1331
FYW+ NP FE QSTS++LE+SVFPWTD+ +K+++ HL ELKWP
Sbjct: 296 FYWETANPSSSSSRGSSGSNSLGFERQSTSSLLESSVFPWTDLTPDKNSQVHLEEELKWP 475
Query: 1332 DSFAETTT 1355
D T T
Sbjct: 476 DLLHGTFT 499
Score = 78.0 bits (164), Expect(3) = 3e-032
Identities = 41/91 (45%), Positives = 53/91 (58%)
Frame = +1 / +3
Query: 865 SSLLLDTRVHQPATHQAKLSISLSNSP*ATTVRVAAAMGRI*IHSGSTRVTSTAAQFLQ* 1044
+SL L + A QA+ ISLS+S ATT+ +A M + IHSG TR++ AA F *
Sbjct: 18 TSLFLVMKTSLAAAQQAQFQISLSSS*CATTMNLATRMVVVTIHSGLTRMSQVAAPFPP* 197
Query: 1045 CRQFHHRPSLHQWG*IFHLIILDMEELALEV 1137
C QFHH+ S HQ G + H II E LA +
Sbjct: 198 CHQFHHQLSQHQQGSMGHQIIHTREALAFRI 290
Score = 72.5 bits (152), Expect(3) = 6e-063
Identities = 29/54 (53%), Positives = 36/54 (66%)
Frame = +3 / +2
Query: 1335 SFAETTTVMQNQSQTLYDDVIKAESQFNIEGICASWFXXXXXXXXXXVAPDMYD 1496
+F +T MQN SQ+LY+DVIKAESQFNIEG+CA+W V D+YD
Sbjct: 491 TFTDTPATMQNLSQSLYEDVIKAESQFNIEGLCAAWSQNLQPQQHLQVVSDLYD 652
Score = 55.1 bits (114), Expect(4) = 2e-038
Identities = 27/48 (56%), Positives = 33/48 (68%)
Frame = -3 / -2
Query: 1360 MTVVVSAKESGHLSSATR*ALVSFSCPMSVHGKTLFSRIVLVLCGSNP 1217
++V V +SGHLSS++R* + S SVHGKTL SR LVLC SNP
Sbjct: 504 VSVNVPWSKSGHLSSSSR*TWLFLSGVKSVHGKTLLSRSELVLCRSNP 361
Score = 54.7 bits (113), Expect(4) = 2e-038
Identities = 28/51 (54%), Positives = 30/51 (58%)
Frame = -3 / -2
Query: 1495 SYMSGATXXXXXXX*FWNQEAHIPSMLNWLSALITSS*SVWLWFCMTVVVS 1343
SY S T F +Q A PSMLNWLSALITSS S WL FC+ VS
Sbjct: 651 SYKSDTTCRCCCGCRF*DQAAQRPSMLNWLSALITSSYSDWLRFCIVAGVS 499
Score = 52.8 bits (109), Expect(3) = 3e-032
Identities = 25/47 (53%), Positives = 29/47 (61%)
Frame = +1 / +3
Query: 1354 QSCRTRAKRFMMM*SRQRANST*KGYVLLGSRISSHSNSCR*HQTCM 1494
Q CR A M S+ RANST*+ V G +I SHSN CR*+Q CM
Sbjct: 510 QRCRILASHCTKMLSKPRANST*RASVQPGLKICSHSNICR*YQICM 650
Score = 51.9 bits (107), Expect(3) = 1e-018
Identities = 35/77 (45%), Positives = 40/77 (51%)
Frame = -2 / -1
Query: 1130 NASSSMSRIIRWKIQPH*CREGRW*NWRHHCRNCAAVEVTLVEPE*IHIRPIXXXXXXXX 951
NAS+S II I+P *C E W*NW HH N AA + LV+PE*I I
Sbjct: 283 NASASRVWIIW*PIEPC*C*ES*W*NWWHHGGNGAAT*LILVKPE*IVTTTILVAKFIVV 104
Query: 950 XXXXLEREIESLA**VA 900
LEREI + A * A
Sbjct: 103 AHQLLEREIWNWAC*AA 53
Score = 50.1 bits (103), Expect(4) = 2e-023
Identities = 22/47 (46%), Positives = 29/47 (61%)
Frame = +2 / +1
Query: 989 EFTLVQPE*LQLQHNFYSDAASFTIGPLYINGAEXXXXXXXXWRNWH 1129
+F LV PE*++ QH+F+ DA SFTI L IN A+ R+WH
Sbjct: 142 QFILV*PE*VKWQHHFHRDATSFTINSLNINRAQWVTR*STLGRHWH 282
Score = 48.7 bits (100), Expect(3) = 3e-032
Identities = 21/42 (50%), Positives = 27/42 (64%)
Frame = +1 / +3
Query: 1210 TVWDLNHRARAQFWRTVSSHGQTLDKKKIQGLT**RNLSGLT 1335
T WDL+ +A+A FW+ V SHGQ + KI T +N SGLT
Sbjct: 354 TAWDLSGKAQAHFWKVVFSHGQI*HQIKIAKFTLRKNSSGLT 479
Score = 45.5 bits (93), Expect(3) = 1e-018
Identities = 23/44 (52%), Positives = 26/44 (59%)
Frame = -1 / -3
Query: 1347 FRQRSQAT*VPLLGEPLYLFLVQCLSMGRHCSPELCSCSVVQIP 1216
F SQAT*V GE Y +LV LSMG+H PE+ C QIP
Sbjct: 491 FHGASQAT*VLPQGELGYFYLVLNLSMGKHYFPEVSLCFAAQIP 360
Score = 42.8 bits (87), Expect(4) = 2e-023
Identities = 21/45 (46%), Positives = 24/45 (53%)
Frame = +2 / +1
Query: 1361 AEPEPNAL**CDQGREPIQHRRDMCFLVPESXXXXXXXGSTRHV* 1495
AE P + C Q REPIQHR +C LV +S GS R V*
Sbjct: 517 AES*PVTVRRCYQSREPIQHRGPLCSLVSKSAATATSAGSIRFV* 651
Score = 42.8 bits (87), Expect(3) = 2e-011
Identities = 22/61 (36%), Positives = 27/61 (44%)
Frame = -2 / -1
Query: 1334 VRPLKFRY*VSPCIFFLSNVCPWEDTVLQNCARALWFKSHTVXXXXXXXXXXXXXXXXPV 1155
VRPL+F V+ IF +CPWE+T Q A AL KS V P+
Sbjct: 478 VRPLEFFLKVNLAIFIWC*ICPWENTTFQK*ACALPLKSQAVASAASSTAAAARISSFPI 299
Query: 1154 E 1152
E
Sbjct: 298 E 296
Score = 42.3 bits (86), Expect(4) = 2e-023
Identities = 23/48 (47%), Positives = 27/48 (56%)
Frame = +2 / +1
Query: 1217 GI*TTEHEHNSGEQCLPMDRHWTRKRYKGSPSSGT*VA*LLCRNDHSH 1360
GI* +H+ SG+ C PMDR TR + SP T VA*L N H H
Sbjct: 361 GI*AAKHKLTSGK*CFPMDRFNTR*K*PSSP*GRTQVA*LAPWNIHGH 504
Score = 35.4 bits (71), Expect(3) = 1e-018
Identities = 19/48 (39%), Positives = 24/48 (50%)
Frame = -2 / -1
Query: 1496 VIHVWCYXXXXXXXXXLEPRSTYPFYVELALCLDHIIIKRLALVLHDC 1353
VI + Y L P T YVELAL D+I ++ LA +LH C
Sbjct: 652 VIQI*YYLQMLLWLQILRPGCTEALYVELALGFDNIFVQ*LAKILHRC 509
Score = 33.1 bits (66), Expect(3) = 2e-011
Identities = 21/53 (39%), Positives = 25/53 (47%)
Frame = -1 / -3
Query: 1149 NLLRYFQCQFLHVEDYQVEDSAPLM*RGPMVXXXXXXXXXXXXXSHSG*TRVN 991
N + Y +CQ L DY V A LM R MV +HSG*TR+N
Sbjct: 302 NRIGYSECQCLPSVDYLVTH*ALLMLRELMVKLVASRWKWCCHLTHSG*TRMN 144
Score = 32.7 bits (65), Expect(3) = 2e-011
Identities = 20/45 (44%), Positives = 22/45 (48%)
Frame = -1 / -3
Query: 1494 HTCLVLPXXXXXXADSGTKKHISLLC*IGSLP*SHHHKAFGSGSA 1360
HT L+LP AD T+ H LC*IGS * H G SA
Sbjct: 650 HTNLILPADVAVAADFETRLHRGPLC*IGSRL**HLRTVTG*DSA 516
Score = 31.8 bits (63), Expect(4) = 2e-023
Identities = 13/22 (59%), Positives = 15/22 (68%)
Frame = +2 / +1
Query: 878 WTRESINLPLIRPNSLFPFPTA 943
W+ + LPL RPNS FPFP A
Sbjct: 31 WS*KPH*LPLNRPNSKFPFPAA 96
Score = 24.9 bits (48), Expect(4) = 2e-038
Identities = 11/24 (45%), Positives = 13/24 (54%)
Frame = -3 / -2
Query: 940 CWKGK*RVWPDEWQVDGLSCPAVS 869
CWKGK + P E Q+ S P S
Sbjct: 93 CWKGKFGIGPVERQLVRFS*PETS 22
>gb|CW119828.1|CW119828 104_497_11108982_116_34641_031 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11108982, DNA
sequence
Length = 635
Score = 126 bits (270), Expect(3) = 6e-063
Identities = 52/87 (59%), Positives = 64/87 (73%)
Frame = +3 / +2
Query: 870 LTAGHESPSTCHSSGQTLYFPFQQPLGYNSESGSSDGANMNSLWFNQSDFNCSTISTVMP 1049
L +GHE+ ++C S+G FPFQQ + YN+E G +G + NS WFNQ++ + STISTVMP
Sbjct: 2 LVSGHENLTSCRSTGPIPNFPFQQLMCYNNEFGHKNGGSNNSFWFNQNESSGSTISTVMP 181
Query: 1050 PVSPSALSTSMGLNLPPDNPRHGGTGI 1130
PVSPS LSTS GLN PDNP GGTGI
Sbjct: 182 PVSPSTLSTSTGLNGSPDNPHSGGTGI 262
Score = 83.1 bits (175), Expect(4) = 7e-039
Identities = 34/48 (70%), Positives = 38/48 (79%)
Frame = -3 / -3
Query: 1129 MPVPPCRGLSGGRFSPIDVERADGETGGITVEIVLQLKSLWLNQSEFI 986
MPVPP GLSG SP+DVER DGETGGITVE+VL L S WLNQ+E +
Sbjct: 261 MPVPPECGLSGDPLSPVDVERVDGETGGITVEMVLPLDSFWLNQNELL 118
Score = 81.7 bits (172), Expect(3) = 6e-063
Identities = 31/68 (45%), Positives = 40/68 (58%)
Frame = +3 / +2
Query: 1152 FYWDGTNPXXXXXXXXXXXXXXXFEPQSTSTILENSVFPWTDIGQEKDTRAHLVAELKWP 1331
FYW+ NP FE QSTS++LE+SVFPWTD+ +K+++ HL ELKWP
Sbjct: 275 FYWETANPSSSSSRGSSGSNSLGFERQSTSSLLESSVFPWTDLTPDKNSQVHLEEELKWP 454
Query: 1332 DSFAETTT 1355
D T T
Sbjct: 455 DLLHGTFT 478
Score = 75.8 bits (159), Expect(3) = 6e-033
Identities = 40/89 (44%), Positives = 51/89 (57%)
Frame = +1 / +3
Query: 871 LLLDTRVHQPATHQAKLSISLSNSP*ATTVRVAAAMGRI*IHSGSTRVTSTAAQFLQ*CR 1050
L L + A QA+ ISLS+S ATT+ +A M + IHSG TR++ AA F *C
Sbjct: 3 LFLVMKTSLAAAQQAQFQISLSSS*CATTMNLATRMVVVTIHSGLTRMSQVAAPFPP*CH 182
Query: 1051 QFHHRPSLHQWG*IFHLIILDMEELALEV 1137
QFHH+ S HQ G + H II E LA +
Sbjct: 183 QFHHQLSQHQQGSMGHQIIHTREALAFRI 269
Score = 74.8 bits (157), Expect(3) = 6e-063
Identities = 30/55 (54%), Positives = 37/55 (67%)
Frame = +3 / +2
Query: 1335 SFAETTTVMQNQSQTLYDDVIKAESQFNIEGICASWFXXXXXXXXXXVAPDMYDK 1499
+F +T MQN SQ+LY+DVIKAESQFNIEG+CA+W V D+YDK
Sbjct: 470 TFTDTPATMQNLSQSLYEDVIKAESQFNIEGLCAAWSQNLQPQQHLQVVSDLYDK 634
Score = 57.4 bits (119), Expect(3) = 6e-033
Identities = 27/49 (55%), Positives = 31/49 (63%)
Frame = +1 / +3
Query: 1354 QSCRTRAKRFMMM*SRQRANST*KGYVLLGSRISSHSNSCR*HQTCMTR 1500
Q CR A M S+ RANST*+ V G +I SHSN CR*+Q CMTR
Sbjct: 489 QRCRILASHCTKMLSKPRANST*RASVQPGLKICSHSNICR*YQICMTR 635
Score = 56.5 bits (117), Expect(4) = 7e-039
Identities = 29/52 (55%), Positives = 31/52 (59%)
Frame = -3 / -3
Query: 1498 LSYMSGATXXXXXXX*FWNQEAHIPSMLNWLSALITSS*SVWLWFCMTVVVS 1343
LSY S T F +Q A PSMLNWLSALITSS S WL FC+ VS
Sbjct: 633 LSYKSDTTCRCCCGCRF*DQAAQRPSMLNWLSALITSSYSDWLRFCIVAGVS 478
Score = 55.1 bits (114), Expect(4) = 7e-039
Identities = 27/48 (56%), Positives = 33/48 (68%)
Frame = -3 / -3
Query: 1360 MTVVVSAKESGHLSSATR*ALVSFSCPMSVHGKTLFSRIVLVLCGSNP 1217
++V V +SGHLSS++R* + S SVHGKTL SR LVLC SNP
Sbjct: 483 VSVNVPWSKSGHLSSSSR*TWLFLSGVKSVHGKTLLSRSELVLCRSNP 340
Score = 51.9 bits (107), Expect(3) = 6e-020
Identities = 35/77 (45%), Positives = 40/77 (51%)
Frame = -2 / -2
Query: 1130 NASSSMSRIIRWKIQPH*CREGRW*NWRHHCRNCAAVEVTLVEPE*IHIRPIXXXXXXXX 951
NAS+S II I+P *C E W*NW HH N AA + LV+PE*I I
Sbjct: 262 NASASRVWIIW*PIEPC*C*ES*W*NWWHHGGNGAAT*LILVKPE*IVTTTILVAKFIVV 83
Query: 950 XXXXLEREIESLA**VA 900
LEREI + A * A
Sbjct: 82 AHQLLEREIWNWAC*AA 32
Score = 50.1 bits (103), Expect(4) = 3e-024
Identities = 22/47 (46%), Positives = 29/47 (61%)
Frame = +2 / +1
Query: 989 EFTLVQPE*LQLQHNFYSDAASFTIGPLYINGAEXXXXXXXXWRNWH 1129
+F LV PE*++ QH+F+ DA SFTI L IN A+ R+WH
Sbjct: 121 QFILV*PE*VKWQHHFHRDATSFTINSLNINRAQWVTR*STLGRHWH 261
Score = 48.7 bits (100), Expect(3) = 6e-033
Identities = 21/42 (50%), Positives = 27/42 (64%)
Frame = +1 / +3
Query: 1210 TVWDLNHRARAQFWRTVSSHGQTLDKKKIQGLT**RNLSGLT 1335
T WDL+ +A+A FW+ V SHGQ + KI T +N SGLT
Sbjct: 333 TAWDLSGKAQAHFWKVVFSHGQI*HQIKIAKFTLRKNSSGLT 458
Score = 45.5 bits (93), Expect(3) = 6e-020
Identities = 23/44 (52%), Positives = 26/44 (59%)
Frame = -1 / -1
Query: 1347 FRQRSQAT*VPLLGEPLYLFLVQCLSMGRHCSPELCSCSVVQIP 1216
F SQAT*V GE Y +LV LSMG+H PE+ C QIP
Sbjct: 470 FHGASQAT*VLPQGELGYFYLVLNLSMGKHYFPEVSLCFAAQIP 339
Score = 45.1 bits (92), Expect(4) = 3e-024
Identities = 22/46 (47%), Positives = 25/46 (54%)
Frame = +2 / +1
Query: 1361 AEPEPNAL**CDQGREPIQHRRDMCFLVPESXXXXXXXGSTRHV*Q 1498
AE P + C Q REPIQHR +C LV +S GS R V*Q
Sbjct: 496 AES*PVTVRRCYQSREPIQHRGPLCSLVSKSAATATSAGSIRFV*Q 633
Score = 42.8 bits (87), Expect(3) = 7e-013
Identities = 22/61 (36%), Positives = 27/61 (44%)
Frame = -2 / -2
Query: 1334 VRPLKFRY*VSPCIFFLSNVCPWEDTVLQNCARALWFKSHTVXXXXXXXXXXXXXXXXPV 1155
VRPL+F V+ IF +CPWE+T Q A AL KS V P+
Sbjct: 457 VRPLEFFLKVNLAIFIWC*ICPWENTTFQK*ACALPLKSQAVASAASSTAAAARISSFPI 278
Query: 1154 E 1152
E
Sbjct: 277 E 275
Score = 42.3 bits (86), Expect(4) = 3e-024
Identities = 23/48 (47%), Positives = 27/48 (56%)
Frame = +2 / +1
Query: 1217 GI*TTEHEHNSGEQCLPMDRHWTRKRYKGSPSSGT*VA*LLCRNDHSH 1360
GI* +H+ SG+ C PMDR TR + SP T VA*L N H H
Sbjct: 340 GI*AAKHKLTSGK*CFPMDRFNTR*K*PSSP*GRTQVA*LAPWNIHGH 483
Score = 40.0 bits (81), Expect(3) = 6e-020
Identities = 22/47 (46%), Positives = 24/47 (51%)
Frame = -1 / -1
Query: 1500 PCHTCLVLPXXXXXXADSGTKKHISLLC*IGSLP*SHHHKAFGSGSA 1360
PCHT L+LP AD T+ H LC*IGS * H G SA
Sbjct: 635 PCHTNLILPADVAVAADFETRLHRGPLC*IGSRL**HLRTVTG*DSA 495
Score = 37.3 bits (75), Expect(3) = 7e-013
Identities = 20/49 (40%), Positives = 25/49 (51%)
Frame = -2 / -2
Query: 1499 LVIHVWCYXXXXXXXXXLEPRSTYPFYVELALCLDHIIIKRLALVLHDC 1353
LVI + Y L P T YVELAL D+I ++ LA +LH C
Sbjct: 634 LVIQI*YYLQMLLWLQILRPGCTEALYVELALGFDNIFVQ*LAKILHRC 488
Score = 33.1 bits (66), Expect(3) = 7e-013
Identities = 21/53 (39%), Positives = 25/53 (47%)
Frame = -1 / -1
Query: 1149 NLLRYFQCQFLHVEDYQVEDSAPLM*RGPMVXXXXXXXXXXXXXSHSG*TRVN 991
N + Y +CQ L DY V A LM R MV +HSG*TR+N
Sbjct: 281 NRIGYSECQCLPSVDYLVTH*ALLMLRELMVKLVASRWKWCCHLTHSG*TRMN 123
Score = 31.8 bits (63), Expect(4) = 3e-024
Identities = 13/22 (59%), Positives = 15/22 (68%)
Frame = +2 / +1
Query: 878 WTRESINLPLIRPNSLFPFPTA 943
W+ + LPL RPNS FPFP A
Sbjct: 10 WS*KPH*LPLNRPNSKFPFPAA 75
Score = 24.9 bits (48), Expect(4) = 7e-039
Identities = 11/24 (45%), Positives = 13/24 (54%)
Frame = -3 / -3
Query: 940 CWKGK*RVWPDEWQVDGLSCPAVS 869
CWKGK + P E Q+ S P S
Sbjct: 72 CWKGKFGIGPVERQLVRFS*PETS 1
>gb|CX611203.1|CX611203 ANR1_23_E12.b1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_23_E12_A002 3', mRNA sequence
Length = 764
Score = 105 bits (225), Expect(4) = 1e-062
Identities = 46/83 (55%), Positives = 54/83 (65%)
Frame = +3 / +1
Query: 1335 SFAETTTVMQNQSQTLYDDVIKAESQFNIEGICASWFXXXXXXXXXXVAPDMYDKDLQRM 1514
+F +T MQN SQ+LY+DVIKAESQFNIEG+CA+W V D+YDKDLQRM
Sbjct: 376 TFTDTPATMQNLSQSLYEDVIKAESQFNIEGLCAAWSQNLQPQQHLQVVSDLYDKDLQRM 555
Query: 1515 QLSFENI*ALCSTTWNRADQKKQ 1583
LSFENI*A C QK +
Sbjct: 556 SLSFENI*ATCCMQGTEK*QKAE 624
Score = 90.4 bits (191), Expect(4) = 1e-062
Identities = 37/55 (67%), Positives = 42/55 (76%)
Frame = +3 / +1
Query: 966 GSSDGANMNSLWFNQSDFNCSTISTVMPPVSPSALSTSMGLNLPPDNPRHGGTGI 1130
G +G + NS WFNQ++ + STISTVMPPVSPS LSTS GLN PDNP GGTGI
Sbjct: 4 GHKNGGSNNSFWFNQNESSGSTISTVMPPVSPSTLSTSTGLNGSPDNPHSGGTGI 168
Score = 84.5 bits (178), Expect(3) = 5e-045
Identities = 42/70 (60%), Positives = 46/70 (65%)
Frame = -3 / -1
Query: 1552 VEHNA*IFSKDSCILCKSLSYMSGATXXXXXXX*FWNQEAHIPSMLNWLSALITSS*SVW 1373
++H A*IFSKD ILCKSLSY S T F +Q A PSMLNWLSALITSS S W
Sbjct: 593 MQHVA*IFSKDKDILCKSLSYKSDTTCRCCCGCRF*DQAAQRPSMLNWLSALITSSYSDW 414
Query: 1372 LWFCMTVVVS 1343
L FC+ VS
Sbjct: 413 LRFCIVAGVS 384
Score = 83.1 bits (175), Expect(3) = 5e-045
Identities = 34/48 (70%), Positives = 38/48 (79%)
Frame = -3 / -1
Query: 1129 MPVPPCRGLSGGRFSPIDVERADGETGGITVEIVLQLKSLWLNQSEFI 986
MPVPP GLSG SP+DVER DGETGGITVE+VL L S WLNQ+E +
Sbjct: 167 MPVPPECGLSGDPLSPVDVERVDGETGGITVEMVLPLDSFWLNQNELL 24
Score = 81.7 bits (172), Expect(4) = 1e-062
Identities = 31/68 (45%), Positives = 40/68 (58%)
Frame = +3 / +1
Query: 1152 FYWDGTNPXXXXXXXXXXXXXXXFEPQSTSTILENSVFPWTDIGQEKDTRAHLVAELKWP 1331
FYW+ NP FE QSTS++LE+SVFPWTD+ +K+++ HL ELKWP
Sbjct: 181 FYWETANPSSSSSRGSSGSNSLGFERQSTSSLLESSVFPWTDLTPDKNSQVHLEEELKWP 360
Query: 1332 DSFAETTT 1355
D T T
Sbjct: 361 DLLHGTFT 384
Score = 81.3 bits (171), Expect(3) = 5e-034
Identities = 37/65 (56%), Positives = 43/65 (66%)
Frame = +1 / +2
Query: 1354 QSCRTRAKRFMMM*SRQRANST*KGYVLLGSRISSHSNSCR*HQTCMTRTCKECNYLLRI 1533
Q CR A M S+ RANST*+ V G +I SHSN CR*+Q CMTR C+EC LLRI
Sbjct: 395 QRCRILASHCTKMLSKPRANST*RASVQPGLKICSHSNICR*YQICMTRICRECPCLLRI 574
Query: 1534 SRHYV 1548
SR +V
Sbjct: 575 SRQHV 589
Score = 71.6 bits (150), Expect(3) = 1e-027
Identities = 33/64 (51%), Positives = 38/64 (59%)
Frame = +2 / +3
Query: 1361 AEPEPNAL**CDQGREPIQHRRDMCFLVPESXXXXXXXGSTRHV*QGLAKNATIF*EYLG 1540
AE P + C Q REPIQHR +C LV +S GS R V*QG A+N +F*EYLG
Sbjct: 402 AES*PVTVRRCYQSREPIQHRGPLCSLVSKSAATATSAGSIRFV*QGFAENVLVF*EYLG 581
Query: 1541 IMFH 1552
M H
Sbjct: 582 NMLH 593
Score = 62.0 bits (129), Expect(3) = 2e-025
Identities = 32/65 (49%), Positives = 38/65 (58%)
Frame = -2 / -3
Query: 1547 T*CLDILKR*LHSLQVLVIHVWCYXXXXXXXXXLEPRSTYPFYVELALCLDHIIIKRLAL 1368
T CLDILKR HSLQ+LVI + Y L P T YVELAL D+I ++ LA
Sbjct: 588 TCCLDILKRQGHSLQILVIQI*YYLQMLLWLQILRPGCTEALYVELALGFDNIFVQ*LAK 409
Query: 1367 VLHDC 1353
+LH C
Sbjct: 408 ILHRC 394
Score = 61.6 bits (128), Expect(3) = 6e-020
Identities = 31/63 (49%), Positives = 36/63 (57%)
Frame = -1 / -2
Query: 1548 NIMPRYSQKIVAFFASPCHTCLVLPXXXXXXADSGTKKHISLLC*IGSLP*SHHHKAFGS 1369
N++PRYSQK F A+PCHT L+LP AD T+ H LC*IGS * H G
Sbjct: 589 NMLPRYSQKTRTFSANPCHTNLILPADVAVAADFETRLHRGPLC*IGSRL**HLRTVTG* 410
Query: 1368 GSA 1360
SA
Sbjct: 409 DSA 401
Score = 55.6 bits (115), Expect(3) = 5e-034
Identities = 27/58 (46%), Positives = 34/58 (58%)
Frame = +1 / +2
Query: 964 VAAAMGRI*IHSGSTRVTSTAAQFLQ*CRQFHHRPSLHQWG*IFHLIILDMEELALEV 1137
+A M + IHSG TR++ AA F *C QFHH+ S HQ G + H II E LA +
Sbjct: 2 LATRMVVVTIHSGLTRMSQVAAPFPP*CHQFHHQLSQHQQGSMGHQIIHTREALAFRI 175
Score = 55.1 bits (114), Expect(3) = 5e-045
Identities = 27/48 (56%), Positives = 33/48 (68%)
Frame = -3 / -1
Query: 1360 MTVVVSAKESGHLSSATR*ALVSFSCPMSVHGKTLFSRIVLVLCGSNP 1217
++V V +SGHLSS++R* + S SVHGKTL SR LVLC SNP
Sbjct: 389 VSVNVPWSKSGHLSSSSR*TWLFLSGVKSVHGKTLLSRSELVLCRSNP 246
Score = 50.1 bits (103), Expect(3) = 1e-027
Identities = 22/47 (46%), Positives = 29/47 (61%)
Frame = +2 / +3
Query: 989 EFTLVQPE*LQLQHNFYSDAASFTIGPLYINGAEXXXXXXXXWRNWH 1129
+F LV PE*++ QH+F+ DA SFTI L IN A+ R+WH
Sbjct: 27 QFILV*PE*VKWQHHFHRDATSFTINSLNINRAQWVTR*STLGRHWH 167
Score = 48.7 bits (100), Expect(3) = 2e-025
Identities = 26/47 (55%), Positives = 30/47 (63%)
Frame = -2 / -3
Query: 1130 NASSSMSRIIRWKIQPH*CREGRW*NWRHHCRNCAAVEVTLVEPE*I 990
NAS+S II I+P *C E W*NW HH N AA + LV+PE*I
Sbjct: 168 NASASRVWIIW*PIEPC*C*ES*W*NWWHHGGNGAAT*LILVKPE*I 28
Score = 48.7 bits (100), Expect(3) = 5e-034
Identities = 21/42 (50%), Positives = 27/42 (64%)
Frame = +1 / +2
Query: 1210 TVWDLNHRARAQFWRTVSSHGQTLDKKKIQGLT**RNLSGLT 1335
T WDL+ +A+A FW+ V SHGQ + KI T +N SGLT
Sbjct: 239 TAWDLSGKAQAHFWKVVFSHGQI*HQIKIAKFTLRKNSSGLT 364
Score = 45.5 bits (93), Expect(3) = 2e-025
Identities = 23/44 (52%), Positives = 26/44 (59%)
Frame = -1 / -2
Query: 1347 FRQRSQAT*VPLLGEPLYLFLVQCLSMGRHCSPELCSCSVVQIP 1216
F SQAT*V GE Y +LV LSMG+H PE+ C QIP
Sbjct: 376 FHGASQAT*VLPQGELGYFYLVLNLSMGKHYFPEVSLCFAAQIP 245
Score = 42.8 bits (87), Expect(3) = 6e-020
Identities = 22/61 (36%), Positives = 27/61 (44%)
Frame = -2 / -3
Query: 1334 VRPLKFRY*VSPCIFFLSNVCPWEDTVLQNCARALWFKSHTVXXXXXXXXXXXXXXXXPV 1155
VRPL+F V+ IF +CPWE+T Q A AL KS V P+
Sbjct: 363 VRPLEFFLKVNLAIFIWC*ICPWENTTFQK*ACALPLKSQAVASAASSTAAAARISSFPI 184
Query: 1154 E 1152
E
Sbjct: 183 E 181
Score = 42.3 bits (86), Expect(3) = 1e-027
Identities = 23/48 (47%), Positives = 27/48 (56%)
Frame = +2 / +3
Query: 1217 GI*TTEHEHNSGEQCLPMDRHWTRKRYKGSPSSGT*VA*LLCRNDHSH 1360
GI* +H+ SG+ C PMDR TR + SP T VA*L N H H
Sbjct: 246 GI*AAKHKLTSGK*CFPMDRFNTR*K*PSSP*GRTQVA*LAPWNIHGH 389
Score = 33.1 bits (66), Expect(3) = 6e-020
Identities = 21/53 (39%), Positives = 25/53 (47%)
Frame = -1 / -2
Query: 1149 NLLRYFQCQFLHVEDYQVEDSAPLM*RGPMVXXXXXXXXXXXXXSHSG*TRVN 991
N + Y +CQ L DY V A LM R MV +HSG*TR+N
Sbjct: 187 NRIGYSECQCLPSVDYLVTH*ALLMLRELMVKLVASRWKWCCHLTHSG*TRMN 29
Score = 22.1 bits (42), Expect(4) = 1e-062
Identities = 8/17 (47%), Positives = 13/17 (76%)
Frame = +3 / +2
Query: 1650 DTEIILHSCSSVEELAI 1700
+TEI +CSSV++ A+
Sbjct: 713 ETEINTDNCSSVKDTAV 763
>gb|CN138550.1|CN138550 OX1_64_A08.g1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_64_A08_A002 5', mRNA sequence
Length = 876
Score = 236 bits (510), Expect = 9e-061
Identities = 87/130 (66%), Positives = 106/130 (81%)
Frame = +3 / +3
Query: 258 MGRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINY 437
MG HSCC +QK+++GLWSPEEDEKL+ +IT HG+GCWS VP+ AGLQRCGKSCRLRWINY
Sbjct: 171 MGHHSCCNQQKVKRGLWSPEEDEKLIRYITTHGYGCWSEVPEKAGLQRCGKSCRLRWINY 350
Query: 438 LRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKG 617
LRPD++RG F +EE LII LHA++GNRW+ IA+ LPGRTDNEIKN WNS IKKK+R+
Sbjct: 351 LRPDIRRGRFTAEEEKLIISLHAIVGNRWAHIASHLPGRTDNEIKNYWNSWIKKKIRKPA 530
Query: 618 IDPNTHKPLT 647
+ + T
Sbjct: 531 MSTTSSSVTT 560
Score = 117 bits (251), Expect = 5e-025
Identities = 56/119 (47%), Positives = 74/119 (62%)
Frame = -2 / -2
Query: 614 FLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECPSLEVWPQI 435
+LP LLLD +P +LDL++ P Q+ N+ PPV + V+ DD++ + E PS +V ++
Sbjct: 527 WLPDLLLDP*IPVVLDLVVRPARQVAGNVGPPVANNGVEADDQLLLLRREPPSPDVRSEV 348
Query: 434 VYPPQPTTLSAPLKPSEFGNRAPAAMAMLCYVIHEFLILLRGPEPLSQLLLVAARMPPH 258
V PPQP L PL S G+ APAA+AM V E I LRGPEP LLLVAA + PH
Sbjct: 347 VDPPQPAALPTPL*TSFLGDLAPAAIAMGGDVSDELFIFLRGPEPPLHLLLVAAGVMPH 171
Score = 96.8 bits (205), Expect = 1e-018
Identities = 54/115 (46%), Positives = 57/115 (49%)
Frame = -3 / -3
Query: 601 FFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANAPLLRSGLR*FIHL 422
FFL+HEF FLISLSV PG A+ HL P A S N P L SGLR* IH
Sbjct: 514 FFLIHEFQ*FLISLSVRPGKWLAMWAHLLPTMAWRLMISFSSSAVNRPRLMSGLR*LIHR 335
Query: 421 SLQLFPHL*SPASLGTELQQPWPCFVMXXXXXXXXXXXXXXXXXFCL*QQECLPI 257
S QLFPH PA GT LQQP P VM FC QQE P+
Sbjct: 334 SRQLFPHRCRPAFSGTSLQQP*PWVVMYLMSFSSSSGDQSPLFTFCWLQQE*CPM 170
Score = 70.7 bits (148), Expect(2) = 2e-012
Identities = 38/72 (52%), Positives = 43/72 (59%)
Frame = +1 / +1
Query: 253 LRWGGILAATSRS*ERGSGPLRRMRNS*IT*QSMAMAAGALFPNSLGFKGAERVVG*GG* 432
L WG AATSR * GSGPLR+M++S T MAMAAGA P L + G R G GG
Sbjct: 166 LAWGITPAATSRR*RGGSGPLRKMKSSSDTSPPMAMAAGARSPRKLVYNGVGRAAGCGGS 345
Query: 433 TI*GQTSREGHS 468
T +TS EG S
Sbjct: 346 TTSDRTSGEGGS 381
Score = 65.2 bits (136), Expect(2) = 2e-010
Identities = 29/61 (47%), Positives = 40/61 (65%)
Frame = +2 / +2
Query: 260 GEAFLLLQAEAEKGALVP*GG*ETHESHNKAWPWLLELCSQTRWASKVRKEL*AEVDKLS 439
G + LL AE E+GALVP*G *+ H+ H+ W WLLE + W++ V +EL A VD+L
Sbjct: 173 GASLLLQPAEGEEGALVP*GR*KAHQIHHHPWLWLLERGPRESWSTTVWEELPAAVDQLP 352
Query: 440 E 442
+
Sbjct: 353 Q 355
Score = 45.5 bits (93), Expect = 0.003
Identities = 26/57 (45%), Positives = 31/57 (54%)
Frame = -1 / -1
Query: 429 STSAYNSFRTFEAQRVWEQSSSSHGHALLCDS*VSHPPQGTRAPFSASACSSKNASP 259
ST+A +S T Q SSSH H C * H PQGTRAP S SA S++ +P
Sbjct: 342 STAAGSSSHTVVDQLSRGPRSSSHSHGW*CI**AFHLPQGTRAPSSPSAGCSRSDAP 172
Score = 24.0 bits (46), Expect(2) = 2e-012
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = +2 / +2
Query: 515 EQVVSNCSAAARED***DQESMELVHQEE 601
+QV +C A D DQE +E + QEE
Sbjct: 428 QQVGPHCQPLAGPDGQRDQELLEFMDQEE 514
Score = 23.1 bits (44), Expect(2) = 2e-010
Identities = 10/23 (43%), Positives = 12/23 (52%)
Frame = +1 / +1
Query: 541 SCQGGLIMRSRIYGTRASRRS*G 609
+C+ G RSR G SRR G
Sbjct: 454 TCRAGRTTRSRTTGIHGSRRRSG 522
>gb|CW251032.1|CW251032 104_713_11223710_116_35063_055 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11223710, DNA
sequence
Length = 588
Score = 105 bits (224), Expect(3) = 9e-061
Identities = 44/71 (61%), Positives = 51/71 (71%)
Frame = +3 / -2
Query: 1335 SFAETTTVMQNQSQTLYDDVIKAESQFNIEGICASWFXXXXXXXXXXVAPDMYDKDLQRM 1514
+F +T MQN SQ+LY+DVIKAESQFNIEG+CA+W V D+YDKDLQRM
Sbjct: 221 TFTDTPATMQNLSQSLYEDVIKAESQFNIEGLCAAWSQNLQPQQHLQVVSDLYDKDLQRM 42
Query: 1515 QLSFENI*ALC 1547
LSFENI*A C
Sbjct: 41 SLSFENI*ATC 9
Score = 88.6 bits (187), Expect(3) = 9e-061
Identities = 36/52 (69%), Positives = 42/52 (80%)
Frame = +3 / -2
Query: 975 DGANMNSLWFNQSDFNCSTISTVMPPVSPSALSTSMGLNLPPDNPRHGGTGI 1130
+G + NS+WFNQ++ + STISTVMPPVSPS LSTS GLN PDNP GGTGI
Sbjct: 584 NGGSNNSVWFNQNESSGSTISTVMPPVSPSTLSTSTGLNGSPDNPHSGGTGI 429
Score = 84.5 bits (178), Expect(3) = 5e-045
Identities = 42/70 (60%), Positives = 46/70 (65%)
Frame = -3 / +1
Query: 1552 VEHNA*IFSKDSCILCKSLSYMSGATXXXXXXX*FWNQEAHIPSMLNWLSALITSS*SVW 1373
++H A*IFSKD ILCKSLSY S T F +Q A PSMLNWLSALITSS S W
Sbjct: 4 MQHVA*IFSKDKDILCKSLSYKSDTTCRCCCGCRF*DQAAQRPSMLNWLSALITSSYSDW 183
Query: 1372 LWFCMTVVVS 1343
L FC+ VS
Sbjct: 184 LRFCIVAGVS 213
Score = 83.1 bits (175), Expect(3) = 5e-045
Identities = 34/48 (70%), Positives = 38/48 (79%)
Frame = -3 / +1
Query: 1129 MPVPPCRGLSGGRFSPIDVERADGETGGITVEIVLQLKSLWLNQSEFI 986
MPVPP GLSG SP+DVER DGETGGITVE+VL L S WLNQ+E +
Sbjct: 430 MPVPPECGLSGDPLSPVDVERVDGETGGITVEMVLPLDSFWLNQTELL 573
Score = 81.7 bits (172), Expect(3) = 9e-061
Identities = 31/68 (45%), Positives = 40/68 (58%)
Frame = +3 / -2
Query: 1152 FYWDGTNPXXXXXXXXXXXXXXXFEPQSTSTILENSVFPWTDIGQEKDTRAHLVAELKWP 1331
FYW+ NP FE QSTS++LE+SVFPWTD+ +K+++ HL ELKWP
Sbjct: 416 FYWETANPSSSSSRGSSGSNSLGFERQSTSSLLESSVFPWTDLTPDKNSQVHLEEELKWP 237
Query: 1332 DSFAETTT 1355
D T T
Sbjct: 236 DLLHGTFT 213
Score = 81.3 bits (171), Expect(3) = 7e-032
Identities = 37/65 (56%), Positives = 43/65 (66%)
Frame = +1 / -3
Query: 1354 QSCRTRAKRFMMM*SRQRANST*KGYVLLGSRISSHSNSCR*HQTCMTRTCKECNYLLRI 1533
Q CR A M S+ RANST*+ V G +I SHSN CR*+Q CMTR C+EC LLRI
Sbjct: 202 QRCRILASHCTKMLSKPRANST*RASVQPGLKICSHSNICR*YQICMTRICRECPCLLRI 23
Query: 1534 SRHYV 1548
SR +V
Sbjct: 22 SRQHV 8
Score = 71.6 bits (150), Expect(3) = 7e-027
Identities = 33/64 (51%), Positives = 38/64 (59%)
Frame = +2 / -1
Query: 1361 AEPEPNAL**CDQGREPIQHRRDMCFLVPESXXXXXXXGSTRHV*QGLAKNATIF*EYLG 1540
AE P + C Q REPIQHR +C LV +S GS R V*QG A+N +F*EYLG
Sbjct: 195 AES*PVTVRRCYQSREPIQHRGPLCSLVSKSAATATSAGSIRFV*QGFAENVLVF*EYLG 16
Query: 1541 IMFH 1552
M H
Sbjct: 15 NMLH 4
Score = 62.0 bits (129), Expect(3) = 2e-024
Identities = 32/65 (49%), Positives = 38/65 (58%)
Frame = -2 / +3
Query: 1547 T*CLDILKR*LHSLQVLVIHVWCYXXXXXXXXXLEPRSTYPFYVELALCLDHIIIKRLAL 1368
T CLDILKR HSLQ+LVI + Y L P T YVELAL D+I ++ LA
Sbjct: 9 TCCLDILKRQGHSLQILVIQI*YYLQMLLWLQILRPGCTEALYVELALGFDNIFVQ*LAK 188
Query: 1367 VLHDC 1353
+LH C
Sbjct: 189 ILHRC 203
Score = 61.6 bits (128), Expect(3) = 6e-020
Identities = 31/63 (49%), Positives = 36/63 (57%)
Frame = -1 / +2
Query: 1548 NIMPRYSQKIVAFFASPCHTCLVLPXXXXXXADSGTKKHISLLC*IGSLP*SHHHKAFGS 1369
N++PRYSQK F A+PCHT L+LP AD T+ H LC*IGS * H G
Sbjct: 8 NMLPRYSQKTRTFSANPCHTNLILPADVAVAADFETRLHRGPLC*IGSRL**HLRTVTG* 187
Query: 1368 GSA 1360
SA
Sbjct: 188 DSA 196
Score = 55.1 bits (114), Expect(3) = 5e-045
Identities = 27/48 (56%), Positives = 33/48 (68%)
Frame = -3 / +1
Query: 1360 MTVVVSAKESGHLSSATR*ALVSFSCPMSVHGKTLFSRIVLVLCGSNP 1217
++V V +SGHLSS++R* + S SVHGKTL SR LVLC SNP
Sbjct: 208 VSVNVPWSKSGHLSSSSR*TWLFLSGVKSVHGKTLLSRSELVLCRSNP 351
Score = 48.7 bits (100), Expect(3) = 7e-032
Identities = 21/42 (50%), Positives = 27/42 (64%)
Frame = +1 / -3
Query: 1210 TVWDLNHRARAQFWRTVSSHGQTLDKKKIQGLT**RNLSGLT 1335
T WDL+ +A+A FW+ V SHGQ + KI T +N SGLT
Sbjct: 358 TAWDLSGKAQAHFWKVVFSHGQI*HQIKIAKFTLRKNSSGLT 233
Score = 48.3 bits (99), Expect(3) = 7e-032
Identities = 21/47 (44%), Positives = 29/47 (61%)
Frame = +2 / -1
Query: 989 EFTLVQPE*LQLQHNFYSDAASFTIGPLYINGAEXXXXXXXXWRNWH 1129
+F+LV PE*++ QH+ + DA SFTI L IN A+ R+WH
Sbjct: 570 QFSLV*PE*VKWQHHLHRDATSFTINSLNINRAQWVTR*STLGRHWH 430
Score = 47.3 bits (97), Expect(3) = 7e-027
Identities = 23/49 (46%), Positives = 28/49 (57%)
Frame = +1 / -3
Query: 991 IHSGSTRVTSTAAQFLQ*CRQFHHRPSLHQWG*IFHLIILDMEELALEV 1137
I SG TR++ AA *C QFHH+ S HQ G + H II E LA +
Sbjct: 568 IQSGLTRMSQVAAPSPP*CHQFHHQLSQHQQGSMGHQIIHTREALAFRI 422
Score = 45.5 bits (93), Expect(3) = 2e-024
Identities = 23/44 (52%), Positives = 26/44 (59%)
Frame = -1 / +2
Query: 1347 FRQRSQAT*VPLLGEPLYLFLVQCLSMGRHCSPELCSCSVVQIP 1216
F SQAT*V GE Y +LV LSMG+H PE+ C QIP
Sbjct: 221 FHGASQAT*VLPQGELGYFYLVLNLSMGKHYFPEVSLCFAAQIP 352
Score = 45.1 bits (92), Expect(3) = 2e-024
Identities = 24/47 (51%), Positives = 30/47 (63%)
Frame = -2 / +3
Query: 1130 NASSSMSRIIRWKIQPH*CREGRW*NWRHHCRNCAAVEVTLVEPE*I 990
NAS+S II I+P *C E W*NW HH + AA + LV+P+*I
Sbjct: 429 NASASRVWIIW*PIEPC*C*ES*W*NWWHHGGDGAAT*LILVKPD*I 569
Score = 42.8 bits (87), Expect(3) = 6e-020
Identities = 22/61 (36%), Positives = 27/61 (44%)
Frame = -2 / +3
Query: 1334 VRPLKFRY*VSPCIFFLSNVCPWEDTVLQNCARALWFKSHTVXXXXXXXXXXXXXXXXPV 1155
VRPL+F V+ IF +CPWE+T Q A AL KS V P+
Sbjct: 234 VRPLEFFLKVNLAIFIWC*ICPWENTTFQK*ACALPLKSQAVASAASSTAAAARISSFPI 413
Query: 1154 E 1152
E
Sbjct: 414 E 416
Score = 42.3 bits (86), Expect(3) = 7e-027
Identities = 23/48 (47%), Positives = 27/48 (56%)
Frame = +2 / -1
Query: 1217 GI*TTEHEHNSGEQCLPMDRHWTRKRYKGSPSSGT*VA*LLCRNDHSH 1360
GI* +H+ SG+ C PMDR TR + SP T VA*L N H H
Sbjct: 351 GI*AAKHKLTSGK*CFPMDRFNTR*K*PSSP*GRTQVA*LAPWNIHGH 208
Score = 33.1 bits (66), Expect(3) = 6e-020
Identities = 21/53 (39%), Positives = 25/53 (47%)
Frame = -1 / +2
Query: 1149 NLLRYFQCQFLHVEDYQVEDSAPLM*RGPMVXXXXXXXXXXXXXSHSG*TRVN 991
N + Y +CQ L DY V A LM R MV +HSG*TR+N
Sbjct: 410 NRIGYSECQCLPSVDYLVTH*ALLMLRELMVKLVASRWRWCCHLTHSG*TRLN 568
>gb|CD209759.1|CD209759 HS1_54_C12.g1_A012 Heat-shocked seedlings Sorghum bicolor cDNA
clone HS1_54_C12_A012 5', mRNA sequence
Length = 709
Score = 234 bits (505), Expect = 4e-060
Identities = 88/135 (65%), Positives = 107/135 (79%)
Frame = +3 / +2
Query: 258 MGRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINY 437
MGR CC K KG W+ EED++L+ +I HG GCW S+PK AGL RCGKSCRLRWINY
Sbjct: 104 MGRSPCCEKAHTNKGAWTKEEDDRLVAYIRAHGEGCWRSLPKAAGLMRCGKSCRLRWINY 283
Query: 438 LRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKG 617
LRPDLKRG F DE+DLII+LH++LGN+WS IAA+LPGRTDNEIKN WN+ I++KL +G
Sbjct: 284 LRPDLKRGNFTADEDDLIIKLHSLLGNKWSLIAARLPGRTDNEIKNYWNTHIRRKLLGRG 463
Query: 618 IDPNTHKPLTEADHG 662
IDP TH+P+ +A G
Sbjct: 464 IDPVTHRPIADAGAG 508
Score = 114 bits (244), Expect = 4e-024
Identities = 54/123 (43%), Positives = 76/123 (61%)
Frame = -2 / -1
Query: 626 GINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECPSLEV 447
G++A QL D RVP +LDL++ PP + R + RP V E++VQLDDEV V GE +LEV
Sbjct: 472 GVDAPAKQLPPDVRVPVVLDLVVRPPREPRGDERPLVAEEAVQLDDEVVLVGGEVAALEV 293
Query: 446 WPQIVYPPQPTTLSAPLKPSEFGNRAPAAMAMLCYVIHEFLILLRGPEPLSQLLLVAARM 267
++V P + L+A + G R PA A+ V H+ ++LL GP L ++ L+AAR
Sbjct: 292 GAEVVDPAEAAALAAAHQSGRLGQRPPAPFAVRADVRHQAVVLLLGPRALVRVRLLAARR 113
Query: 266 PPH 258
PPH
Sbjct: 112 PPH 104
Score = 95.9 bits (203), Expect = 2e-018
Identities = 52/104 (50%), Positives = 56/104 (53%)
Frame = -3 / -2
Query: 661 P*SASVSGLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXX 482
P AS G V GSMP SF M F FLISLSV PGS AA+ DHL PR C
Sbjct: 507 PAPASAMGRCVTGSMPLPSSFRRMCVFQ*FLISLSVRPGSRAAMSDHLLPRRLCSLMMRS 328
Query: 481 XXSWANAPLLRSGLR*FIHLSLQLFPHL*SPASLGTELQQPWPC 350
S P LRSG R* I QL P SPA+LG++ Q P PC
Sbjct: 327 SSSAVKLPRLRSGRR*LIQRRRQLLPQRISPAALGSDRQHPSPC 196
>gb|CN148942.1|CN148942 WOUND1_59_F10.g1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_59_F10_A002 5', mRNA sequence
Length = 949
Score = 234 bits (505), Expect = 4e-060
Identities = 88/135 (65%), Positives = 107/135 (79%)
Frame = +3 / +2
Query: 258 MGRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINY 437
MGR CC K KG W+ EED++L+ +I HG GCW S+PK AGL RCGKSCRLRWINY
Sbjct: 98 MGRSPCCEKAHTNKGAWTKEEDDRLVAYIRAHGEGCWRSLPKAAGLMRCGKSCRLRWINY 277
Query: 438 LRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKG 617
LRPDLKRG F DE+DLII+LH++LGN+WS IAA+LPGRTDNEIKN WN+ I++KL +G
Sbjct: 278 LRPDLKRGNFTADEDDLIIKLHSLLGNKWSLIAARLPGRTDNEIKNYWNTHIRRKLLGRG 457
Query: 618 IDPNTHKPLTEADHG 662
IDP TH+P+ +A G
Sbjct: 458 IDPVTHRPIADAGAG 502
Score = 114 bits (244), Expect = 4e-024
Identities = 54/123 (43%), Positives = 76/123 (61%)
Frame = -2 / -1
Query: 626 GINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECPSLEV 447
G++A QL D RVP +LDL++ PP + R + RP V E++VQLDDEV V GE +LEV
Sbjct: 466 GVDAPAKQLPPDVRVPVVLDLVVRPPREPRGDERPLVAEEAVQLDDEVVLVGGEVAALEV 287
Query: 446 WPQIVYPPQPTTLSAPLKPSEFGNRAPAAMAMLCYVIHEFLILLRGPEPLSQLLLVAARM 267
++V P + L+A + G R PA A+ V H+ ++LL GP L ++ L+AAR
Sbjct: 286 GAEVVDPAEAAALAAAHQSGRLGQRPPAPFAVRADVRHQAVVLLLGPRALVRVRLLAARR 107
Query: 266 PPH 258
PPH
Sbjct: 106 PPH 98
Score = 95.9 bits (203), Expect = 2e-018
Identities = 52/104 (50%), Positives = 56/104 (53%)
Frame = -3 / -2
Query: 661 P*SASVSGLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXX 482
P AS G V GSMP SF M F FLISLSV PGS AA+ DHL PR C
Sbjct: 501 PAPASAMGRCVTGSMPLPSSFRRMCVFQ*FLISLSVRPGSRAAMSDHLLPRRLCSLMMRS 322
Query: 481 XXSWANAPLLRSGLR*FIHLSLQLFPHL*SPASLGTELQQPWPC 350
S P LRSG R* I QL P SPA+LG++ Q P PC
Sbjct: 321 SSSAVKLPRLRSGRR*LIQRRRQLLPQRISPAALGSDRQHPSPC 190
>gb|CX611399.1|CX611399 ANR1_24_A06.g1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_24_A06_A002 5', mRNA sequence
Length = 771
Score = 234 bits (505), Expect = 4e-060
Identities = 86/133 (64%), Positives = 106/133 (79%)
Frame = +3 / +2
Query: 252 VEMGRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWI 431
+ MGR CC + L+KG W+PEED+KLM +I KHGHG W ++P+LAGL RCGKSCRLRW
Sbjct: 95 LSMGRSPCCDENGLKKGPWTPEEDQKLMEYIQKHGHGSWRALPRLAGLNRCGKSCRLRWT 274
Query: 432 NYLRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQ 611
+YLRPD+KRG F Q+EE I++LH+VLGN+WS IA LPGRTDNEIKN WN+ +KKKL Q
Sbjct: 275 SYLRPDIKRGKFTQEEEQTILQLHSVLGNKWSAIAKHLPGRTDNEIKNFWNTHLKKKLIQ 454
Query: 612 KGIDPNTHKPLTE 650
G DP TH+P T+
Sbjct: 455 MGFDPMTHRPRTD 493
Score = 142 bits (304), Expect = 2e-032
Identities = 59/122 (48%), Positives = 82/122 (67%)
Frame = -2 / -3
Query: 623 INAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECPSLEVW 444
+ A L QLLL VP ILDL++SPP ++ N P V +D V+L+D +FF+LGE PSL+VW
Sbjct: 466 VEAHLDQLLLQVGVPEILDLVVSPPREVFRNS*PFVAKDGVELEDGLFFLLGELPSLDVW 287
Query: 443 PQIVYPPQPTTLSAPLKPSEFGNRAPAAMAMLCYVIHEFLILLRGPEPLSQLLLVAARMP 264
PQ+ PPQP L+ P++P + +PA MA+L V+HE L+ RGP L + +L+ AR P
Sbjct: 286 PQVAGPPQPAALATPVEPGKPRQCSPAPMAVLLNVLHELLVFFRGPGALLETILITARRP 107
Query: 263 PH 258
H
Sbjct: 106 SH 101
Score = 137 bits (293), Expect = 7e-031
Identities = 62/103 (60%), Positives = 68/103 (66%)
Frame = -3 / -1
Query: 649 SVSGLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSW 470
SV G V+GS P +SFF F +FLISLSV PG C AI DHL PRT SW
Sbjct: 492 SVLGR*VIGSKPIWISFFFRWVFQKFLISLSVRPGRCFAIADHLLPRTEWSWRMVCSSSW 313
Query: 469 ANAPLLRSGLR*FIHLSLQLFPHL*SPASLGTELQQPWPCFVM 341
N PLL SGL+* +HLSLQL PHL SPASLG+ LQ PWPCF M
Sbjct: 312 VNFPLLMSGLK*LVHLSLQLLPHLLSPASLGSALQLPWPCF*M 184
Score = 62.0 bits (129), Expect(2) = 3e-011
Identities = 33/72 (45%), Positives = 39/72 (54%)
Frame = +1 / +3
Query: 256 RWGGILAATSRS*ERGSGPLRRMRNS*IT*QSMAMAAGALFPNSLGFKGAERVVG*GG*T 435
+W G+LA R GPL++ R+S T +S AM AG G G R G*GG
Sbjct: 99 QWEGLLAVMRMVSRRAPGPLKKTRSSWSTFRSTAMGAGEHCLGLPGSTGVARAAG*GGPA 278
Query: 436 I*GQTSREGHSP 471
*GQTSREG SP
Sbjct: 279 T*GQTSREGSSP 314
Score = 43.7 bits (89), Expect = 0.010
Identities = 30/67 (44%), Positives = 35/67 (52%)
Frame = -1 / -2
Query: 459 LS*GLASDSLSTSAYNSFRTFEAQRVWEQSSSSHGHALLCDS*VSHPPQGTRAPFSASAC 280
LS* LAS S STSA +S T A++ SSSHG A C * S QG+R P +
Sbjct: 302 LS*CLASSSWSTSACSSCHTC*ARQA*AVLSSSHGRASECTP*ASGLLQGSRGPS*DHSH 123
Query: 279 SSKNASP 259
SK P
Sbjct: 122 HSKETFP 102
Score = 40.9 bits (83), Expect(2) = 4e-004
Identities = 25/62 (40%), Positives = 36/62 (58%)
Frame = +2 / +1
Query: 257 DGEAFLLLQAEAEKGALVP*GG*ETHESHNKAWPWLLELCSQTRWASKVRKEL*AEVDKL 436
+G+ LL +++G L P* E H H++A PW LE + A +V +EL AEVD+L
Sbjct: 100 NGKVSLL**EWSQEGPLDP*RRPEAHGVHSEARPWELESTA*ACRAQQVWQELQAEVDQL 279
Query: 437 SE 442
E
Sbjct: 280 LE 285
Score = 28.6 bits (56), Expect(2) = 3e-011
Identities = 15/23 (65%), Positives = 15/23 (65%)
Frame = +1 / +3
Query: 550 GGLIMRSRIYGTRASRRS*GRKA 618
GGL RSRI GT RRS* R A
Sbjct: 393 GGLTTRSRISGTPT*RRS*SRWA 461
Score = 25.4 bits (49), Expect(2) = 4e-004
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +2 / +1
Query: 515 EQVVSNCSAAARED***DQESMELVHQEEAEAE 613
+Q+VS C D* DQE +E +EEA+ +
Sbjct: 358 QQMVSYCETPPWAD*QRDQEFLEHPPEEEADPD 456
>gb|CW435563.1|CW435563 fsbb001f151m11k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f151m11, DNA
sequence
Length = 450
Score = 150 bits (322), Expect(4) = 1e-058
Identities = 54/56 (96%), Positives = 56/56 (100%)
Frame = +3 / -1
Query: 228 WSSQVLHCVEMGRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGL 395
WSSQVLHC+EMGRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAG+
Sbjct: 219 WSSQVLHCIEMGRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGM 52
Score = 124 bits (266), Expect(4) = 4e-054
Identities = 52/54 (96%), Positives = 52/54 (96%)
Frame = -2 / +1
Query: 389 SEFGNRAPAAMAMLCYVIHEFLILLRGPEPLSQLLLVAARMPPHLNAMQNLGAP 228
SEFGNR PAAMAMLCYVIHEFLILLRGPEPLSQLLLVAARMPPHLNAMQNL AP
Sbjct: 58 SEFGNRTPAAMAMLCYVIHEFLILLRGPEPLSQLLLVAARMPPHLNAMQNLRAP 219
Score = 122 bits (260), Expect(3) = 4e-045
Identities = 50/55 (90%), Positives = 51/55 (92%)
Frame = +2 / -3
Query: 227 LELPGSALR*DGEAFLLLQAEAEKGALVP*GG*ETHESHNKAWPWLLELCSQTRW 391
LEL GSAL *DGEAFLLLQA+ EKGALVP*GG*ETHESHNKAWPWLLE CSQTRW
Sbjct: 220 LELSGSALH*DGEAFLLLQAKVEKGALVP*GG*ETHESHNKAWPWLLEFCSQTRW 56
Score = 119 bits (255), Expect(4) = 2e-042
Identities = 50/57 (87%), Positives = 51/57 (89%)
Frame = -1 / +3
Query: 390 QRVWEQSSSSHGHALLCDS*VSHPPQGTRAPFSASACSSKNASPSQRNAEPGSSNQT 220
QRVWEQ+SSSHGHALLCDS*VSHPPQGTRAPFS ACSSKNASPSQ NAEP SS T
Sbjct: 57 QRVWEQNSSSHGHALLCDS*VSHPPQGTRAPFSTFACSSKNASPSQCNAEPESSKFT 227
Score = 115 bits (245), Expect(2) = 2e-039
Identities = 51/54 (94%), Positives = 52/54 (96%)
Frame = +1 / -2
Query: 229 GAPRFCIALRWGGILAATSRS*ERGSGPLRRMRNS*IT*QSMAMAAGALFPNSL 390
GA RFCIALRWGGILAATS+S*ERGSGPLRRMRNS*IT*QSMAMAAG LFPNSL
Sbjct: 218 GALRFCIALRWGGILAATSKS*ERGSGPLRRMRNS*IT*QSMAMAAGVLFPNSL 57
Score = 84.9 bits (179), Expect(4) = 4e-054
Identities = 34/43 (79%), Positives = 38/43 (88%)
Frame = -3 / +1
Query: 133 LKQWEIAKVVATYIPMNGWASSEARIEQLHGCR*EISVESKER 5
LK+WEIAK YIP++ WAS+EARIEQLHGCR*EISVESKER
Sbjct: 322 LKEWEIAKFEVAYIPLDDWASAEARIEQLHGCR*EISVESKER 450
Score = 76.7 bits (161), Expect(4) = 1e-058
Identities = 30/40 (75%), Positives = 33/40 (82%)
Frame = +1 / -3
Query: 7 FPCFPLKSPICSHAVAQSWPQMKPNHSLVYKSLQPLQFPT 126
FPC PLKSPIC+ AVAQ PQ+KPNH +VYK LQ LQFPT
Sbjct: 448 FPCSPLKSPICNRAVAQF*PQLKPNHPVVYKLLQTLQFPT 329
Score = 74.8 bits (157), Expect(3) = 4e-045
Identities = 31/43 (72%), Positives = 34/43 (79%)
Frame = +2 / -1
Query: 5 PFLAFH*NLLSAAMQLLNPGLR*SPTIHWYISRYNLCNFPLLQ 133
PFLA H*NLLSA +QLLN L *SP I WYIS + LCNFPLL+
Sbjct: 450 PFLALH*NLLSATVQLLNSSLS*SPIIQWYISYFKLCNFPLLK 322
Score = 70.7 bits (148), Expect(2) = 2e-039
Identities = 32/40 (80%), Positives = 33/40 (82%)
Frame = +3 / -2
Query: 6 LSLLSTEISYLQPCSCSILASDEAQPFIGI*VATTFAISH 125
LSLLSTEISYLQPCSCSILAS EAQ GI* + FAISH
Sbjct: 449 LSLLSTEISYLQPCSCSILASAEAQSSSGI*ATSNFAISH 330
Score = 63.4 bits (132), Expect(4) = 2e-042
Identities = 28/40 (70%), Positives = 30/40 (75%)
Frame = -1 / +2
Query: 126 SGKLQRL*RLIYQ*MVGLHLRPGLSNCMAADRRFQWKARK 7
SGKLQ L LIY M+GL LR LSNC ADRRFQW+ARK
Sbjct: 329 SGKLQSLK*LIYHWMIGLQLRLELSNCTVADRRFQWRARK 448
Score = 59.7 bits (124), Expect(4) = 2e-025
Identities = 29/40 (72%), Positives = 31/40 (77%)
Frame = -2 / +3
Query: 125 VGNCKGCSDLYTNEWLGFI*GQD*ATAWLQIGDFSGKQGK 6
VGNCK S LYT LGF *G +*ATA LQIGDFSG+QGK
Sbjct: 330 VGNCKV*SSLYTTG*LGFS*G*N*ATARLQIGDFSGEQGK 449
Score = 47.8 bits (98), Expect(4) = 2e-025
Identities = 17/17 (100%), Positives = 17/17 (100%)
Frame = -3 / +2
Query: 391 PASLGTELQQPWPCFVM 341
PASLGTELQQPWPCFVM
Sbjct: 56 PASLGTELQQPWPCFVM 106
Score = 44.1 bits (90), Expect(4) = 2e-025
Identities = 18/20 (90%), Positives = 18/20 (90%)
Frame = -3 / +2
Query: 286 CL*QQECLPISTQCRTWELQ 227
CL*QQECLPIS QCRT ELQ
Sbjct: 161 CL*QQECLPISMQCRT*ELQ 220
Score = 34.5 bits (69), Expect(4) = 1e-058
Identities = 11/13 (84%), Positives = 12/13 (92%)
Frame = +3 / -2
Query: 189 LYIPQTCKLCEFG 227
+YIPQ CKLCEFG
Sbjct: 254 IYIPQACKLCEFG 216
Score = 31.3 bits (62), Expect(4) = 4e-054
Identities = 11/12 (91%), Positives = 11/12 (91%)
Frame = -3 / +1
Query: 226 PNSQSLQVCGMY 191
PNSQSLQ CGMY
Sbjct: 217 PNSQSLQACGMY 252
Score = 30.4 bits (60), Expect(4) = 4e-054
Identities = 11/13 (84%), Positives = 13/13 (100%)
Frame = -3 / +1
Query: 175 RTPSPVAQSFFDD 137
RTPSPVA+SFF+D
Sbjct: 274 RTPSPVARSFFND 312
Score = 26.3 bits (51), Expect(3) = 4e-045
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = +1 / -3
Query: 190 YTFRRPVSSVSL 225
YTF RPVSSV+L
Sbjct: 253 YTFHRPVSSVNL 218
Score = 25.8 bits (50), Expect(4) = 2e-042
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = -1 / +2
Query: 225 QTHRAYRSAECI 190
Q HRAYR ECI
Sbjct: 218 QIHRAYRPVECI 253
Score = 24.9 bits (48), Expect(4) = 1e-058
Identities = 11/13 (84%), Positives = 11/13 (84%)
Frame = +3 / -2
Query: 138 SSKKLCATGEGVR 176
S KKL ATGEGVR
Sbjct: 311 SLKKLRATGEGVR 273
Score = 22.6 bits (43), Expect(4) = 2e-042
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = -1 / +2
Query: 174 EHLLR*HRASS 142
EHLL+*H ASS
Sbjct: 275 EHLLQ*HEASS 307
Score = 22.1 bits (42), Expect(4) = 2e-025
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = -2 / +3
Query: 227 TKLTELTGLRNV 192
+K TELTGL NV
Sbjct: 216 SKFTELTGLWNV 251
>gb|CD210313.1|CD210313 HS1_50_F06.g1_A012 Heat-shocked seedlings Sorghum bicolor cDNA
clone HS1_50_F06_A012 5', mRNA sequence
Length = 674
Score = 228 bits (492), Expect = 3e-058
Identities = 84/131 (64%), Positives = 105/131 (80%)
Frame = +3 / +2
Query: 258 MGRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINY 437
MGR CC K KG W+ EED++L+ +I HG GCW S+PK AGL RCGKSCRLRWINY
Sbjct: 227 MGRSPCCEKAHTNKGAWTKEEDDRLVAYIKAHGEGCWRSLPKAAGLLRCGKSCRLRWINY 406
Query: 438 LRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKG 617
LRPDLKRG F ++E++LII+LH++LGN+WS IA +LPGRTDNEIKN WN+ I++KL +G
Sbjct: 407 LRPDLKRGNFTEEEDELIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTHIRRKLLSRG 586
Query: 618 IDPNTHKPLTE 650
IDP TH+P+ E
Sbjct: 587 IDPVTHRPINE 619
Score = 104 bits (221), Expect = 6e-021
Identities = 49/116 (42%), Positives = 70/116 (60%)
Frame = -2 / -2
Query: 605 QLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECPSLEVWPQIVYP 426
QL D RVP +LDL++ P Q + P V E++V+LDDE+ + E +LEV ++V P
Sbjct: 574 QLPPDVRVPVVLDLVVRPSRQPSSDQGPFVAEEAVELDDELVLLFREVAALEVGAEVVDP 395
Query: 425 PQPTTLSAPLKPSEFGNRAPAAMAMLCYVIHEFLILLRGPEPLSQLLLVAARMPPH 258
P+ L+A + G RAPA +A+ V HE ++LL GP L + L+AAR PPH
Sbjct: 394 PEAAALAAAQEAGGLGQRAPATLAVRLDVRHEAVVLLLGPRALVGVRLLAARRPPH 227
Score = 99.1 bits (210), Expect = 2e-019
Identities = 52/103 (50%), Positives = 57/103 (55%)
Frame = -3 / -3
Query: 649 SVSGLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSW 470
S+ G V GS+P SF M F FLISLSVLPGS AI DHL PR S
Sbjct: 618 SLMGRCVTGSIPLLSSFLRMCVFQ*FLISLSVLPGSLPAIRDHLLPRRLWSLMMSSSSSS 439
Query: 469 ANAPLLRSGLR*FIHLSLQLFPHL*SPASLGTELQQPWPCFVM 341
P LRSG R* IH QL P PA+LG+E QQP PC +M
Sbjct: 438 VKLPRLRSGRR*LIHRRRQLLPQRRRPAALGSERQQPSPCALM 310
Score = 48.7 bits (100), Expect = 3e-004
Identities = 35/112 (31%), Positives = 38/112 (33%)
Frame = +1 / +3
Query: 259 WGGILAATSRS*ERGSGPLRRMRNS*IT*QSMAMAAGALFPNSLGFKGAERVVG*GG*TI 438
WGG AA R+ R GP RR S T + A AGA P A R GG T
Sbjct: 228 WGGRRAARRRTPTRARGPRRRTTASWRTSRRTARVAGARCPRPPASCAAARAAASGGSTT 407
Query: 439 *GQTSREGHSPXXXXXXXXXXXXXXXXXXXXXQRSCQGGLIMRSRIYGTRAS 594
TS S C+ G RSR GTR S
Sbjct: 408 SAPTSSAATSRKRRTSSSSSSTASSATNGP*SLEGCREGRTTRSRTTGTRTS 563
>gb|CD428126.1|CD428126 ETH1_32_E12.g1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_32_E12_A002 5', mRNA sequence
Length = 608
Score = 228 bits (492), Expect = 3e-058
Identities = 84/131 (64%), Positives = 105/131 (80%)
Frame = +3 / +3
Query: 258 MGRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINY 437
MGR CC K KG W+ EED++L+ +I HG GCW S+PK AGL RCGKSCRLRWINY
Sbjct: 114 MGRSPCCEKAHTNKGAWTKEEDDRLVAYIKAHGEGCWRSLPKAAGLLRCGKSCRLRWINY 293
Query: 438 LRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKG 617
LRPDLKRG F ++E++LII+LH++LGN+WS IA +LPGRTDNEIKN WN+ I++KL +G
Sbjct: 294 LRPDLKRGNFTEEEDELIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTHIRRKLLSRG 473
Query: 618 IDPNTHKPLTE 650
IDP TH+P+ E
Sbjct: 474 IDPVTHRPINE 506
Score = 104 bits (221), Expect = 6e-021
Identities = 49/116 (42%), Positives = 70/116 (60%)
Frame = -2 / -1
Query: 605 QLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECPSLEVWPQIVYP 426
QL D RVP +LDL++ P Q + P V E++V+LDDE+ + E +LEV ++V P
Sbjct: 461 QLPPDVRVPVVLDLVVRPSRQPSSDQGPFVAEEAVELDDELVLLFREVAALEVGAEVVDP 282
Query: 425 PQPTTLSAPLKPSEFGNRAPAAMAMLCYVIHEFLILLRGPEPLSQLLLVAARMPPH 258
P+ L+A + G RAPA +A+ V HE ++LL GP L + L+AAR PPH
Sbjct: 281 PEAAALAAAQEAGGLGQRAPATLAVRLDVRHEAVVLLLGPRALVGVRLLAARRPPH 114
Score = 99.1 bits (210), Expect = 2e-019
Identities = 52/103 (50%), Positives = 57/103 (55%)
Frame = -3 / -2
Query: 649 SVSGLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSW 470
S+ G V GS+P SF M F FLISLSVLPGS AI DHL PR S
Sbjct: 505 SLMGRCVTGSIPLLSSFLRMCVFQ*FLISLSVLPGSLPAIRDHLLPRRLWSLMMSSSSSS 326
Query: 469 ANAPLLRSGLR*FIHLSLQLFPHL*SPASLGTELQQPWPCFVM 341
P LRSG R* IH QL P PA+LG+E QQP PC +M
Sbjct: 325 VKLPRLRSGRR*LIHRRRQLLPQRRRPAALGSERQQPSPCALM 197
Score = 48.7 bits (100), Expect = 3e-004
Identities = 35/112 (31%), Positives = 38/112 (33%)
Frame = +1 / +1
Query: 259 WGGILAATSRS*ERGSGPLRRMRNS*IT*QSMAMAAGALFPNSLGFKGAERVVG*GG*TI 438
WGG AA R+ R GP RR S T + A AGA P A R GG T
Sbjct: 115 WGGRRAARRRTPTRARGPRRRTTASWRTSRRTARVAGARCPRPPASCAAARAAASGGSTT 294
Query: 439 *GQTSREGHSPXXXXXXXXXXXXXXXXXXXXXQRSCQGGLIMRSRIYGTRAS 594
TS S C+ G RSR GTR S
Sbjct: 295 SAPTSSAATSRKRRTSSSSSSTASSATNGP*SLEGCREGRTTRSRTTGTRTS 450
>gb|CN138063.1|CN138063 OX1_61_A11.g1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_61_A11_A002 5', mRNA sequence
Length = 780
Score = 228 bits (492), Expect = 3e-058
Identities = 84/131 (64%), Positives = 105/131 (80%)
Frame = +3 / +3
Query: 258 MGRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINY 437
MGR CC K KG W+ EED++L+ +I HG GCW S+PK AGL RCGKSCRLRWINY
Sbjct: 198 MGRSPCCEKAHTNKGAWTKEEDDRLVAYIKAHGEGCWRSLPKAAGLLRCGKSCRLRWINY 377
Query: 438 LRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKG 617
LRPDLKRG F ++E++LII+LH++LGN+WS IA +LPGRTDNEIKN WN+ I++KL +G
Sbjct: 378 LRPDLKRGNFTEEEDELIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTHIRRKLLSRG 557
Query: 618 IDPNTHKPLTE 650
IDP TH+P+ E
Sbjct: 558 IDPVTHRPINE 590
Score = 104 bits (221), Expect = 6e-021
Identities = 49/116 (42%), Positives = 70/116 (60%)
Frame = -2 / -2
Query: 605 QLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECPSLEVWPQIVYP 426
QL D RVP +LDL++ P Q + P V E++V+LDDE+ + E +LEV ++V P
Sbjct: 545 QLPPDVRVPVVLDLVVRPSRQPSSDQGPFVAEEAVELDDELVLLFREVAALEVGAEVVDP 366
Query: 425 PQPTTLSAPLKPSEFGNRAPAAMAMLCYVIHEFLILLRGPEPLSQLLLVAARMPPH 258
P+ L+A + G RAPA +A+ V HE ++LL GP L + L+AAR PPH
Sbjct: 365 PEAAALAAAQEAGGLGQRAPATLAVRLDVRHEAVVLLLGPRALVGVRLLAARRPPH 198
Score = 99.1 bits (210), Expect = 2e-019
Identities = 52/103 (50%), Positives = 57/103 (55%)
Frame = -3 / -3
Query: 649 SVSGLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSW 470
S+ G V GS+P SF M F FLISLSVLPGS AI DHL PR S
Sbjct: 589 SLMGRCVTGSIPLLSSFLRMCVFQ*FLISLSVLPGSLPAIRDHLLPRRLWSLMMSSSSSS 410
Query: 469 ANAPLLRSGLR*FIHLSLQLFPHL*SPASLGTELQQPWPCFVM 341
P LRSG R* IH QL P PA+LG+E QQP PC +M
Sbjct: 409 VKLPRLRSGRR*LIHRRRQLLPQRRRPAALGSERQQPSPCALM 281
Score = 48.7 bits (100), Expect = 3e-004
Identities = 35/112 (31%), Positives = 38/112 (33%)
Frame = +1 / +1
Query: 259 WGGILAATSRS*ERGSGPLRRMRNS*IT*QSMAMAAGALFPNSLGFKGAERVVG*GG*TI 438
WGG AA R+ R GP RR S T + A AGA P A R GG T
Sbjct: 199 WGGRRAARRRTPTRARGPRRRTTASWRTSRRTARVAGARCPRPPASCAAARAAASGGSTT 378
Query: 439 *GQTSREGHSPXXXXXXXXXXXXXXXXXXXXXQRSCQGGLIMRSRIYGTRAS 594
TS S C+ G RSR GTR S
Sbjct: 379 SAPTSSAATSRKRRTSSSSSSTASSATNGP*SLEGCREGRTTRSRTTGTRTS 534
>gb|CD428558.1|CD428558 ETH1_27_H11.g1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_27_H11_A002 5', mRNA sequence
Length = 665
Score = 168 bits (362), Expect(2) = 6e-058
Identities = 62/75 (82%), Positives = 72/75 (96%)
Frame = +3 / +3
Query: 324 EKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRGAFAQDEEDLIIELH 503
+KL+NHI K+GHGCWSSVPKLAGL+RCGKSCRLRWINYLRPDLKRGAF+Q+EEDLII LH
Sbjct: 135 KKLINHIAKYGHGCWSSVPKLAGLERCGKSCRLRWINYLRPDLKRGAFSQEEEDLIIHLH 314
Query: 504 AVLGNRWSQIAAQLP 548
+++GN+WSQIA QLP
Sbjct: 315 SMMGNKWSQIATQLP 359
Score = 89.5 bits (189), Expect(2) = 2e-023
Identities = 40/77 (51%), Positives = 48/77 (62%)
Frame = -2 / -1
Query: 551 PWQLRCNLRPPVPEDSVQLDDEVFFVLGECPSLEVWPQIVYPPQPTTLSAPLKPSEFGNR 372
P QLRCNLRP V +++DDEV L EC LEV PQ+V PPQP L PL G+
Sbjct: 362 PRQLRCNLRPLVAHHGMEMDDEVLLFLRECSPLEVRPQVVDPPQPAALPTPL*TC*LGDG 183
Query: 371 APAAMAMLCYVIHEFLI 321
PAAMA+L V+ E L+
Sbjct: 182 TPAAMAILGNVVDELLL 132
Score = 85.4 bits (180), Expect(3) = 1e-028
Identities = 36/42 (85%), Positives = 36/42 (85%)
Frame = -3 / -2
Query: 466 NAPLLRSGLR*FIHLSLQLFPHL*SPASLGTELQQPWPCFVM 341
NAPLLRSGLR* IHLSLQLFPHL PASLGTELQQPWP M
Sbjct: 277 NAPLLRSGLR*LIHLSLQLFPHLSRPASLGTELQQPWPYLAM 152
Score = 79.0 bits (166), Expect(2) = 6e-058
Identities = 33/54 (61%), Positives = 37/54 (68%)
Frame = +3 / +1
Query: 549 GRTDNEIKNLWNSCIKKKLRQKGIDPNTHKPLTEADHGGAAPTISTERTSGSSD 710
GRTDNE+KN WNS IKKKLRQ+GIDP THKPL A A + RT+ SD
Sbjct: 361 GRTDNEVKNFWNSYIKKKLRQRGIDPATHKPLPLAADASRAAAAGSSRTAVFSD 522
Score = 54.7 bits (113), Expect(3) = 1e-028
Identities = 24/36 (66%), Positives = 28/36 (77%)
Frame = -3 / -1
Query: 655 SASVSGLWVLGSMPFCLSFFLMHEFHRFLISLSVLP 548
+AS SGL V GS+P C SFFLM+EF +FL SLSV P
Sbjct: 467 AASGSGLCVAGSIPRCRSFFLMYEFQKFLTSLSVRP 360
Score = 46.4 bits (95), Expect(3) = 2e-009
Identities = 19/39 (48%), Positives = 25/39 (64%)
Frame = +2 / +2
Query: 326 ETHESHNKAWPWLLELCSQTRWASKVRKEL*AEVDKLSE 442
E H+ H + WPWLLE Q + +V +EL AEVD+L E
Sbjct: 137 EAHQPHCQVWPWLLEFRPQASRSREVWEELQAEVDQLPE 253
Score = 42.8 bits (87), Expect(2) = 2e-023
Identities = 20/45 (44%), Positives = 27/45 (60%)
Frame = -2 / -3
Query: 683 ADGGSCTAVISLSKWLVGVGINAFLPQLLLDARVP*ILDLIISPP 549
A GG V + LV ++ LP+LLLD RVP +LDL++ PP
Sbjct: 495 ARGGGPAGVGGQRERLVRGRVDPALPELLLDVRVPEVLDLVVRPP 361
Score = 42.8 bits (87), Expect(2) = 8e-006
Identities = 25/48 (52%), Positives = 29/48 (60%)
Frame = +1 / +1
Query: 325 RNS*IT*QSMAMAAGALFPNSLGFKGAERVVG*GG*TI*GQTSREGHS 468
R+S T SMAMAAG P+ +G R G*GG T *G+TSR HS
Sbjct: 136 RSSSTTLPSMAMAAGVPSPS*QV*RGVGRAAG*GGSTT*GRTSRGEHS 279
Score = 39.6 bits (80), Expect(2) = 0.006
Identities = 24/56 (42%), Positives = 30/56 (53%)
Frame = -1 / -3
Query: 456 S*GLASDSLSTSAYNSFRTFEAQRVWEQSSSSHGHALLCDS*VSHPPQGTRAPFSA 289
S*G AS S STSA +S T W ++SSSHGH C * S + + +P A
Sbjct: 267 S*GPASGS*STSACSSSHTSLDLLAWGRNSSSHGHTWQCG**ASSWGRSSASPCRA 100
Score = 32.7 bits (65), Expect(3) = 2e-009
Identities = 15/24 (62%), Positives = 16/24 (66%)
Frame = +2 / +3
Query: 569 QESMELVHQEEAEAERH*SQHPQA 640
QE +ELVHQEEA A R H QA
Sbjct: 381 QELLELVHQEEAPAARDRPGHAQA 452
Score = 29.5 bits (58), Expect(2) = 8e-006
Identities = 21/54 (38%), Positives = 22/54 (40%)
Frame = +1 / +2
Query: 550 GGLIMRSRIYGTRASRRS*GRKALIPTPTSHLLRLITAVQLPPSAPREPQGPAT 711
GG RSR GTR SRRS G TS T PP A + AT
Sbjct: 362 GGRTTRSRTSGTRTSRRSSGSAGSTRPRTSRSRWPPTPAGPPPRAAAARRCSAT 523
Score = 27.2 bits (53), Expect(3) = 1e-028
Identities = 10/12 (83%), Positives = 10/12 (83%)
Frame = -3 / -2
Query: 547 GSCAAI*DHLFP 512
GSC AI*DHL P
Sbjct: 358 GSCVAI*DHLLP 323
Score = 22.6 bits (43), Expect(2) = 0.006
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = -1 / -3
Query: 546 AAALQFETTC 517
AAALQ ETTC
Sbjct: 357 AAALQSETTC 328
Score = 22.1 bits (42), Expect(3) = 2e-009
Identities = 8/11 (72%), Positives = 11/11 (100%)
Frame = +2 / +2
Query: 515 EQVVSNCSAAA 547
+QVVS+C+AAA
Sbjct: 326 QQVVSDCNAAA 358
>gb|CF074455.1|CF074455 FE1_24_A11.g1_A002 Iron-deficient seedlings Sorghum bicolor cDNA
clone FE1_24_A11_A002 5', mRNA sequence
Length = 691
Score = 133 bits (284), Expect(2) = 1e-056
Identities = 49/63 (77%), Positives = 54/63 (85%)
Frame = +3 / +2
Query: 204 TCKLCEFGWSSQVLHCVEMGRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPK 383
+C+LC S+ V + MGRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWS+VPK
Sbjct: 167 SCELCRLQSSASVSALLSMGRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSTVPK 346
Query: 384 LAG 392
LAG
Sbjct: 347 LAG 355
Score = 110 bits (235), Expect(2) = 1e-056
Identities = 43/46 (93%), Positives = 46/46 (100%)
Frame = +3 / +1
Query: 384 LAGLQRCGKSCRLRWINYLRPDLKRGAFAQDEEDLIIELHAVLGNR 521
+AGLQRCGKSCRLRWINYLRPDLKRGAF+Q+EEDLIIELHAVLGNR
Sbjct: 472 MAGLQRCGKSCRLRWINYLRPDLKRGAFSQEEEDLIIELHAVLGNR 609
Score = 66.6 bits (139), Expect(2) = 4e-022
Identities = 24/44 (54%), Positives = 34/44 (77%)
Frame = -2 / -2
Query: 521 PVPEDSVQLDDEVFFVLGECPSLEVWPQIVYPPQPTTLSAPLKP 390
PV + S++ +D+VFF+L EC S +V PQ++YPPQP L+ PLKP
Sbjct: 609 PVXQYSMKFNDKVFFLLRECTSFKVRPQVIYPPQPAALATPLKP 478
Score = 66.1 bits (138), Expect(2) = 1e-012
Identities = 29/42 (69%), Positives = 33/42 (78%)
Frame = +2 / +1
Query: 257 DGEAFLLLQAEAEKGALVP*GG*ETHESHNKAWPWLLELCSQ 382
+GEA LLLQAEAE+GALV *G *E HE HN+A WLLE C +
Sbjct: 220 NGEALLLLQAEAEEGALVS*GR*EAHEPHNQARAWLLEHCPE 345
Score = 64.8 bits (135), Expect(2) = 4e-022
Identities = 27/38 (71%), Positives = 30/38 (78%)
Frame = -2 / -1
Query: 371 APAAMAMLCYVIHEFLILLRGPEPLSQLLLVAARMPPH 258
APAAM +L YV+HE LI LR PEPL QLLLV A +PPH
Sbjct: 334 APAAMPVLGYVVHELLIFLRRPEPLPQLLLVTAGVPPH 221
Score = 63.4 bits (132), Expect(2) = 2e-020
Identities = 31/46 (67%), Positives = 32/46 (69%)
Frame = -3 / -3
Query: 523 HLFPRTACXXXXXXXXSWANAPLLRSGLR*FIHLSLQLFPHL*SPA 386
+L P TA S NAPLLRSGLR*FIHLSLQL PHL*SPA
Sbjct: 611 YLXPSTA*SSMIRSSSS*ENAPLLRSGLR*FIHLSLQLLPHL*SPA 474
Score = 62.0 bits (129), Expect(2) = 2e-020
Identities = 27/39 (69%), Positives = 30/39 (76%)
Frame = -1 / -3
Query: 375 QSSSSHGHALLCDS*VSHPPQGTRAPFSASACSSKNASP 259
Q SSSH A LC S* SH PQ TRAP SASAC+S++ASP
Sbjct: 338 QCSSSHARAWLCGS*ASHLPQETRAPSSASACNSRSASP 222
Score = 58.3 bits (121), Expect(2) = 6e-008
Identities = 29/46 (63%), Positives = 33/46 (71%)
Frame = +1 / +3
Query: 238 RFCIALRWGGILAATSRS*ERGSGPLRRMRNS*IT*QSMAMAAGAL 375
+F +WGG A TSRS* RGSG LR+MR+S* T* S MAAGAL
Sbjct: 201 QFQHCFQWGGTPAVTSRS*GRGSGLLRKMRSS*TT*PSTGMAAGAL 338
Score = 55.1 bits (114), Expect = 4e-006
Identities = 25/51 (49%), Positives = 26/51 (50%)
Frame = -3 / -2
Query: 391 PASLGTELQQPWPCFVMXXXXXXXXXXXXXXXXXFCL*QQECLPISTQCRT 239
PAS GT LQQP PC VM FCL*QQECLPI + T
Sbjct: 354 PASFGTVLQQPCPCLVMWFMSFSSSSGDQSPFLSFCL*QQECLPIESNAET 202
Score = 33.1 bits (66), Expect(2) = 1e-012
Identities = 15/26 (57%), Positives = 17/26 (65%)
Frame = +1 / +2
Query: 391 GFKGAERVVG*GG*TI*GQTSREGHS 468
GF+G R G*GG* *G T +E HS
Sbjct: 479 GFRGVARAAG*GG*IT*GLTLKEVHS 556
Score = 24.9 bits (48), Expect(2) = 6e-008
Identities = 12/17 (70%), Positives = 14/17 (82%)
Frame = +2 / +3
Query: 392 ASKVRKEL*AEVDKLSE 442
AS+V +EL AEVDKL E
Sbjct: 480 ASEVWQELQAEVDKLPE 530
>gb|CX611811.1|CX611811 ANR1_26_H01.g1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_26_H01_A002 5', mRNA sequence
Length = 808
Score = 222 bits (480), Expect = 1e-056
Identities = 82/131 (62%), Positives = 104/131 (79%)
Frame = +3 / +2
Query: 258 MGRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINY 437
MGR CC + L+KG W+ EEDEKL+++I K+GHG W ++P+LAGL CGKSCRLRW NY
Sbjct: 161 MGRSPCCDENGLKKGPWTQEEDEKLLHYIQKNGHGSWRTLPRLAGLNGCGKSCRLRWTNY 340
Query: 438 LRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKG 617
LRPD+KRG F+Q+EE I+ LH+VLGN+WS IA LPGRTD+EIKN WN+ +KK+L Q G
Sbjct: 341 LRPDIKRGKFSQEEEQTILHLHSVLGNKWSAIATHLPGRTDDEIKNFWNTHLKKRLIQMG 520
Query: 618 IDPNTHKPLTE 650
DP TH+P T+
Sbjct: 521 FDPMTHRPRTD 553
Score = 106 bits (227), Expect = 9e-022
Identities = 48/123 (39%), Positives = 74/123 (60%)
Frame = -2 / -1
Query: 626 GINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECPSLEV 447
G+ A L + LL+ VP + DL++ ++ + P V +D VQ+ D + +L E +L+V
Sbjct: 529 GVEAHLDEALLEVGVPEVFDLVVGAAGEVGGDGGPLVAQDGVQVQDGLLLLLRELATLDV 350
Query: 446 WPQIVYPPQPTTLSAPLKPSEFGNRAPAAMAMLCYVIHEFLILLRGPEPLSQLLLVAARM 267
Q+V P QP L+AP++ + G PAAM++L V+ + LI L P PL + +LVAAR
Sbjct: 349 RTQVVGPTQPAALAAPVQTGQPGQGPPAAMSVLLDVVQQLLIFLLSPGPLLEAILVAARR 170
Query: 266 PPH 258
PPH
Sbjct: 169 PPH 161
Score = 93.6 bits (198), Expect = 9e-018
Identities = 50/103 (48%), Positives = 55/103 (53%)
Frame = -3 / -2
Query: 649 SVSGLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSW 470
SV G V+GS P + FL F +FLIS SV PG A+ DHL PRT C S
Sbjct: 552 SVRGRCVMGSKPIWMRRFLRWVFQKFLISSSVRPGRWVAMADHLLPRTECRCRMVCSSSC 373
Query: 469 ANAPLLRSGLR*FIHLSLQLFPHL*SPASLGTELQQPWPCFVM 341
N P L SG R* + S QL PH PASLG LQ P P F M
Sbjct: 372 ENLPRLMSGRR*LVQRSRQLLPHPFRPASLGRVLQLPCPFFWM 244
Score = 42.8 bits (87), Expect = 0.019
Identities = 27/65 (41%), Positives = 33/65 (50%)
Frame = +1 / +3
Query: 259 WGGILAATSRS*ERGSGPLRRMRNS*IT*QSMAMAAGALFPNSLGFKGAERVVG*GG*TI 438
WGG+LAAT + RG G R+MR+ T + MAAG P GA R G G T
Sbjct: 162 WGGLLAATRMASRRGPGLKRKMRSCCTTSRRTDMAAGGPCPGWPV*TGAARAAGCVGPTT 341
Query: 439 *GQTS 453
+TS
Sbjct: 342 CVRTS 356
Score = 39.1 bits (79), Expect = 0.24
Identities = 22/59 (37%), Positives = 29/59 (49%)
Frame = -1 / -3
Query: 435 SLSTSAYNSFRTFEAQRVWEQSSSSHGHALLCDS*VSHPPQGTRAPFSASACSSKNASP 259
S S +A +S RT + W SSS H + C + SH P +RAP + SK SP
Sbjct: 338 SWSNAAGSSCRTRSDRPAWAGSSSCHVRSSGCSAAASHLPLESRAPS*GHSRRSKETSP 162
Score = 35.9 bits (72), Expect = 2.2
Identities = 22/59 (37%), Positives = 32/59 (54%)
Frame = +2 / +1
Query: 260 GEAFLLLQAEAEKGALVP*GG*ETHESHNKAWPWLLELCSQTRWASKVRKEL*AEVDKL 436
GE LL + ++GAL G *E H + W LE +Q + +VR+EL A +D+L
Sbjct: 163 GEVSLLRREWPQEGALDSRGR*EAAALHPEERTWQLEDPAQAGRSERVRQELPAALDQL 339
>gb|CX608115.1|CX608115 ANR1_32_F03.g1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_32_F03_A002 5', mRNA sequence
Length = 586
Score = 221 bits (477), Expect = 3e-056
Identities = 86/129 (66%), Positives = 101/129 (78%)
Frame = +3 / +2
Query: 258 MGRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINY 437
MGR CC K +++G W+ EED KL+N I +GH CW +VPKLAGL RCGKSCRLRW NY
Sbjct: 176 MGRQPCCDKLGVKRGPWTAEEDRKLINFILTNGHCCWRAVPKLAGLLRCGKSCRLRWTNY 355
Query: 438 LRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKG 617
LRPDLKRG EE ++I+LH LGNRWS+IAA+LPGRTDNEIKN WN+ IKKKL + G
Sbjct: 356 LRPDLKRGLLTDAEEQVVIDLHGKLGNRWSKIAAKLPGRTDNEIKNHWNTHIKKKLIKMG 535
Query: 618 IDPNTHKPL 644
IDP TH+PL
Sbjct: 536 IDPVTHEPL 562
Score = 119 bits (255), Expect = 1e-025
Identities = 61/127 (48%), Positives = 80/127 (62%)
Frame = -2 / -1
Query: 638 LVGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECP 459
LV I+A L QLLLD RVP +LDL++SP L NLRP V E SV++DD++ + E
Sbjct: 556 LVRDWIDAHLDQLLLDVRVPVVLDLVVSPAR*LGSNLRPSVAELSVEVDDDLLLGVREEA 377
Query: 458 SLEVWPQIVYPPQPTTLSAPLKPSEFGNRAPAAMAMLCYVIHEFLILLRGPEPLSQLLLV 279
+LEV ++V P Q L+A + E G+RAPAAMA+ + E +LLR P P LV
Sbjct: 376 ALEVRAEVVGPAQAAALAAAQQARELGHRAPAAMAVGQDEVDELAVLLRRPRPPLHPKLV 197
Query: 278 AARMPPH 258
AAR+PPH
Sbjct: 196 AARLPPH 176
Score = 101 bits (215), Expect = 4e-020
Identities = 56/128 (43%), Positives = 59/128 (46%)
Frame = -3 / -2
Query: 640 GLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANA 461
G V GSMP +SFFLM F FLISLSVLPGS AAI DHL P +
Sbjct: 558 GSCVTGSMPILISFFLMCVFQWFLISLSVLPGSLAAIFDHLLPSFPWRSMTTCSSASVRR 379
Query: 460 PLLRSGLR*FIHLSLQLFPHL*SPASLGTELQQPWPCFVMXXXXXXXXXXXXXXXXXFCL 281
P LRSG R* + QL P PASLGT QQ WP M L
Sbjct: 378 PRLRSGRR*LVQRRRQLLPQRSRPASLGTARQQQWPLVRMKLMSLRSSSAVHGPRFTPSL 199
Query: 280 *QQECLPI 257
Q C PI
Sbjct: 198 SQHGCRPI 175
Score = 44.1 bits (90), Expect(2) = 2e-009
Identities = 19/42 (45%), Positives = 27/42 (64%)
Frame = +2 / +1
Query: 515 EQVVSNCSAAARED***DQESMELVHQEEAEAERH*SQHPQA 640
+Q+V +C A +D* DQE +E HQEEA+ + H S H +A
Sbjct: 433 QQMVEDCCQATGQD*QRDQEPLEHAHQEEADQDGHRSSHARA 558
Score = 40.5 bits (82), Expect(2) = 2e-009
Identities = 28/72 (38%), Positives = 33/72 (45%)
Frame = +1 / +3
Query: 253 LRWGGILAATSRS*ERGSGPLRRMRNS*IT*QSMAMAAGALFPNSLGFKGAERVVG*GG* 432
L WGG AATS * G G RR +S + A+AAGA P+S A R G
Sbjct: 171 LGWGGSRAATSLG*SGGRGRRRRTASSSTSS*PTAIAAGARCPSSRACCAAARAAACAGP 350
Query: 433 TI*GQTSREGHS 468
T +TS S
Sbjct: 351 TTSARTSSAASS 386
Score = 35.9 bits (72), Expect = 2.2
Identities = 19/33 (57%), Positives = 21/33 (63%)
Frame = +1 / +3
Query: 541 SCQGGLIMRSRIYGTRASRRS*GRKALIPTPTS 639
S + GL RSR GTR SRRS* R A I + TS
Sbjct: 459 SYRAGLTTRSRTTGTRTSRRS*SRWASIQSRTS 557
>gb|CW491260.1|CW491260 fsbb001f281a22f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f281a22, DNA
sequence
Length = 623
Score = 158 bits (340), Expect(2) = 1e-054
Identities = 58/89 (65%), Positives = 70/89 (78%)
Frame = +3 / -1
Query: 258 MGRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINY 437
MGR CC K KG W+ EED++L+ +I HG GCW S+PK AGL RCGKSCRLRWINY
Sbjct: 551 MGRSPCCEKAHTNKGAWTKEEDDRLVAYIRAHGEGCWRSLPKAAGLMRCGKSCRLRWINY 372
Query: 438 LRPDLKRGAFAQDEEDLIIELHAVLGNRW 524
LRPDLKRG F DE+DLII+LH++LGN++
Sbjct: 371 LRPDLKRGNFTADEDDLIIKLHSLLGNKY 285
Score = 82.6 bits (174), Expect(2) = 1e-022
Identities = 38/87 (43%), Positives = 53/87 (60%)
Frame = -2 / +3
Query: 518 VPEDSVQLDDEVFFVLGECPSLEVWPQIVYPPQPTTLSAPLKPSEFGNRAPAAMAMLCYV 339
V E++VQLDDEV V GE +LEV ++V P + L+A + G R PA A+ V
Sbjct: 291 VAEEAVQLDDEVVLVGGEVAALEVGAEVVDPAEAAALAAAHQSGRLGQRPPAPFAVRADV 470
Query: 338 IHEFLILLRGPEPLSQLLLVAARMPPH 258
H+ ++LL GP L ++ L+AAR PPH
Sbjct: 471 RHQAVVLLLGPRALVRVRLLAARRPPH 551
Score = 81.7 bits (172), Expect(2) = 1e-054
Identities = 31/48 (64%), Positives = 39/48 (81%)
Frame = +3 / -2
Query: 519 RWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPNTHKPLTEADHG 662
RWS IAA+LPGRTDNEIKN WN+ I++KL +GIDP TH+P+ +A G
Sbjct: 148 RWSLIAARLPGRTDNEIKNYWNTHIRRKLLGRGIDPVTHRPIADAGAG 5
Score = 51.5 bits (106), Expect(2) = 3e-010
Identities = 25/58 (43%), Positives = 29/58 (50%)
Frame = -3 / +1
Query: 523 HLFPRTACXXXXXXXXSWANAPLLRSGLR*FIHLSLQLFPHL*SPASLGTELQQPWPC 350
+L PR C S P LRSG R* I QL P SPA+LG++ Q P PC
Sbjct: 286 YLLPRRLCSLMMRSSSSAVKLPRLRSGRR*LIQRRRQLLPQRISPAALGSDRQHPSPC 459
Score = 50.1 bits (103), Expect(2) = 1e-022
Identities = 28/48 (58%), Positives = 29/48 (60%)
Frame = -3 / +3
Query: 661 P*SASVSGLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHL 518
P AS G V GSMP SF M F FLISLSV PGS AA+ DHL
Sbjct: 6 PAPASAMGRCVTGSMPLPSSFRRMCVFQ*FLISLSVRPGSRAAMSDHL 149
Score = 39.6 bits (80), Expect(2) = 3e-010
Identities = 17/36 (47%), Positives = 24/36 (66%)
Frame = -2 / +2
Query: 626 GINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPP 519
G++A QL D RVP +LDL++ PP + R + RPP
Sbjct: 41 GVDAPAKQLPPDVRVPVVLDLVVRPPREPRGDERPP 148
>gb|CW215467.1|CW215467 104_647_11194554_116_37464_067 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11194554, DNA
sequence
Length = 615
Score = 170 bits (365), Expect(2) = 3e-054
Identities = 66/91 (72%), Positives = 78/91 (85%)
Frame = +3 / +3
Query: 378 PKLAGLQRCGKSCRLRWINYLRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRT 557
P AGL RCGKSCRLRW NYLRPDLKRG +++EE L+I+LHA LGNRWS+IAA+LPGRT
Sbjct: 228 PHPAGLLRCGKSCRLRWTNYLRPDLKRGLLSEEEEALVIDLHAQLGNRWSKIAARLPGRT 407
Query: 558 DNEIKNLWNSCIKKKLRQKGIDPNTHKPLTE 650
DNEIKN WN+ IKKKL++ GIDP TH+PL +
Sbjct: 408 DNEIKNHWNTHIKKKLKKMGIDPVTHRPLAQ 500
Score = 112 bits (239), Expect = 2e-023
Identities = 56/93 (60%), Positives = 58/93 (62%)
Frame = -3 / -3
Query: 643 SGLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWAN 464
SG WV GSMP LSFFLM F FLISLSVLPGS AAI DH P A S
Sbjct: 493 SGRWVTGSMPIFLSFFLMWVFQWFLISLSVLPGSRAAILDHRLPSCAWRSMTSASSSSER 314
Query: 463 APLLRSGLR*FIHLSLQLFPHL*SPASLGTELQ 365
PLLRSGLR* +H S QLFPHL SPA G + Q
Sbjct: 313 RPLLRSGLR*LVHRSRQLFPHLSSPAG*GRKRQ 215
Score = 91.3 bits (193), Expect(2) = 1e-023
Identities = 41/82 (50%), Positives = 55/82 (67%)
Frame = -2 / -2
Query: 635 VGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECPS 456
VG G++A L +LLLD VP +LDL++ PP + R +L PPV E V++DD+ +L E
Sbjct: 485 VGDGVDAHLLELLLDVGVPVVLDLVVRPPGEPRRDLGPPVAELRVEVDDQRLLLLREEAP 306
Query: 455 LEVWPQIVYPPQPTTLSAPLKP 390
LEV PQ+V PPQP L AP +P
Sbjct: 305 LEVRPQVVGPPQPAALPAPQQP 240
Score = 65.2 bits (136), Expect(2) = 3e-054
Identities = 23/40 (57%), Positives = 28/40 (70%)
Frame = +3 / +1
Query: 273 CCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAG 392
CC K L+KG W+ EED+KL+ + HGH CW VPKLAG
Sbjct: 7 CCEKVGLKKGPWTAEEDQKLVTFLLSHGHCCWRLVPKLAG 126
Score = 49.6 bits (102), Expect = 2e-004
Identities = 30/79 (37%), Positives = 33/79 (41%)
Frame = +1 / +1
Query: 400 GAERVVG*GG*TI*GQTSREGHSPXXXXXXXXXXXXXXXXXXXXXQRSCQGGLIMRSRIY 579
GA R G GG T *G+TSR S +R GG RSR
Sbjct: 250 GAGRAAGCGGPTT*GRTSRGASSRRRRRRWSSTSTRSSATGGPRSRRGSPGGRTTRSRTT 429
Query: 580 GTRASRRS*GRKALIPTPT 636
GT SRRS R A P+PT
Sbjct: 430 GTPTSRRSSRRWASTPSPT 486
Score = 41.8 bits (85), Expect = 0.036
Identities = 20/42 (47%), Positives = 26/42 (61%)
Frame = +2 / +2
Query: 515 EQVVSNCSAAARED***DQESMELVHQEEAEAERH*SQHPQA 640
+ VV + AA RED DQE +E HQEEA+ + H +HP A
Sbjct: 365 QPVVQDRGAAPREDGQRDQEPLEHPHQEEAQEDGHRPRHPPA 490
Score = 41.4 bits (84), Expect(2) = 1e-023
Identities = 19/43 (44%), Positives = 27/43 (62%)
Frame = -2 / -1
Query: 395 KPSEFGNRAPAAMAMLCYVIHEFLILLRGPEPLSQLLLVAARM 267
+ E G+ PAAMA+ + L+LLRGP PL + L+AAR+
Sbjct: 129 RTGELGDEPPAAMAVRQEEGDQLLVLLRGPRPLLETDLLAARL 1
>gb|CW258813.1|CW258813 104_724_11228081_116_35162_065 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11228081, DNA
sequence
Length = 623
Score = 156 bits (336), Expect(2) = 2e-053
Identities = 58/90 (64%), Positives = 69/90 (76%)
Frame = +3 / +1
Query: 252 VEMGRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWI 431
V MGR CC K KG W+ EEDE+L+ +I HG GCW S+PK AGL RCGKSCRLRW+
Sbjct: 10 VAMGRSPCCEKAHTNKGAWTKEEDERLVAYIRAHGEGCWRSLPKAAGLPRCGKSCRLRWM 189
Query: 432 NYLRPDLKRGAFAQDEEDLIIELHAVLGNR 521
NYLRPDLKRG F DE++LII LH++LGN+
Sbjct: 190 NYLRPDLKRGNFTDDEDELIIRLHSLLGNK 279
Score = 90.9 bits (192), Expect(2) = 2e-025
Identities = 40/87 (45%), Positives = 56/87 (64%)
Frame = -2 / -3
Query: 518 VPEDSVQLDDEVFFVLGECPSLEVWPQIVYPPQPTTLSAPLKPSEFGNRAPAAMAMLCYV 339
V E++VQ DDE+ V+GE +LEV ++V+PPQP L+A + G RAPA + V
Sbjct: 276 VAEEAVQADDELVLVVGEVAALEVRAEVVHPPQPAALAAARQARRLGQRAPAPFPVRPDV 97
Query: 338 IHEFLILLRGPEPLSQLLLVAARMPPH 258
H+ L+LL GP L ++ L+AAR PPH
Sbjct: 96 RHQPLVLLLGPRALVRVRLLAARRPPH 16
Score = 79.4 bits (167), Expect(2) = 2e-053
Identities = 32/52 (61%), Positives = 36/52 (69%)
Frame = +3 / +3
Query: 519 RWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPNTHKPLTEADHGGAAP 674
RWS IA QLPGRTDNEIKN WN+ IK+KL +GIDP TH+ L AP
Sbjct: 432 RWSLIAGQLPGRTDNEIKNYWNTHIKRKLLARGIDPQTHRALGVRADAATAP 587
Score = 64.8 bits (135), Expect(2) = 2e-014
Identities = 30/58 (51%), Positives = 32/58 (55%)
Frame = -3 / -1
Query: 523 HLFPRTACXXXXXXXXSWANAPLLRSGLR*FIHLSLQLFPHL*SPASLGTELQQPWPC 350
HL PR C S P LRSG R*FIH SLQL P PA+LG+E Q P PC
Sbjct: 281 HLLPRRLCRRMMSSSSSSVKLPRLRSGRR*FIHRSLQLLPQRGRPAALGSERQHPSPC 108
Score = 51.0 bits (105), Expect(2) = 2e-025
Identities = 28/52 (53%), Positives = 30/52 (57%)
Frame = -3 / -2
Query: 673 GAAPP*SASVSGLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHL 518
GA + + S V GSMP S LM F FLISLSV PGSC AI DHL
Sbjct: 586 GAVAASALTPSARCVCGSMPRARSLRLMCVFQ*FLISLSVRPGSCPAIRDHL 431
Score = 40.5 bits (82), Expect(2) = 2e-014
Identities = 22/52 (42%), Positives = 31/52 (59%)
Frame = -2 / -1
Query: 674 GSCTAVISLSKWLVGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPP 519
GS V S S+ V + ++A +L LD RVP +LDL++ P QL + RPP
Sbjct: 587 GSRGGVGSDSERAVRLRVDAAGQELALDVRVPVVLDLVVRPARQLPGDQRPP 432
Score = 32.2 bits (64), Expect(2) = 0.29
Identities = 17/34 (50%), Positives = 20/34 (58%)
Frame = +2 / +2
Query: 518 QVVSNCSAAARED***DQESMELVHQEEAEAERH 619
QVVS+ AAA D DQE +E HQ +A RH
Sbjct: 431 QVVSDRRAAAGPDGQRDQELLEHAHQAQAPGPRH 532
Score = 27.6 bits (54), Expect(2) = 0.29
Identities = 15/36 (41%), Positives = 17/36 (47%)
Frame = +1 / +2
Query: 364 AGALFPNSLGFKGAERVVG*GG*TI*GQTSREGHSP 471
AGA P + A R G GG*T +TS SP
Sbjct: 122 AGARCPRRRACRAAARAAGCGG*TTSARTSSAATSP 229
>gb|CW077690.1|CW077690 104_384_10893622_116_31916_070 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10893622, DNA
sequence
Length = 723
Score = 156 bits (336), Expect(2) = 2e-053
Identities = 58/90 (64%), Positives = 69/90 (76%)
Frame = +3 / +1
Query: 252 VEMGRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWI 431
V MGR CC K KG W+ EEDE+L+ +I HG GCW S+PK AGL RCGKSCRLRW+
Sbjct: 79 VAMGRSPCCEKAHTNKGAWTKEEDERLVAYIRAHGEGCWRSLPKAAGLPRCGKSCRLRWM 258
Query: 432 NYLRPDLKRGAFAQDEEDLIIELHAVLGNR 521
NYLRPDLKRG F DE++LII LH++LGN+
Sbjct: 259 NYLRPDLKRGNFTDDEDELIIRLHSLLGNK 348
Score = 90.9 bits (192), Expect(2) = 3e-025
Identities = 40/87 (45%), Positives = 56/87 (64%)
Frame = -2 / -1
Query: 518 VPEDSVQLDDEVFFVLGECPSLEVWPQIVYPPQPTTLSAPLKPSEFGNRAPAAMAMLCYV 339
V E++VQ DDE+ V+GE +LEV ++V+PPQP L+A + G RAPA + V
Sbjct: 345 VAEEAVQADDELVLVVGEVAALEVRAEVVHPPQPAALAAARQARRLGQRAPAPFPVRPDV 166
Query: 338 IHEFLILLRGPEPLSQLLLVAARMPPH 258
H+ L+LL GP L ++ L+AAR PPH
Sbjct: 165 RHQPLVLLLGPRALVRVRLLAARRPPH 85
Score = 79.4 bits (167), Expect(2) = 2e-053
Identities = 32/52 (61%), Positives = 36/52 (69%)
Frame = +3 / +3
Query: 519 RWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPNTHKPLTEADHGGAAP 674
RWS IA QLPGRTDNEIKN WN+ IK+KL +GIDP TH+ L AP
Sbjct: 501 RWSLIAGQLPGRTDNEIKNYWNTHIKRKLLARGIDPQTHRALGVRADAATAP 656
Score = 64.8 bits (135), Expect(2) = 2e-014
Identities = 30/58 (51%), Positives = 32/58 (55%)
Frame = -3 / -2
Query: 523 HLFPRTACXXXXXXXXSWANAPLLRSGLR*FIHLSLQLFPHL*SPASLGTELQQPWPC 350
HL PR C S P LRSG R*FIH SLQL P PA+LG+E Q P PC
Sbjct: 350 HLLPRRLCRRMMSSSSSSVKLPRLRSGRR*FIHRSLQLLPQRGRPAALGSERQHPSPC 177
Score = 51.0 bits (105), Expect(2) = 3e-025
Identities = 28/52 (53%), Positives = 30/52 (57%)
Frame = -3 / -3
Query: 673 GAAPP*SASVSGLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHL 518
GA + + S V GSMP S LM F FLISLSV PGSC AI DHL
Sbjct: 655 GAVAASALTPSARCVCGSMPRARSLRLMCVFQ*FLISLSVRPGSCPAIRDHL 500
Score = 40.5 bits (82), Expect(2) = 2e-014
Identities = 22/52 (42%), Positives = 31/52 (59%)
Frame = -2 / -2
Query: 674 GSCTAVISLSKWLVGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPP 519
GS V S S+ V + ++A +L LD RVP +LDL++ P QL + RPP
Sbjct: 656 GSRGGVGSDSERAVRLRVDAAGQELALDVRVPVVLDLVVRPARQLPGDQRPP 501
Score = 32.2 bits (64), Expect(2) = 0.33
Identities = 17/34 (50%), Positives = 20/34 (58%)
Frame = +2 / +2
Query: 518 QVVSNCSAAARED***DQESMELVHQEEAEAERH 619
QVVS+ AAA D DQE +E HQ +A RH
Sbjct: 500 QVVSDRRAAAGPDGQRDQELLEHAHQAQAPGPRH 601
Score = 27.6 bits (54), Expect(2) = 0.33
Identities = 15/36 (41%), Positives = 17/36 (47%)
Frame = +1 / +2
Query: 364 AGALFPNSLGFKGAERVVG*GG*TI*GQTSREGHSP 471
AGA P + A R G GG*T +TS SP
Sbjct: 191 AGARCPRRRACRAAARAAGCGG*TTSARTSSAATSP 298
>gb|CW099615.1|CW099615 104_466_11003648_116_34383_022 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11003648, DNA
sequence
Length = 664
Score = 101 bits (216), Expect(3) = 2e-053
Identities = 39/45 (86%), Positives = 42/45 (93%)
Frame = +3 / -2
Query: 387 AGLQRCGKSCRLRWINYLRPDLKRGAFAQDEEDLIIELHAVLGNR 521
AGLQRCGKSCRLRWINYLRPDLKRG+F+Q EEDLII LH +LGNR
Sbjct: 360 AGLQRCGKSCRLRWINYLRPDLKRGSFSQQEEDLIIALHEILGNR 226
Score = 84.0 bits (177), Expect(3) = 2e-053
Identities = 32/37 (86%), Positives = 33/37 (89%)
Frame = +3 / -2
Query: 288 KLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQ 398
KLRKGLWSPEEDEKL NHI +HG GCWSSVPKLAG Q
Sbjct: 588 KLRKGLWSPEEDEKLYNHIIRHGVGCWSSVPKLAGKQ 478
Score = 71.2 bits (149), Expect(3) = 2e-053
Identities = 26/30 (86%), Positives = 28/30 (93%)
Frame = +3 / -3
Query: 519 RWSQIAAQLPGRTDNEIKNLWNSCIKKKLR 608
RWSQIA+ LPGRTDNEIKN WNSC+KKKLR
Sbjct: 92 RWSQIASHLPGRTDNEIKNFWNSCLKKKLR 3
Score = 50.1 bits (103), Expect(3) = 1e-017
Identities = 21/48 (43%), Positives = 30/48 (62%)
Frame = -2 / +1
Query: 521 PVPEDSVQLDDEVFFVLGECPSLEVWPQIVYPPQPTTLSAPLKPSEFG 378
PV +D V+ DDEV +L E +LEV ++V PP+ L+A L+P G
Sbjct: 226 PVAQDLVERDDEVLLLLREAAALEVGAEVVDPPEAAALAAALQPCTHG 369
Score = 49.2 bits (101), Expect(3) = 1e-017
Identities = 21/31 (67%), Positives = 22/31 (70%)
Frame = -3 / +1
Query: 610 CLSFFLMHEFHRFLISLSVLPGSCAAI*DHL 518
C SFFL F +FLISLSV PG C AI DHL
Sbjct: 1 CRSFFLRQLFQKFLISLSVRPGKCDAICDHL 93
Score = 47.8 bits (98), Expect(3) = 2e-011
Identities = 18/30 (60%), Positives = 25/30 (83%)
Frame = -2 / +3
Query: 608 PQLLLDARVP*ILDLIISPPWQLRCNLRPP 519
P+LLL+A VP +LDL++ PP Q+R +LRPP
Sbjct: 3 PELLLEAAVPEVLDLVVRPPRQVRRDLRPP 92
Score = 36.3 bits (73), Expect(3) = 1e-017
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -3 / +2
Query: 391 PASLGTELQQPWPCFVM 341
PASLGTELQQP PC +M
Sbjct: 485 PASLGTELQQPTPCRMM 535
Score = 35.0 bits (70), Expect(2) = 5e-004
Identities = 15/25 (60%), Positives = 18/25 (72%)
Frame = +1 / -1
Query: 535 QRSCQGGLIMRSRIYGTRASRRS*G 609
+R+C+GG RSR GT ASRRS G
Sbjct: 76 RRTCRGGRTTRSRTSGTAASRRSSG 2
Score = 34.5 bits (69), Expect(2) = 5e-004
Identities = 19/38 (50%), Positives = 23/38 (60%)
Frame = +1 / -3
Query: 274 AATSRS*ERGSGPLRRMRNS*IT*QSMAMAAGALFPNS 387
AA S S R SG R+ R+ IT A AAGAL+P+S
Sbjct: 602 AACSPSSARASGRPRKTRSCTITSSDTASAAGALYPSS 489
Score = 33.6 bits (67), Expect(3) = 2e-011
Identities = 18/53 (33%), Positives = 23/53 (43%)
Frame = -1 / +3
Query: 387 RVWEQSSSSHGHALLCDS*VSHPPQGTRAPFSASACSSKNASPSQRNAEPGSS 229
R W QSSSS CD S P+ TR P A A + ++ + P S
Sbjct: 489 RAWVQSSSSRRRVG*CDCTASRLPRATRGPCGAWAARRRRRRRARPFSPPARS 647
Score = 32.7 bits (65), Expect(3) = 2e-011
Identities = 18/45 (40%), Positives = 19/45 (42%)
Frame = -3 / +2
Query: 520 LFPRTACXXXXXXXXSWANAPLLRSGLR*FIHLSLQLFPHL*SPA 386
L PR + P LRSG R* IH QL P SPA
Sbjct: 227 LLPRISWSAMMRSSSCCEKLPRLRSGRR*LIHRRRQLLPQRCSPA 361
Score = 31.8 bits (63), Expect(2) = 2.5
Identities = 16/35 (45%), Positives = 21/35 (60%)
Frame = +2 / -1
Query: 284 AEAEKGALVP*GG*ETHESHNKAWPWLLELCSQTR 388
A+A +G LV G E +SH+ LLELC+Q R
Sbjct: 592 AQAPQGPLVARGRREAVQSHHPTRRRLLELCTQAR 488
Score = 24.9 bits (48), Expect(2) = 2.5
Identities = 15/31 (48%), Positives = 19/31 (61%)
Frame = +2 / -2
Query: 518 QVVSNCSAAARED***DQESMELVHQEEAEA 610
QVV++ A A D DQE +E + QEEA A
Sbjct: 93 QVVADRVALAGADGQRDQELLEQLPQEEAPA 1
>gb|CW087483.1|CW087483 104_432_10947659_114_32550_046 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10947659, DNA
sequence
Length = 686
Score = 101 bits (216), Expect(3) = 2e-053
Identities = 39/45 (86%), Positives = 42/45 (93%)
Frame = +3 / +3
Query: 387 AGLQRCGKSCRLRWINYLRPDLKRGAFAQDEEDLIIELHAVLGNR 521
AGLQRCGKSCRLRWINYLRPDLKRG+F+Q EEDLII LH +LGNR
Sbjct: 318 AGLQRCGKSCRLRWINYLRPDLKRGSFSQQEEDLIIALHEILGNR 452
Score = 84.0 bits (177), Expect(3) = 2e-053
Identities = 32/37 (86%), Positives = 33/37 (89%)
Frame = +3 / +3
Query: 288 KLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQ 398
KLRKGLWSPEEDEKL NHI +HG GCWSSVPKLAG Q
Sbjct: 90 KLRKGLWSPEEDEKLYNHIIRHGVGCWSSVPKLAGKQ 200
Score = 71.2 bits (149), Expect(3) = 2e-053
Identities = 26/33 (78%), Positives = 29/33 (87%)
Frame = +3 / +1
Query: 519 RWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKG 617
RWSQIA+ LPGRTDNEIKN WNSC+KKKL +G
Sbjct: 586 RWSQIASHLPGRTDNEIKNFWNSCLKKKLPARG 684
Score = 50.1 bits (103), Expect(3) = 3e-017
Identities = 21/48 (43%), Positives = 30/48 (62%)
Frame = -2 / -1
Query: 521 PVPEDSVQLDDEVFFVLGECPSLEVWPQIVYPPQPTTLSAPLKPSEFG 378
PV +D V+ DDEV +L E +LEV ++V PP+ L+A L+P G
Sbjct: 452 PVAQDLVERDDEVLLLLREAAALEVGAEVVDPPEAAALAAALQPCTHG 309
Score = 48.3 bits (99), Expect(3) = 3e-017
Identities = 22/34 (64%), Positives = 23/34 (67%)
Frame = -3 / -1
Query: 619 MPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHL 518
MP SFFL F +FLISLSV PG C AI DHL
Sbjct: 686 MPRAGSFFLRQLFQKFLISLSVRPGKCDAICDHL 585
Score = 44.6 bits (91), Expect(3) = 5e-010
Identities = 17/29 (58%), Positives = 24/29 (82%)
Frame = -2 / -3
Query: 605 QLLLDARVP*ILDLIISPPWQLRCNLRPP 519
+LLL+A VP +LDL++ PP Q+R +LRPP
Sbjct: 672 ELLLEAAVPEVLDLVVRPPRQVRRDLRPP 586
Score = 36.3 bits (73), Expect(3) = 3e-017
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -3 / -2
Query: 391 PASLGTELQQPWPCFVM 341
PASLGTELQQP PC +M
Sbjct: 193 PASLGTELQQPTPCRMM 143
Score = 34.5 bits (69), Expect(2) = 0.001
Identities = 19/38 (50%), Positives = 23/38 (60%)
Frame = +1 / +1
Query: 274 AATSRS*ERGSGPLRRMRNS*IT*QSMAMAAGALFPNS 387
AA S S R SG R+ R+ IT A AAGAL+P+S
Sbjct: 76 AACSPSSARASGRPRKTRSCTITSSDTASAAGALYPSS 189
Score = 34.1 bits (68), Expect(2) = 0.001
Identities = 14/23 (60%), Positives = 17/23 (73%)
Frame = +1 / +2
Query: 535 QRSCQGGLIMRSRIYGTRASRRS 603
+R+C+GG RSR GT ASRRS
Sbjct: 602 RRTCRGGRTTRSRTSGTAASRRS 670
Score = 32.7 bits (65), Expect(3) = 5e-010
Identities = 18/45 (40%), Positives = 19/45 (42%)
Frame = -3 / -2
Query: 520 LFPRTACXXXXXXXXSWANAPLLRSGLR*FIHLSLQLFPHL*SPA 386
L PR + P LRSG R* IH QL P SPA
Sbjct: 451 LLPRISWSAMMRSSSCCEKLPRLRSGRR*LIHRRRQLLPQRCSPA 317
Score = 32.2 bits (64), Expect(3) = 5e-010
Identities = 16/35 (45%), Positives = 17/35 (48%)
Frame = -1 / -3
Query: 387 RVWEQSSSSHGHALLCDS*VSHPPQGTRAPFSASA 283
R W QSSSS CD S P+ TR P A A
Sbjct: 189 RAWVQSSSSRRRVG*CDCTASRLPRATRGPCGAWA 85
Score = 31.8 bits (63), Expect(2) = 0.23
Identities = 16/35 (45%), Positives = 21/35 (60%)
Frame = +2 / +2
Query: 284 AEAEKGALVP*GG*ETHESHNKAWPWLLELCSQTR 388
A+A +G LV G E +SH+ LLELC+Q R
Sbjct: 86 AQAPQGPLVARGRREAVQSHHPTRRRLLELCTQAR 190
Score = 28.6 bits (56), Expect(2) = 0.23
Identities = 16/34 (47%), Positives = 20/34 (58%)
Frame = +2 / +3
Query: 518 QVVSNCSAAARED***DQESMELVHQEEAEAERH 619
QVV++ A A D DQE +E + QEEA RH
Sbjct: 585 QVVADRVALAGADGQRDQELLEQLPQEEAPGTRH 686
>gb|CD212966.1|CD212966 HS1_17_F02.g1_A012 Heat-shocked seedlings Sorghum bicolor cDNA
clone HS1_17_F02_A012 5', mRNA sequence
Length = 595
Score = 211 bits (456), Expect = 2e-053
Identities = 79/122 (64%), Positives = 97/122 (79%)
Frame = +3 / +2
Query: 258 MGRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINY 437
MGR CC K KG W+ EED++L+ +I HG GCW S+PK AGL RCGKSCRLRWINY
Sbjct: 230 MGRSPCCEKAHTNKGAWTKEEDDRLVAYIKAHGEGCWRSLPKAAGLLRCGKSCRLRWINY 409
Query: 438 LRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKG 617
LRPDLKRG F ++E++LII+LH++LGN+WS IA +LPGRTDNEIKN WN+ I +KL +G
Sbjct: 410 LRPDLKRGNFTEEEDELIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTHIXRKLLSRG 589
Query: 618 ID 623
ID
Sbjct: 590 ID 595
Score = 105 bits (223), Expect = 3e-021
Identities = 49/116 (42%), Positives = 70/116 (60%)
Frame = -2 / -1
Query: 605 QLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECPSLEVWPQIVYP 426
QL D RVP +LDL++ P Q + P V E++V+LDDE+ + E +LEV ++V P
Sbjct: 577 QLPXDVRVPVVLDLVVRPSRQPSSDQGPFVAEEAVELDDELVLLFREVAALEVGAEVVDP 398
Query: 425 PQPTTLSAPLKPSEFGNRAPAAMAMLCYVIHEFLILLRGPEPLSQLLLVAARMPPH 258
P+ L+A + G RAPA +A+ V HE ++LL GP L + L+AAR PPH
Sbjct: 397 PEAAALAAAQEAGGLGQRAPATLAVRLDVRHEAVVLLLGPRALVGVRLLAARRPPH 230
Score = 92.7 bits (196), Expect = 2e-017
Identities = 48/94 (51%), Positives = 52/94 (55%)
Frame = -3 / -2
Query: 622 SMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANAPLLRSG 443
S+P SF M F FLISLSVLPGS AI DHL PR S P LRSG
Sbjct: 594 SIPLLSSFLXMCVFQ*FLISLSVLPGSLPAIRDHLLPRRLWSLMMSSSSSSVKLPRLRSG 415
Query: 442 LR*FIHLSLQLFPHL*SPASLGTELQQPWPCFVM 341
R* IH QL P PA+LG+E QQP PC +M
Sbjct: 414 RR*LIHRRRQLLPQRRRPAALGSERQQPSPCALM 313
Score = 49.2 bits (101), Expect = 2e-004
Identities = 36/115 (31%), Positives = 39/115 (33%)
Frame = +1 / +3
Query: 259 WGGILAATSRS*ERGSGPLRRMRNS*IT*QSMAMAAGALFPNSLGFKGAERVVG*GG*TI 438
WGG AA R+ R GP RR S T + A AGA P A R GG T
Sbjct: 231 WGGRRAARRRTPTRARGPRRRTTASWRTSRRTARVAGARCPRPPASCAAARAAASGGSTT 410
Query: 439 *GQTSREGHSPXXXXXXXXXXXXXXXXXXXXXQRSCQGGLIMRSRIYGTRASRRS 603
TS S C+ G RSR GTR S S
Sbjct: 411 SAPTSSAATSRKRRTSSSSSSTASSATNGP*SLEGCREGRTTRSRTTGTRTSXGS 575
>gb|CW163341.1|CW163341 104_571_11151411_116_36453_016 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11151411, DNA
sequence
Length = 707
Score = 158 bits (340), Expect(2) = 3e-053
Identities = 58/89 (65%), Positives = 70/89 (78%)
Frame = +3 / +2
Query: 258 MGRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINY 437
MGR CC K KG W+ EED++L+ +I HG GCW S+PK AGL RCGKSCRLRWINY
Sbjct: 86 MGRSPCCEKAHTNKGAWTKEEDDRLVAYIRAHGEGCWRSLPKAAGLMRCGKSCRLRWINY 265
Query: 438 LRPDLKRGAFAQDEEDLIIELHAVLGNRW 524
LRPDLKRG F DE+DLII+LH++LGN++
Sbjct: 266 LRPDLKRGNFTADEDDLIIKLHSLLGNKY 352
Score = 82.6 bits (174), Expect(2) = 2e-021
Identities = 38/87 (43%), Positives = 53/87 (60%)
Frame = -2 / -2
Query: 518 VPEDSVQLDDEVFFVLGECPSLEVWPQIVYPPQPTTLSAPLKPSEFGNRAPAAMAMLCYV 339
V E++VQLDDEV V GE +LEV ++V P + L+A + G R PA A+ V
Sbjct: 346 VAEEAVQLDDEVVLVGGEVAALEVGAEVVDPAEAAALAAAHQSGRLGQRPPAPFAVRADV 167
Query: 338 IHEFLILLRGPEPLSQLLLVAARMPPH 258
H+ ++LL GP L ++ L+AAR PPH
Sbjct: 166 RHQAVVLLLGPRALVRVRLLAARRPPH 86
Score = 77.1 bits (162), Expect(2) = 3e-053
Identities = 30/48 (62%), Positives = 38/48 (79%)
Frame = +3 / +3
Query: 519 RWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPNTHKPLTEADHG 662
RWS IAA+LPGRTDNEIKN WN+ I++KL +GIDP TH+ + +A G
Sbjct: 489 RWSLIAARLPGRTDNEIKNYWNTHIRRKLLGRGIDPVTHRLIADAGAG 632
Score = 51.5 bits (106), Expect(2) = 3e-010
Identities = 25/58 (43%), Positives = 29/58 (50%)
Frame = -3 / -3
Query: 523 HLFPRTACXXXXXXXXSWANAPLLRSGLR*FIHLSLQLFPHL*SPASLGTELQQPWPC 350
+L PR C S P LRSG R* I QL P SPA+LG++ Q P PC
Sbjct: 351 YLLPRRLCSLMMRSSSSAVKLPRLRSGRR*LIQRRRQLLPQRISPAALGSDRQHPSPC 178
Score = 46.4 bits (95), Expect(2) = 2e-021
Identities = 27/48 (56%), Positives = 28/48 (58%)
Frame = -3 / -2
Query: 661 P*SASVSGLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHL 518
P AS V GSMP SF M F FLISLSV PGS AA+ DHL
Sbjct: 631 PAPASAMRRCVTGSMPLPSSFRRMCVFQ*FLISLSVRPGSRAAMSDHL 488
Score = 39.6 bits (80), Expect(2) = 3e-010
Identities = 17/36 (47%), Positives = 24/36 (66%)
Frame = -2 / -1
Query: 626 GINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPP 519
G++A QL D RVP +LDL++ PP + R + RPP
Sbjct: 596 GVDAPAKQLPPDVRVPVVLDLVVRPPREPRGDERPP 489
>gb|BI098670.1|BI098670 IP1_35_D12.g1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 427
Score = 124 bits (265), Expect(4) = 5e-053
Identities = 52/63 (82%), Positives = 55/63 (87%)
Frame = -2 / -2
Query: 1808 VQKENINFQEKGKETLEHTFLCILLQLLMPGLSFP*YCQLFN*GTAVEDDFCINLTYLCE 1629
VQKE FQ K KETLE TFLCILL LLMPGLSFP*YCQ+FN*GTAVED+FCINL YLC+
Sbjct: 189 VQKETSIFQRKKKETLERTFLCILLPLLMPGLSFP*YCQVFN*GTAVEDNFCINLMYLCK 10
Query: 1628 QFS 1620
QFS
Sbjct: 9 QFS 1
Score = 121 bits (258), Expect(3) = 7e-048
Identities = 53/64 (82%), Positives = 55/64 (85%)
Frame = -1 / -1
Query: 1812 SCTEGKHQFSRERKGDSRTYFPMHPAATSNARAVLSLILPALQLRNSCGG*FLYQLNVSM 1633
SCTEG F + KGDSRT+F MH AATSNARAVLSLILP LQLRNSCGG*FLYQLNVSM
Sbjct: 193 SCTEGNINFPEKEKGDSRTHFSMHSAATSNARAVLSLILPGLQLRNSCGG*FLYQLNVSM 14
Query: 1632 *AIQ 1621
*AIQ
Sbjct: 13 *AIQ 2
Score = 119 bits (255), Expect(4) = 9e-051
Identities = 51/63 (80%), Positives = 54/63 (85%)
Frame = +1 / +2
Query: 1621 LNCSHRYVKLIQKSSSTAVPQLKSWQYQGKDSPGIRSCSRMHRKVCSRVSFPFS*KLMFS 1800
LNC HRY+KLIQK SSTAVPQLK+WQYQGKDSPGIRS SRMHRKV SRVSF F K+ S
Sbjct: 2 LNCLHRYIKLIQKLSSTAVPQLKTWQYQGKDSPGIRSGSRMHRKVRSRVSFFFLWKIDVS 181
Query: 1801 FCT 1809
FCT
Sbjct: 182 FCT 190
Score = 111 bits (238), Expect(3) = 8e-043
Identities = 47/64 (73%), Positives = 54/64 (84%)
Frame = -3 / -3
Query: 1813 VVYRRKTSIFKRKERRL*NILSYASCCNF*CQGCPFLDIASSSTEEQLWRMISVST*RIY 1634
++YRRK + ++RRL*N L YA CC+F*CQGCPFLDIA SSTEEQLWR+ISVST* IY
Sbjct: 194 LLYRRKHQFSRERKRRL*NALFYAFCCHF*CQGCPFLDIARSSTEEQLWRIISVST*CIY 15
Query: 1633 VSNS 1622
VSNS
Sbjct: 14 VSNS 3
Score = 102 bits (218), Expect(3) = 1e-037
Identities = 49/64 (76%), Positives = 52/64 (81%)
Frame = +2 / +3
Query: 1622 *IAHIDTLS*YRNHPPQLFLS*RAGNIKERTALALEVAAGCIGKYVLESPFLSLEN*CFP 1801
*IA+IDTLS*YRN+PPQLFLS*R GNIKERTALALEVAA CI K VLESPF FP
Sbjct: 3 *IAYIDTLS*YRNYPPQLFLS*RPGNIKERTALALEVAAECIEKCVLESPFSFSGKLMFP 182
Query: 1802 SVHD 1813
SV +
Sbjct: 183 SVQE 194
Score = 89.0 bits (188), Expect(3) = 8e-026
Identities = 40/45 (88%), Positives = 43/45 (95%)
Frame = +3 / +1
Query: 1620 AELLT*IR*VDTEIILHSCSSVEELAISRKGQPWH*KLQQDA*ES 1754
AELLT*I *VDTEIILHSCSSVE+LAISRKGQPWH*K QQ+A*+S
Sbjct: 1 AELLT*IH*VDTEIILHSCSSVEDLAISRKGQPWH*KWQQNA*KS 135
Score = 69.8 bits (146), Expect(3) = 1e-037
Identities = 30/50 (60%), Positives = 32/50 (64%)
Frame = +3 / +3
Query: 1842 LSGGN*INIDSHRQKCMCR*LSTCK*PQTFNCCHACPCKLIIACCIFHFF 1991
LSGGN*INIDSH Q CMCR*LS CK PQTF ++ FHFF
Sbjct: 228 LSGGN*INIDSHGQNCMCR*LSPCKQPQTFQLLPCTSMQINYCMLYFHFF 377
Score = 66.1 bits (138), Expect(4) = 5e-053
Identities = 25/29 (86%), Positives = 25/29 (86%)
Frame = -3 / -1
Query: 1930 KVWGYLHVESYRHMHFCLWLSIFI*FPPE 1844
KVWG LH ESYRHM FC WLSIFI*FPPE
Sbjct: 316 KVWGCLHGESYRHMQFCPWLSIFI*FPPE 230
Score = 62.9 bits (131), Expect(3) = 7e-048
Identities = 24/32 (75%), Positives = 26/32 (81%)
Frame = -1 / -2
Query: 1929 KFGATCTLRATDTCIFAYGYLYLFNFHQREQK 1834
KFGA C +RATDTC FA+G LYLFNFHQR K
Sbjct: 315 KFGAACMVRATDTCNFAHGCLYLFNFHQRVNK 220
Score = 61.1 bits (127), Expect(3) = 8e-043
Identities = 26/31 (83%), Positives = 29/31 (93%)
Frame = -2 / -3
Query: 1934 VESLGLLAR*ELPTHAFLPMAIYIYLISTRE 1842
++SLGLLA *ELPTHA LPMA+YIYLISTRE
Sbjct: 320 LKSLGLLAW*ELPTHAILPMAVYIYLISTRE 228
Score = 60.6 bits (126), Expect(4) = 9e-051
Identities = 23/30 (76%), Positives = 26/30 (86%)
Frame = +2 / +2
Query: 1841 SLWWKLNKYR*P*AKMHVSVALNVQVAPNF 1930
+LWWKLNKYR P AK+HVSVAL +Q APNF
Sbjct: 227 TLWWKLNKYRQPWAKLHVSVALTMQAAPNF 316
Score = 54.2 bits (112), Expect(4) = 9e-051
Identities = 19/24 (79%), Positives = 20/24 (83%)
Frame = +3 / +1
Query: 1920 PQTFNCCHACPCKLIIACCIFHFF 1991
P+ FNCCHA PCKLIIACCIF F
Sbjct: 307 PKLFNCCHARPCKLIIACCIFISF 378
Score = 51.0 bits (105), Expect(4) = 5e-053
Identities = 19/24 (79%), Positives = 20/24 (83%)
Frame = -2 / -2
Query: 1991 KEMKNTTCNN*FAWTCMAAVESLG 1920
K +NTTCNN*FAWTCMAAVE G
Sbjct: 378 KRNENTTCNN*FAWTCMAAVEKFG 307
Score = 49.2 bits (101), Expect = 2e-004
Identities = 18/20 (90%), Positives = 18/20 (90%)
Frame = +2 / +3
Query: 1928 FQLLPCMSMQINYCMLYFSF 1987
FQLLPC SMQINYCMLYF F
Sbjct: 315 FQLLPCTSMQINYCMLYFHF 374
Score = 48.3 bits (99), Expect(3) = 7e-048
Identities = 20/26 (76%), Positives = 21/26 (80%)
Frame = -3 / -3
Query: 1990 KK*KIQHAIINLHGHAWQQLKVWGYL 1913
K+ KIQHAIINLHG AWQQLK G L
Sbjct: 377 KEMKIQHAIINLHGRAWQQLKSLGLL 300
Score = 45.1 bits (92), Expect(3) = 8e-026
Identities = 18/22 (81%), Positives = 20/22 (90%)
Frame = +1 / +2
Query: 1915 SSPKLSTAAMHVHAN*LLHVVF 1980
++P STAAMHVHAN*LLHVVF
Sbjct: 302 AAPNFSTAAMHVHAN*LLHVVF 367
Score = 42.3 bits (86), Expect(3) = 8e-043
Identities = 17/18 (94%), Positives = 18/18 (100%)
Frame = -1 / -1
Query: 1980 KYNMQ*LICMDMHGSS*K 1927
KYNMQ*LICMD+HGSS*K
Sbjct: 367 KYNMQ*LICMDVHGSS*K 314
Score = 40.9 bits (83), Expect = 0.067
Identities = 23/53 (43%), Positives = 26/53 (49%)
Frame = +1 / +1
Query: 1834 FLFSLVEXXXXXXXXGKNACVGSSQRASSPKLSTAAMHVHAN*LLHVVFFISF 1992
F+ SLVE GK ACVGSS ASSPKL ++ FISF
Sbjct: 220 FVHSLVEIK*I*TAMGKIACVGSSHHASSPKLFNCCHARPCKLIIACCIFISF 378
Score = 26.3 bits (51), Expect(4) = 5e-053
Identities = 10/13 (76%), Positives = 12/13 (92%)
Frame = -1 / -1
Query: 1848 QREQKLKYAKVQS 1810
+ EQKLKYAKV+S
Sbjct: 232 ESEQKLKYAKVES 194
Score = 25.4 bits (49), Expect(3) = 1e-037
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = +1 / +2
Query: 1813 LNFCIFEFLFSL 1848
LNF IFEFLF+L
Sbjct: 197 LNFGIFEFLFTL 232
Score = 25.4 bits (49), Expect(4) = 9e-051
Identities = 10/12 (83%), Positives = 10/12 (83%)
Frame = +2 / +3
Query: 1811 D*TFAYLSFCSL 1846
D T AYLSFCSL
Sbjct: 195 DSTLAYLSFCSL 230
Score = 23.5 bits (45), Expect(3) = 8e-026
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +2 / +1
Query: 1772 FLSLEN*CF 1798
FLSLEN*CF
Sbjct: 154 FLSLEN*CF 180
>gb|AF474131.1| Sorghum bicolor typical P-type R2R3 Myb protein (Myb54) gene, partial
cds
Length = 1899
Score = 162 bits (348), Expect(2) = 9e-053
Identities = 63/85 (74%), Positives = 72/85 (84%)
Frame = +3 / +3
Query: 390 GLQRCGKSCRLRWINYLRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEI 569
GL RCGKSCRLRW NYLRPD+KRG + +EE +I+LH LGNRWS+IA+QLPGRTDNEI
Sbjct: 1545 GLLRCGKSCRLRWTNYLRPDVKRGLLSSEEERTVIDLHEQLGNRWSKIASQLPGRTDNEI 1724
Query: 570 KNLWNSCIKKKLRQKGIDPNTHKPL 644
KN WN+ IKKKLR+ GIDP THKPL
Sbjct: 1725 KNHWNTHIKKKLRKMGIDPVTHKPL 1799
Score = 108 bits (230), Expect(3) = 4e-028
Identities = 51/84 (60%), Positives = 54/84 (64%)
Frame = -3 / -3
Query: 640 GLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANA 461
GLWV GSMP LSFFLM F FLISLSVLPGSC AI DH FP +C S +
Sbjct: 1795 GLWVTGSMPIFLSFFLMCVFQWFLISLSVLPGSCDAILDHRFPSCSCRSITVLSSSDDSR 1616
Query: 460 PLLRSGLR*FIHLSLQLFPHL*SP 389
P L SG R* +H SLQLFPH SP
Sbjct: 1615 PRLTSGRR*LVHRSLQLFPHRSSP 1544
Score = 97.3 bits (206), Expect = 7e-019
Identities = 42/84 (50%), Positives = 58/84 (69%)
Frame = -2 / -2
Query: 650 LSKWLVGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVL 471
L + LVG G++A LP+LLLD RVP +LDL++ PP QLR +L PPVP+ VQ+D +
Sbjct: 1805 LMEGLVGDGVDAHLPELLLDVRVPVVLDLVVRPPRQLRRDLGPPVPQLLVQVDHRPLLLR 1626
Query: 470 GECPSLEVWPQIVYPPQPTTLSAP 399
+ +L+V P++V PPQP L AP
Sbjct: 1625 RQQAALDVRPEVVGPPQPAALPAP 1554
Score = 68.0 bits (142), Expect(2) = 9e-053
Identities = 24/45 (53%), Positives = 32/45 (71%)
Frame = +3 / +2
Query: 258 MGRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAG 392
MGR CC K L++G W+ EED+KL+ + +GH CW +VPKLAG
Sbjct: 1316 MGRQPCCAKVGLKRGPWTVEEDQKLVTFLLTNGHCCWRAVPKLAG 1450
Score = 49.6 bits (102), Expect(2) = 3e-006
Identities = 22/35 (62%), Positives = 25/35 (71%)
Frame = +1 / +1
Query: 535 QRSCQGGLIMRSRIYGTRASRRS*GRKALIPTPTS 639
+RSC+GG RSR GTR SRRS GR A P+PTS
Sbjct: 1690 RRSCRGGRTTRSRTTGTRTSRRSSGRWASTPSPTS 1794
Score = 45.1 bits (92), Expect = 0.004
Identities = 22/42 (52%), Positives = 27/42 (64%)
Frame = +2 / +2
Query: 515 EQVVSNCSAAARED***DQESMELVHQEEAEAERH*SQHPQA 640
E VV + AAA ED DQE +E HQEEA+ + H +HPQA
Sbjct: 1670 EPVVQDRVAAAGEDGQRDQEPLEHAHQEEAQEDGHRPRHPQA 1795
Score = 29.0 bits (57), Expect(2) = 3e-006
Identities = 18/44 (40%), Positives = 22/44 (50%)
Frame = +1 / +3
Query: 256 RWGGILAATSRS*ERGSGPLRRMRNS*IT*QSMAMAAGALFPNS 387
+WGG AA * G RR R+S + A AAGA P+S
Sbjct: 1314 QWGGNRAALRWG*RGARGRWRRTRSSSPSSSPTATAAGAPCPSS 1445
Score = 29.0 bits (57), Expect(3) = 4e-028
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = -2 / -3
Query: 332 EFLILLRGPEPLSQLLLVAARMPPH 258
E L+LL P Q L AAR+PPH
Sbjct: 1390 ELLVLLHRPRAPLQPHLSAARLPPH 1316
Score = 28.1 bits (55), Expect(3) = 4e-028
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = -3 / -1
Query: 394 SPASLGTELQQPWP 353
+PASLGT QQ WP
Sbjct: 1452 APASLGTARQQQWP 1411
>gb|CW354820.1|CW354820 fsbb001f019d03k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f019d03, DNA
sequence
Length = 471
Score = 209 bits (450), Expect = 2e-052
Identities = 78/121 (64%), Positives = 95/121 (78%)
Frame = +3 / -2
Query: 273 CCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINYLRPDL 452
C ++KG W+PEED+ L+++I +HGHG W +PKLAGL RCGKSCRLRW NYLRPD+
Sbjct: 365 CDQDAGVKKGPWTPEEDKVLVDYINEHGHGSWRRLPKLAGLNRCGKSCRLRWTNYLRPDI 186
Query: 453 KRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPNT 632
KRG F DEE LII LH++LGN+WS IA +LPGRTDNEIKN WN+ ++KKL GIDP T
Sbjct: 185 KRGRFTDDEEKLIIHLHSLLGNKWSSIATKLPGRTDNEIKNYWNTHLRKKLLSMGIDPVT 6
Query: 633 H 635
H
Sbjct: 5 H 3
Score = 91.8 bits (194), Expect = 3e-017
Identities = 40/107 (37%), Positives = 67/107 (62%)
Frame = -2 / +3
Query: 626 GINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECPSLEV 447
G++ QLL + RVP +LDL++ +L + P V E+ V++DDE+ V+G+ +L+V
Sbjct: 12 GVDPHGEQLLAEVRVPVVLDLVVGAAGELGGDGGPLVAEEGVEVDDELLLVVGKPAALDV 191
Query: 446 WPQIVYPPQPTTLSAPLKPSEFGNRAPAAMAMLCYVIHEFLILLRGP 306
++V P + L+AP++P E G APA + +L V+ + L+LLR P
Sbjct: 192 RAEVVCPAEAAALAAPVEPGELGQAAPAPVPVLIDVVDQHLVLLRRP 332
Score = 87.2 bits (184), Expect(2) = 9e-017
Identities = 47/97 (48%), Positives = 51/97 (52%)
Frame = -3 / +1
Query: 631 VLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANAPLL 452
V GS+P SF F FLISLSV PGS A+ DHL PR S N P L
Sbjct: 7 VTGSIPMESSFLRRCVFQ*FLISLSVRPGSLVAMEDHLLPRREWRWMMSFSSSSVNRPRL 186
Query: 451 RSGLR*FIHLSLQLFPHL*SPASLGTELQQPWPCFVM 341
SG R*F+ QL PH SPASLG Q P PC +M
Sbjct: 187 MSGRR*FVQRRRQLLPHRLSPASLGRRRQLPCPCSLM 297
Score = 43.7 bits (89), Expect = 0.010
Identities = 33/110 (30%), Positives = 37/110 (33%)
Frame = +1 / -3
Query: 274 AATSRS*ERGSGPLRRMRNS*IT*QSMAMAAGALFPNSLGFKGAERVVG*GG*TI*GQTS 453
A +R * + G RR R T S AGA P+S G GA R G T +TS
Sbjct: 364 ATRTRG*RKARGRRRRTRCWSTTSMSTGTGAGAACPSSPGSTGAARAAASAGQTTSARTS 185
Query: 454 REGHSPXXXXXXXXXXXXXXXXXXXXXQRSCQGGLIMRSRIYGTRASRRS 603
P S RSR GTR S RS
Sbjct: 184 SAAGLPTTRRSSSSTSTPSSATSGPPSPPSSPAAPTTRSRTTGTRTSARS 35
Score = 22.1 bits (42), Expect(2) = 9e-017
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = -2 / +3
Query: 341 VIHEFLILLRGPEPLSQLLLVAARMPPH 258
V ++L R L +LVAAR PPH
Sbjct: 300 VDQHLVLLRRPRAFLHPRVLVAAR*PPH 383
>gb|BE361115.1|BE361115 DG1_70_A01.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 590
Score = 208 bits (449), Expect = 2e-052
Identities = 77/123 (62%), Positives = 95/123 (77%)
Frame = +3 / +3
Query: 258 MGRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINY 437
MGR CC + KG W+ EED++L+ +I HG GCW S+PK AGL RCGKSCRLRWINY
Sbjct: 222 MGRSPCCEQAHTNKGAWTKEEDQRLIAYIKAHGEGCWRSLPKAAGLLRCGKSCRLRWINY 401
Query: 438 LRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKG 617
LRPDLKRG F ++E++LII+ H + GN+WS IA +LPGRTDNEIKN WN+ IK+KL +G
Sbjct: 402 LRPDLKRGNFTEEEDELIIKFHELFGNKWSLIAGRLPGRTDNEIKNYWNTHIKRKLLARG 581
Query: 618 IDP 626
DP
Sbjct: 582 TDP 590
Score = 120 bits (256), Expect = 9e-026
Identities = 57/116 (49%), Positives = 76/116 (65%)
Frame = -2 / -1
Query: 605 QLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECPSLEVWPQIVYP 426
+L LD RVP +LDL++ P Q + RP V E+ V+LDDE+ F+LGE +LEV ++V P
Sbjct: 569 ELPLDVRVPVVLDLVVRPARQSPGDERPLVAEELVELDDELVFLLGEVAALEVRAEVVDP 390
Query: 425 PQPTTLSAPLKPSEFGNRAPAAMAMLCYVIHEFLILLRGPEPLSQLLLVAARMPPH 258
PQP L AP +P F R+PAA+A+ V E L+LL GP L + L+AAR PPH
Sbjct: 389 PQPAALPAPQQPCGFWERSPAALAVGLDVGDEALVLLLGPRALVGVRLLAARGPPH 222
Score = 99.6 bits (211), Expect = 1e-019
Identities = 50/95 (52%), Positives = 59/95 (62%)
Frame = -3 / -2
Query: 625 GSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANAPLLRS 446
GS+P SF LM F FLISLSVLPGS A+ DHL P+++ S P LRS
Sbjct: 589 GSVPRARSFRLMCVFQ*FLISLSVLPGSLPAMSDHLLPKSSWNLMMSSSSSSVKLPRLRS 410
Query: 445 GLR*FIHLSLQLFPHL*SPASLGTELQQPWPCFVM 341
G R* IH S QLFPH SPA+ G++LQQP P +M
Sbjct: 409 GRR*LIHRSRQLFPHRSSPAAFGSDLQQPSPWALM 305
Score = 62.0 bits (129), Expect = 3e-008
Identities = 39/115 (33%), Positives = 44/115 (38%)
Frame = +1 / +1
Query: 259 WGGILAATSRS*ERGSGPLRRMRNS*IT*QSMAMAAGALFPNSLGFKGAERVVG*GG*TI 438
WGG AA+ R+ R GP RR S T + A AAG G GA R G GG T
Sbjct: 223 WGGPRAASRRTPTRARGPRRRTSASSPTSRPTARAAGDRSQKPQGCCGAGRAAGCGGSTT 402
Query: 439 *GQTSREGHSPXXXXXXXXXXXXXXXXXXXXXQRSCQGGLIMRSRIYGTRASRRS 603
+TS SP C+ G RSR GTR S S
Sbjct: 403 SARTSSAATSPRRKTSSSSSSTSSSATSGRSSPGDCRAGRTTRSRTTGTRTSSGS 567
>gb|CW454157.1|CW454157 fsbb001f198h17f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f198h17, DNA
sequence
Length = 543
Score = 147 bits (315), Expect(2) = 2e-052
Identities = 60/96 (62%), Positives = 73/96 (76%)
Frame = +3 / -1
Query: 843 PPKELFLEQLTAGHESPSTCHSSGQTLYFPFQQPLGYNSESGSSDGANMNSLWFNQSDFN 1022
PPKELFL+QL +GHE+ ++C S+G FPFQQ + YN+E G +G + NS WFNQ++ +
Sbjct: 543 PPKELFLDQLVSGHENLTSCRSTGPIPNFPFQQLMCYNNEFGHKNGGSNNSFWFNQNESS 364
Query: 1023 CSTISTVMPPVSPSALSTSMGLNLPPDNPRHGGTGI 1130
STISTVMPPVSPS LSTS GLN PDNP GGTGI
Sbjct: 363 GSTISTVMPPVSPSTLSTSTGLNGSPDNPHSGGTGI 256
Score = 83.1 bits (175), Expect(3) = 2e-031
Identities = 34/48 (70%), Positives = 38/48 (79%)
Frame = -3 / +2
Query: 1129 MPVPPCRGLSGGRFSPIDVERADGETGGITVEIVLQLKSLWLNQSEFI 986
MPVPP GLSG SP+DVER DGETGGITVE+VL L S WLNQ+E +
Sbjct: 257 MPVPPECGLSGDPLSPVDVERVDGETGGITVEMVLPLDSFWLNQNELL 400
Score = 82.6 bits (174), Expect(2) = 3e-023
Identities = 44/97 (45%), Positives = 57/97 (58%)
Frame = +1 / -2
Query: 847 QRSCSWSSLLLDTRVHQPATHQAKLSISLSNSP*ATTVRVAAAMGRI*IHSGSTRVTSTA 1026
+RS S +SL L + A QA+ ISLS+S ATT+ +A M + IHSG TR++ A
Sbjct: 539 RRSYSLTSLFLVMKTSLAAAQQAQFQISLSSS*CATTMNLATRMVVVTIHSGLTRMSQVA 360
Query: 1027 AQFLQ*CRQFHHRPSLHQWG*IFHLIILDMEELALEV 1137
A F *C QFHH+ S HQ G + H II E LA +
Sbjct: 359 APFPP*CHQFHHQLSQHQQGSMGHQIIHTREALAFRI 249
Score = 81.7 bits (172), Expect(2) = 2e-052
Identities = 31/68 (45%), Positives = 40/68 (58%)
Frame = +3 / -1
Query: 1152 FYWDGTNPXXXXXXXXXXXXXXXFEPQSTSTILENSVFPWTDIGQEKDTRAHLVAELKWP 1331
FYW+ NP FE QSTS++LE+SVFPWTD+ +K+++ HL ELKWP
Sbjct: 243 FYWETANPSSSSSRGSSGSNSLGFERQSTSSLLESSVFPWTDLTPDKNSQVHLEEELKWP 64
Query: 1332 DSFAETTT 1355
D T T
Sbjct: 63 DLLHGTFT 40
Score = 55.1 bits (114), Expect(3) = 2e-031
Identities = 27/48 (56%), Positives = 33/48 (68%)
Frame = -3 / +2
Query: 1360 MTVVVSAKESGHLSSATR*ALVSFSCPMSVHGKTLFSRIVLVLCGSNP 1217
++V V +SGHLSS++R* + S SVHGKTL SR LVLC SNP
Sbjct: 35 VSVNVPWSKSGHLSSSSR*TWLFLSGVKSVHGKTLLSRSELVLCRSNP 178
Score = 51.9 bits (107), Expect(2) = 3e-013
Identities = 35/77 (45%), Positives = 40/77 (51%)
Frame = -2 / +1
Query: 1130 NASSSMSRIIRWKIQPH*CREGRW*NWRHHCRNCAAVEVTLVEPE*IHIRPIXXXXXXXX 951
NAS+S II I+P *C E W*NW HH N AA + LV+PE*I I
Sbjct: 256 NASASRVWIIW*PIEPC*C*ES*W*NWWHHGGNGAAT*LILVKPE*IVTTTILVAKFIVV 435
Query: 950 XXXXLEREIESLA**VA 900
LEREI + A * A
Sbjct: 436 AHQLLEREIWNWAC*AA 486
Score = 50.1 bits (103), Expect(3) = 1e-017
Identities = 22/47 (46%), Positives = 29/47 (61%)
Frame = +2 / -3
Query: 989 EFTLVQPE*LQLQHNFYSDAASFTIGPLYINGAEXXXXXXXXWRNWH 1129
+F LV PE*++ QH+F+ DA SFTI L IN A+ R+WH
Sbjct: 397 QFILV*PE*VKWQHHFHRDATSFTINSLNINRAQWVTR*STLGRHWH 257
Score = 48.7 bits (100), Expect(2) = 3e-023
Identities = 21/42 (50%), Positives = 27/42 (64%)
Frame = +1 / -2
Query: 1210 TVWDLNHRARAQFWRTVSSHGQTLDKKKIQGLT**RNLSGLT 1335
T WDL+ +A+A FW+ V SHGQ + KI T +N SGLT
Sbjct: 185 TAWDLSGKAQAHFWKVVFSHGQI*HQIKIAKFTLRKNSSGLT 60
Score = 45.5 bits (93), Expect(2) = 3e-013
Identities = 23/44 (52%), Positives = 26/44 (59%)
Frame = -1 / +3
Query: 1347 FRQRSQAT*VPLLGEPLYLFLVQCLSMGRHCSPELCSCSVVQIP 1216
F SQAT*V GE Y +LV LSMG+H PE+ C QIP
Sbjct: 48 FHGASQAT*VLPQGELGYFYLVLNLSMGKHYFPEVSLCFAAQIP 179
Score = 42.8 bits (87), Expect(2) = 6e-007
Identities = 22/61 (36%), Positives = 27/61 (44%)
Frame = -2 / +1
Query: 1334 VRPLKFRY*VSPCIFFLSNVCPWEDTVLQNCARALWFKSHTVXXXXXXXXXXXXXXXXPV 1155
VRPL+F V+ IF +CPWE+T Q A AL KS V P+
Sbjct: 61 VRPLEFFLKVNLAIFIWC*ICPWENTTFQK*ACALPLKSQAVASAASSTAAAARISSFPI 240
Query: 1154 E 1152
E
Sbjct: 241 E 243
Score = 42.3 bits (86), Expect(3) = 1e-017
Identities = 23/48 (47%), Positives = 27/48 (56%)
Frame = +2 / -3
Query: 1217 GI*TTEHEHNSGEQCLPMDRHWTRKRYKGSPSSGT*VA*LLCRNDHSH 1360
GI* +H+ SG+ C PMDR TR + SP T VA*L N H H
Sbjct: 178 GI*AAKHKLTSGK*CFPMDRFNTR*K*PSSP*GRTQVA*LAPWNIHGH 35
Score = 38.6 bits (78), Expect(3) = 2e-031
Identities = 17/32 (53%), Positives = 20/32 (62%)
Frame = -3 / +2
Query: 940 CWKGK*RVWPDEWQVDGLSCPAVSCSRNSSFG 845
CWKGK + P E Q+ S P S SRN+SFG
Sbjct: 446 CWKGKFGIGPVERQLVRFS*PETSWSRNNSFG 541
Score = 37.3 bits (75), Expect(3) = 1e-017
Identities = 16/32 (50%), Positives = 20/32 (62%)
Frame = +2 / -3
Query: 848 KGAVPGAAYCWTRESINLPLIRPNSLFPFPTA 943
+G +P A W+ + LPL RPNS FPFP A
Sbjct: 538 EGVIP*PACFWS*KPH*LPLNRPNSKFPFPAA 443
Score = 33.1 bits (66), Expect(2) = 6e-007
Identities = 21/53 (39%), Positives = 25/53 (47%)
Frame = -1 / +3
Query: 1149 NLLRYFQCQFLHVEDYQVEDSAPLM*RGPMVXXXXXXXXXXXXXSHSG*TRVN 991
N + Y +CQ L DY V A LM R MV +HSG*TR+N
Sbjct: 237 NRIGYSECQCLPSVDYLVTH*ALLMLRELMVKLVASRWKWCCHLTHSG*TRMN 395
>gb|BI098588.1|BI098588 IP1_34_D01.g1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 414
Score = 117 bits (250), Expect(4) = 5e-051
Identities = 50/60 (83%), Positives = 51/60 (85%)
Frame = -1 / -1
Query: 1812 SCTEGKHQFSRERKGDSRTYFPMHPAATSNARAVLSLILPALQLRNSCGG*FLYQLNVSM 1633
SCTEG F + KGDSRTYF MH AATSNARAVLSLILP LQLRNSCGG*FLYQLNVSM
Sbjct: 180 SCTEGNINFQEKEKGDSRTYFSMHSAATSNARAVLSLILPGLQLRNSCGG*FLYQLNVSM 1
Score = 114 bits (243), Expect(4) = 2e-051
Identities = 49/60 (81%), Positives = 52/60 (86%)
Frame = +1 / +1
Query: 1633 HRYVKLIQKSSSTAVPQLKSWQYQGKDSPGIRSCSRMHRKVCSRVSFPFS*KLMFSFCTR 1812
HRY+KLIQK SSTAVPQLK+WQYQGKDSPGIRS SRMHRKV SRVSF F K+ SFCTR
Sbjct: 1 HRYIKLIQKLSSTAVPQLKTWQYQGKDSPGIRSGSRMHRKVRSRVSFFFLLKIDVSFCTR 180
Score = 113 bits (241), Expect(3) = 1e-045
Identities = 48/59 (81%), Positives = 51/59 (86%)
Frame = -2 / -2
Query: 1811 RVQKENINFQEKGKETLEHTFLCILLQLLMPGLSFP*YCQLFN*GTAVEDDFCINLTYL 1635
RVQKE F+ K KETLE TFLCILL LLMPGLSFP*YCQ+FN*GTAVED+FCINL YL
Sbjct: 179 RVQKETSIFKRKKKETLERTFLCILLPLLMPGLSFP*YCQVFN*GTAVEDNFCINLMYL 3
Score = 108 bits (230), Expect(3) = 9e-042
Identities = 45/60 (75%), Positives = 51/60 (85%)
Frame = -3 / -3
Query: 1813 VVYRRKTSIFKRKERRL*NILSYASCCNF*CQGCPFLDIASSSTEEQLWRMISVST*RIY 1634
VVYRRK + ++RRL*N+L YA CC+F*CQGCPFLDIA SSTEEQLWR+ISVST* IY
Sbjct: 181 VVYRRKHQFSRERKRRL*NVLFYAFCCHF*CQGCPFLDIARSSTEEQLWRIISVST*CIY 2
Score = 106 bits (226), Expect(3) = 1e-039
Identities = 49/60 (81%), Positives = 50/60 (83%)
Frame = +2 / +2
Query: 1634 IDTLS*YRNHPPQLFLS*RAGNIKERTALALEVAAGCIGKYVLESPFLSLEN*CFPSVHD 1813
IDTLS*YRN+PPQLFLS*R GNIKERTALALEVAA CI KYVLESPF FPSVHD
Sbjct: 2 IDTLS*YRNYPPQLFLS*RPGNIKERTALALEVAAECIEKYVLESPFSFS*KLMFPSVHD 181
Score = 79.0 bits (166), Expect(4) = 2e-026
Identities = 35/40 (87%), Positives = 38/40 (95%)
Frame = +3 / +3
Query: 1635 *IR*VDTEIILHSCSSVEELAISRKGQPWH*KLQQDA*ES 1754
*I *VDTEIILHSCSSVE+LAISRKGQPWH*K QQ+A*+S
Sbjct: 3 *IH*VDTEIILHSCSSVEDLAISRKGQPWH*KWQQNA*KS 122
Score = 69.8 bits (146), Expect(3) = 1e-039
Identities = 30/50 (60%), Positives = 32/50 (64%)
Frame = +3 / +2
Query: 1842 LSGGN*INIDSHRQKCMCR*LSTCK*PQTFNCCHACPCKLIIACCIFHFF 1991
LSGGN*INIDSH Q CMCR*LS CK PQTF ++ FHFF
Sbjct: 215 LSGGN*INIDSHGQNCMCR*LSPCKQPQTFQLLPCTSMQINYCMLYFHFF 364
Score = 66.1 bits (138), Expect(4) = 5e-051
Identities = 25/29 (86%), Positives = 25/29 (86%)
Frame = -3 / -1
Query: 1930 KVWGYLHVESYRHMHFCLWLSIFI*FPPE 1844
KVWG LH ESYRHM FC WLSIFI*FPPE
Sbjct: 303 KVWGCLHGESYRHMQFCPWLSIFI*FPPE 217
Score = 62.9 bits (131), Expect(3) = 1e-045
Identities = 24/32 (75%), Positives = 26/32 (81%)
Frame = -1 / -2
Query: 1929 KFGATCTLRATDTCIFAYGYLYLFNFHQREQK 1834
KFGA C +RATDTC FA+G LYLFNFHQR K
Sbjct: 302 KFGAACMVRATDTCNFAHGCLYLFNFHQRVNK 207
Score = 61.1 bits (127), Expect(3) = 9e-042
Identities = 26/31 (83%), Positives = 29/31 (93%)
Frame = -2 / -3
Query: 1934 VESLGLLAR*ELPTHAFLPMAIYIYLISTRE 1842
++SLGLLA *ELPTHA LPMA+YIYLISTRE
Sbjct: 307 LKSLGLLAW*ELPTHAILPMAVYIYLISTRE 215
Score = 60.6 bits (126), Expect(4) = 2e-051
Identities = 23/30 (76%), Positives = 26/30 (86%)
Frame = +2 / +1
Query: 1841 SLWWKLNKYR*P*AKMHVSVALNVQVAPNF 1930
+LWWKLNKYR P AK+HVSVAL +Q APNF
Sbjct: 214 TLWWKLNKYRQPWAKLHVSVALTMQAAPNF 303
Score = 54.2 bits (112), Expect(4) = 2e-051
Identities = 19/24 (79%), Positives = 20/24 (83%)
Frame = +3 / +3
Query: 1920 PQTFNCCHACPCKLIIACCIFHFF 1991
P+ FNCCHA PCKLIIACCIF F
Sbjct: 294 PKLFNCCHARPCKLIIACCIFISF 365
Score = 51.0 bits (105), Expect(4) = 5e-051
Identities = 19/24 (79%), Positives = 20/24 (83%)
Frame = -2 / -2
Query: 1991 KEMKNTTCNN*FAWTCMAAVESLG 1920
K +NTTCNN*FAWTCMAAVE G
Sbjct: 365 KRNENTTCNN*FAWTCMAAVEKFG 294
Score = 49.2 bits (101), Expect(4) = 2e-026
Identities = 18/20 (90%), Positives = 18/20 (90%)
Frame = +2 / +2
Query: 1928 FQLLPCMSMQINYCMLYFSF 1987
FQLLPC SMQINYCMLYF F
Sbjct: 302 FQLLPCTSMQINYCMLYFHF 361
Score = 48.3 bits (99), Expect(3) = 1e-045
Identities = 20/26 (76%), Positives = 21/26 (80%)
Frame = -3 / -3
Query: 1990 KK*KIQHAIINLHGHAWQQLKVWGYL 1913
K+ KIQHAIINLHG AWQQLK G L
Sbjct: 364 KEMKIQHAIINLHGRAWQQLKSLGLL 287
Score = 45.1 bits (92), Expect = 0.004
Identities = 18/22 (81%), Positives = 20/22 (90%)
Frame = +1 / +1
Query: 1915 SSPKLSTAAMHVHAN*LLHVVF 1980
++P STAAMHVHAN*LLHVVF
Sbjct: 289 AAPNFSTAAMHVHAN*LLHVVF 354
Score = 42.3 bits (86), Expect(3) = 9e-042
Identities = 17/18 (94%), Positives = 18/18 (100%)
Frame = -1 / -1
Query: 1980 KYNMQ*LICMDMHGSS*K 1927
KYNMQ*LICMD+HGSS*K
Sbjct: 354 KYNMQ*LICMDVHGSS*K 301
Score = 40.9 bits (83), Expect = 0.067
Identities = 23/53 (43%), Positives = 26/53 (49%)
Frame = +1 / +3
Query: 1834 FLFSLVEXXXXXXXXGKNACVGSSQRASSPKLSTAAMHVHAN*LLHVVFFISF 1992
F+ SLVE GK ACVGSS ASSPKL ++ FISF
Sbjct: 207 FVHSLVEIK*I*TAMGKIACVGSSHHASSPKLFNCCHARPCKLIIACCIFISF 365
Score = 33.1 bits (66), Expect(4) = 2e-051
Identities = 12/13 (92%), Positives = 13/13 (100%)
Frame = +1 / +1
Query: 1810 RLNFCIFEFLFSL 1848
RLNFCIFEFLF+L
Sbjct: 181 RLNFCIFEFLFTL 219
Score = 28.1 bits (55), Expect(3) = 1e-039
Identities = 11/12 (91%), Positives = 11/12 (91%)
Frame = +2 / +2
Query: 1811 D*TFAYLSFCSL 1846
D TFAYLSFCSL
Sbjct: 182 DSTFAYLSFCSL 217
Score = 26.3 bits (51), Expect(4) = 5e-051
Identities = 10/13 (76%), Positives = 12/13 (92%)
Frame = -1 / -1
Query: 1848 QREQKLKYAKVQS 1810
+ EQKLKYAKV+S
Sbjct: 219 ESEQKLKYAKVES 181
Score = 25.4 bits (49), Expect(4) = 2e-026
Identities = 12/16 (75%), Positives = 13/16 (81%)
Frame = +3 / +3
Query: 1800 LLYTTELLHI*VFVLS 1847
L TT+LLHI*VFV S
Sbjct: 171 LYTTTQLLHI*VFVHS 218
Score = 23.5 bits (45), Expect(4) = 2e-026
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +2 / +3
Query: 1772 FLSLEN*CF 1798
FLSLEN*CF
Sbjct: 141 FLSLEN*CF 167
>gb|CD214131.1|CD214131 HS1_70_D11.g1_A012 Heat-shocked seedlings Sorghum bicolor cDNA
clone HS1_70_D11_A012 5', mRNA sequence
Length = 593
Score = 204 bits (440), Expect = 4e-051
Identities = 78/116 (67%), Positives = 94/116 (81%)
Frame = +3 / +1
Query: 258 MGRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINY 437
MGR CC K L+KG W+PEED+ L+NHI GH W ++PK AGL RCGKSCRLRWINY
Sbjct: 193 MGRAPCCEKMGLKKGPWTPEEDKILVNHIQSFGHSNWRALPKQAGLLRCGKSCRLRWINY 372
Query: 438 LRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKL 605
LRPD+KRG F+++EED II LH LGNRWS IAA+LPGRTDNEIKN+W++ +KK+L
Sbjct: 373 LRPDIKRGNFSKEEEDAIITLHEQLGNRWSAIAARLPGRTDNEIKNVWHTHLKKRL 540
Score = 115 bits (245), Expect = 3e-024
Identities = 55/123 (44%), Positives = 76/123 (61%)
Frame = -2 / -3
Query: 605 QLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECPSLEVWPQIVYP 426
Q LL+ RVP +LDL++ PP Q + PPV E V+ DD V F+L E +L+V Q+V P
Sbjct: 540 QPLLEVRVPDVLDLVVRPPGQPGGDRGPPVAELLVEGDDGVLFLLAEVAALDVRAQVVDP 361
Query: 425 PQPTTLSAPLKPSEFGNRAPAAMAMLCYVIHEFLILLRGPEPLSQLLLVAARMPPHLNAM 246
P+P L+AP +P G RAP A+A V+ + L+LL P PL + L+AAR PPH +
Sbjct: 360 PEPAALAAPQQPGLLGQRAPVAVAEALDVVDQDLVLLGRPWPLLEPHLLAARSPPHYLVL 181
Query: 245 QNL 237
+L
Sbjct: 180 LDL 172
Score = 76.2 bits (160), Expect = 2e-012
Identities = 42/84 (50%), Positives = 44/84 (52%)
Frame = -3 / -1
Query: 604 SFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANAPLLRSGLR*FIH 425
S FL FLISLSV PGS AAI DHL P + S P L SG R* IH
Sbjct: 539 SRFLRCVCQTFLISLSVRPGSLAAIADHLLPSCSWRVMMASSSSLLKLPRLMSGRR*LIH 360
Query: 424 LSLQLFPHL*SPASLGTELQQPWP 353
S QL PH SPA LG+ Q WP
Sbjct: 359 RSRQLLPHRSSPACLGSARQLLWP 288
>gb|CF429105.1|CF429105 PH1_19_F05.g1_A002 Phosphorous-deficient seedlings Sorghum bicolor
cDNA clone PH1_19_F05_A002 5', mRNA sequence
Length = 628
Score = 204 bits (440), Expect = 4e-051
Identities = 78/116 (67%), Positives = 94/116 (81%)
Frame = +3 / +1
Query: 258 MGRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINY 437
MGR CC K L+KG W+PEED+ L+NHI GH W ++PK AGL RCGKSCRLRWINY
Sbjct: 205 MGRAPCCEKMGLKKGPWTPEEDKILVNHIQSFGHSNWRALPKQAGLLRCGKSCRLRWINY 384
Query: 438 LRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKL 605
LRPD+KRG F+++EED II LH LGNRWS IAA+LPGRTDNEIKN+W++ +KK+L
Sbjct: 385 LRPDIKRGNFSKEEEDAIITLHEQLGNRWSAIAARLPGRTDNEIKNVWHTHLKKRL 552
Score = 115 bits (245), Expect = 3e-024
Identities = 55/123 (44%), Positives = 76/123 (61%)
Frame = -2 / -2
Query: 605 QLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECPSLEVWPQIVYP 426
Q LL+ RVP +LDL++ PP Q + PPV E V+ DD V F+L E +L+V Q+V P
Sbjct: 552 QPLLEVRVPDVLDLVVRPPGQPGGDRGPPVAELLVEGDDGVLFLLAEVAALDVRAQVVDP 373
Query: 425 PQPTTLSAPLKPSEFGNRAPAAMAMLCYVIHEFLILLRGPEPLSQLLLVAARMPPHLNAM 246
P+P L+AP +P G RAP A+A V+ + L+LL P PL + L+AAR PPH +
Sbjct: 372 PEPAALAAPQQPGLLGQRAPVAVAEALDVVDQDLVLLGRPWPLLEPHLLAARSPPHYLVL 193
Query: 245 QNL 237
+L
Sbjct: 192 LDL 184
Score = 76.2 bits (160), Expect = 2e-012
Identities = 42/84 (50%), Positives = 44/84 (52%)
Frame = -3 / -3
Query: 604 SFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANAPLLRSGLR*FIH 425
S FL FLISLSV PGS AAI DHL P + S P L SG R* IH
Sbjct: 551 SRFLRCVCQTFLISLSVRPGSLAAIADHLLPSCSWRVMMASSSSLLKLPRLMSGRR*LIH 372
Query: 424 LSLQLFPHL*SPASLGTELQQPWP 353
S QL PH SPA LG+ Q WP
Sbjct: 371 RSRQLLPHRSSPACLGSARQLLWP 300
>gb|CN149909.1|CN149909 WOUND1_65_D11.g1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_65_D11_A002 5', mRNA sequence
Length = 767
Score = 204 bits (440), Expect = 4e-051
Identities = 78/116 (67%), Positives = 94/116 (81%)
Frame = +3 / +1
Query: 258 MGRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINY 437
MGR CC K L+KG W+PEED+ L+NHI GH W ++PK AGL RCGKSCRLRWINY
Sbjct: 193 MGRAPCCEKMGLKKGPWTPEEDKILVNHIQSFGHSNWRALPKQAGLLRCGKSCRLRWINY 372
Query: 438 LRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKL 605
LRPD+KRG F+++EED II LH LGNRWS IAA+LPGRTDNEIKN+W++ +KK+L
Sbjct: 373 LRPDIKRGNFSKEEEDAIITLHEQLGNRWSAIAARLPGRTDNEIKNVWDTHLKKRL 540
Score = 115 bits (245), Expect = 3e-024
Identities = 55/123 (44%), Positives = 76/123 (61%)
Frame = -2 / -3
Query: 605 QLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECPSLEVWPQIVYP 426
Q LL+ RVP +LDL++ PP Q + PPV E V+ DD V F+L E +L+V Q+V P
Sbjct: 540 QPLLEVRVPDVLDLVVRPPGQPGGDRGPPVAELLVEGDDGVLFLLAEVAALDVRAQVVDP 361
Query: 425 PQPTTLSAPLKPSEFGNRAPAAMAMLCYVIHEFLILLRGPEPLSQLLLVAARMPPHLNAM 246
P+P L+AP +P G RAP A+A V+ + L+LL P PL + L+AAR PPH +
Sbjct: 360 PEPAALAAPQQPGLLGQRAPVAVAEALDVVDQDLVLLGRPWPLLEPHLLAARSPPHYLVL 181
Query: 245 QNL 237
+L
Sbjct: 180 LDL 172
Score = 76.2 bits (160), Expect = 2e-012
Identities = 42/84 (50%), Positives = 44/84 (52%)
Frame = -3 / -1
Query: 604 SFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANAPLLRSGLR*FIH 425
S FL FLISLSV PGS AAI DHL P + S P L SG R* IH
Sbjct: 539 SRFLRCVSQTFLISLSVRPGSLAAIADHLLPSCSWRVMMASSSSLLKLPRLMSGRR*LIH 360
Query: 424 LSLQLFPHL*SPASLGTELQQPWP 353
S QL PH SPA LG+ Q WP
Sbjct: 359 RSRQLLPHRSSPACLGSARQLLWP 288
>gb|AF474133.1| Sorghum bicolor typical P-type R2R3 Myb protein (Myb67) gene, partial
cds
Length = 2224
Score = 160 bits (343), Expect(2) = 7e-051
Identities = 63/88 (71%), Positives = 73/88 (82%)
Frame = +3 / +1
Query: 390 GLQRCGKSCRLRWINYLRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEI 569
GL RCGKSCRLRW NYLRPD+KRG + +EE +I+LH LGNRWS+IA+QLPGRTDNEI
Sbjct: 1744 GLLRCGKSCRLRWTNYLRPDVKRGLLSSEEERTVIDLHEQLGNRWSKIASQLPGRTDNEI 1923
Query: 570 KNLWNSCIKKKLRQKGIDPNTHKPLTEA 653
KN WN+ IKKKLR+ GI P THKPL +A
Sbjct: 1924 KNHWNTHIKKKLRKMGIYPVTHKPLHQA 2007
Score = 104 bits (222), Expect(3) = 8e-028
Identities = 50/84 (59%), Positives = 53/84 (63%)
Frame = -3 / -3
Query: 640 GLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANA 461
GLWV G MP LSFFLM F FLISLSVLPGSC AI DH FP +C S +
Sbjct: 1994 GLWVTG*MPIFLSFFLMCVFQWFLISLSVLPGSCDAILDHRFPSCSCRSITVLSSSDDSR 1815
Query: 460 PLLRSGLR*FIHLSLQLFPHL*SP 389
P L SG R* +H SLQLFPH SP
Sbjct: 1814 PRLTSGRR*LVHRSLQLFPHRSSP 1743
Score = 97.3 bits (206), Expect(2) = 7e-020
Identities = 42/84 (50%), Positives = 58/84 (69%)
Frame = -2 / -2
Query: 650 LSKWLVGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVL 471
L + LVG G++A LP+LLLD RVP +LDL++ PP QLR +L PPVP+ VQ+D +
Sbjct: 2004 LMEGLVGNGVDAHLPELLLDVRVPVVLDLVVRPPRQLRRDLGPPVPQLLVQVDHRPLLLR 1825
Query: 470 GECPSLEVWPQIVYPPQPTTLSAP 399
+ +L+V P++V PPQP L AP
Sbjct: 1824 RQQAALDVRPEVVGPPQPAALPAP 1753
Score = 69.3 bits (145), Expect(2) = 7e-051
Identities = 25/45 (55%), Positives = 32/45 (71%)
Frame = +3 / +2
Query: 258 MGRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAG 392
MGR CC K L+KG W+ EED+KL+ + +GH CW +VPKLAG
Sbjct: 1478 MGRQPCCDKVGLKKGPWTAEEDQKLVTFLLANGHCCWRAVPKLAG 1612
Score = 48.7 bits (100), Expect(2) = 1e-008
Identities = 22/35 (62%), Positives = 24/35 (68%)
Frame = +1 / +2
Query: 535 QRSCQGGLIMRSRIYGTRASRRS*GRKALIPTPTS 639
+RSC+GG RSR GTR SRRS GR A P PTS
Sbjct: 1889 RRSCRGGRTTRSRTTGTRTSRRSSGRWASTPLPTS 1993
Score = 42.3 bits (86), Expect(2) = 7e-004
Identities = 21/42 (50%), Positives = 27/42 (64%)
Frame = +2 / +3
Query: 515 EQVVSNCSAAARED***DQESMELVHQEEAEAERH*SQHPQA 640
E VV + AAA ED DQE +E HQEEA+ + H ++PQA
Sbjct: 1869 EPVVQDRVAAAGEDGQRDQEPLEHAHQEEAQEDGHLPRYPQA 1994
Score = 41.4 bits (84), Expect(3) = 8e-028
Identities = 18/28 (64%), Positives = 21/28 (75%)
Frame = -2 / -1
Query: 332 EFLILLRGPEPLSQLLLVAARMPPHLNA 249
E L+LLR P PL Q LVAAR+PPH +A
Sbjct: 1552 ELLVLLRRPWPLFQPHLVAARLPPHCSA 1469
Score = 38.6 bits (78), Expect(2) = 1e-008
Identities = 22/46 (47%), Positives = 27/46 (58%)
Frame = +1 / +3
Query: 250 ALRWGGILAATSRS*ERGSGPLRRMRNS*IT*QSMAMAAGALFPNS 387
A +WGG AAT *+RG G RR R+S + A AAGA P+S
Sbjct: 1470 AEQWGGNRAATRWG*KRGHGRRRRTRSSSPSSSPTATAAGAPCPSS 1607
Score = 28.6 bits (56), Expect(2) = 7e-004
Identities = 17/44 (38%), Positives = 22/44 (50%)
Frame = +2 / +1
Query: 257 DGEAFLLLQAEAEKGALVP*GG*ETHESHNKAWPWLLELCSQTR 388
+GEA +L Q EKGA+ GG E + P LL +Q R
Sbjct: 1477 NGEATVLRQGGVEKGAMDGGGGPEARHLPPRQRPLLLARRAQAR 1608
Score = 28.1 bits (55), Expect(2) = 7e-020
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = -1 / -3
Query: 327 SHPPQGTRAPFSASACSSKNASP 259
S PP + APFS C S ASP
Sbjct: 1547 SGPPPPSMAPFSTPPCRSTVASP 1479
Score = 28.1 bits (55), Expect(3) = 8e-028
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = -3 / -2
Query: 394 SPASLGTELQQPWP 353
+PASLGT QQ WP
Sbjct: 1614 APASLGTARQQQWP 1573
>gb|AW563849.1|AW563849 LG1_272_G12.b1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 526
Score = 202 bits (436), Expect = 1e-050
Identities = 77/115 (66%), Positives = 93/115 (80%)
Frame = +3 / +3
Query: 258 MGRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINY 437
MGR CC K L+KG W+PEED+ L+NHI GH W ++PK AGL RCGKSCRLRWINY
Sbjct: 180 MGRAPCCEKMGLKKGPWTPEEDKILVNHIQSFGHSNWRALPKQAGLLRCGKSCRLRWINY 359
Query: 438 LRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKK 602
LRPD+KRG F+++EED II LH LGNRWS IAA+LPGRTDNEIKN+W++ +KK+
Sbjct: 360 LRPDIKRGNFSKEEEDAIITLHEQLGNRWSAIAARLPGRTDNEIKNVWHTHLKKR 524
Score = 114 bits (243), Expect = 6e-024
Identities = 54/121 (44%), Positives = 75/121 (61%)
Frame = -2 / -3
Query: 599 LLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECPSLEVWPQIVYPPQ 420
LL+ RVP +LDL++ PP Q + PPV E V+ DD V F+L E +L+V Q+V PP+
Sbjct: 521 LLEVRVPDVLDLVVRPPGQPGGDRGPPVAELLVEGDDGVLFLLAEVAALDVRAQVVDPPE 342
Query: 419 PTTLSAPLKPSEFGNRAPAAMAMLCYVIHEFLILLRGPEPLSQLLLVAARMPPHLNAMQN 240
P L+AP +P G RAP A+A V+ + L+LL P PL + L+AAR PPH + +
Sbjct: 341 PAALAAPQQPGLLGQRAPVAVAEALDVVDQDLVLLGRPWPLLEPHLLAARSPPHYLVLLD 162
Query: 239 L 237
L
Sbjct: 161 L 159
Score = 76.2 bits (160), Expect = 2e-012
Identities = 42/84 (50%), Positives = 44/84 (52%)
Frame = -3 / -1
Query: 604 SFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANAPLLRSGLR*FIH 425
S FL FLISLSV PGS AAI DHL P + S P L SG R* IH
Sbjct: 526 SRFLRCVCQTFLISLSVRPGSLAAIADHLLPSCSWRVMMASSSSLLKLPRLMSGRR*LIH 347
Query: 424 LSLQLFPHL*SPASLGTELQQPWP 353
S QL PH SPA LG+ Q WP
Sbjct: 346 RSRQLLPHRSSPACLGSARQLLWP 275
>gb|CX610466.1|CX610466 ANR1_18_H10.g1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_18_H10_A002 5', mRNA sequence
Length = 671
Score = 202 bits (436), Expect = 1e-050
Identities = 78/110 (70%), Positives = 91/110 (82%)
Frame = +3 / +2
Query: 282 KQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRG 461
K RKGLWSPEED++L ++I KHG GCWS+VP AGLQR GKSCRLRWINYLRP LKRG
Sbjct: 104 KMNYRKGLWSPEEDQRLRDYILKHGLGCWSAVPAKAGLQRNGKSCRLRWINYLRPGLKRG 283
Query: 462 AFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQ 611
F+Q+EED+II L A LGN+WSQIA LPGRTDNE+KN WNS +KK++ Q
Sbjct: 284 MFSQEEEDVIINLQAKLGNKWSQIAMHLPGRTDNEVKNYWNSYLKKRVMQ 433
Score = 94.5 bits (200), Expect = 5e-018
Identities = 46/101 (45%), Positives = 64/101 (63%)
Frame = -2 / -2
Query: 599 LLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECPSLEVWPQIVYPPQ 420
LL RVP +L L++ P Q+ NLRP V + +++DD+VF +L E +L+ PQ+V P Q
Sbjct: 421 LLQVRVPVVLHLVVCPSRQMHRNLRPLVAQLGLEVDDDVFLLLREHSALQPGPQVVDPTQ 242
Query: 419 PTTLSAPLKPSEFGNRAPAAMAMLCYVIHEFLILLRGPEPL 297
T L+ L+ S N PAA AML V+ E L+LLR P+PL
Sbjct: 241 TTALAISLETSLCRNSTPAAEAMLEDVVPEPLVLLRRPQPL 119
Score = 84.9 bits (179), Expect = 4e-015
Identities = 42/90 (46%), Positives = 46/90 (51%)
Frame = -3 / -3
Query: 610 CLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANAPLLRSGLR*F 431
C++ F +EF F SLSVLPG C AI*DHL P A S N P G +*
Sbjct: 432 CITLFFRYEFQ*FFTSLSVLPGRCIAI*DHLLPSLAWRLMMTSSSS*ENIPRFNPGRK*L 253
Query: 430 IHLSLQLFPHL*SPASLGTELQQPWPCFVM 341
I QL P L PA GT LQQP PC M
Sbjct: 252 IQRRRQLLPFLWRPAFAGTALQQPRPCLRM 163
Score = 49.2 bits (101), Expect(2) = 9e-009
Identities = 23/52 (44%), Positives = 32/52 (61%)
Frame = +2 / +1
Query: 281 QAEAEKGALVP*GG*ETHESHNKAWPWLLELCSQTRWASKVRKEL*AEVDKL 436
Q E +GA+V *GG E H +AWP LLE CS W+ + +EL + +D+L
Sbjct: 103 QDELPEGAVVS*GGPEAQGLHPQAWPRLLECCSCKGWSPEKWQELSSALDQL 258
Score = 41.8 bits (85), Expect = 0.036
Identities = 20/40 (50%), Positives = 25/40 (62%)
Frame = -1 / -1
Query: 390 QRVWEQSSSSHGHALLCDS*VSHPPQGTRAPFSASACSSK 271
Q + EQ SSS GHA C * S PPQ T AP +S+ +S+
Sbjct: 212 QPLQEQHSSSRGHA*GCSP*ASGPPQETTAPSGSSSWASR 93
Score = 34.5 bits (69), Expect = 5.7
Identities = 20/40 (50%), Positives = 21/40 (52%)
Frame = +1 / +3
Query: 298 RGSGPLRRMRNS*IT*QSMAMAAGALFPNSLGFKGAERVV 417
RG G LRR R S T SMA AAG LF L + R V
Sbjct: 120 RGCGLLRRTRGSGTTSSSMASAAGVLFLQRLVSREMARAV 239
Score = 33.1 bits (66), Expect(2) = 9e-009
Identities = 15/32 (46%), Positives = 23/32 (71%)
Frame = +2 / +1
Query: 515 EQVVSNCSAAARED***DQESMELVHQEEAEA 610
+QVVS+C A+A +D +E +ELV +EE +A
Sbjct: 337 QQVVSDCDASAGKDRQRGEELLELVPEEEGDA 432
>gb|CW317106.1|CW317106 104_808_11473239_116_35853_052 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11473239, DNA
sequence
Length = 633
Score = 155 bits (332), Expect(2) = 1e-050
Identities = 60/82 (73%), Positives = 69/82 (84%)
Frame = +3 / -2
Query: 390 GLQRCGKSCRLRWINYLRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEI 569
GL RCGKSCRLRW NYLRPD+KRG + +EE +I+LH LGNRWS+IA+QLPGRTDNEI
Sbjct: 248 GLLRCGKSCRLRWTNYLRPDVKRGLLSSEEERTVIDLHEQLGNRWSKIASQLPGRTDNEI 69
Query: 570 KNLWNSCIKKKLRQKGIDPNTH 635
KN WN+ IKKKLR+ GIDP TH
Sbjct: 68 KNHWNTHIKKKLRKMGIDPVTH 3
Score = 105 bits (224), Expect(3) = 3e-027
Identities = 50/83 (60%), Positives = 53/83 (63%)
Frame = -3 / +1
Query: 637 LWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANAP 458
LWV GSMP LSFFLM F FLISLSVLPGSC AI DH FP +C S + P
Sbjct: 1 LWVTGSMPIFLSFFLMCVFQWFLISLSVLPGSCDAILDHRFPSCSCRSITVLSSSDDSRP 180
Query: 457 LLRSGLR*FIHLSLQLFPHL*SP 389
L SG R* +H SLQLFPH SP
Sbjct: 181 RLTSGRR*LVHRSLQLFPHRSSP 249
Score = 94.5 bits (200), Expect = 5e-018
Identities = 40/79 (50%), Positives = 55/79 (69%)
Frame = -2 / +3
Query: 635 VGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECPS 456
VG G++A LP+LLLD RVP +LDL++ PP QLR +L PPVP+ VQ+D + + +
Sbjct: 3 VGDGVDAHLPELLLDVRVPVVLDLVVRPPRQLRRDLGPPVPQLLVQVDHRPLLLRRQQAA 182
Query: 455 LEVWPQIVYPPQPTTLSAP 399
L+V P++V PPQP L AP
Sbjct: 183 LDVRPEVVGPPQPAALPAP 239
Score = 68.0 bits (142), Expect(2) = 1e-050
Identities = 24/45 (53%), Positives = 32/45 (71%)
Frame = +3 / -1
Query: 258 MGRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAG 392
MGR CC K L++G W+ EED+KL+ + +GH CW +VPKLAG
Sbjct: 477 MGRQPCCAKVGLKRGPWTVEEDQKLVTFLLTNGHCCWRAVPKLAG 343
Score = 47.8 bits (98), Expect(2) = 4e-006
Identities = 21/34 (61%), Positives = 24/34 (70%)
Frame = +1 / -3
Query: 535 QRSCQGGLIMRSRIYGTRASRRS*GRKALIPTPT 636
+RSC+GG RSR GTR SRRS GR A P+PT
Sbjct: 103 RRSCRGGRTTRSRTTGTRTSRRSSGRWASTPSPT 2
Score = 43.2 bits (88), Expect = 0.014
Identities = 21/41 (51%), Positives = 26/41 (63%)
Frame = +2 / -1
Query: 515 EQVVSNCSAAARED***DQESMELVHQEEAEAERH*SQHPQ 637
E VV + AAA ED DQE +E HQEEA+ + H +HPQ
Sbjct: 123 EPVVQDRVAAAGEDGQRDQEPLEHAHQEEAQEDGHRPRHPQ 1
Score = 29.0 bits (57), Expect(3) = 3e-027
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = -2 / +1
Query: 332 EFLILLRGPEPLSQLLLVAARMPPH 258
E L+LL P Q L AAR+PPH
Sbjct: 403 ELLVLLHRPRAPLQPHLSAARLPPH 477
Score = 29.0 bits (57), Expect(2) = 4e-006
Identities = 18/44 (40%), Positives = 22/44 (50%)
Frame = +1 / -2
Query: 256 RWGGILAATSRS*ERGSGPLRRMRNS*IT*QSMAMAAGALFPNS 387
+WGG AA * G RR R+S + A AAGA P+S
Sbjct: 479 QWGGNRAALRWG*RGARGRWRRTRSSSPSSSPTATAAGAPCPSS 348
Score = 28.1 bits (55), Expect(3) = 3e-027
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = -3 / +2
Query: 394 SPASLGTELQQPWP 353
+PASLGT QQ WP
Sbjct: 341 APASLGTARQQQWP 382
>gb|CW212940.1|CW212940 104_644_11191287_116_37030_060 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11191287, DNA
sequence
Length = 618
Score = 159 bits (341), Expect(2) = 2e-050
Identities = 62/85 (72%), Positives = 70/85 (82%)
Frame = +3 / -2
Query: 384 LAGLQRCGKSCRLRWINYLRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDN 563
+AGLQRCGKSCRLRW NYLRPDLK G F EE II+LH+V+GNRWS IAAQLPGRTDN
Sbjct: 344 MAGLQRCGKSCRLRWTNYLRPDLKHGEFTDAEEQTIIKLHSVVGNRWSVIAAQLPGRTDN 165
Query: 564 EIKNLWNSCIKKKLRQKGIDPNTHK 638
++KN WN+ +KKKL GIDP THK
Sbjct: 164 DVKNHWNTKLKKKLSGMGIDPVTHK 90
Score = 95.0 bits (201), Expect(2) = 2e-023
Identities = 46/84 (54%), Positives = 50/84 (59%)
Frame = -3 / +1
Query: 637 LWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANAP 458
L V GSMP SFF F FL SLSV PGSCAAI DHL P T C + N+P
Sbjct: 91 LCVTGSMPIPDSFFFSLVFQWFLTSLSVRPGSCAAITDHLLPTTECSLMMVCSSASVNSP 270
Query: 457 LLRSGLR*FIHLSLQLFPHL*SPA 386
LRSG R* +H S QLFPH +PA
Sbjct: 271 CLRSGRR*LVHRSRQLFPHRCNPA 342
Score = 90.0 bits (190), Expect = 1e-016
Identities = 41/82 (50%), Positives = 54/82 (65%)
Frame = -2 / +3
Query: 638 LVGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECP 459
LV G++A QLLL VP +LD+++ PP QLR + RPPV +D VQLDD + + E
Sbjct: 90 LVRDGVDAHPGQLLLQLGVPVVLDVVVRPPRQLRRDHRPPVADDGVQLDDGLLLGVRELA 269
Query: 458 SLEVWPQIVYPPQPTTLSAPLK 393
LEV PQ+V PP+P L APL+
Sbjct: 270 VLEVRPQVVGPPEPAALPAPLQ 335
Score = 63.4 bits (132), Expect(2) = 2e-050
Identities = 22/45 (48%), Positives = 32/45 (71%)
Frame = +3 / -3
Query: 258 MGRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAG 392
MGR CC K +++G W+PEED KL+++IT++G W +PK AG
Sbjct: 577 MGRIPCCEKDSVKRGQWTPEEDNKLLSYITQYGTRNWRLIPKNAG 443
Score = 37.3 bits (75), Expect(2) = 2e-023
Identities = 17/41 (41%), Positives = 24/41 (58%)
Frame = -2 / +2
Query: 380 GNRAPAAMAMLCYVIHEFLILLRGPEPLSQLLLVAARMPPH 258
G+ AP A+L V + ++LL P P +L+AAR PPH
Sbjct: 455 GDEAPVTRAVLGDVGEQLVVLLGRPLPALDAVLLAARDPPH 577
Score = 29.5 bits (58), Expect(2) = 0.95
Identities = 16/35 (45%), Positives = 20/35 (57%)
Frame = +1 / -3
Query: 535 QRSCQGGLIMRSRIYGTRASRRS*GRKALIPTPTS 639
+RSC+GG SR GT + RRS A P+ TS
Sbjct: 193 RRSCRGGRTTTSRTTGTPS*RRSCPGWASTPSRTS 89
Score = 28.6 bits (56), Expect(2) = 0.95
Identities = 17/42 (40%), Positives = 19/42 (45%)
Frame = +1 / -1
Query: 256 RWGGILAATSRS*ERGSGPLRRMRNS*IT*QSMAMAAGALFP 381
RWGG AA + GSG RR + T S A GA P
Sbjct: 579 RWGGSRAARRTASSAGSGRPRRTTSCSPTSPSTARVTGASSP 454
>gb|AF474130.1| Sorghum bicolor typical P-type R2R3 Myb protein (Myb53) gene, partial
cds
Length = 1892
Score = 158 bits (339), Expect(2) = 2e-050
Identities = 62/85 (72%), Positives = 71/85 (83%)
Frame = +3 / +1
Query: 390 GLQRCGKSCRLRWINYLRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEI 569
GL RCGKSCRLRW NYLRPD+KRG + +EE +I+LH LGNRWS+IA+QLPGRTDNEI
Sbjct: 1471 GLLRCGKSCRLRWTNYLRPDVKRGLLSSEEERTVIDLHEQLGNRWSKIASQLPGRTDNEI 1650
Query: 570 KNLWNSCIKKKLRQKGIDPNTHKPL 644
KN WN+ IKKKLR+ GI P THKPL
Sbjct: 1651 KNHWNTHIKKKLRKMGIYPVTHKPL 1725
Score = 104 bits (222), Expect(3) = 1e-030
Identities = 50/84 (59%), Positives = 53/84 (63%)
Frame = -3 / -1
Query: 640 GLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANA 461
GLWV G MP LSFFLM F FLISLSVLPGSC AI DH FP +C S +
Sbjct: 1721 GLWVTG*MPIFLSFFLMCVFQWFLISLSVLPGSCDAILDHRFPSCSCRSITVLSSSDDSR 1542
Query: 460 PLLRSGLR*FIHLSLQLFPHL*SP 389
P L SG R* +H SLQLFPH SP
Sbjct: 1541 PRLTSGRR*LVHRSLQLFPHRSSP 1470
Score = 97.3 bits (206), Expect(2) = 7e-019
Identities = 42/84 (50%), Positives = 58/84 (69%)
Frame = -2 / -3
Query: 650 LSKWLVGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVL 471
L + LVG G++A LP+LLLD RVP +LDL++ PP QLR +L PPVP+ VQ+D +
Sbjct: 1731 LMEGLVGDGVDAHLPELLLDVRVPVVLDLVVRPPRQLRRDLGPPVPQLLVQVDHRPLLLR 1552
Query: 470 GECPSLEVWPQIVYPPQPTTLSAP 399
+ +L+V P++V PPQP L AP
Sbjct: 1551 RQQAALDVRPEVVGPPQPAALPAP 1480
Score = 69.3 bits (145), Expect(2) = 2e-050
Identities = 25/45 (55%), Positives = 32/45 (71%)
Frame = +3 / +2
Query: 258 MGRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAG 392
MGR CC K L+KG W+ EED+KL+ + +GH CW +VPKLAG
Sbjct: 1205 MGRQPCCDKVGLKKGPWTAEEDQKLVTFLLANGHCCWRAVPKLAG 1339
Score = 49.6 bits (102), Expect(2) = 7e-009
Identities = 22/35 (62%), Positives = 25/35 (71%)
Frame = +1 / +2
Query: 535 QRSCQGGLIMRSRIYGTRASRRS*GRKALIPTPTS 639
+RSC+GG RSR GTR SRRS GR A P+PTS
Sbjct: 1616 RRSCRGGRTTRSRTTGTRTSRRSSGRWASTPSPTS 1720
Score = 45.1 bits (92), Expect = 0.004
Identities = 22/42 (52%), Positives = 27/42 (64%)
Frame = +2 / +3
Query: 515 EQVVSNCSAAARED***DQESMELVHQEEAEAERH*SQHPQA 640
E VV + AAA ED DQE +E HQEEA+ + H +HPQA
Sbjct: 1596 EPVVQDRVAAAGEDGQRDQEPLEHAHQEEAQEDGHLPRHPQA 1721
Score = 41.4 bits (84), Expect(3) = 1e-030
Identities = 18/28 (64%), Positives = 21/28 (75%)
Frame = -2 / -2
Query: 332 EFLILLRGPEPLSQLLLVAARMPPHLNA 249
E L+LLR P PL Q LVAAR+PPH +A
Sbjct: 1279 ELLVLLRRPWPLLQPHLVAARLPPHCSA 1196
Score = 38.2 bits (77), Expect(2) = 7e-009
Identities = 22/46 (47%), Positives = 26/46 (56%)
Frame = +1 / +3
Query: 250 ALRWGGILAATSRS*ERGSGPLRRMRNS*IT*QSMAMAAGALFPNS 387
A +WGG AAT * RG G RR R+S + A AAGA P+S
Sbjct: 1197 AEQWGGNRAATRWG*RRGHGRRRRTRSSSPSSSPTATAAGAPCPSS 1334
Score = 28.1 bits (55), Expect(3) = 1e-030
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = -3 / -3
Query: 394 SPASLGTELQQPWP 353
+PASLGT QQ WP
Sbjct: 1341 APASLGTARQQQWP 1300
Score = 24.4 bits (47), Expect(2) = 7e-019
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = -1 / -1
Query: 327 SHPPQGTRAPFSASACSSKNASP 259
S PP + AP S C S ASP
Sbjct: 1274 SGPPPPSMAPSSTPPCRSTVASP 1206
>gb|CD224966.1|CD224966 CCC1_37_B09.g1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_37_B09_A007 5', mRNA sequence
Length = 592
Score = 201 bits (434), Expect = 3e-050
Identities = 77/116 (66%), Positives = 93/116 (80%)
Frame = +3 / +3
Query: 258 MGRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINY 437
MGR CC K L+KG W+PEED+ L+NHI GH W ++PK AGL RCGKSCRLRWINY
Sbjct: 195 MGRAPCCEKMGLKKGPWTPEEDKILVNHIQSFGHSNWRALPKQAGLLRCGKSCRLRWINY 374
Query: 438 LRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKL 605
LRPD+KRG F+++EED II LH LGNRWS IAA+LPGRTDNEIKN+W++ + K+L
Sbjct: 375 LRPDIKRGNFSKEEEDAIITLHEQLGNRWSAIAARLPGRTDNEIKNVWHTHLXKRL 542
Score = 112 bits (240), Expect = 1e-023
Identities = 54/123 (43%), Positives = 75/123 (60%)
Frame = -2 / -3
Query: 605 QLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECPSLEVWPQIVYP 426
Q L + RVP +LDL++ PP Q + PPV E V+ DD V F+L E +L+V Q+V P
Sbjct: 542 QPLXEVRVPDVLDLVVRPPGQPGGDRGPPVAELLVEGDDGVLFLLAEVAALDVRAQVVDP 363
Query: 425 PQPTTLSAPLKPSEFGNRAPAAMAMLCYVIHEFLILLRGPEPLSQLLLVAARMPPHLNAM 246
P+P L+AP +P G RAP A+A V+ + L+LL P PL + L+AAR PPH +
Sbjct: 362 PEPAALAAPQQPGLLGQRAPVAVAEALDVVDQDLVLLGRPWPLLEPHLLAARSPPHYLVL 183
Query: 245 QNL 237
+L
Sbjct: 182 LDL 174
Score = 75.3 bits (158), Expect = 3e-012
Identities = 39/74 (52%), Positives = 41/74 (55%)
Frame = -3 / -1
Query: 574 FLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANAPLLRSGLR*FIHLSLQLFPHL* 395
FLISLSV PGS AAI DHL P + S P L SG R* IH S QL PH
Sbjct: 511 FLISLSVRPGSLAAIADHLLPSCSWRVMMASSSSLLKLPRLMSGRR*LIHRSRQLLPHRS 332
Query: 394 SPASLGTELQQPWP 353
SPA LG+ Q WP
Sbjct: 331 SPACLGSARQLLWP 290
>gb|CD429271.1|CD429271 ETH1_3_B10.g1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_3_B10_A002 5', mRNA sequence
Length = 564
Score = 201 bits (434), Expect = 3e-050
Identities = 74/114 (64%), Positives = 92/114 (80%)
Frame = +3 / +2
Query: 258 MGRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINY 437
MGR CC K KG W+ EED++L+ +I HG GCW S+PK AGL RCGKSCRLRWINY
Sbjct: 221 MGRSPCCEKAHTNKGAWTKEEDDRLVAYIKAHGEGCWRSLPKAAGLLRCGKSCRLRWINY 400
Query: 438 LRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKK 599
LRPDLKRG F ++E++LII+LH++LGN+WS IA +LPGRTDNEIKN WN+ I++
Sbjct: 401 LRPDLKRGNFTEEEDELIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTHIRR 562
Score = 102 bits (218), Expect = 2e-020
Identities = 47/112 (41%), Positives = 68/112 (60%)
Frame = -2 / -3
Query: 593 DARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECPSLEVWPQIVYPPQPT 414
D RVP +LDL++ P Q + P V E++V+LDDE+ + E +LEV ++V PP+
Sbjct: 556 DVRVPVVLDLVVRPSRQPSSDQGPFVAEEAVELDDELVLLFREVAALEVGAEVVDPPEAA 377
Query: 413 TLSAPLKPSEFGNRAPAAMAMLCYVIHEFLILLRGPEPLSQLLLVAARMPPH 258
L+A + G RAPA +A+ V HE ++LL GP L + L+AAR PPH
Sbjct: 376 ALAAAQEAGGLGQRAPATLAVRLDVRHEAVVLLLGPRALVGVRLLAARRPPH 221
Score = 86.3 bits (182), Expect = 1e-015
Identities = 45/87 (51%), Positives = 48/87 (55%)
Frame = -3 / -1
Query: 601 FFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANAPLLRSGLR*FIHL 422
F M F FLISLSVLPGS AI DHL PR S P LRSG R* IH
Sbjct: 564 FLRMCVFQ*FLISLSVLPGSLPAIRDHLLPRRLWSLMMSSSSSSVKLPRLRSGRR*LIHR 385
Query: 421 SLQLFPHL*SPASLGTELQQPWPCFVM 341
QL P PA+LG+E QQP PC +M
Sbjct: 384 RRQLLPQRRRPAALGSERQQPSPCALM 304
Score = 48.7 bits (100), Expect = 3e-004
Identities = 35/112 (31%), Positives = 38/112 (33%)
Frame = +1 / +3
Query: 259 WGGILAATSRS*ERGSGPLRRMRNS*IT*QSMAMAAGALFPNSLGFKGAERVVG*GG*TI 438
WGG AA R+ R GP RR S T + A AGA P A R GG T
Sbjct: 222 WGGRRAARRRTPTRARGPRRRTTASWRTSRRTARVAGARCPRPPASCAAARAAASGGSTT 401
Query: 439 *GQTSREGHSPXXXXXXXXXXXXXXXXXXXXXQRSCQGGLIMRSRIYGTRAS 594
TS S C+ G RSR GTR S
Sbjct: 402 SAPTSSAATSRKRRTSSSSSSTASSATNGP*SLEGCREGRTTRSRTTGTRTS 557
>gb|CW419529.1|CW419529 fsbb001f124g17k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f124g17, DNA
sequence
Length = 613
Score = 147 bits (315), Expect(2) = 4e-050
Identities = 58/76 (76%), Positives = 66/76 (86%)
Frame = +3 / -2
Query: 378 PKLAGLQRCGKSCRLRWINYLRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRT 557
P AGL RCGKSCRLRW NYLRPDLKRG +++EE L+I+LHA LGNRWS+IAA+LPGRT
Sbjct: 237 PHPAGLLRCGKSCRLRWTNYLRPDLKRGLLSEEEEALVIDLHAQLGNRWSKIAARLPGRT 58
Query: 558 DNEIKNLWNSCIKKKL 605
DNEIKN WN+ IKKKL
Sbjct: 57 DNEIKNHWNTHIKKKL 10
Score = 91.8 bits (194), Expect = 3e-017
Identities = 47/81 (58%), Positives = 50/81 (61%)
Frame = -3 / +2
Query: 607 LSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANAPLLRSGLR*FI 428
+SFFLM F FLISLSVLPGS AAI DH P A S PLLRSGLR* +
Sbjct: 8 VSFFLMWVFQWFLISLSVLPGSRAAILDHRLPSCAWRSMTSASSSSERRPLLRSGLR*LV 187
Query: 427 HLSLQLFPHL*SPASLGTELQ 365
H S QLFPHL SPA G + Q
Sbjct: 188 HRSRQLFPHLSSPAG*GRKRQ 250
Score = 83.1 bits (175), Expect(2) = 8e-024
Identities = 37/72 (51%), Positives = 48/72 (66%)
Frame = -2 / +1
Query: 605 QLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECPSLEVWPQIVYP 426
QLLLD VP +LDL++ PP + R +L PPV E V++DD+ +L E LEV PQ+V P
Sbjct: 10 QLLLDVGVPVVLDLVVRPPGEPRRDLGPPVAELRVEVDDQRLLLLREEAPLEVRPQVVGP 189
Query: 425 PQPTTLSAPLKP 390
PQP L AP +P
Sbjct: 190 PQPAALPAPQQP 225
Score = 74.4 bits (156), Expect(2) = 4e-050
Identities = 27/46 (58%), Positives = 32/46 (69%)
Frame = +3 / -3
Query: 255 EMGRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAG 392
EMGR CC K L+KG W+ EED+KL+ + HGH CW VPKLAG
Sbjct: 476 EMGRQPCCEKVGLKKGPWTAEEDQKLVTFLLSHGHCCWRLVPKLAG 339
Score = 50.1 bits (103), Expect(2) = 8e-024
Identities = 22/48 (45%), Positives = 31/48 (64%)
Frame = -2 / +3
Query: 395 KPSEFGNRAPAAMAMLCYVIHEFLILLRGPEPLSQLLLVAARMPPHLN 252
+ E G+ PAAMA+ + L+LLRGP PL + L+AAR+P HL+
Sbjct: 336 RTGELGDEPPAAMAVRQEEGDQLLVLLRGPRPLLETDLLAARLPAHLS 479
Score = 42.3 bits (86), Expect(2) = 8e-005
Identities = 26/69 (37%), Positives = 28/69 (40%)
Frame = +1 / -3
Query: 400 GAERVVG*GG*TI*GQTSREGHSPXXXXXXXXXXXXXXXXXXXXXQRSCQGGLIMRSRIY 579
GA R G GG T *G+TSR S +R GG RSR
Sbjct: 215 GAGRAAGCGGPTT*GRTSRGASSRRRRRRWSSTSTRSSATGGPRSRRGSPGGRTTRSRTT 36
Query: 580 GTRASRRS* 606
GT SRRS*
Sbjct: 35 GTPTSRRS* 9
Score = 29.9 bits (59), Expect(2) = 8e-005
Identities = 13/25 (52%), Positives = 14/25 (56%)
Frame = +1 / -1
Query: 256 RWGGILAATSRS*ERGSGPLRRMRN 330
RW G LAA RG GP RR R+
Sbjct: 475 RWAGSLAARRSVSRRGRGPRRRTRS 401
>gb|AF474126.1| Sorghum bicolor typical P-type R2R3 Myb protein (Myb12) gene, partial
cds
Length = 2020
Score = 158 bits (339), Expect(2) = 5e-050
Identities = 62/85 (72%), Positives = 70/85 (82%)
Frame = +3 / +3
Query: 384 LAGLQRCGKSCRLRWINYLRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDN 563
+AGLQRCGKSCRLRW NYLRPDLK G F EE II+LH+V+GNRWS IAAQLPGRTDN
Sbjct: 1650 MAGLQRCGKSCRLRWTNYLRPDLKHGEFTDAEEQTIIKLHSVVGNRWSVIAAQLPGRTDN 1829
Query: 564 EIKNLWNSCIKKKLRQKGIDPNTHK 638
++KN WN+ +KKKL GIDP THK
Sbjct: 1830 DVKNHWNTKLKKKLFGMGIDPVTHK 1904
Score = 95.5 bits (202), Expect(2) = 4e-024
Identities = 46/84 (54%), Positives = 50/84 (59%)
Frame = -3 / -1
Query: 637 LWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANAP 458
L V GSMP SFF F FL SLSV PGSCAAI DHL P T C + N+P
Sbjct: 1903 LCVTGSMPIPNSFFFSLVFQWFLTSLSVRPGSCAAITDHLLPTTECSLMMVCSSASVNSP 1724
Query: 457 LLRSGLR*FIHLSLQLFPHL*SPA 386
LRSG R* +H S QLFPH +PA
Sbjct: 1723 CLRSGRR*LVHRSRQLFPHRCNPA 1652
Score = 90.4 bits (191), Expect = 9e-017
Identities = 41/82 (50%), Positives = 54/82 (65%)
Frame = -2 / -3
Query: 638 LVGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECP 459
LV G++A QLLL VP +LD+++ PP QLR + RPPV +D VQLDD + + E
Sbjct: 1904 LVRDGVDAHPEQLLLQLGVPVVLDVVVRPPRQLRRDHRPPVADDGVQLDDGLLLGVRELA 1725
Query: 458 SLEVWPQIVYPPQPTTLSAPLK 393
LEV PQ+V PP+P L APL+
Sbjct: 1724 VLEVRPQVVGPPEPAALPAPLQ 1659
Score = 62.9 bits (131), Expect(2) = 5e-050
Identities = 22/45 (48%), Positives = 32/45 (71%)
Frame = +3 / +1
Query: 258 MGRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAG 392
MGR CC K +++G W+PEED KL+++IT++G W +PK AG
Sbjct: 1417 MGRIPCCEKDSVKRGPWTPEEDNKLLSYITQYGTRNWRLIPKNAG 1551
Score = 38.6 bits (78), Expect(2) = 4e-024
Identities = 17/41 (41%), Positives = 24/41 (58%)
Frame = -2 / -2
Query: 380 GNRAPAAMAMLCYVIHEFLILLRGPEPLSQLLLVAARMPPH 258
G+ AP A+L V + ++LL P P +L+AAR PPH
Sbjct: 1539 GDEAPVTRAVLGDVGEQLVVLLGRPRPALDAVLLAARDPPH 1417
>gb|CD429496.1|CD429496 ETH1_4_D02.g1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_4_D02_A002 5', mRNA sequence
Length = 551
Score = 199 bits (429), Expect = 1e-049
Identities = 76/113 (67%), Positives = 91/113 (80%)
Frame = +3 / +2
Query: 258 MGRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINY 437
MGR CC K L+KG W+PEED+ L+NHI GH W ++PK AGL RCGKSCRLRWINY
Sbjct: 212 MGRAPCCEKMGLKKGPWTPEEDKILVNHIQSFGHSNWRALPKQAGLLRCGKSCRLRWINY 391
Query: 438 LRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIK 596
LRPD+KRG F+++EED II LH LGNRWS IAA+LPGRTDNEIKN+W++ +K
Sbjct: 392 LRPDIKRGNFSKEEEDAIITLHEQLGNRWSAIAARLPGRTDNEIKNVWHTHLK 550
Score = 112 bits (239), Expect = 2e-023
Identities = 53/120 (44%), Positives = 74/120 (61%)
Frame = -2 / -2
Query: 596 LDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECPSLEVWPQIVYPPQP 417
L+ RVP +LDL++ PP Q + PPV E V+ DD V F+L E +L+V Q+V PP+P
Sbjct: 550 LEVRVPDVLDLVVRPPGQPGGDRGPPVAELLVEGDDGVLFLLAEVAALDVRAQVVDPPEP 371
Query: 416 TTLSAPLKPSEFGNRAPAAMAMLCYVIHEFLILLRGPEPLSQLLLVAARMPPHLNAMQNL 237
L+AP +P G RAP A+A V+ + L+LL P PL + L+AAR PPH + +L
Sbjct: 370 AALAAPQQPGLLGQRAPVAVAEALDVVDQDLVLLGRPWPLLEPHLLAARSPPHYLVLLDL 191
Score = 75.3 bits (158), Expect = 3e-012
Identities = 39/74 (52%), Positives = 41/74 (55%)
Frame = -3 / -3
Query: 574 FLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANAPLLRSGLR*FIHLSLQLFPHL* 395
FLISLSV PGS AAI DHL P + S P L SG R* IH S QL PH
Sbjct: 528 FLISLSVRPGSLAAIADHLLPSCSWRVMMASSSSLLKLPRLMSGRR*LIHRSRQLLPHRS 349
Query: 394 SPASLGTELQQPWP 353
SPA LG+ Q WP
Sbjct: 348 SPACLGSARQLLWP 307
>gb|AF470060.1| Sorghum bicolor P-type R2R3 Myb protein (Myb23) gene, partial cds
Length = 2028
Score = 156 bits (336), Expect(3) = 2e-049
Identities = 57/89 (64%), Positives = 70/89 (78%)
Frame = +3 / +1
Query: 258 MGRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINY 437
MGR CC K KG W+ EED++L+ +I HG GCW S+PK AGL RCGKSCRLRWINY
Sbjct: 1342 MGRSPCCEKAHTNKGAWTKEEDQRLVAYIKAHGEGCWRSLPKAAGLLRCGKSCRLRWINY 1521
Query: 438 LRPDLKRGAFAQDEEDLIIELHAVLGNRW 524
LRPDLKRG F Q+E++LII+LH +LGN++
Sbjct: 1522 LRPDLKRGNFTQEEDELIIKLHQILGNKY 1608
Score = 81.3 bits (171), Expect(2) = 1e-018
Identities = 40/87 (45%), Positives = 53/87 (60%)
Frame = -2 / -1
Query: 518 VPEDSVQLDDEVFFVLGECPSLEVWPQIVYPPQPTTLSAPLKPSEFGNRAPAAMAMLCYV 339
V ED V+LDDE F+LGE +LEV ++V PP+ L+A + G R PAA A+ V
Sbjct: 1602 VSEDLVELDDEFVFLLGEVAALEVGAEVVDPPEAAALAAAQQARRLG*RPPAAFAVRLDV 1423
Query: 338 IHEFLILLRGPEPLSQLLLVAARMPPH 258
E L+LL P L ++ L+AAR PPH
Sbjct: 1422 GDEPLVLLLCPRALVRVRLLAARRPPH 1342
Score = 63.4 bits (132), Expect(2) = 2e-013
Identities = 29/61 (47%), Positives = 34/61 (55%)
Frame = -3 / -2
Query: 523 HLFPRTACXXXXXXXXSWANAPLLRSGLR*FIHLSLQLFPHL*SPASLGTELQQPWPCFV 344
+LFPR SW P LRSG R* IH QL P PA+LG++LQQP PC +
Sbjct: 1607 YLFPRIWWSLMMSSSSSWVKLPRLRSGRR*LIHRRRQLLPQRSRPAALGSDLQQPSPCAL 1428
Query: 343 M 341
M
Sbjct: 1427 M 1425
Score = 51.0 bits (105), Expect(3) = 2e-049
Identities = 19/26 (73%), Positives = 22/26 (84%)
Frame = +3 / +3
Query: 519 RWSQIAAQLPGRTDNEIKNLWNSCIK 596
RWS IA +LPGRTDNEIKN WN+ I+
Sbjct: 1725 RWSLIAGRLPGRTDNEIKNYWNTPIQ 1802
Score = 43.7 bits (89), Expect(2) = 0.005
Identities = 28/73 (38%), Positives = 31/73 (42%)
Frame = +1 / +2
Query: 253 LRWGGILAATSRS*ERGSGPLRRMRNS*IT*QSMAMAAGALFPNSLGFKGAERVVG*GG* 432
L WGG AA R+ R G RR R S T + A AAG +P A R GG
Sbjct: 1337 LPWGGRRAARRRTRTRARGQRRRTRGSSPTSRRTAKAAGGRYPRRRACCAAARAAASGGS 1516
Query: 433 TI*GQTSREGHSP 471
T TS SP
Sbjct: 1517 TTSAPTSSAATSP 1555
Score = 34.5 bits (69), Expect(2) = 2e-013
Identities = 17/26 (65%), Positives = 18/26 (69%)
Frame = -3 / -3
Query: 592 MHEFHRFLISLSVLPGSCAAI*DHLF 515
M F FLISLSV PGS AI DHL+
Sbjct: 1798 MGVFQ*FLISLSVRPGSRPAISDHLY 1721
Score = 34.5 bits (69), Expect(2) = 1e-018
Identities = 14/27 (51%), Positives = 19/27 (70%)
Frame = -2 / -2
Query: 596 LDARVP*ILDLIISPPWQLRCNLRPPV 516
L+ RVP +LDL++ PP Q + RPPV
Sbjct: 1802 LNGRVPVVLDLVVRPPRQPPGDQRPPV 1722
Score = 29.5 bits (58), Expect(3) = 2e-049
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = +3 / +2
Query: 594 KKKLRQKGIDPNTHKP 641
K+KL +GIDP TH+P
Sbjct: 1802 KRKLIARGIDPRTHQP 1849
Score = 24.0 bits (46), Expect(2) = 0.005
Identities = 12/29 (41%), Positives = 14/29 (48%)
Frame = +1 / +1
Query: 544 CQGGLIMRSRIYGTRASRRS*GRKALIPT 630
C+GG RSR GTR + R PT
Sbjct: 1750 CRGGRTTRSRTTGTRPFKAQAHRPRHRPT 1836
>gb|CW414653.1|CW414653 fsbb001f114g17f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f114g17, DNA
sequence
Length = 669
Score = 136 bits (291), Expect(2) = 5e-048
Identities = 51/76 (67%), Positives = 62/76 (81%)
Frame = +3 / -3
Query: 297 KGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRGAFAQD 476
KG EED++L+ +I HG GCW S+PK AGL RCGKSCRLRWINYLRPDLKRG F D
Sbjct: 628 KGA*PKEEDDRLVAYIRAHGEGCWRSLPKAAGLMRCGKSCRLRWINYLRPDLKRGNFTAD 449
Query: 477 EEDLIIELHAVLGNRW 524
E+DLII+LH++LGN++
Sbjct: 448 EDDLIIKLHSLLGNKY 401
Score = 81.7 bits (172), Expect(2) = 5e-048
Identities = 31/48 (64%), Positives = 39/48 (81%)
Frame = +3 / -1
Query: 519 RWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPNTHKPLTEADHG 662
RWS IAA+LPGRTDNEIKN WN+ I++KL +GIDP TH+P+ +A G
Sbjct: 264 RWSLIAARLPGRTDNEIKNYWNTHIRRKLLGRGIDPVTHRPIADAGAG 121
Score = 62.0 bits (129), Expect(2) = 2e-016
Identities = 30/74 (40%), Positives = 42/74 (56%)
Frame = -2 / +2
Query: 518 VPEDSVQLDDEVFFVLGECPSLEVWPQIVYPPQPTTLSAPLKPSEFGNRAPAAMAMLCYV 339
V E++VQLDDEV V GE +LEV ++V P + L+A + G R PA A+ V
Sbjct: 407 VAEEAVQLDDEVVLVGGEVAALEVGAEVVDPAEAAALAAAHQSGRLGQRPPAPFAVRADV 586
Query: 338 IHEFLILLRGPEPL 297
H+ ++LL G L
Sbjct: 587 RHQAVVLLLGSRAL 628
Score = 51.5 bits (106), Expect(2) = 3e-010
Identities = 25/58 (43%), Positives = 29/58 (50%)
Frame = -3 / +3
Query: 523 HLFPRTACXXXXXXXXSWANAPLLRSGLR*FIHLSLQLFPHL*SPASLGTELQQPWPC 350
+L PR C S P LRSG R* I QL P SPA+LG++ Q P PC
Sbjct: 402 YLLPRRLCSLMMRSSSSAVKLPRLRSGRR*LIQRRRQLLPQRISPAALGSDRQHPSPC 575
Score = 50.1 bits (103), Expect(2) = 2e-016
Identities = 28/48 (58%), Positives = 29/48 (60%)
Frame = -3 / +2
Query: 661 P*SASVSGLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHL 518
P AS G V GSMP SF M F FLISLSV PGS AA+ DHL
Sbjct: 122 PAPASAMGRCVTGSMPLPSSFRRMCVFQ*FLISLSVRPGSRAAMSDHL 265
Score = 39.6 bits (80), Expect(2) = 3e-010
Identities = 17/36 (47%), Positives = 24/36 (66%)
Frame = -2 / +1
Query: 626 GINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPP 519
G++A QL D RVP +LDL++ PP + R + RPP
Sbjct: 157 GVDAPAKQLPPDVRVPVVLDLVVRPPREPRGDERPP 264
>gb|CW340501.1|CW340501 104_841_11485831_148_36147_022 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11485831, DNA
sequence
Length = 690
Score = 156 bits (336), Expect(2) = 1e-047
Identities = 58/90 (64%), Positives = 69/90 (76%)
Frame = +3 / -1
Query: 252 VEMGRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWI 431
V MGR CC K KG W+ EEDE+L+ +I HG GCW S+PK AGL RCGKSCRLRW+
Sbjct: 516 VAMGRSPCCEKAHTNKGAWTKEEDERLVAYIRAHGEGCWRSLPKAAGLPRCGKSCRLRWM 337
Query: 432 NYLRPDLKRGAFAQDEEDLIIELHAVLGNR 521
NYLRPDLKRG F DE++LII LH++LGN+
Sbjct: 336 NYLRPDLKRGNFTDDEDELIIRLHSLLGNK 247
Score = 90.9 bits (192), Expect(2) = 4e-022
Identities = 40/87 (45%), Positives = 56/87 (64%)
Frame = -2 / +1
Query: 518 VPEDSVQLDDEVFFVLGECPSLEVWPQIVYPPQPTTLSAPLKPSEFGNRAPAAMAMLCYV 339
V E++VQ DDE+ V+GE +LEV ++V+PPQP L+A + G RAPA + V
Sbjct: 250 VAEEAVQADDELVLVVGEVAALEVRAEVVHPPQPAALAAARQARRLGQRAPAPFPVRPDV 429
Query: 338 IHEFLILLRGPEPLSQLLLVAARMPPH 258
H+ L+LL GP L ++ L+AAR PPH
Sbjct: 430 RHQPLVLLLGPRALVRVRLLAARRPPH 510
Score = 64.8 bits (135), Expect(2) = 2e-013
Identities = 30/58 (51%), Positives = 32/58 (55%)
Frame = -3 / +2
Query: 523 HLFPRTACXXXXXXXXSWANAPLLRSGLR*FIHLSLQLFPHL*SPASLGTELQQPWPC 350
HL PR C S P LRSG R*FIH SLQL P PA+LG+E Q P PC
Sbjct: 245 HLLPRRLCRRMMSSSSSSVKLPRLRSGRR*FIHRSLQLLPQRGRPAALGSERQHPSPC 418
Score = 59.7 bits (124), Expect(2) = 1e-047
Identities = 23/29 (79%), Positives = 25/29 (86%)
Frame = +3 / -3
Query: 519 RWSQIAAQLPGRTDNEIKNLWNSCIKKKL 605
RWS IA QLPGRTDNEIKN WN+ IK+KL
Sbjct: 94 RWSLIAGQLPGRTDNEIKNYWNTHIKRKL 8
Score = 40.5 bits (82), Expect(2) = 4e-022
Identities = 20/29 (68%), Positives = 20/29 (68%)
Frame = -3 / +3
Query: 604 SFFLMHEFHRFLISLSVLPGSCAAI*DHL 518
S LM F FLISLSV PGSC AI DHL
Sbjct: 9 SLRLMCVFQ*FLISLSVRPGSCPAIRDHL 95
Score = 36.8 bits (74), Expect(2) = 2e-013
Identities = 15/29 (51%), Positives = 20/29 (68%)
Frame = -2 / +2
Query: 605 QLLLDARVP*ILDLIISPPWQLRCNLRPP 519
+L LD RVP +LDL++ P QL + RPP
Sbjct: 8 ELALDVRVPVVLDLVVRPARQLPGDQRPP 94
Score = 27.6 bits (54), Expect(2) = 8.6
Identities = 15/36 (41%), Positives = 17/36 (47%)
Frame = +1 / -2
Query: 364 AGALFPNSLGFKGAERVVG*GG*TI*GQTSREGHSP 471
AGA P + A R G GG*T +TS SP
Sbjct: 404 AGARCPRRRACRAAARAAGCGG*TTSARTSSAATSP 297
Score = 27.2 bits (53), Expect(2) = 8.6
Identities = 15/29 (51%), Positives = 18/29 (62%)
Frame = +2 / -2
Query: 518 QVVSNCSAAARED***DQESMELVHQEEA 604
QVVS+ AAA D DQE +E HQ +A
Sbjct: 95 QVVSDRRAAAGPDGQRDQELLEHAHQAQA 9
>gb|DN551956.1|DN551956 pSPR-RT-MR-H2_G12_S202 pSPR Sorghum propinquum cDNA, mRNA sequence
Length = 575
Score = 120 bits (256), Expect(4) = 8e-047
Identities = 50/72 (69%), Positives = 59/72 (81%)
Frame = -2 / +1
Query: 1811 RVQKENINFQEKGKETLEHTFLCILLQLLMPGLSFP*YCQLFN*GTAVEDDFCINLTYLC 1632
RV KE F+ K KETL TFLC+LL LMP LSFP*YCQ+F+* TAVEDDFC++L YLC
Sbjct: 307 RVHKETSIFKRKKKETLGRTFLCLLLPHLMPELSFP*YCQVFH*RTAVEDDFCVDLMYLC 486
Query: 1631 EQFSIILPTNL* 1596
+QFS++LPTNL*
Sbjct: 487 KQFSVVLPTNL* 522
Score = 116 bits (249), Expect(4) = 3e-041
Identities = 51/73 (69%), Positives = 59/73 (80%)
Frame = -3 / +2
Query: 1813 VVYRRKTSIFKRKERRL*NILSYASCCNF*CQGCPFLDIASSSTEEQLWRMISVST*RIY 1634
VVY RK + ++RRL*++L YA CC+ *CQ CPFLDIA SST+EQLWRMISVST* IY
Sbjct: 305 VVYIRKHQFSRERKRRL*DVLFYACCCHI*CQSCPFLDIARSSTDEQLWRMISVST*CIY 484
Query: 1633 VSNSA*FCPRISE 1595
VSNSA*F P+I E
Sbjct: 485 VSNSA*FFPQIFE 523
Score = 113 bits (242), Expect(4) = 2e-036
Identities = 54/89 (60%), Positives = 61/89 (68%)
Frame = -1 / +3
Query: 1851 HQREQKLKYAKVQSCTEGKHQFSRERKGDSRTYFPMHPAATSNARAVLSLILPALQLRNS 1672
H ++ L SCT G F + KGDSRTYF M AATSNARAVLSLILP L L NS
Sbjct: 267 HSEQKLLYAKFESSCT*GNINFQEKEKGDSRTYFSMPAAATSNARAVLSLILPGLPLTNS 446
Query: 1671 CGG*FLYQLNVSM*AIQHNSAHESLKIRV 1585
CGG*FL +LNV M*AIQ +S+H+SL V
Sbjct: 447 CGG*FLCRLNVFM*AIQRSSSHKSLNTSV 533
Score = 112 bits (240), Expect(3) = 3e-034
Identities = 51/80 (63%), Positives = 61/80 (76%)
Frame = +2 / -2
Query: 1574 EEAETRIFRDSWAELC*IAHIDTLS*YRNHPPQLFLS*RAGNIKERTALALEVAAGCIGK 1753
++ +T +F+D W EL *IA+I+TLS +RNHPPQLF+S R GNIKERTALAL+VAA I K
Sbjct: 544 QQKQTLVFKDLWEELR*IAYINTLSRHRNHPPQLFVSGRPGNIKERTALALDVAAAGIEK 365
Query: 1754 YVLESPFLSLEN*CFPSVHD 1813
YVLESPF FP VHD
Sbjct: 364 YVLESPFSFS*KLMFPYVHD 305
Score = 108 bits (230), Expect(4) = 9e-041
Identities = 48/72 (66%), Positives = 52/72 (72%)
Frame = +1 / -1
Query: 1597 QRFVGRIMLNCSHRYVKLIQKSSSTAVPQLKSWQYQGKDSPGIRSCSRMHRKVCSRVSFP 1776
QRFVGR LNC H+Y+K QKSSSTAV Q K+WQYQGKDS GIR S HRKV RVSF
Sbjct: 521 QRFVGRTTLNCLHKYIKSTQKSSSTAVRQWKTWQYQGKDSSGIRCGSSRHRKVRPRVSFF 342
Query: 1777 FS*KLMFSFCTR 1812
F K+ S CTR
Sbjct: 341 FLLKIDVSLCTR 306
Score = 95.5 bits (202), Expect(3) = 7e-025
Identities = 43/59 (72%), Positives = 51/59 (86%)
Frame = +3 / -3
Query: 1578 KQKLVFSEIRGQNYAELLT*IR*VDTEIILHSCSSVEELAISRKGQPWH*KLQQDA*ES 1754
+ + ++S+I G+NYAELLT*I *VDTEIILHSCSSVE+LAISRKGQ WH* QQ A*+S
Sbjct: 540 RSRHLYSKICGKNYAELLT*IH*VDTEIILHSCSSVEDLAISRKGQLWH*MWQQQA*KS 364
Score = 54.7 bits (113), Expect(4) = 8e-047
Identities = 21/28 (75%), Positives = 22/28 (78%)
Frame = -3 / +3
Query: 1930 KVWGYLHVESYRHMHFCLWLSIFI*FPP 1847
KVWG L ESYRHM F WLSIF+*FPP
Sbjct: 183 KVWGCLRGESYRHMKFSPWLSIFV*FPP 266
Score = 47.3 bits (97), Expect(4) = 3e-041
Identities = 20/30 (66%), Positives = 24/30 (80%)
Frame = -2 / +2
Query: 1931 ESLGLLAR*ELPTHAFLPMAIYIYLISTRE 1842
+SLGLLA *ELPTH PMA+Y+ LIST +
Sbjct: 182 KSLGLLAW*ELPTHEIFPMAVYLRLISTSQ 271
Score = 46.0 bits (94), Expect(3) = 3e-034
Identities = 22/48 (45%), Positives = 25/48 (52%)
Frame = +3 / -2
Query: 1848 GGN*INIDSHRQKCMCR*LSTCK*PQTFNCCHACPCKLIIACCIFHFF 1991
GGN IDSH + MCR*LS K PQTF ++ FHFF
Sbjct: 265 GGNQTKIDSHGENFMCR*LSPRKQPQTFERLPCTSMQINYGMLYFHFF 122
Score = 41.8 bits (85), Expect(4) = 2e-036
Identities = 18/35 (51%), Positives = 21/35 (60%)
Frame = -1 / +1
Query: 1929 KFGATCTLRATDTCIFAYGYLYLFNFHQREQKLKY 1825
KFGA C +RATDT F +G L F+FH K Y
Sbjct: 184 KFGAACVVRATDT*NFPHGCLSSFDFHLTVNKNSY 288
Score = 40.9 bits (83), Expect(4) = 9e-041
Identities = 17/27 (62%), Positives = 18/27 (66%)
Frame = +2 / -1
Query: 1850 WKLNKYR*P*AKMHVSVALNVQVAPNF 1930
WK N+ R P K HVSVAL Q APNF
Sbjct: 263 WKSNEDRQPWGKFHVSVALTTQAAPNF 183
Score = 39.6 bits (80), Expect(4) = 9e-041
Identities = 15/20 (75%), Positives = 16/20 (80%)
Frame = +2 / -2
Query: 1928 FQLLPCMSMQINYCMLYFSF 1987
F+ LPC SMQINY MLYF F
Sbjct: 184 FERLPCTSMQINYGMLYFHF 125
Score = 39.1 bits (79), Expect(4) = 8e-047
Identities = 15/24 (62%), Positives = 18/24 (75%)
Frame = -2 / +1
Query: 1991 KEMKNTTCNN*FAWTCMAAVESLG 1920
K +NTTC+N*FA TCM AV+ G
Sbjct: 121 KRNENTTCHN*FASTCMVAVQKFG 192
Score = 37.3 bits (75), Expect(4) = 9e-041
Identities = 14/21 (66%), Positives = 18/21 (85%)
Frame = +3 / -2
Query: 1542 LCSTTWNRADQKKQKLVFSEI 1604
LCST+ NRADQ+KQ LVF ++
Sbjct: 574 LCSTSCNRADQQKQTLVFKDL 512
Score = 35.9 bits (72), Expect(4) = 3e-041
Identities = 16/26 (61%), Positives = 17/26 (65%)
Frame = -3 / +2
Query: 1990 KK*KIQHAIINLHGHAWQQLKVWGYL 1913
K+ KIQHAIINLH AW K G L
Sbjct: 122 KEMKIQHAIINLHRRAW*PFKSLGLL 199
Score = 35.4 bits (71), Expect = 3.0
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = +3 / -3
Query: 1920 PQTFNCCHACPCKLIIACCIFHFF 1991
P+ N HA CKLI+ACCIF F
Sbjct: 192 PKLLNGYHARRCKLIMACCIFISF 121
Score = 35.4 bits (71), Expect(3) = 7e-025
Identities = 20/53 (37%), Positives = 24/53 (45%)
Frame = +1 / -3
Query: 1834 FLFSLVEXXXXXXXXGKNACVGSSQRASSPKLSTAAMHVHAN*LLHVVFFISF 1992
F+ VE GK +CVGSS ASSPKL ++ FISF
Sbjct: 279 FVHCEVEIKRR*TAMGKISCVGSSHHASSPKLLNGYHARRCKLIMACCIFISF 121
Score = 33.1 bits (66), Expect(4) = 2e-036
Identities = 12/15 (80%), Positives = 14/15 (93%)
Frame = -1 / +3
Query: 1980 KYNMQ*LICMDMHGS 1936
KYNM *LIC+D+HGS
Sbjct: 132 KYNMP*LICIDVHGS 176
Score = 32.7 bits (65), Expect(4) = 8e-047
Identities = 14/20 (70%), Positives = 15/20 (75%)
Frame = -3 / +3
Query: 1600 SENTSFCFF*SALFHVVEHN 1541
S NTS CF *SAL H VEH+
Sbjct: 516 SLNTSVCFC*SALLHEVEHS 575
Score = 27.6 bits (54), Expect(4) = 3e-041
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = -1 / +1
Query: 1602 SLKIRVSASSDLLCSMWWNI 1543
+L I+VSAS+D C M WNI
Sbjct: 514 NL*IQVSASADQPCYMRWNI 573
Score = 27.6 bits (54), Expect(3) = 3e-034
Identities = 11/17 (64%), Positives = 12/17 (70%)
Frame = +1 / -3
Query: 1543 YVPPHGTEQIRRSRNSY 1593
YVPPH T I RSR+ Y
Sbjct: 573 YVPPHVTGLISRSRHLY 523
Score = 23.5 bits (45), Expect(3) = 7e-025
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +2 / -3
Query: 1772 FLSLEN*CF 1798
FLSLEN*CF
Sbjct: 345 FLSLEN*CF 319
Score = 22.1 bits (42), Expect(4) = 2e-036
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = -2 / +2
Query: 1595 KYEFLLLLICSVPCGGT* 1542
+Y+ LLLLI V GGT*
Sbjct: 521 EYKCLLLLISPVT*GGT* 574
>gb|CD210026.1|CD210026 HS1_56_E12.g1_A012 Heat-shocked seedlings Sorghum bicolor cDNA
clone HS1_56_E12_A012 5', mRNA sequence
Length = 730
Score = 131 bits (281), Expect(3) = 1e-046
Identities = 51/76 (67%), Positives = 60/76 (78%)
Frame = +3 / +2
Query: 420 LRWINYLRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKK 599
LRW NYLRPD+KRG F+ EE II+LHA+LGNRWS IA LP RTDNEIKN WN+ +KK
Sbjct: 284 LRWTNYLRPDIKRGKFSLQEEQTIIQLHALLGNRWSAIATHLPNRTDNEIKNYWNTHLKK 463
Query: 600 KLRQKGIDPNTHKPLT 647
+L + GIDP THK L+
Sbjct: 464 RLAKMGIDPVTHKSLS 511
Score = 73.5 bits (154), Expect(2) = 1e-012
Identities = 36/83 (43%), Positives = 49/83 (59%)
Frame = -2 / -1
Query: 668 CTAVISLSKWLVGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDD 489
C A S ++ VG I+ L Q L+ VP +LDLI+ W + CN RPPV S++LDD
Sbjct: 532 CGASESATERFVGDRIDPHLGQPFLEVCVPVVLDLIVCAIW*MCCNGRPPVA*KSMKLDD 353
Query: 488 EVFFVLGECPSLEVWPQIVYPPQ 420
+ F+ E L+V PQ+V PPQ
Sbjct: 352 GLLFLQAELAPLDVRPQVVCPPQ 284
Score = 71.6 bits (150), Expect(3) = 1e-046
Identities = 26/49 (53%), Positives = 33/49 (67%)
Frame = +3 / +3
Query: 246 HCVEMGRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAG 392
H MGR CC K L+KG W+PEED+KL+ I +HGHG W ++P AG
Sbjct: 36 HTALMGRSPCCEKIGLKKGPWTPEEDQKLLAFIEEHGHGSWRALPAKAG 182
Score = 54.7 bits (113), Expect(2) = 1e-009
Identities = 25/45 (55%), Positives = 28/45 (62%)
Frame = -3 / -2
Query: 637 LWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTA 503
LWV GS+P S FL F FLISLSV G C A+ DHL P+ A
Sbjct: 501 LWVTGSIPILASLFLRCVFQ*FLISLSVRFGRCVAMADHLLPKRA 367
Score = 30.9 bits (61), Expect(2) = 1e-009
Identities = 12/16 (75%), Positives = 14/16 (87%)
Frame = -3 / -2
Query: 466 NAPLLRSGLR*FIHLS 419
N PLL SGLR*F+HL+
Sbjct: 330 NLPLLMSGLR*FVHLN 283
Score = 24.9 bits (48), Expect(3) = 1e-046
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +3 / +1
Query: 387 AGLQRCGKS 413
AGLQRCGKS
Sbjct: 253 AGLQRCGKS 279
Score = 22.1 bits (42), Expect(2) = 1e-012
Identities = 13/38 (34%), Positives = 18/38 (47%)
Frame = -2 / -3
Query: 371 APAAMAMLCYVIHEFLILLRGPEPLSQLLLVAARMPPH 258
+P M++L + LIL R P Q L+ A PH
Sbjct: 161 SPTPMSVLLNEGKQLLILFRRPWTFLQSNLLTAW*SPH 48
>gb|CW168642.1|CW168642 104_578_11154251_148_36600_042 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11154251, DNA
sequence
Length = 597
Score = 133 bits (286), Expect(2) = 2e-046
Identities = 49/78 (62%), Positives = 61/78 (78%)
Frame = +3 / +2
Query: 291 LRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRGAFA 470
L++G W+PEEDE L + K G G W ++P+ AGL RCGKSCRLRW+NYLRPD+KRG A
Sbjct: 131 LKRGAWTPEEDELLSRAVAKEGEGRWRTLPRRAGLLRCGKSCRLRWMNYLRPDIKRGPIA 310
Query: 471 QDEEDLIIELHAVLGNRW 524
DEEDLI+ LH +LGNR+
Sbjct: 311 ADEEDLILRLHRLLGNRY 364
Score = 76.2 bits (160), Expect(2) = 2e-016
Identities = 32/80 (40%), Positives = 49/80 (61%)
Frame = -2 / -3
Query: 539 RCNLRPPVPEDSVQLDDEVFFVLGECPSLEVWPQIVYPPQPTTLSAPLKPSEFGNRAPAA 360
+C L PV E +V+ +DEV V G+ P+L+V P++V+PP+P L+A +P RAP
Sbjct: 379 QCTLDVPVAEQAVEAEDEVLLVGGDGPALDVRPEVVHPPEPAALAAAQQPRAARQRAPPP 200
Query: 359 MAMLCYVIHEFLILLRGPEP 300
+L + + L+LLR P P
Sbjct: 199 FPLLRHGPRQQLVLLRRPRP 140
Score = 75.3 bits (158), Expect(2) = 2e-046
Identities = 29/42 (69%), Positives = 32/42 (76%)
Frame = +3 / +3
Query: 519 RWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPNTHKPL 644
RWS IA +LPGRTDNEIKN WNS + KKL +GIDP H PL
Sbjct: 471 RWSLIAGRLPGRTDNEIKNYWNSHLSKKLIARGIDPRAHTPL 596
Score = 54.2 bits (112), Expect(2) = 3e-013
Identities = 27/45 (60%), Positives = 29/45 (64%)
Frame = -3 / -3
Query: 640 GLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRT 506
G+ GSMP +SF L EF FLISLSV PGS AI DHL RT
Sbjct: 592 GVCARGSMPRAMSFLLRCEFQ*FLISLSVRPGSRPAISDHLHART 458
Score = 46.9 bits (96), Expect(2) = 3e-013
Identities = 23/41 (56%), Positives = 25/41 (60%)
Frame = -3 / -1
Query: 469 ANAPLLRSGLR*FIHLSLQLFPHL*SPASLGTELQQPWPCF 347
A P L SGLR*FIH SLQL P SPA G+ +P P F
Sbjct: 309 AMGPRLMSGLR*FIHRSLQLLPQRSSPARRGSVRHRPSPSF 187
Score = 32.2 bits (64), Expect(2) = 2e-016
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = -2 / -2
Query: 623 INAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPP 519
++A +LL + RVP +LDL++ P Q + RPP
Sbjct: 575 VDAPRDELLAEVRVPVVLDLVVRSPRQPPGDQRPP 471
>gb|CW057886.1|CW057886 104_300_10518454_1_30040 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10518454, DNA
sequence
Length = 618
Score = 154 bits (330), Expect(2) = 3e-046
Identities = 57/89 (64%), Positives = 69/89 (77%)
Frame = +3 / +3
Query: 255 EMGRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWIN 434
+MGR CC K L++G W+PEED L+ HI +HGH W ++PK AGL RCGKSCRLRWIN
Sbjct: 72 DMGRAPCCEKMGLKRGPWTPEEDRVLVAHIERHGHSNWRALPKQAGLLRCGKSCRLRWIN 251
Query: 435 YLRPDLKRGAFAQDEEDLIIELHAVLGNR 521
YLRPD+KRG F +EED II+LH +LGNR
Sbjct: 252 YLRPDIKRGNFTAEEEDAIIQLHQMLGNR 338
Score = 71.6 bits (150), Expect(2) = 1e-015
Identities = 35/92 (38%), Positives = 52/92 (56%)
Frame = -2 / -2
Query: 521 PVPEDSVQLDDEVFFVLGECPSLEVWPQIVYPPQPTTLSAPLKPSEFGNRAPAAMAMLCY 342
PV E V+LDD + + GE +L+V Q+V P + L+A + G RAP A+AM
Sbjct: 338 PVAEHLVELDDGILLLRGEVAALDVRAQVVDPSEAAALAAAEQARLLGQRAPVAVAMALD 159
Query: 341 VIHEFLILLRGPEPLSQLLLVAARMPPHLNAM 246
V H+ + L P P Q L+AAR PH++++
Sbjct: 158 VRHQDPVFLGRPRPPLQPHLLAARSAPHVSSL 63
Score = 57.9 bits (120), Expect(2) = 3e-046
Identities = 21/29 (72%), Positives = 27/29 (93%)
Frame = +3 / +3
Query: 519 RWSQIAAQLPGRTDNEIKNLWNSCIKKKL 605
RWS IAA+LPGRTDNEIKN+W++ +KK+L
Sbjct: 498 RWSAIAARLPGRTDNEIKNVWHTHLKKRL 584
Score = 37.7 bits (76), Expect(2) = 1e-015
Identities = 17/19 (89%), Positives = 17/19 (89%)
Frame = -3 / -3
Query: 574 FLISLSVLPGSCAAI*DHL 518
FLISLSVLPGS AAI DHL
Sbjct: 553 FLISLSVLPGSLAAIADHL 497
Score = 34.5 bits (69), Expect = 5.7
Identities = 14/28 (50%), Positives = 18/28 (64%)
Frame = -2 / -2
Query: 605 QLLLDARVP*ILDLIISPPWQLRCNLRP 522
Q LL+ VP +LDL++ PP Q N RP
Sbjct: 584 QALLEVSVPDVLDLVVRPPRQPGSNCRP 501
>gb|BI098875.1|BI098875 IP1_34_D01.b1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 249
Score = 186 bits (401), Expect = 9e-046
Identities = 75/80 (93%), Positives = 78/80 (97%)
Frame = +3 / +3
Query: 450 LKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPN 629
LKRGAF+QDEE+LIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPN
Sbjct: 9 LKRGAFSQDEEELIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPN 188
Query: 630 THKPLTEADHGGAAPTISTE 689
THKPLTEAD GAAPT+STE
Sbjct: 189 THKPLTEADRSGAAPTVSTE 248
Score = 172 bits (371), Expect = 1e-041
Identities = 73/80 (91%), Positives = 76/80 (95%)
Frame = -2 / -2
Query: 689 LGADGGSCTAVISLSKWLVGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPE 510
LGADGGSC+A ISLSK LVGVGINAFLPQLLLDARVP*ILDLIISPPWQL CNLRPPV E
Sbjct: 248 LGADGGSCSAAISLSKGLVGVGINAFLPQLLLDARVP*ILDLIISPPWQLCCNLRPPVSE 69
Query: 509 DSVQLDDEVFFVLGECPSLE 450
DSVQL+DE+FFVLGECPSLE
Sbjct: 68 DSVQLNDELFFVLGECPSLE 9
Score = 154 bits (331), Expect = 4e-036
Identities = 66/79 (83%), Positives = 66/79 (83%)
Frame = -3 / -3
Query: 688 SVLMVGAAPP*SASVSGLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPR 509
SVL VGAAP SASV GLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPR
Sbjct: 247 SVLTVGAAPLRSASVRGLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPR 68
Query: 508 TACXXXXXXXXSWANAPLL 452
TAC SW NAPLL
Sbjct: 67 TACSSMMSSSSSWENAPLL 11
Score = 121 bits (258), Expect = 5e-026
Identities = 55/80 (68%), Positives = 55/80 (68%)
Frame = +1 / +1
Query: 451 SREGHSPXXXXXXXXXXXXXXXXXXXXXQRSCQGGLIMRSRIYGTRASRRS*GRKALIPT 630
SREGHSP Q SCQGGLIMRSRIYGTRASRRS*GRKALIPT
Sbjct: 10 SREGHSPKTKKSSSLSCTLSSETGGLKLQHSCQGGLIMRSRIYGTRASRRS*GRKALIPT 189
Query: 631 PTSHLLRLITAVQLPPSAPR 690
PTS LLRLI A QLPPSAPR
Sbjct: 190 PTSPLLRLIAAEQLPPSAPR 249
Score = 95.9 bits (203), Expect = 2e-018
Identities = 43/46 (93%), Positives = 44/46 (95%)
Frame = +2 / +2
Query: 515 EQVVSNCSAAARED***DQESMELVHQEEAEAERH*SQHPQATY*G 652
+QVVSNCS AARED***DQESMELVHQEEAEAERH*SQHPQA Y*G
Sbjct: 74 KQVVSNCSTAARED***DQESMELVHQEEAEAERH*SQHPQAPY*G 211
Score = 73.9 bits (155), Expect = 8e-012
Identities = 33/58 (56%), Positives = 33/58 (56%)
Frame = -1 / -1
Query: 690 SRC*WWELHRRDQPQ*VACGCWDQCLXXXXXXXXXXXXXXXXXXXXSLAAALQFETTC 517
SRC* WEL R DQPQ* ACGCWDQCL SLAA LQFETTC
Sbjct: 249 SRC*RWELLRCDQPQ*GACGCWDQCLSASASS*CTSSIDS*SHYQSSLAAVLQFETTC 76
>gb|CW257497.1|CW257497 104_723_11227368_116_35159_096 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11227368, DNA
sequence
Length = 607
Score = 153 bits (328), Expect(2) = 3e-045
Identities = 55/88 (62%), Positives = 69/88 (78%)
Frame = +3 / -1
Query: 258 MGRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINY 437
MGR CC K KG W+ EED++L+ +I HG GCW S+PK AGL RCGKSCRLRW+NY
Sbjct: 469 MGRSPCCEKAHTNKGAWTKEEDQRLIAYIKAHGEGCWRSLPKAAGLLRCGKSCRLRWMNY 290
Query: 438 LRPDLKRGAFAQDEEDLIIELHAVLGNR 521
LRPDLKRG F D++++II+LHA+LGN+
Sbjct: 289 LRPDLKRGNFTDDDDEIIIKLHALLGNK 206
Score = 84.5 bits (178), Expect(2) = 9e-020
Identities = 38/87 (43%), Positives = 55/87 (63%)
Frame = -2 / +2
Query: 518 VPEDSVQLDDEVFFVLGECPSLEVWPQIVYPPQPTTLSAPLKPSEFGNRAPAAMAMLCYV 339
V E V+LDD++ V+GE +LEV ++V+P QP L+A + G RAPA +A+ V
Sbjct: 209 VAEQGVELDDDLVVVVGEVAALEVRAEVVHPAQPAALAAAEEARGLGQRAPATLAVRLDV 388
Query: 338 IHEFLILLRGPEPLSQLLLVAARMPPH 258
+ L+LL GP L ++ L+AAR PPH
Sbjct: 389 GDQALVLLLGPRALVRVRLLAARRPPH 469
Score = 57.0 bits (118), Expect(2) = 2e-011
Identities = 29/61 (47%), Positives = 33/61 (54%)
Frame = -3 / +3
Query: 523 HLFPRTACXXXXXXXXSWANAPLLRSGLR*FIHLSLQLFPHL*SPASLGTELQQPWPCFV 344
+L P A S P LRSG R*FI SLQL P PA+LG+E QQP PC +
Sbjct: 204 YLLPSRAWSLMMISSSSSVKLPRLRSGRR*FIQRSLQLLPQRRRPAALGSERQQPSPCAL 383
Query: 343 M 341
M
Sbjct: 384 M 386
Score = 55.6 bits (115), Expect(2) = 3e-045
Identities = 21/27 (77%), Positives = 23/27 (85%)
Frame = +3 / -2
Query: 519 RWSQIAAQLPGRTDNEIKNLWNSCIKK 599
RWS IA QLPGRTDNEIKN WN+ IK+
Sbjct: 81 RWSLIAGQLPGRTDNEIKNYWNTHIKR 1
Score = 43.7 bits (89), Expect(2) = 2e-004
Identities = 27/71 (38%), Positives = 31/71 (43%)
Frame = +1 / -2
Query: 259 WGGILAATSRS*ERGSGPLRRMRNS*IT*QSMAMAAGALFPNSLGFKGAERVVG*GG*TI 438
WGG+ AA R+ R GP RR T + A AGA P A R G G*T
Sbjct: 468 WGGLRAARRRTRTRARGPRRRTSA*SPTSRRTARVAGARCPRPRASSAAARAAGCAG*TT 289
Query: 439 *GQTSREGHSP 471
+TS SP
Sbjct: 288 SARTSSAATSP 256
Score = 38.6 bits (78), Expect(2) = 9e-020
Identities = 18/26 (69%), Positives = 19/26 (73%)
Frame = -3 / +2
Query: 595 LMHEFHRFLISLSVLPGSCAAI*DHL 518
LM F FLISLSV PGSC A+ DHL
Sbjct: 5 LMCVFQ*FLISLSVRPGSCPAMSDHL 82
Score = 34.5 bits (69), Expect(2) = 2e-011
Identities = 14/26 (53%), Positives = 18/26 (69%)
Frame = -2 / +1
Query: 596 LDARVP*ILDLIISPPWQLRCNLRPP 519
LD RVP +LDL++ P QL + RPP
Sbjct: 4 LDVRVPVVLDLVVRPAGQLPRDERPP 81
Score = 27.2 bits (53), Expect(2) = 2e-004
Identities = 14/26 (53%), Positives = 17/26 (65%)
Frame = +2 / -1
Query: 518 QVVSNCSAAARED***DQESMELVHQ 595
QVV++ AAAR D DQE +E HQ
Sbjct: 82 QVVAHRGAAARPDGQRDQELLEHAHQ 5
>gb|CL150110.1|CL150110 104_331_10778290_114_31355_226 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10778290, DNA
sequence
Length = 531
Score = 101 bits (216), Expect(2) = 5e-044
Identities = 42/65 (64%), Positives = 47/65 (72%)
Frame = +3 / +3
Query: 516 NRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPNTHKPLTEADHGGAAPTISTERT 695
+RWSQIA QLPGRTDNE+KN WNS IKKKLRQ+GIDP THKPL A A + RT
Sbjct: 255 HRWSQIATQLPGRTDNEVKNFWNSYIKKKLRQRGIDPATHKPLPLAADASRAAAAGSSRT 434
Query: 696 SGSSD 710
+ SD
Sbjct: 435 AVFSD 449
Score = 99.1 bits (210), Expect(2) = 5e-044
Identities = 36/44 (81%), Positives = 43/44 (97%)
Frame = +3 / +2
Query: 390 GLQRCGKSCRLRWINYLRPDLKRGAFAQDEEDLIIELHAVLGNR 521
GL+RCGKSCRLRWINYLRPDLKRGAF+Q+EEDLII LH+++GN+
Sbjct: 14 GLERCGKSCRLRWINYLRPDLKRGAFSQEEEDLIIHLHSMMGNK 145
Score = 75.8 bits (159), Expect(2) = 4e-022
Identities = 33/46 (71%), Positives = 37/46 (80%)
Frame = -3 / -3
Query: 655 SASVSGLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHL 518
+AS SGL V GS+P C SFFLM+EF +FL SLSV PGSC AI*DHL
Sbjct: 394 AASGSGLCVAGSIPRCRSFFLMYEFQKFLTSLSVRPGSCVAI*DHL 257
Score = 68.0 bits (142), Expect(2) = 3e-019
Identities = 31/59 (52%), Positives = 38/59 (64%)
Frame = -2 / -2
Query: 683 ADGGSCTAVISLSKWLVGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPED 507
A GG V + LV ++ LP+LLLD RVP +LDL++ PP QLRCNLRPPV D
Sbjct: 422 ARGGGPAGVGGQRERLVRGRVDPALPELLLDVRVPEVLDLVVRPPRQLRCNLRPPVLAD 246
Score = 53.3 bits (110), Expect(2) = 3e-019
Identities = 23/26 (88%), Positives = 23/26 (88%)
Frame = -3 / -1
Query: 466 NAPLLRSGLR*FIHLSLQLFPHL*SP 389
NAPLLRSGLR* IHLSLQLFPHL P
Sbjct: 90 NAPLLRSGLR*LIHLSLQLFPHLSRP 13
Score = 51.9 bits (107), Expect(2) = 4e-022
Identities = 21/41 (51%), Positives = 25/41 (60%)
Frame = -2 / -3
Query: 518 VPEDSVQLDDEVFFVLGECPSLEVWPQIVYPPQPTTLSAPL 396
V +++DDEV L EC LEV PQ+V PPQP L PL
Sbjct: 142 VAHHGMEMDDEVLLFLRECSPLEVRPQVVDPPQPAALPTPL 20
Score = 46.4 bits (95), Expect(2) = 3e-006
Identities = 24/41 (58%), Positives = 27/41 (65%)
Frame = +2 / +2
Query: 518 QVVSNCSAAARED***DQESMELVHQEEAEAERH*SQHPQA 640
QVVS+C+AAA D QE +ELVHQEEA A R H QA
Sbjct: 257 QVVSDCNAAAGADGQRGQELLELVHQEEAPAARDRPGHAQA 379
Score = 40.5 bits (82), Expect = 0.092
Identities = 25/59 (42%), Positives = 27/59 (45%)
Frame = +1 / +1
Query: 535 QRSCQGGLIMRSRIYGTRASRRS*GRKALIPTPTSHLLRLITAVQLPPSAPREPQGPAT 711
QRSC+GG RSR GTR SRRS G TS T PP A + AT
Sbjct: 274 QRSCRGGRTTRSRTSGTRTSRRSSGSAGSTRPRTSRSRWPPTPAGPPPRAAAARRCSAT 450
Score = 30.4 bits (60), Expect(2) = 3e-006
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = +1 / +3
Query: 397 KGAERVVG*GG*TI*GQTSREGHS 468
+G R G*GG T *G+TSR HS
Sbjct: 21 RGVGRAAG*GGSTT*GRTSRGEHS 92
>gb|AF474125.1| Sorghum bicolor typical A-type R2R3 Myb protein (MybY1) gene,
partial cds
Length = 318
Score = 180 bits (387), Expect = 8e-044
Identities = 67/105 (63%), Positives = 85/105 (80%)
Frame = +3 / +1
Query: 291 LRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRGAFA 470
L++G W+ EED+ L N+I +HG G W S+PK AGL RCGKSCRLRWINYLR D+KRG +
Sbjct: 4 LKRGRWTAEEDQILANYIAEHGEGSWRSLPKNAGLLRCGKSCRLRWINYLRADVKRGNIS 183
Query: 471 QDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKL 605
++EED+II+LHA LGNRWS IA+ PGRTDNEIKN WNS + +++
Sbjct: 184 KEEEDIIIKLHATLGNRWSLIASHFPGRTDNEIKNYWNSHLSRQI 318
Score = 116 bits (248), Expect = 1e-024
Identities = 45/98 (45%), Positives = 68/98 (69%)
Frame = -2 / -1
Query: 593 DARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECPSLEVWPQIVYPPQPT 414
+ R+P +LDL++ ++ + PPV E V+LDD+V F+LG+ PSL+V P++V PPQP
Sbjct: 306 EVRIPVVLDLVVCSAGEVAGDQGPPVAEGGVELDDDVLFLLGDVPSLDVGPKVVDPPQPA 127
Query: 413 TLSAPLKPSEFGNRAPAAMAMLCYVIHEFLILLRGPEP 300
L+AP +P G R P ++A+LC V+ E+L+LLR P P
Sbjct: 126 ALAAPEQPCILGQRPPGSLAVLCNVVGEYLVLLRRPPP 13
Score = 85.4 bits (180), Expect = 3e-015
Identities = 44/82 (53%), Positives = 46/82 (56%)
Frame = -3 / -2
Query: 586 EFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANAPLLRSGLR*FIHLSLQLF 407
EF FLISLSV PG AI DHL PR A S PLL S R* IH S QL
Sbjct: 299 EFQ*FLISLSVRPGKWLAIRDHLLPRVAWSLMMMSSSSLEMFPLLTSARR*LIHRSRQLL 120
Query: 406 PHL*SPASLGTELQQPWPCFVM 341
PH SPA LG++LQ P PC M
Sbjct: 119 PHRSSPAFLGSDLQDPSPCSAM 54
>gb|BZ330053.1|BZ330053 hv89f07.g1 WGS-SbicolorF (JM107 adapted methyl filtered) Sorghum
bicolor genomic clone hv89f07 5', DNA sequence
Length = 645
Score = 100 bits (213), Expect(2) = 1e-043
Identities = 38/49 (77%), Positives = 43/49 (87%)
Frame = +3 / -2
Query: 390 GLQRCGKSCRLRWINYLRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIA 536
GLQRCGKSCRLRWINYLRPDLKRG+F+Q EED I+ LH +LGNR+ Q A
Sbjct: 623 GLQRCGKSCRLRWINYLRPDLKRGSFSQQEEDAIVGLHEILGNRYIQYA 477
Score = 99.6 bits (211), Expect(2) = 1e-043
Identities = 36/45 (80%), Positives = 42/45 (93%)
Frame = +3 / -1
Query: 513 GNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPNTHKPLT 647
G RWSQIA+ LPGRTDNEIKN WNSC+KKKLRQ+GIDP+THKP++
Sbjct: 387 GCRWSQIASHLPGRTDNEIKNFWNSCLKKKLRQRGIDPSTHKPIS 253
Score = 69.3 bits (145), Expect(2) = 3e-021
Identities = 30/44 (68%), Positives = 32/44 (72%)
Frame = -3 / +2
Query: 640 GLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPR 509
GLWVLGSMP SFFL F +FLISLSV PG C AI DHL P+
Sbjct: 260 GLWVLGSMPRWRSFFLRQLFQKFLISLSVRPGKCDAICDHLHPQ 391
Score = 56.5 bits (117), Expect = 1e-006
Identities = 24/49 (48%), Positives = 33/49 (67%)
Frame = -2 / +1
Query: 638 LVGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLD 492
LVG G++A L QLLL+A VP +LDL++ P Q+R +LRPP +D
Sbjct: 262 LVGAGVDAALAQLLLEAAVPEVLDLVVRPARQVRRDLRPPASAKKKYID 408
Score = 55.1 bits (114), Expect(2) = 3e-021
Identities = 24/53 (45%), Positives = 32/53 (60%)
Frame = -2 / +3
Query: 536 CNLRPPVPEDSVQLDDEVFFVLGECPSLEVWPQIVYPPQPTTLSAPLKPSEFG 378
C L PVP+D V+ DD V +L E L+V Q+V PP+ L+APL+P G
Sbjct: 477 CVLYVPVPQDLVEADDGVLLLLREAAPLQVGAQVVDPPKSAALAAPLQPCTNG 635
Score = 41.8 bits (85), Expect(3) = 4e-004
Identities = 20/51 (39%), Positives = 24/51 (47%)
Frame = -3 / +1
Query: 523 HLFPRTACXXXXXXXXSWANAPLLRSGLR*FIHLSLQLFPHL*SPASLGTE 371
+LFPR + P RSG R* IH S QL PHL SP + +
Sbjct: 490 YLFPRISWRPTMASSSCCEKLPRFRSGRR*LIHRSRQLLPHLCSPVPMADD 642
Score = 39.6 bits (80), Expect = 0.17
Identities = 18/35 (51%), Positives = 21/35 (60%)
Frame = +1 / -2
Query: 535 QRSCQGGLIMRSRIYGTRASRRS*GRKALIPTPTS 639
+R+C+ G RSR GT ASRRS A P PTS
Sbjct: 365 RRTCRAGRTTRSRTSGTAASRRSCASAASTPAPTS 261
Score = 39.1 bits (79), Expect = 0.24
Identities = 21/41 (51%), Positives = 25/41 (60%)
Frame = +2 / -3
Query: 518 QVVSNCSAAARED***DQESMELVHQEEAEAERH*SQHPQA 640
QVV++ A A D DQE +E + QEEA RH QHPQA
Sbjct: 382 QVVADRVALAGPDGQRDQELLEQLPQEEAAPARHRPQHPQA 260
Score = 24.9 bits (48), Expect(3) = 4e-004
Identities = 6/8 (75%), Positives = 7/8 (87%)
Frame = -1 / +3
Query: 639 ACGCWDQC 616
ACGCW +C
Sbjct: 261 ACGCWGRC 284
Score = 21.7 bits (41), Expect(3) = 4e-004
Identities = 6/8 (75%), Positives = 7/8 (87%)
Frame = -3 / +3
Query: 1135 LPMPVPPC 1112
+PMP PPC
Sbjct: 225 VPMPPPPC 248
>gb|CW202832.1|CW202832 104_629_11185306_116_36915_043 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11185306, DNA
sequence
Length = 615
Score = 104 bits (221), Expect(2) = 2e-043
Identities = 36/46 (78%), Positives = 43/46 (93%)
Frame = +3 / -2
Query: 258 MGRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGL 395
M + SCC+K+KLR+GLWSPEEDEKLMNHI ++GHGCWSSVPKLAG+
Sbjct: 515 MAKQSCCHKKKLRRGLWSPEEDEKLMNHIAQYGHGCWSSVPKLAGI 378
Score = 98.7 bits (209), Expect(2) = 2e-043
Identities = 36/45 (80%), Positives = 43/45 (95%)
Frame = +3 / -3
Query: 387 AGLQRCGKSCRLRWINYLRPDLKRGAFAQDEEDLIIELHAVLGNR 521
+GL+RCGKSCRLRWINYLRPDLKRG F+Q+EEDLII LH++LGN+
Sbjct: 244 SGLERCGKSCRLRWINYLRPDLKRGTFSQEEEDLIIHLHSLLGNK 110
Score = 62.5 bits (130), Expect(2) = 9e-020
Identities = 23/42 (54%), Positives = 30/42 (71%)
Frame = -2 / +2
Query: 518 VPEDSVQLDDEVFFVLGECPSLEVWPQIVYPPQPTTLSAPLK 393
V + V++ DEV +L EC LEVWPQ+VYPPQP L+ PL+
Sbjct: 113 VSQQGVEVYDEVLLLL*ECSPLEVWPQVVYPPQPAALATPLE 238
Score = 60.6 bits (126), Expect(2) = 5e-018
Identities = 27/48 (56%), Positives = 30/48 (62%)
Frame = -1 / +2
Query: 387 RVWEQSSSSHGHALLCDS*VSHPPQGTRAPFSASACSSKNASPSQRNA 244
+ W SSSSHG C S* S PP+GTRA SAS+C S ASP R A
Sbjct: 386 QAWALSSSSHGRTGQCGS*ASRPPRGTRALSSASSCGSTTASPWHRQA 529
Score = 60.6 bits (126), Expect(2) = 9e-020
Identities = 27/43 (62%), Positives = 33/43 (76%)
Frame = -2 / +3
Query: 386 EFGNRAPAAMAMLCYVIHEFLILLRGPEPLSQLLLVAARMPPH 258
+ G+ APAAMA+L V+HE L+LL GPEP QLLLVAAR+ H
Sbjct: 387 KLGH*APAAMAVLGNVVHELLVLLGGPEPSPQLLLVAARLLRH 515
Score = 56.5 bits (117), Expect(2) = 5e-018
Identities = 27/46 (58%), Positives = 29/46 (63%)
Frame = -3 / +3
Query: 526 DHLFPRTACXXXXXXXXSWANAPLLRSGLR*FIHLSLQLFPHL*SP 389
++LFP S N PLLRSGLR*FIHLSLQL PHL SP
Sbjct: 105 NYLFPSKEWRCMMRSSSSCENVPLLRSGLR*FIHLSLQLLPHLSSP 242
Score = 55.1 bits (114), Expect(2) = 5e-010
Identities = 25/41 (60%), Positives = 28/41 (68%)
Frame = +2 / -1
Query: 260 GEAFLLLQAEAEKGALVP*GG*ETHESHNKAWPWLLELCSQ 382
GEA +L Q EAE+ ALVP GG E HE H PWLLEL +Q
Sbjct: 513 GEAVVLPQEEAEERALVPRGGREAHEPHCPVRPWLLELSAQ 391
Score = 47.8 bits (98), Expect = 6e-004
Identities = 25/42 (59%), Positives = 27/42 (64%)
Frame = +1 / -3
Query: 259 WGGILAATSRS*ERGSGPLRRMRNS*IT*QSMAMAAGALFPN 384
W AAT RS* GSGP RR R+S* T S AMAAGA P+
Sbjct: 514 WRSSRAATRRS*GEGSGPPRRTRSS*TTLPSTAMAAGAQCPS 389
Score = 39.6 bits (80), Expect(2) = 0.003
Identities = 18/46 (39%), Positives = 22/46 (47%)
Frame = -3 / +1
Query: 391 PASLGTELQQPWPCFVMXXXXXXXXXXXXXXXXXFCL*QQECLPIS 254
PASLGTELQQPWP + M F L Q +C ++
Sbjct: 382 PASLGTELQQPWPYWAMWFMSFSSSSGDQSPLLSFFLWQHDCFAMA 519
Score = 35.0 bits (70), Expect(2) = 5e-010
Identities = 16/24 (66%), Positives = 17/24 (70%)
Frame = +1 / -1
Query: 397 KGAERVVG*GG*TI*GQTSREGHS 468
+G R G*GG*T *GQTSR HS
Sbjct: 234 RGVARAAG*GG*TT*GQTSRGEHS 163
Score = 27.2 bits (53), Expect(2) = 0.003
Identities = 14/19 (73%), Positives = 15/19 (78%)
Frame = -1 / +1
Query: 456 S*GLASDSLSTSAYNSFRT 400
S*GLAS SLSTSA +S T
Sbjct: 175 S*GLASGSLSTSACSSCHT 231
>gb|CW314050.1|CW314050 104_804_11471615_148_35798_088 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11471615, DNA
sequence
Length = 629
Score = 177 bits (381), Expect = 5e-043
Identities = 67/118 (56%), Positives = 88/118 (74%)
Frame = +3 / +2
Query: 258 MGRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINY 437
MGR CC K+ ++KG W+PEED L+++I +HG G W SVP GL RC KSCRLRW NY
Sbjct: 89 MGRPPCCDKEGIKKGPWTPEEDIILVSYIQEHGPGNWRSVPINTGLMRCSKSCRLRWTNY 268
Query: 438 LRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQ 611
LRP ++RG F EE +I+ L ++LGNRW+ IA+ LP RTDN+IKN WN+ +KKKL++
Sbjct: 269 LRPGIRRGNFTPHEEGIIVHLQSLLGNRWAAIASYLPQRTDNDIKNYWNTHLKKKLKK 442
Score = 103 bits (219), Expect = 1e-020
Identities = 51/129 (39%), Positives = 74/129 (57%)
Frame = -2 / -2
Query: 611 LPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECPSLEVWPQIV 432
L +LLL+ VP +LD+++ ++R N PPV E +++DD+ F V GE + + ++V
Sbjct: 442 LLELLLEVGVPVVLDVVVGSLREVRSNGGPPVAEQGLEVDDDAFLVRGEVAAADAGAEVV 263
Query: 431 YPPQPTTLSAPLKPSEFGNRAPAAMAMLCYVIHEFLILLRGPEPLSQLLLVAARMPPHLN 252
PP+ L+A +P GN AP A A+L V H+ +LLR P PL LVAAR P H
Sbjct: 262 GPPEAAALAAAHEPRVDGNGAPVARAVLLDVGHQDDVLLRRPWPLLDPFLVAARWPAHGG 83
Query: 251 AMQNLGAPT 225
A +L T
Sbjct: 82 AGCSLSTST 56
Score = 43.2 bits (88), Expect = 0.014
Identities = 27/71 (38%), Positives = 32/71 (45%)
Frame = +1 / +3
Query: 259 WGGILAATSRS*ERGSGPLRRMRNS*IT*QSMAMAAGALFPNSLGFKGAERVVG*GG*TI 438
W G AAT + RG G RR + T +S A A GA FP++ G A R GG T
Sbjct: 90 WAGHRAATRKGSRRGHGRRRRTSSWCPTSRSTARATGAPFPSTRGSCAAARAAASGGPTT 269
Query: 439 *GQTSREGHSP 471
S SP
Sbjct: 270 SAPASAAATSP 302
Score = 33.6 bits (67), Expect(2) = 3e-004
Identities = 18/32 (56%), Positives = 20/32 (62%)
Frame = -3 / -3
Query: 607 LSFFLMHEFHRFLISLSVLPGSCAAI*DHLFP 512
LSFFL F FL+SLSVL G A+ HL P
Sbjct: 438 LSFFLRWVFQ*FLMSLSVLCGR*EAMAAHLLP 343
Score = 33.1 bits (66), Expect(2) = 3e-004
Identities = 16/37 (43%), Positives = 18/37 (48%)
Frame = -3 / -3
Query: 460 PLLRSGLR*FIHLSLQLFPHL*SPASLGTELQQPWPC 350
P G R* +H QL SP +GTE Q P PC
Sbjct: 291 PRRMPGRR*LVHRRRQLLLQRMSPVLMGTERQLPGPC 181
>gb|CN124270.1|CN124270 RHOH1_3_E09.g1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_3_E09_A002 5', mRNA sequence
Length = 670
Score = 80.8 bits (170), Expect(3) = 1e-042
Identities = 30/44 (68%), Positives = 35/44 (79%)
Frame = +3 / +2
Query: 204 TCKLCEFGWSSQVLHCVEMGRHSCCYKQKLRKGLWSPEEDEKLM 335
+C+LC S+ V + MGRHSCCYKQKLRKGLWSPEEDEKL+
Sbjct: 263 SCELCRLQSSASVSALLSMGRHSCCYKQKLRKGLWSPEEDEKLL 394
Score = 73.9 bits (155), Expect(3) = 1e-042
Identities = 30/58 (51%), Positives = 42/58 (72%)
Frame = +3 / +1
Query: 807 RAETPNLARPKLPPKELFLEQLTAGHESPSTCHSSGQTLYFPFQQPLGYNSESGSSDG 980
R ET +LA ++PPKELFL+QL +GHE+ ++C S+G FPFQQ + YN+E G +G
Sbjct: 379 R*ETTSLAHLRVPPKELFLDQLVSGHENLTSCRSTGPIPNFPFQQLMCYNNEFGHKNG 552
Score = 66.1 bits (138), Expect(3) = 1e-042
Identities = 27/38 (71%), Positives = 31/38 (81%)
Frame = +3 / +2
Query: 978 GANMNSLWFNQSDFNCSTISTVMPPVSPSALSTSMGLN 1091
G + NS WFNQ++ + STISTVMPPVSPS LSTS GLN
Sbjct: 551 GGSNNSFWFNQNESSGSTISTVMPPVSPSTLSTSTGLN 664
Score = 64.8 bits (135), Expect(3) = 1e-023
Identities = 25/34 (73%), Positives = 29/34 (85%)
Frame = -3 / -2
Query: 1087 SPIDVERADGETGGITVEIVLQLKSLWLNQSEFI 986
SP+DVER DGETGGITVE+VL L S WLNQ+E +
Sbjct: 660 SPVDVERVDGETGGITVEMVLPLDSFWLNQNELL 559
Score = 47.8 bits (98), Expect(3) = 1e-023
Identities = 23/43 (53%), Positives = 27/43 (62%)
Frame = -3 / -3
Query: 940 CWKGK*RVWPDEWQVDGLSCPAVSCSRNSSFGGSLGRAKFGVS 812
CWKGK + P E Q+ S P S SRN+SFGG+L AK VS
Sbjct: 512 CWKGKFGIGPVERQLVRFS*PETSWSRNNSFGGTLRCAKLVVS 384
Score = 47.3 bits (97), Expect(3) = 5e-018
Identities = 23/52 (44%), Positives = 30/52 (57%)
Frame = +1 / +2
Query: 826 WHALSCHQRSCSWSSLLLDTRVHQPATHQAKLSISLSNSP*ATTVRVAAAMG 981
WH C +RS S +SL L + A QA+ ISLS+S ATT+ +A MG
Sbjct: 398 WHI*GCRRRSYSLTSLFLVMKTSLAAAQQAQFQISLSSS*CATTMNLATRMG 553
Score = 47.3 bits (97), Expect(2) = 5e-010
Identities = 21/41 (51%), Positives = 27/41 (65%)
Frame = -1 / -3
Query: 381 WEQSSSSHGHALLCDS*VSHPPQGTRAPFSASACSSKNASP 259
W +++S G VSH PQ TRAP SASAC+S++ASP
Sbjct: 440 WSRNNSFGGTLRCAKLVVSHLPQETRAPSSASACNSRSASP 318
Score = 46.4 bits (95), Expect(3) = 5e-018
Identities = 19/32 (59%), Positives = 22/32 (68%)
Frame = +1 / +3
Query: 991 IHSGSTRVTSTAAQFLQ*CRQFHHRPSLHQWG 1086
IHSG TR++ AA F *C QFHH+ S HQ G
Sbjct: 564 IHSGLTRMSQVAAPFPP*CHQFHHQLSQHQQG 659
Score = 43.7 bits (89), Expect(3) = 1e-015
Identities = 19/34 (55%), Positives = 25/34 (73%)
Frame = +2 / +1
Query: 989 EFTLVQPE*LQLQHNFYSDAASFTIGPLYINGAE 1090
+F LV PE*++ QH+F+ DA SFTI L IN A+
Sbjct: 562 QFILV*PE*VKWQHHFHRDATSFTINSLNINRAQ 663
Score = 43.7 bits (89), Expect(3) = 1e-015
Identities = 20/40 (50%), Positives = 24/40 (60%)
Frame = +2 / +3
Query: 824 LGTP*AATKGAVPGAAYCWTRESINLPLIRPNSLFPFPTA 943
LGT A +G +P A W+ + LPL RPNS FPFP A
Sbjct: 396 LGTSKGAAEGVIP*PACFWS*KPH*LPLNRPNSKFPFPAA 515
Score = 43.7 bits (89), Expect(3) = 1e-023
Identities = 18/24 (75%), Positives = 19/24 (79%)
Frame = -2 / -1
Query: 329 FLILLRGPEPLSQLLLVAARMPPH 258
FLI LR PEPL QLLLV A +PPH
Sbjct: 388 FLIFLRRPEPLPQLLLVTAGVPPH 317
Score = 43.2 bits (88), Expect(3) = 5e-018
Identities = 20/34 (58%), Positives = 24/34 (70%)
Frame = +1 / +3
Query: 238 RFCIALRWGGILAATSRS*ERGSGPLRRMRNS*I 339
+F +WGG A TSRS* RGSG LR+MRN *+
Sbjct: 297 QFQHCFQWGGTPAVTSRS*GRGSGLLRKMRNY*L 398
Score = 42.8 bits (87), Expect(2) = 5e-010
Identities = 20/34 (58%), Positives = 23/34 (67%)
Frame = -2 / -1
Query: 1091 IQPH*CREGRW*NWRHHCRNCAAVEVTLVEPE*I 990
I+P *C E W*NW HH N AA + LV+PE*I
Sbjct: 664 IEPC*C*ES*W*NWWHHGGNGAAT*LILVKPE*I 563
Score = 41.8 bits (85), Expect(3) = 1e-015
Identities = 20/25 (80%), Positives = 22/25 (88%)
Frame = +2 / +1
Query: 257 DGEAFLLLQAEAEKGALVP*GG*ET 331
+GEA LLLQAEAE+GALV *G *ET
Sbjct: 316 NGEALLLLQAEAEEGALVS*GR*ET 390
Score = 32.7 bits (65), Expect(2) = 0.051
Identities = 18/40 (45%), Positives = 20/40 (50%)
Frame = -1 / -1
Query: 942 AVGKGNREFGLMSGRLMDSRVQQ*AAPGTAPLVAA*GVPS 823
A GKGN E GL+SG Q+ A G P A VPS
Sbjct: 514 AAGKGNLELGLLSGS**GFHDQKQAGQGITPSAAPLDVPS 395
Score = 29.9 bits (59), Expect(2) = 0.051
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = -3 / -2
Query: 286 CL*QQECLPISTQCRT 239
CL*QQECLPI + T
Sbjct: 345 CL*QQECLPIESNAET 298
>gb|BZ336394.1|BZ336394 hz34a02.g1 WGS-SbicolorF (JM107 adapted methyl filtered) Sorghum
bicolor genomic clone hz34a02 5', DNA sequence
Length = 561
Score = 100 bits (214), Expect(2) = 1e-042
Identities = 39/45 (86%), Positives = 42/45 (93%)
Frame = +3 / -3
Query: 387 AGLQRCGKSCRLRWINYLRPDLKRGAFAQDEEDLIIELHAVLGNR 521
AGLQRCGKSCRLRWINYLRPDLKRG+F+Q EE LI+ELH VLGNR
Sbjct: 151 AGLQRCGKSCRLRWINYLRPDLKRGSFSQQEEALIVELHRVLGNR 17
Score = 98.7 bits (209), Expect(2) = 1e-042
Identities = 35/45 (77%), Positives = 40/45 (88%)
Frame = +3 / -3
Query: 258 MGRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAG 392
MGRHSCC KQK+R+GLWSPEEDEKL+ +IT GHGCWSSVP+ AG
Sbjct: 490 MGRHSCCNKQKVRRGLWSPEEDEKLIKYITTRGHGCWSSVPRQAG 356
Score = 57.4 bits (119), Expect(2) = 8e-015
Identities = 24/44 (54%), Positives = 30/44 (68%)
Frame = -2 / +2
Query: 521 PVPEDSVQLDDEVFFVLGECPSLEVWPQIVYPPQPTTLSAPLKP 390
PV + V+LDDE +L E LEV PQ+V PPQP L+APL+P
Sbjct: 17 PVAKHPVELDDEGLLLLREASPLEVRPQVVDPPQPAALAAPLQP 148
Score = 52.8 bits (109), Expect(2) = 3e-012
Identities = 25/47 (53%), Positives = 26/47 (55%)
Frame = -3 / +3
Query: 526 DHLFPRTACXXXXXXXXSWANAPLLRSGLR*FIHLSLQLFPHL*SPA 386
D+L P T PLLRSGLR* IHLSLQL PH SPA
Sbjct: 12 DYLLPSTLWSSTMRASSCCEKLPLLRSGLR*LIHLSLQLLPHRCSPA 152
Score = 48.7 bits (100), Expect(2) = 8e-015
Identities = 21/42 (50%), Positives = 24/42 (57%)
Frame = -1 / +1
Query: 384 VWEQSSSSHGHALLCDS*VSHPPQGTRAPFSASACSSKNASP 259
VW SSSSHG A C * S PP T P SAC S++ +P
Sbjct: 364 VWGLSSSSHGRAW*CT**ASRPPPATTGPAGPSACCSRSGAP 489
Score = 48.7 bits (100), Expect(2) = 1e-006
Identities = 22/42 (52%), Positives = 25/42 (59%)
Frame = +2 / -2
Query: 260 GEAFLLLQAEAEKGALVP*GG*ETHESHNKAWPWLLELCSQT 385
G LL QAE G +V GG E H+ H+ A PWLLEL QT
Sbjct: 488 GAPLLLQQAEGPAGPVVAGGGREAHQVHHHARPWLLELSPQT 363
Score = 44.6 bits (91), Expect(2) = 3e-012
Identities = 22/41 (53%), Positives = 27/41 (65%)
Frame = -2 / +2
Query: 380 GNRAPAAMAMLCYVIHEFLILLRGPEPLSQLLLVAARMPPH 258
G+ APAAMA V+ E L+LLR P+ LLLVAA + PH
Sbjct: 368 GD*APAAMAARGDVLDELLVLLRRPQAPPDLLLVAAGVAPH 490
Score = 44.1 bits (90), Expect = 0.007
Identities = 21/46 (45%), Positives = 23/46 (50%)
Frame = -3 / +3
Query: 394 SPASLGTELQQPWPCFVMXXXXXXXXXXXXXXXXXFCL*QQECLPI 257
+PA LGTELQQPWP VM FCL QQE P+
Sbjct: 354 APACLGTELQQPWPRVVMYLMSFSSSSGDHRPRRTFCLLQQEWRPM 491
Score = 34.5 bits (69), Expect(2) = 0.043
Identities = 20/42 (47%), Positives = 22/42 (52%)
Frame = +1 / -1
Query: 259 WGGILAATSRS*ERGSGPLRRMRNS*IT*QSMAMAAGALFPN 384
WG AATSR G RR R+S T AMAAGA P+
Sbjct: 489 WGATPAATSRRSGGACGRRRRTRSSSSTSPRAAMAAGAQSPD 364
Score = 29.9 bits (59), Expect(2) = 1e-006
Identities = 14/22 (63%), Positives = 15/22 (68%)
Frame = +1 / -1
Query: 391 GFKGAERVVG*GG*TI*GQTSR 456
G GA R G*GG T *G+TSR
Sbjct: 147 GCSGAARAAG*GGSTT*GRTSR 82
Score = 28.1 bits (55), Expect(2) = 0.043
Identities = 13/23 (56%), Positives = 17/23 (73%)
Frame = +2 / -2
Query: 374 CSQTRWASKVRKEL*AEVDKLSE 442
CS + A+ VR+EL AEVD+L E
Sbjct: 164 CSHSCRAAAVRQELQAEVDQLPE 96
>gb|BG273523.1|BG273523 OV2_26_G06.b1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA
sequence
Length = 356
Score = 174 bits (375), Expect = 4e-042
Identities = 64/79 (81%), Positives = 72/79 (91%)
Frame = +3 / +1
Query: 258 MGRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINY 437
MG HSCC KQK+R+GLWSPEEDEKL+ +IT HGHGCWSSVP+ AGLQRCGKSCRLRWINY
Sbjct: 118 MGHHSCCNKQKVRRGLWSPEEDEKLIKYITTHGHGCWSSVPRQAGLQRCGKSCRLRWINY 297
Query: 438 LRPDLKRGAFAQDEEDLII 494
LRPDLKRG+F+Q EE LI+
Sbjct: 298 LRPDLKRGSFSQQEEALIV 354
Score = 89.0 bits (188), Expect = 2e-016
Identities = 41/68 (60%), Positives = 42/68 (61%)
Frame = -3 / -1
Query: 460 PLLRSGLR*FIHLSLQLFPHL*SPASLGTELQQPWPCFVMXXXXXXXXXXXXXXXXXFCL 281
PLLRSGLR* IHLSLQL PH SPA LGTELQQPWPC VM FCL
Sbjct: 320 PLLRSGLR*LIHLSLQLLPHRCSPACLGTELQQPWPCVVMYLMSFSSSSGDHRPRRTFCL 141
Query: 280 *QQECLPI 257
QQE P+
Sbjct: 140 LQQEWCPM 117
Score = 88.1 bits (186), Expect = 4e-016
Identities = 42/79 (53%), Positives = 52/79 (65%)
Frame = -2 / -3
Query: 494 DDEVFFVLGECPSLEVWPQIVYPPQPTTLSAPLKPSEFGNRAPAAMAMLCYVIHEFLILL 315
DDE +L E LEV PQ+V PPQP L+APL+P G+ APAAMA+ V+ E L+LL
Sbjct: 354 DDEGLLLLREASPLEVRPQVVDPPQPAALAAPLQPCLSGD*APAAMAVRGDVLDELLVLL 175
Query: 314 RGPEPLSQLLLVAARMPPH 258
R P+ LLLVAA + PH
Sbjct: 174 RRPQAPPDLLLVAAGVVPH 118
Score = 68.4 bits (143), Expect = 4e-010
Identities = 33/61 (54%), Positives = 39/61 (63%)
Frame = +2 / +3
Query: 260 GEAFLLLQAEAEKGALVP*GG*ETHESHNKAWPWLLELCSQTRWASKVRKEL*AEVDKLS 439
G LL QAE G +V GG E H+ H+ A PWLLEL QT A+ VR+EL AEVD+L
Sbjct: 120 GAPLLLQQAEGPAGPVVAGGGREAHQVHHHARPWLLELSPQTSRAAAVRQELQAEVDQLP 299
Query: 440 E 442
E
Sbjct: 300 E 302
Score = 67.0 bits (140), Expect = 9e-010
Identities = 35/66 (53%), Positives = 39/66 (59%)
Frame = -1 / -2
Query: 456 S*GLASDSLSTSAYNSFRTFEAQRVWEQSSSSHGHALLCDS*VSHPPQGTRAPFSASACS 277
S*G AS S STSA +S RT A VW SSSSHG A C * S PP T P SAC
Sbjct: 316 S*GPASGS*STSACSSCRTAAALLVWGLSSSSHGRAW*CT**ASRPPPATTGPAGPSACC 137
Query: 276 SKNASP 259
S++ +P
Sbjct: 136 SRSGAP 119
Score = 59.7 bits (124), Expect = 1e-007
Identities = 34/66 (51%), Positives = 37/66 (56%)
Frame = +1 / +2
Query: 259 WGGILAATSRS*ERGSGPLRRMRNS*IT*QSMAMAAGALFPNSLGFKGAERVVG*GG*TI 438
WG AATSR G RR R+S T AMAAGA P+ G GA R G*GG T
Sbjct: 119 WGTTPAATSRRSGGACGRRRRTRSSSSTSPRTAMAAGAQSPDKQGCSGAARAAG*GGSTT 298
Query: 439 *GQTSR 456
*G+TSR
Sbjct: 299 *GRTSR 316
>gb|CN124196.1|CN124196 RHOH1_3_E09.b1_A002 Acid- and alkaline-treated roots Sorghum bicolor
cDNA clone RHOH1_3_E09_A002 3', mRNA sequence
Length = 763
Score = 105 bits (225), Expect(3) = 9e-042
Identities = 46/83 (55%), Positives = 54/83 (65%)
Frame = +3 / +2
Query: 1335 SFAETTTVMQNQSQTLYDDVIKAESQFNIEGICASWFXXXXXXXXXXVAPDMYDKDLQRM 1514
+F +T MQN SQ+LY+DVIKAESQFNIEG+CA+W V D+YDKDLQRM
Sbjct: 212 TFTDTPATMQNLSQSLYEDVIKAESQFNIEGLCAAWSQNLQPQQHLQVVSDLYDKDLQRM 391
Query: 1515 QLSFENI*ALCSTTWNRADQKKQ 1583
LSFENI*A C QK +
Sbjct: 392 SLSFENI*ATCCMQGTEK*QKAE 460
Score = 84.5 bits (178), Expect(2) = 1e-025
Identities = 42/70 (60%), Positives = 46/70 (65%)
Frame = -3 / -2
Query: 1552 VEHNA*IFSKDSCILCKSLSYMSGATXXXXXXX*FWNQEAHIPSMLNWLSALITSS*SVW 1373
++H A*IFSKD ILCKSLSY S T F +Q A PSMLNWLSALITSS S W
Sbjct: 429 MQHVA*IFSKDKDILCKSLSYKSDTTCRCCCGCRF*DQAAQRPSMLNWLSALITSSYSDW 250
Query: 1372 LWFCMTVVVS 1343
L FC+ VS
Sbjct: 249 LRFCIVAGVS 220
Score = 81.7 bits (172), Expect(3) = 9e-042
Identities = 31/68 (45%), Positives = 40/68 (58%)
Frame = +3 / +2
Query: 1152 FYWDGTNPXXXXXXXXXXXXXXXFEPQSTSTILENSVFPWTDIGQEKDTRAHLVAELKWP 1331
FYW+ NP FE QSTS++LE+SVFPWTD+ +K+++ HL ELKWP
Sbjct: 17 FYWETANPSSSSSRGSSGSNSLGFERQSTSSLLESSVFPWTDLTPDKNSQVHLEEELKWP 196
Query: 1332 DSFAETTT 1355
D T T
Sbjct: 197 DLLHGTFT 220
Score = 81.3 bits (171), Expect(2) = 7e-023
Identities = 37/65 (56%), Positives = 43/65 (66%)
Frame = +1 / +3
Query: 1354 QSCRTRAKRFMMM*SRQRANST*KGYVLLGSRISSHSNSCR*HQTCMTRTCKECNYLLRI 1533
Q CR A M S+ RANST*+ V G +I SHSN CR*+Q CMTR C+EC LLRI
Sbjct: 231 QRCRILASHCTKMLSKPRANST*RASVQPGLKICSHSNICR*YQICMTRICRECPCLLRI 410
Query: 1534 SRHYV 1548
SR +V
Sbjct: 411 SRQHV 425
Score = 71.6 bits (150), Expect(2) = 4e-018
Identities = 33/64 (51%), Positives = 38/64 (59%)
Frame = +2 / +1
Query: 1361 AEPEPNAL**CDQGREPIQHRRDMCFLVPESXXXXXXXGSTRHV*QGLAKNATIF*EYLG 1540
AE P + C Q REPIQHR +C LV +S GS R V*QG A+N +F*EYLG
Sbjct: 238 AES*PVTVRRCYQSREPIQHRGPLCSLVSKSAATATSAGSIRFV*QGFAENVLVF*EYLG 417
Query: 1541 IMFH 1552
M H
Sbjct: 418 NMLH 429
Score = 62.0 bits (129), Expect(2) = 3e-016
Identities = 32/65 (49%), Positives = 38/65 (58%)
Frame = -2 / -1
Query: 1547 T*CLDILKR*LHSLQVLVIHVWCYXXXXXXXXXLEPRSTYPFYVELALCLDHIIIKRLAL 1368
T CLDILKR HSLQ+LVI + Y L P T YVELAL D+I ++ LA
Sbjct: 424 TCCLDILKRQGHSLQILVIQI*YYLQMLLWLQILRPGCTEALYVELALGFDNIFVQ*LAK 245
Query: 1367 VLHDC 1353
+LH C
Sbjct: 244 ILHRC 230
Score = 61.6 bits (128), Expect(2) = 3e-015
Identities = 31/63 (49%), Positives = 36/63 (57%)
Frame = -1 / -3
Query: 1548 NIMPRYSQKIVAFFASPCHTCLVLPXXXXXXADSGTKKHISLLC*IGSLP*SHHHKAFGS 1369
N++PRYSQK F A+PCHT L+LP AD T+ H LC*IGS * H G
Sbjct: 425 NMLPRYSQKTRTFSANPCHTNLILPADVAVAADFETRLHRGPLC*IGSRL**HLRTVTG* 246
Query: 1368 GSA 1360
SA
Sbjct: 245 DSA 237
Score = 55.1 bits (114), Expect(2) = 1e-025
Identities = 27/48 (56%), Positives = 33/48 (68%)
Frame = -3 / -2
Query: 1360 MTVVVSAKESGHLSSATR*ALVSFSCPMSVHGKTLFSRIVLVLCGSNP 1217
++V V +SGHLSS++R* + S SVHGKTL SR LVLC SNP
Sbjct: 225 VSVNVPWSKSGHLSSSSR*TWLFLSGVKSVHGKTLLSRSELVLCRSNP 82
Score = 48.7 bits (100), Expect(2) = 7e-023
Identities = 21/42 (50%), Positives = 27/42 (64%)
Frame = +1 / +3
Query: 1210 TVWDLNHRARAQFWRTVSSHGQTLDKKKIQGLT**RNLSGLT 1335
T WDL+ +A+A FW+ V SHGQ + KI T +N SGLT
Sbjct: 75 TAWDLSGKAQAHFWKVVFSHGQI*HQIKIAKFTLRKNSSGLT 200
Score = 45.5 bits (93), Expect(2) = 3e-016
Identities = 23/44 (52%), Positives = 26/44 (59%)
Frame = -1 / -3
Query: 1347 FRQRSQAT*VPLLGEPLYLFLVQCLSMGRHCSPELCSCSVVQIP 1216
F SQAT*V GE Y +LV LSMG+H PE+ C QIP
Sbjct: 212 FHGASQAT*VLPQGELGYFYLVLNLSMGKHYFPEVSLCFAAQIP 81
Score = 42.8 bits (87), Expect(2) = 3e-015
Identities = 22/61 (36%), Positives = 27/61 (44%)
Frame = -2 / -1
Query: 1334 VRPLKFRY*VSPCIFFLSNVCPWEDTVLQNCARALWFKSHTVXXXXXXXXXXXXXXXXPV 1155
VRPL+F V+ IF +CPWE+T Q A AL KS V P+
Sbjct: 199 VRPLEFFLKVNLAIFIWC*ICPWENTTFQK*ACALPLKSQAVASAASSTAAAARISSFPI 20
Query: 1154 E 1152
E
Sbjct: 19 E 17
Score = 42.3 bits (86), Expect(2) = 4e-018
Identities = 23/48 (47%), Positives = 27/48 (56%)
Frame = +2 / +1
Query: 1217 GI*TTEHEHNSGEQCLPMDRHWTRKRYKGSPSSGT*VA*LLCRNDHSH 1360
GI* +H+ SG+ C PMDR TR + SP T VA*L N H H
Sbjct: 82 GI*AAKHKLTSGK*CFPMDRFNTR*K*PSSP*GRTQVA*LAPWNIHGH 225
Score = 24.0 bits (46), Expect(3) = 9e-042
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = +3 / +3
Query: 1650 DTEIILHSCSSVEELAISRK 1709
+TEI +CSSV++ A+ K
Sbjct: 549 ETEINTDNCSSVKDTAVHEK 608
>gb|CW496466.1|CW496466 fsbb001f288l19f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f288l19, DNA
sequence
Length = 597
Score = 133 bits (286), Expect(2) = 3e-041
Identities = 49/78 (62%), Positives = 61/78 (78%)
Frame = +3 / +1
Query: 291 LRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRGAFA 470
L++G W+PEEDE L + K G G W ++P+ AGL RCGKSCRLRW+NYLRPD+KRG A
Sbjct: 157 LKRGAWTPEEDELLSRAVAKEGEGRWRTLPRRAGLLRCGKSCRLRWMNYLRPDIKRGPIA 336
Query: 471 QDEEDLIIELHAVLGNRW 524
DEEDLI+ LH +LGNR+
Sbjct: 337 ADEEDLILRLHRLLGNRY 390
Score = 76.2 bits (160), Expect(2) = 2e-015
Identities = 32/80 (40%), Positives = 49/80 (61%)
Frame = -2 / -1
Query: 539 RCNLRPPVPEDSVQLDDEVFFVLGECPSLEVWPQIVYPPQPTTLSAPLKPSEFGNRAPAA 360
+C L PV E +V+ +DEV V G+ P+L+V P++V+PP+P L+A +P RAP
Sbjct: 405 QCTLDVPVAEQAVEAEDEVLLVGGDGPALDVRPEVVHPPEPAALAAAQQPRAARQRAPPP 226
Query: 359 MAMLCYVIHEFLILLRGPEP 300
+L + + L+LLR P P
Sbjct: 225 FPLLRHGPRQQLVLLRRPRP 166
Score = 57.9 bits (120), Expect(2) = 3e-041
Identities = 22/32 (68%), Positives = 26/32 (81%)
Frame = +3 / +2
Query: 522 WSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKG 617
WS IA +LPGRTDNEIKN WNS ++KKL +G
Sbjct: 500 WSLIAGRLPGRTDNEIKNYWNSHLRKKLIARG 595
Score = 46.9 bits (96), Expect(2) = 2e-010
Identities = 23/41 (56%), Positives = 25/41 (60%)
Frame = -3 / -2
Query: 469 ANAPLLRSGLR*FIHLSLQLFPHL*SPASLGTELQQPWPCF 347
A P L SGLR*FIH SLQL P SPA G+ +P P F
Sbjct: 335 AMGPRLMSGLR*FIHRSLQLLPQRSSPARRGSVRHRPSPSF 213
Score = 44.1 bits (90), Expect(2) = 2e-010
Identities = 22/38 (57%), Positives = 24/38 (63%)
Frame = -3 / -1
Query: 619 MPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRT 506
MP +SF EF FLISLSV PGS AI DH+ RT
Sbjct: 597 MPRAMSFLRRCEFQ*FLISLSVRPGSRPAISDHVHART 484
Score = 28.6 bits (56), Expect(2) = 2e-015
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = -2 / -3
Query: 605 QLLLDARVP*ILDLIISPPWQLRCNLRP 522
+LL + RVP +LDL++ P Q + RP
Sbjct: 583 ELLAEVRVPVVLDLVVRSPRQPPGDQRP 500
>gb|AF470066.1| Sorghum bicolor P-type R2R3 Myb protein (Myb27) gene, partial cds
Length = 1314
Score = 99.1 bits (210), Expect(3) = 4e-041
Identities = 36/44 (81%), Positives = 43/44 (97%)
Frame = +3 / +2
Query: 390 GLQRCGKSCRLRWINYLRPDLKRGAFAQDEEDLIIELHAVLGNR 521
GL+RCGKSCRLRWINYLRPDLKRGAF+Q+EEDLII LH+++GN+
Sbjct: 974 GLERCGKSCRLRWINYLRPDLKRGAFSQEEEDLIIHLHSMMGNK 1105
Score = 90.4 bits (191), Expect(3) = 4e-041
Identities = 33/46 (71%), Positives = 40/46 (86%)
Frame = +3 / +1
Query: 258 MGRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGL 395
M R + K+KLR+GLWSPEED+KL+NHI K+GHGCWSSVPKLAG+
Sbjct: 607 MARRTSGPKKKLRRGLWSPEEDDKLINHIAKYGHGCWSSVPKLAGI 744
Score = 53.3 bits (110), Expect(3) = 1e-015
Identities = 23/26 (88%), Positives = 23/26 (88%)
Frame = -3 / -1
Query: 466 NAPLLRSGLR*FIHLSLQLFPHL*SP 389
NAPLLRSGLR* IHLSLQLFPHL P
Sbjct: 1050 NAPLLRSGLR*LIHLSLQLFPHLSRP 973
Score = 51.9 bits (107), Expect(3) = 1e-013
Identities = 21/41 (51%), Positives = 25/41 (60%)
Frame = -2 / -3
Query: 518 VPEDSVQLDDEVFFVLGECPSLEVWPQIVYPPQPTTLSAPL 396
V +++DDEV L EC LEV PQ+V PPQP L PL
Sbjct: 1102 VAHHGMEMDDEVLLFLRECSPLEVRPQVVDPPQPAALPTPL 980
Score = 48.7 bits (100), Expect(3) = 1e-015
Identities = 23/41 (56%), Positives = 28/41 (68%)
Frame = -2 / -1
Query: 380 GNRAPAAMAMLCYVIHEFLILLRGPEPLSQLLLVAARMPPH 258
G+ PAAMA+L V+ E ++LLR PE QLLL AAR P H
Sbjct: 729 GDGTPAAMAILGNVVDELVVLLRRPEAPPQLLLGAARPPRH 607
Score = 48.3 bits (99), Expect(2) = 2e-006
Identities = 21/41 (51%), Positives = 25/41 (60%)
Frame = +2 / +3
Query: 260 GEAFLLLQAEAEKGALVP*GG*ETHESHNKAWPWLLELCSQ 382
GEA Q EAE+G LV GG + H+ H + WPWLLE Q
Sbjct: 609 GEADERPQEEAEEGPLVAGGGRQAHQPHCQVWPWLLEFRPQ 731
Score = 48.3 bits (99), Expect(3) = 1e-013
Identities = 20/41 (48%), Positives = 24/41 (58%)
Frame = -1 / -3
Query: 381 WEQSSSSHGHALLCDS*VSHPPQGTRAPFSASACSSKNASP 259
W ++SSSHGH C * PP TR P SAS+ +ASP
Sbjct: 730 WGRNSSSHGHTWQCG**ACRPPPATRGPSSASSWGRSSASP 608
Score = 38.2 bits (77), Expect = 0.45
Identities = 14/17 (82%), Positives = 14/17 (82%)
Frame = -3 / -2
Query: 391 PASLGTELQQPWPCFVM 341
PASLGTELQQPWP M
Sbjct: 740 PASLGTELQQPWPYLAM 690
Score = 35.0 bits (70), Expect = 4.2
Identities = 21/42 (50%), Positives = 23/42 (54%)
Frame = +1 / +2
Query: 259 WGGILAATSRS*ERGSGPLRRMRNS*IT*QSMAMAAGALFPN 384
W G AA RS* SG RR +S T SMAMAAG P+
Sbjct: 608 WRGGRAAPRRS*GGASGRRRRTTSSSTTLPSMAMAAGVPSPS 733
Score = 30.4 bits (60), Expect(2) = 2e-006
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = +1 / +3
Query: 397 KGAERVVG*GG*TI*GQTSREGHS 468
+G R G*GG T *G+TSR HS
Sbjct: 981 RGVGRAAG*GGSTT*GRTSRGEHS 1052
Score = 28.6 bits (56), Expect(3) = 1e-015
Identities = 9/16 (56%), Positives = 13/16 (81%)
Frame = -2 / -1
Query: 572 LDLIISPPWQLRCNLR 525
L L++ PP QLRCN++
Sbjct: 1272 LTLVVRPPRQLRCNMK 1225
Score = 28.1 bits (55), Expect(3) = 4e-041
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = +3 / +1
Query: 531 IAAQLPGRTDNEIKNL 578
IA QLPGRTDN+ + L
Sbjct: 1231 IATQLPGRTDNQGQEL 1278
Score = 23.5 bits (45), Expect(3) = 1e-013
Identities = 10/12 (83%), Positives = 10/12 (83%)
Frame = -3 / -2
Query: 562 LSVLPGSCAAI* 527
LSV PGSC AI*
Sbjct: 1262 LSVRPGSCVAI* 1227
>gb|CW114914.1|CW114914 104_489_11106252_148_34566_034 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11106252, DNA
sequence
Length = 496
Score = 156 bits (336), Expect(2) = 5e-041
Identities = 58/90 (64%), Positives = 69/90 (76%)
Frame = +3 / -3
Query: 252 VEMGRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWI 431
V MGR CC K KG W+ EEDE+L+ +I HG GCW S+PK AGL RCGKSCRLRW+
Sbjct: 470 VAMGRSPCCEKAHTNKGAWTKEEDERLVAYIRAHGEGCWRSLPKAAGLPRCGKSCRLRWM 291
Query: 432 NYLRPDLKRGAFAQDEEDLIIELHAVLGNR 521
NYLRPDLKRG F DE++LII LH++LGN+
Sbjct: 290 NYLRPDLKRGNFTDDEDELIIRLHSLLGNK 201
Score = 90.9 bits (192), Expect(2) = 2e-019
Identities = 40/87 (45%), Positives = 56/87 (64%)
Frame = -2 / +3
Query: 518 VPEDSVQLDDEVFFVLGECPSLEVWPQIVYPPQPTTLSAPLKPSEFGNRAPAAMAMLCYV 339
V E++VQ DDE+ V+GE +LEV ++V+PPQP L+A + G RAPA + V
Sbjct: 204 VAEEAVQADDELVLVVGEVAALEVRAEVVHPPQPAALAAARQARRLGQRAPAPFPVRPDV 383
Query: 338 IHEFLILLRGPEPLSQLLLVAARMPPH 258
H+ L+LL GP L ++ L+AAR PPH
Sbjct: 384 RHQPLVLLLGPRALVRVRLLAARRPPH 464
Score = 64.8 bits (135), Expect = 5e-009
Identities = 30/58 (51%), Positives = 32/58 (55%)
Frame = -3 / +1
Query: 523 HLFPRTACXXXXXXXXSWANAPLLRSGLR*FIHLSLQLFPHL*SPASLGTELQQPWPC 350
HL PR C S P LRSG R*FIH SLQL P PA+LG+E Q P PC
Sbjct: 199 HLLPRRLCRRMMSSSSSSVKLPRLRSGRR*FIHRSLQLLPQRGRPAALGSERQHPSPC 372
Score = 37.3 bits (75), Expect(2) = 5e-041
Identities = 14/16 (87%), Positives = 14/16 (87%)
Frame = +3 / -2
Query: 519 RWSQIAAQLPGRTDNE 566
RWS IA QLPGRTDNE
Sbjct: 48 RWSLIAGQLPGRTDNE 1
Score = 30.9 bits (61), Expect(2) = 2e-019
Identities = 13/16 (81%), Positives = 13/16 (81%)
Frame = -3 / +2
Query: 565 SLSVLPGSCAAI*DHL 518
SLSV PGSC AI DHL
Sbjct: 2 SLSVRPGSCPAIRDHL 49
>gb|CW041910.1|CW041910 104_275_10506824_115_30285 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10506824, DNA
sequence
Length = 625
Score = 170 bits (365), Expect = 9e-041
Identities = 66/91 (72%), Positives = 78/91 (85%)
Frame = +3 / +1
Query: 378 PKLAGLQRCGKSCRLRWINYLRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRT 557
P AGL RCGKSCRLRW NYLRPDLKRG +++EE L+I+LHA LGNRWS+IAA+LPGRT
Sbjct: 55 PHPAGLLRCGKSCRLRWTNYLRPDLKRGLLSEEEEALVIDLHAQLGNRWSKIAARLPGRT 234
Query: 558 DNEIKNLWNSCIKKKLRQKGIDPNTHKPLTE 650
DNEIKN WN+ IKKKL++ GIDP TH+PL +
Sbjct: 235 DNEIKNHWNTHIKKKLKKMGIDPVTHRPLAQ 327
Score = 112 bits (239), Expect = 2e-023
Identities = 56/93 (60%), Positives = 58/93 (62%)
Frame = -3 / -3
Query: 643 SGLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWAN 464
SG WV GSMP LSFFLM F FLISLSVLPGS AAI DH P A S
Sbjct: 320 SGRWVTGSMPIFLSFFLMWVFQWFLISLSVLPGSRAAILDHRLPSCAWRSMTSASSSSER 141
Query: 463 APLLRSGLR*FIHLSLQLFPHL*SPASLGTELQ 365
PLLRSGLR* +H S QLFPHL SPA G + Q
Sbjct: 140 RPLLRSGLR*LVHRSRQLFPHLSSPAG*GRKRQ 42
Score = 91.3 bits (193), Expect = 5e-017
Identities = 41/82 (50%), Positives = 55/82 (67%)
Frame = -2 / -2
Query: 635 VGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECPS 456
VG G++A L +LLLD VP +LDL++ PP + R +L PPV E V++DD+ +L E
Sbjct: 312 VGDGVDAHLLELLLDVGVPVVLDLVVRPPGEPRRDLGPPVAELRVEVDDQRLLLLREEAP 133
Query: 455 LEVWPQIVYPPQPTTLSAPLKP 390
LEV PQ+V PPQP L AP +P
Sbjct: 132 LEVRPQVVGPPQPAALPAPQQP 67
Score = 49.6 bits (102), Expect(2) = 1e-004
Identities = 30/79 (37%), Positives = 33/79 (41%)
Frame = +1 / +2
Query: 400 GAERVVG*GG*TI*GQTSREGHSPXXXXXXXXXXXXXXXXXXXXXQRSCQGGLIMRSRIY 579
GA R G GG T *G+TSR S +R GG RSR
Sbjct: 77 GAGRAAGCGGPTT*GRTSRGASSRRRRRRWSSTSTRSSATGGPRSRRGSPGGRTTRSRTT 256
Query: 580 GTRASRRS*GRKALIPTPT 636
GT SRRS R A P+PT
Sbjct: 257 GTPTSRRSSRRWASTPSPT 313
Score = 41.8 bits (85), Expect = 0.036
Identities = 20/42 (47%), Positives = 26/42 (61%)
Frame = +2 / +3
Query: 515 EQVVSNCSAAARED***DQESMELVHQEEAEAERH*SQHPQA 640
+ VV + AA RED DQE +E HQEEA+ + H +HP A
Sbjct: 192 QPVVQDRGAAPREDGQRDQEPLEHPHQEEAQEDGHRPRHPPA 317
Score = 22.1 bits (42), Expect(2) = 1e-004
Identities = 8/15 (53%), Positives = 8/15 (53%)
Frame = +1 / +2
Query: 673 PPSAPREPQGPATST 717
PP APR P P T
Sbjct: 569 PPRAPRPPPRPRART 613
>gb|CW269199.1|CW269199 104_740_11401724_116_36231_076 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11401724, DNA
sequence
Length = 658
Score = 170 bits (365), Expect = 9e-041
Identities = 66/91 (72%), Positives = 78/91 (85%)
Frame = +3 / -3
Query: 378 PKLAGLQRCGKSCRLRWINYLRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRT 557
P AGL RCGKSCRLRW NYLRPDLKRG +++EE L+I+LHA LGNRWS+IAA+LPGRT
Sbjct: 602 PHPAGLLRCGKSCRLRWTNYLRPDLKRGLLSEEEEALVIDLHAQLGNRWSKIAARLPGRT 423
Query: 558 DNEIKNLWNSCIKKKLRQKGIDPNTHKPLTE 650
DNEIKN WN+ IKKKL++ GIDP TH+PL +
Sbjct: 422 DNEIKNHWNTHIKKKLKKMGIDPVTHRPLAQ 330
Score = 112 bits (239), Expect = 2e-023
Identities = 56/93 (60%), Positives = 58/93 (62%)
Frame = -3 / +1
Query: 643 SGLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWAN 464
SG WV GSMP LSFFLM F FLISLSVLPGS AAI DH P A S
Sbjct: 337 SGRWVTGSMPIFLSFFLMWVFQWFLISLSVLPGSRAAILDHRLPSCAWRSMTSASSSSER 516
Query: 463 APLLRSGLR*FIHLSLQLFPHL*SPASLGTELQ 365
PLLRSGLR* +H S QLFPHL SPA G + Q
Sbjct: 517 RPLLRSGLR*LVHRSRQLFPHLSSPAG*GRKRQ 615
Score = 91.3 bits (193), Expect = 5e-017
Identities = 41/82 (50%), Positives = 55/82 (67%)
Frame = -2 / +3
Query: 635 VGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECPS 456
VG G++A L +LLLD VP +LDL++ PP + R +L PPV E V++DD+ +L E
Sbjct: 345 VGDGVDAHLLELLLDVGVPVVLDLVVRPPGEPRRDLGPPVAELRVEVDDQRLLLLREEAP 524
Query: 455 LEVWPQIVYPPQPTTLSAPLKP 390
LEV PQ+V PPQP L AP +P
Sbjct: 525 LEVRPQVVGPPQPAALPAPQQP 590
Score = 49.6 bits (102), Expect(2) = 1e-004
Identities = 30/79 (37%), Positives = 33/79 (41%)
Frame = +1 / -1
Query: 400 GAERVVG*GG*TI*GQTSREGHSPXXXXXXXXXXXXXXXXXXXXXQRSCQGGLIMRSRIY 579
GA R G GG T *G+TSR S +R GG RSR
Sbjct: 580 GAGRAAGCGGPTT*GRTSRGASSRRRRRRWSSTSTRSSATGGPRSRRGSPGGRTTRSRTT 401
Query: 580 GTRASRRS*GRKALIPTPT 636
GT SRRS R A P+PT
Sbjct: 400 GTPTSRRSSRRWASTPSPT 344
Score = 41.8 bits (85), Expect = 0.036
Identities = 20/42 (47%), Positives = 26/42 (61%)
Frame = +2 / -2
Query: 515 EQVVSNCSAAARED***DQESMELVHQEEAEAERH*SQHPQA 640
+ VV + AA RED DQE +E HQEEA+ + H +HP A
Sbjct: 465 QPVVQDRGAAPREDGQRDQEPLEHPHQEEAQEDGHRPRHPPA 340
Score = 22.1 bits (42), Expect(2) = 1e-004
Identities = 8/15 (53%), Positives = 8/15 (53%)
Frame = +1 / -1
Query: 673 PPSAPREPQGPATST 717
PP APR P P T
Sbjct: 88 PPRAPRPPPRPRART 44
>gb|BE356993.1|BE356993 DG1_146_C10.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 531
Score = 168 bits (361), Expect = 3e-040
Identities = 64/92 (69%), Positives = 77/92 (83%)
Frame = +3 / +2
Query: 330 LMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRGAFAQDEEDLIIELHAV 509
L+NHI GH W ++PK AGL RCGKSCRLRWINYLRPD+KRG F+++EED II LH
Sbjct: 8 LVNHIQSFGHSNWRALPKQAGLLRCGKSCRLRWINYLRPDIKRGNFSKEEEDAIITLHEQ 187
Query: 510 LGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKL 605
LGNRWS IAA+LPGRTDNEIKN+W++ +KK+L
Sbjct: 188 LGNRWSAIAARLPGRTDNEIKNVWHTHLKKRL 283
Score = 89.5 bits (189), Expect = 2e-016
Identities = 42/94 (44%), Positives = 58/94 (61%)
Frame = -2 / -3
Query: 605 QLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECPSLEVWPQIVYP 426
Q LL+ RVP +LDL++ PP Q + PPV E V+ DD V F+L E +L+V Q+V P
Sbjct: 283 QPLLEVRVPDVLDLVVRPPGQPGGDRGPPVAELLVEGDDGVLFLLAEVAALDVRAQVVDP 104
Query: 425 PQPTTLSAPLKPSEFGNRAPAAMAMLCYVIHEFL 324
P+P L+AP +P G RAP A+A V+ + L
Sbjct: 103 PEPAALAAPQQPGLLGQRAPVAVAEALDVVDQDL 2
Score = 76.2 bits (160), Expect = 2e-012
Identities = 42/84 (50%), Positives = 44/84 (52%)
Frame = -3 / -1
Query: 604 SFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANAPLLRSGLR*FIH 425
S FL FLISLSV PGS AAI DHL P + S P L SG R* IH
Sbjct: 282 SRFLRCVCQTFLISLSVRPGSLAAIADHLLPSCSWRVMMASSSSLLKLPRLMSGRR*LIH 103
Query: 424 LSLQLFPHL*SPASLGTELQQPWP 353
S QL PH SPA LG+ Q WP
Sbjct: 102 RSRQLLPHRSSPACLGSARQLLWP 31
>gb|BE357013.1|BE357013 DG1_146_C11.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 530
Score = 168 bits (361), Expect = 3e-040
Identities = 64/92 (69%), Positives = 77/92 (83%)
Frame = +3 / +2
Query: 330 LMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRGAFAQDEEDLIIELHAV 509
L+NHI GH W ++PK AGL RCGKSCRLRWINYLRPD+KRG F+++EED II LH
Sbjct: 8 LVNHIQSFGHSNWRALPKQAGLLRCGKSCRLRWINYLRPDIKRGNFSKEEEDAIITLHEQ 187
Query: 510 LGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKL 605
LGNRWS IAA+LPGRTDNEIKN+W++ +KK+L
Sbjct: 188 LGNRWSAIAARLPGRTDNEIKNVWHTHLKKRL 283
Score = 89.5 bits (189), Expect = 2e-016
Identities = 42/94 (44%), Positives = 58/94 (61%)
Frame = -2 / -2
Query: 605 QLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECPSLEVWPQIVYP 426
Q LL+ RVP +LDL++ PP Q + PPV E V+ DD V F+L E +L+V Q+V P
Sbjct: 283 QPLLEVRVPDVLDLVVRPPGQPGGDRGPPVAELLVEGDDGVLFLLAEVAALDVRAQVVDP 104
Query: 425 PQPTTLSAPLKPSEFGNRAPAAMAMLCYVIHEFL 324
P+P L+AP +P G RAP A+A V+ + L
Sbjct: 103 PEPAALAAPQQPGLLGQRAPVAVAEALDVVDQDL 2
Score = 76.2 bits (160), Expect = 2e-012
Identities = 42/84 (50%), Positives = 44/84 (52%)
Frame = -3 / -3
Query: 604 SFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANAPLLRSGLR*FIH 425
S FL FLISLSV PGS AAI DHL P + S P L SG R* IH
Sbjct: 282 SRFLRCVCQTFLISLSVRPGSLAAIADHLLPSCSWRVMMASSSSLLKLPRLMSGRR*LIH 103
Query: 424 LSLQLFPHL*SPASLGTELQQPWP 353
S QL PH SPA LG+ Q WP
Sbjct: 102 RSRQLLPHRSSPACLGSARQLLWP 31
>gb|CD232235.1|CD232235 SS1_39_E09.b1_A012 Salt-stressed seedlings Sorghum bicolor cDNA clone
SS1_39_E09_A012 3', mRNA sequence
Length = 608
Score = 105 bits (225), Expect(2) = 5e-040
Identities = 46/83 (55%), Positives = 54/83 (65%)
Frame = +3 / +1
Query: 1335 SFAETTTVMQNQSQTLYDDVIKAESQFNIEGICASWFXXXXXXXXXXVAPDMYDKDLQRM 1514
+F +T MQN SQ+LY+DVIKAESQFNIEG+CA+W V D+YDKDLQRM
Sbjct: 223 TFTDTPATMQNLSQSLYEDVIKAESQFNIEGLCAAWSQNLQPQQHLQVVSDLYDKDLQRM 402
Query: 1515 QLSFENI*ALCSTTWNRADQKKQ 1583
LSFENI*A C QK +
Sbjct: 403 SLSFENI*ATCCMQGTEK*QKAE 471
Score = 84.5 bits (178), Expect(2) = 1e-025
Identities = 42/70 (60%), Positives = 46/70 (65%)
Frame = -3 / -1
Query: 1552 VEHNA*IFSKDSCILCKSLSYMSGATXXXXXXX*FWNQEAHIPSMLNWLSALITSS*SVW 1373
++H A*IFSKD ILCKSLSY S T F +Q A PSMLNWLSALITSS S W
Sbjct: 440 MQHVA*IFSKDKDILCKSLSYKSDTTCRCCCGCRF*DQAAQRPSMLNWLSALITSSYSDW 261
Query: 1372 LWFCMTVVVS 1343
L FC+ VS
Sbjct: 260 LRFCIVAGVS 231
Score = 81.7 bits (172), Expect(2) = 5e-040
Identities = 31/68 (45%), Positives = 40/68 (58%)
Frame = +3 / +1
Query: 1152 FYWDGTNPXXXXXXXXXXXXXXXFEPQSTSTILENSVFPWTDIGQEKDTRAHLVAELKWP 1331
FYW+ NP FE QSTS++LE+SVFPWTD+ +K+++ HL ELKWP
Sbjct: 28 FYWETANPSSSSSRGSSGSNSLGFERQSTSSLLESSVFPWTDLTPDKNSQVHLEEELKWP 207
Query: 1332 DSFAETTT 1355
D T T
Sbjct: 208 DLLHGTFT 231
Score = 81.3 bits (171), Expect(2) = 7e-023
Identities = 37/65 (56%), Positives = 43/65 (66%)
Frame = +1 / +2
Query: 1354 QSCRTRAKRFMMM*SRQRANST*KGYVLLGSRISSHSNSCR*HQTCMTRTCKECNYLLRI 1533
Q CR A M S+ RANST*+ V G +I SHSN CR*+Q CMTR C+EC LLRI
Sbjct: 242 QRCRILASHCTKMLSKPRANST*RASVQPGLKICSHSNICR*YQICMTRICRECPCLLRI 421
Query: 1534 SRHYV 1548
SR +V
Sbjct: 422 SRQHV 436
Score = 71.6 bits (150), Expect(2) = 4e-018
Identities = 33/64 (51%), Positives = 38/64 (59%)
Frame = +2 / +3
Query: 1361 AEPEPNAL**CDQGREPIQHRRDMCFLVPESXXXXXXXGSTRHV*QGLAKNATIF*EYLG 1540
AE P + C Q REPIQHR +C LV +S GS R V*QG A+N +F*EYLG
Sbjct: 249 AES*PVTVRRCYQSREPIQHRGPLCSLVSKSAATATSAGSIRFV*QGFAENVLVF*EYLG 428
Query: 1541 IMFH 1552
M H
Sbjct: 429 NMLH 440
Score = 62.0 bits (129), Expect(2) = 3e-016
Identities = 32/65 (49%), Positives = 38/65 (58%)
Frame = -2 / -3
Query: 1547 T*CLDILKR*LHSLQVLVIHVWCYXXXXXXXXXLEPRSTYPFYVELALCLDHIIIKRLAL 1368
T CLDILKR HSLQ+LVI + Y L P T YVELAL D+I ++ LA
Sbjct: 435 TCCLDILKRQGHSLQILVIQI*YYLQMLLWLQILRPGCTEALYVELALGFDNIFVQ*LAK 256
Query: 1367 VLHDC 1353
+LH C
Sbjct: 255 ILHRC 241
Score = 61.6 bits (128), Expect(2) = 3e-015
Identities = 31/63 (49%), Positives = 36/63 (57%)
Frame = -1 / -2
Query: 1548 NIMPRYSQKIVAFFASPCHTCLVLPXXXXXXADSGTKKHISLLC*IGSLP*SHHHKAFGS 1369
N++PRYSQK F A+PCHT L+LP AD T+ H LC*IGS * H G
Sbjct: 436 NMLPRYSQKTRTFSANPCHTNLILPADVAVAADFETRLHRGPLC*IGSRL**HLRTVTG* 257
Query: 1368 GSA 1360
SA
Sbjct: 256 DSA 248
Score = 55.1 bits (114), Expect(2) = 1e-025
Identities = 27/48 (56%), Positives = 33/48 (68%)
Frame = -3 / -1
Query: 1360 MTVVVSAKESGHLSSATR*ALVSFSCPMSVHGKTLFSRIVLVLCGSNP 1217
++V V +SGHLSS++R* + S SVHGKTL SR LVLC SNP
Sbjct: 236 VSVNVPWSKSGHLSSSSR*TWLFLSGVKSVHGKTLLSRSELVLCRSNP 93
Score = 48.7 bits (100), Expect(2) = 7e-023
Identities = 21/42 (50%), Positives = 27/42 (64%)
Frame = +1 / +2
Query: 1210 TVWDLNHRARAQFWRTVSSHGQTLDKKKIQGLT**RNLSGLT 1335
T WDL+ +A+A FW+ V SHGQ + KI T +N SGLT
Sbjct: 86 TAWDLSGKAQAHFWKVVFSHGQI*HQIKIAKFTLRKNSSGLT 211
Score = 45.5 bits (93), Expect(2) = 3e-016
Identities = 23/44 (52%), Positives = 26/44 (59%)
Frame = -1 / -2
Query: 1347 FRQRSQAT*VPLLGEPLYLFLVQCLSMGRHCSPELCSCSVVQIP 1216
F SQAT*V GE Y +LV LSMG+H PE+ C QIP
Sbjct: 223 FHGASQAT*VLPQGELGYFYLVLNLSMGKHYFPEVSLCFAAQIP 92
Score = 42.8 bits (87), Expect(2) = 3e-015
Identities = 22/61 (36%), Positives = 27/61 (44%)
Frame = -2 / -3
Query: 1334 VRPLKFRY*VSPCIFFLSNVCPWEDTVLQNCARALWFKSHTVXXXXXXXXXXXXXXXXPV 1155
VRPL+F V+ IF +CPWE+T Q A AL KS V P+
Sbjct: 210 VRPLEFFLKVNLAIFIWC*ICPWENTTFQK*ACALPLKSQAVASAASSTAAAARISSFPI 31
Query: 1154 E 1152
E
Sbjct: 30 E 28
Score = 42.3 bits (86), Expect(2) = 4e-018
Identities = 23/48 (47%), Positives = 27/48 (56%)
Frame = +2 / +3
Query: 1217 GI*TTEHEHNSGEQCLPMDRHWTRKRYKGSPSSGT*VA*LLCRNDHSH 1360
GI* +H+ SG+ C PMDR TR + SP T VA*L N H H
Sbjct: 93 GI*AAKHKLTSGK*CFPMDRFNTR*K*PSSP*GRTQVA*LAPWNIHGH 236
>gb|CX617423.1|CX617423 GABR1_33_D11.g1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_33_D11_A002 5', mRNA sequence
Length = 714
Score = 167 bits (359), Expect = 6e-040
Identities = 64/114 (56%), Positives = 84/114 (73%)
Frame = +3 / +2
Query: 291 LRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRGAFA 470
LR+G W+ EED L+N++ HG G W+++ + AGL+R GKSCRLRW+NYLRPDL+RG
Sbjct: 218 LRRGPWTVEEDMLLVNYVAAHGEGRWNALARCAGLRRTGKSCRLRWLNYLRPDLRRGNIT 397
Query: 471 QDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPNT 632
E+ LI+ELH+ GNRWS+IA LPGRTDNEIKN W + ++K RQ D N+
Sbjct: 398 AQEQLLILELHSRWGNRWSKIAQHLPGRTDNEIKNYWRTRVQKHARQLNCDVNS 559
Score = 87.2 bits (184), Expect = 8e-016
Identities = 41/116 (35%), Positives = 64/116 (55%)
Frame = -2 / -3
Query: 635 VGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECPS 456
+ V + LP +LL R P +LDL++ P ++ +L PPV VQL DE + +
Sbjct: 562 LAVDVAVELPGVLLHPRAPVVLDLVVGAPREVLRDLGPPVAPPRVQLQDEQLLLRRDVAP 383
Query: 455 LEVWPQIVYPPQPTTLSAPLKPSEFGNRAPAAMAMLCYVIHEFLILLRGPEPLSQL 288
+V PQ+V PPQP L+ P +P R PA++A+ V+ E +LL P P +++
Sbjct: 382 PQVRPQVVEPPQPAALARPPEPCASCQRVPASLAVRGDVVDEEHVLLHRPRPAAEV 215
Score = 76.2 bits (160), Expect = 2e-012
Identities = 40/95 (42%), Positives = 44/95 (46%)
Frame = -3 / -1
Query: 634 WVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANAPL 455
W+L S CL+ F FLISLSV PG C AI DH P C P
Sbjct: 561 WLLTSQLSCLACFCTRVRQ*FLISLSVRPGRCCAILDHRLPHRECSSRMSSCSCAVMLPR 382
Query: 454 LRSGLR*FIHLSLQLFPHL*SPASLGTELQQPWPC 350
RSG R* H S QL P SPA + Q+P PC
Sbjct: 381 RRSGRR*LSHRSRQLLPVRRSPAHRASAFQRPSPC 277
>gb|CW124122.1|CW124122 104_503_11111597_148_34693_019 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11111597, DNA
sequence
Length = 624
Score = 127 bits (271), Expect(2) = 7e-040
Identities = 50/73 (68%), Positives = 60/73 (82%)
Frame = +3 / +3
Query: 387 AGLQRCGKSCRLRWINYLRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNE 566
AGL+R GKSCRLRW+NYLRPDLK+ ++ EE+ II L LGNRWS IAA++PGRTDNE
Sbjct: 366 AGLRRSGKSCRLRWMNYLRPDLKKEPISKREEETIISLQQSLGNRWSTIAARMPGRTDNE 545
Query: 567 IKNLWNSCIKKKL 605
IKN WNS I+K+L
Sbjct: 546 IKNYWNSRIRKRL 584
Score = 77.6 bits (163), Expect = 6e-013
Identities = 40/71 (56%), Positives = 40/71 (56%)
Frame = -3 / -3
Query: 598 FLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANAPLLRSGLR*FIHLS 419
FLM EF FLISLSVLPG AAI DH P C LRSG R*FIH S
Sbjct: 577 FLMREFQ*FLISLSVLPGILAAIVDHRLPSDCCKEMMVSSSRLEMGSFLRSGRR*FIHRS 398
Query: 418 LQLFPHL*SPA 386
LQL P L SPA
Sbjct: 397 LQLLPLLRSPA 365
Score = 70.7 bits (148), Expect = 7e-011
Identities = 33/75 (44%), Positives = 46/75 (61%)
Frame = -2 / -2
Query: 605 QLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECPSLEVWPQIVYP 426
+ L DA VP +LDL++ P R + RPPV + +Q DD + LG+ LEV Q+V+P
Sbjct: 584 EALPDA*VPVVLDLVVRPARHPRRDRRPPVAKRLLQGDDGLLLALGDGLLLEVRAQVVHP 405
Query: 425 PQPTTLSAPLKPSEF 381
PQP L+AP +P F
Sbjct: 404 PQPAALAAPPQPCTF 360
Score = 60.2 bits (125), Expect(2) = 7e-040
Identities = 24/35 (68%), Positives = 26/35 (74%)
Frame = +3 / +2
Query: 288 KLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAG 392
K RKGLWSPEEDE+L IT HG WSSV +LAG
Sbjct: 167 KERKGLWSPEEDERLFTQITYHGVSTWSSVAQLAG 271
Score = 44.1 bits (90), Expect = 0.007
Identities = 25/71 (35%), Positives = 28/71 (39%)
Frame = +1 / +1
Query: 382 NSLGFKGAERVVG*GG*TI*GQTSREGHSPXXXXXXXXXXXXXXXXXXXXXQRSCQGGLI 561
N G GA R G GG*T +TSR SP +R C+ G
Sbjct: 361 NVQGCGGAARAAGCGG*TTCARTSRRSPSPSARRRPSSPCSSRLATGGRRSRRGCRAGRT 540
Query: 562 MRSRIYGTRAS 594
RSR GT AS
Sbjct: 541 TRSRTTGTHAS 573
>gb|BG560270.1|BG560270 RHIZ2_72_B10.b1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 528
Score = 135 bits (289), Expect(2) = 9e-040
Identities = 47/81 (58%), Positives = 67/81 (82%)
Frame = +3 / +1
Query: 360 GCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAA 539
G W ++P+ AGL RCGKSCRLRW+NYLRPD+K G + ++E+ +I L++ +G+RWS IA+
Sbjct: 238 GNWIALPQKAGLNRCGKSCRLRWLNYLRPDIKHGGYTEEEDRIIWSLYSSIGSRWSIIAS 417
Query: 540 QLPGRTDNEIKNLWNSCIKKK 602
+LPGRTDN++KN WN+ +KKK
Sbjct: 418 KLPGRTDNDVKNYWNTKLKKK 480
Score = 73.9 bits (155), Expect(2) = 7e-015
Identities = 34/98 (34%), Positives = 55/98 (56%)
Frame = -2 / -1
Query: 602 LLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECPSLEVWPQIVYPP 423
LLL+ VP +LD+++ P +L + PP + +V+ D+ +LG P L+V PQ+V PP
Sbjct: 480 LLLELGVPVVLDVVVGPARELGRDDGPPAADGAVERPDDPVLLLGVAPVLDVRPQVVEPP 301
Query: 422 QPTTLSAPLKPSEFGNRAPAAMAMLCYVIHEFLILLRG 309
QP L+AP++P P A + + L++L G
Sbjct: 300 QPAALAAPVQPCFLRQGDPVAADAVALDVAPQLLVLLG 187
Score = 51.5 bits (106), Expect(2) = 9e-040
Identities = 17/36 (47%), Positives = 27/36 (75%)
Frame = +3 / +1
Query: 255 EMGRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHG 362
+MGR CC K +++G WSPEEDE+L +++ ++G G
Sbjct: 130 DMGRAPCCDKASVKRGPWSPEEDEQLRSYVQRNGIG 237
Score = 38.6 bits (78), Expect(3) = 1e-010
Identities = 18/32 (56%), Positives = 21/32 (65%)
Frame = -3 / -2
Query: 607 LSFFLMHEFHRFLISLSVLPGSCAAI*DHLFP 512
++FFL F FL SLSV PGS A+ DHL P
Sbjct: 485 IAFFLSLVFQ*FLTSLSVRPGSLDAMMDHLLP 390
Score = 37.3 bits (75), Expect(3) = 1e-010
Identities = 18/34 (52%), Positives = 19/34 (55%)
Frame = -3 / -2
Query: 460 PLLRSGLR*FIHLSLQLFPHL*SPASLGTELQQP 359
P L SG R* H S QL PH SPA G +Q P
Sbjct: 338 PCLMSGRR*LSHRSRQLLPHRFSPAFCGRAIQLP 237
Score = 29.5 bits (58), Expect(3) = 1e-010
Identities = 16/37 (43%), Positives = 20/37 (54%)
Frame = -2 / -1
Query: 365 AAMAMLCYVIHEFLILLRGPEPLSQLLLVAARMPPHL 255
AA A+ V + L+LL P P LVAAR PH+
Sbjct: 240 AADAVALDVAPQLLVLLGRPGPPLHARLVAARRAPHV 130
Score = 29.0 bits (57), Expect(2) = 7e-015
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = -1 / -3
Query: 327 SHPPQGTRAPFSASACSSKNASP 259
+ PP+ TRAP S S C S +P
Sbjct: 202 ARPPRATRAPASRSPCRSTARAP 134
>gb|CW180395.1|CW180395 104_594_11160615_148_36632_050 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11160615, DNA
sequence
Length = 673
Score = 101 bits (216), Expect(2) = 3e-039
Identities = 42/65 (64%), Positives = 47/65 (72%)
Frame = +3 / -3
Query: 516 NRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPNTHKPLTEADHGGAAPTISTERT 695
+RWSQIA QLPGRTDNE+KN WNS IKKKLRQ+GIDP THKPL A A + RT
Sbjct: 434 HRWSQIATQLPGRTDNEVKNFWNSYIKKKLRQRGIDPATHKPLPLAADASRAAAAGSSRT 255
Query: 696 SGSSD 710
+ SD
Sbjct: 254 AVFSD 240
Score = 83.1 bits (175), Expect(2) = 3e-039
Identities = 30/38 (78%), Positives = 37/38 (97%)
Frame = +3 / -2
Query: 408 KSCRLRWINYLRPDLKRGAFAQDEEDLIIELHAVLGNR 521
KSCRLRWINYLRPDLKRGAF+Q+EEDLII +H+++GN+
Sbjct: 657 KSCRLRWINYLRPDLKRGAFSQEEEDLIIHVHSMMGNK 544
Score = 75.8 bits (159), Expect(2) = 2e-020
Identities = 33/46 (71%), Positives = 37/46 (80%)
Frame = -3 / +1
Query: 655 SASVSGLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHL 518
+AS SGL V GS+P C SFFLM+EF +FL SLSV PGSC AI*DHL
Sbjct: 295 AASGSGLCVAGSIPRCRSFFLMYEFQKFLTSLSVRPGSCVAI*DHL 432
Score = 68.0 bits (142), Expect(2) = 2e-016
Identities = 31/59 (52%), Positives = 38/59 (64%)
Frame = -2 / +3
Query: 683 ADGGSCTAVISLSKWLVGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPED 507
A GG V + LV ++ LP+LLLD RVP +LDL++ PP QLRCNLRPPV D
Sbjct: 267 ARGGGPAGVGGQRERLVRGRVDPALPELLLDVRVPEVLDLVVRPPRQLRCNLRPPVLAD 443
Score = 46.4 bits (95), Expect(2) = 2e-020
Identities = 19/37 (51%), Positives = 22/37 (59%)
Frame = -2 / +1
Query: 518 VPEDSVQLDDEVFFVLGECPSLEVWPQIVYPPQPTTL 408
V + +DDEV L EC LEV PQ+V PPQP L
Sbjct: 547 VAHHGMDMDDEVLLFLRECSPLEVRPQVVDPPQPAAL 657
Score = 46.4 bits (95), Expect(2) = 3e-005
Identities = 24/41 (58%), Positives = 27/41 (65%)
Frame = +2 / -2
Query: 518 QVVSNCSAAARED***DQESMELVHQEEAEAERH*SQHPQA 640
QVVS+C+AAA D QE +ELVHQEEA A R H QA
Sbjct: 432 QVVSDCNAAAGADGQRGQELLELVHQEEAPAARDRPGHAQA 310
Score = 43.7 bits (89), Expect(2) = 2e-016
Identities = 19/20 (95%), Positives = 19/20 (95%)
Frame = -3 / +2
Query: 466 NAPLLRSGLR*FIHLSLQLF 407
NAPLLRSGLR* IHLSLQLF
Sbjct: 599 NAPLLRSGLR*LIHLSLQLF 658
Score = 40.5 bits (82), Expect = 0.092
Identities = 25/59 (42%), Positives = 27/59 (45%)
Frame = +1 / -1
Query: 535 QRSCQGGLIMRSRIYGTRASRRS*GRKALIPTPTSHLLRLITAVQLPPSAPREPQGPAT 711
QRSC+GG RSR GTR SRRS G TS T PP A + AT
Sbjct: 415 QRSCRGGRTTRSRTSGTRTSRRSSGSAGSTRPRTSRSRWPPTPAGPPPRAAAARRCSAT 239
Score = 27.6 bits (54), Expect(2) = 3e-005
Identities = 13/20 (65%), Positives = 14/20 (70%)
Frame = +1 / -3
Query: 409 RVVG*GG*TI*GQTSREGHS 468
R G*GG T *G+TSR HS
Sbjct: 656 RAAG*GGSTT*GRTSRGEHS 597
>gb|AW564773.1|AW564773 LG1_301_A07.b1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 437
Score = 132 bits (283), Expect(2) = 4e-039
Identities = 46/81 (56%), Positives = 66/81 (81%)
Frame = +3 / +1
Query: 360 GCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAA 539
G W ++PK AGL+RCGKSCRLRW+NYLRPD++ G F +E+ +I+ L+ LG++WS IA+
Sbjct: 193 GNWIAMPKKAGLKRCGKSCRLRWLNYLRPDIRHGGFTAEEDAVILSLYTQLGSKWSLIAS 372
Query: 540 QLPGRTDNEIKNLWNSCIKKK 602
Q+ GRTDN++KN WN+ +KK+
Sbjct: 373 QMEGRTDNDVKNHWNTKLKKR 435
Score = 68.9 bits (144), Expect(2) = 4e-012
Identities = 32/82 (39%), Positives = 46/82 (56%)
Frame = -2 / -3
Query: 599 LLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECPSLEVWPQIVYPPQ 420
LL+ VP +LD+++ PP LR RP PE V+ D+ + GE +V ++V P Q
Sbjct: 432 LLELGVPVVLDVVVRPPLHLRGYQRPLAPELGVEGQDDGVLLGGEAAVADVGAEVVEPAQ 253
Query: 419 PTTLSAPLKPSEFGNRAPAAMA 354
P L+APL+P G+ P A A
Sbjct: 252 PAALAAPLEPGFLGHGDPVAAA 187
Score = 67.0 bits (140), Expect(2) = 2e-011
Identities = 38/80 (47%), Positives = 39/80 (48%)
Frame = -3 / -1
Query: 598 FLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANAPLLRSGLR*FIHLS 419
FL F FL SLSVLP C AI DHL P S P SG R* S
Sbjct: 431 FLSLVFQWFLTSLSVLPSICEAISDHLLPSWV*RDKMTASSSAVKPPWRMSGRR*LSQRS 252
Query: 418 LQLFPHL*SPASLGTELQQP 359
LQL PHL SPA LG +Q P
Sbjct: 251 LQLLPHLLSPAFLGMAIQLP 192
Score = 51.9 bits (107), Expect(2) = 4e-039
Identities = 17/35 (48%), Positives = 25/35 (71%)
Frame = +3 / +1
Query: 258 MGRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHG 362
MGR CC + +++G WSPEEDE L +++ +HG G
Sbjct: 88 MGRTPCCDRAAVKRGPWSPEEDEALRSYVQRHGSG 192
Score = 24.9 bits (48), Expect(2) = 4e-012
Identities = 11/32 (34%), Positives = 13/32 (40%)
Frame = -1 / -2
Query: 321 PPQGTRAPFSASACSSKNASPSQRNAEPGSSN 226
PP T P S C S + P PG S+
Sbjct: 151 PPPATTGPASRPPCRSTASVPWATPGHPGHSS 56
Score = 24.4 bits (47), Expect(2) = 2e-011
Identities = 15/36 (41%), Positives = 18/36 (50%)
Frame = -2 / -3
Query: 365 AAMAMLCYVIHEFLILLRGPEPLSQLLLVAARMPPH 258
AA A+ V + L+LLR P VAAR P H
Sbjct: 195 AAAAVALDVAPQRLVLLRRPRAPLHGRPVAARRPSH 88
>gb|BG159081.1|BG159081 RHIZ2_17_F03.b1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 441
Score = 164 bits (352), Expect = 5e-039
Identities = 61/92 (66%), Positives = 73/92 (79%)
Frame = +3 / +3
Query: 282 KQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRG 461
K RKGLWSPEED+KL ++I HGHGCWS++P AGL R GKSCRLRWINYLRP LK G
Sbjct: 165 KPNYRKGLWSPEEDQKLRDYILLHGHGCWSALPAKAGLHRNGKSCRLRWINYLRPGLKHG 344
Query: 462 AFAQDEEDLIIELHAVLGNRWSQIAAQLPGRT 557
F+ +EE+ ++ LHA LGN+WS+IA LPGRT
Sbjct: 345 TFSPEEEETVMSLHATLGNKWSRIARHLPGRT 440
Score = 77.1 bits (162), Expect = 9e-013
Identities = 36/68 (52%), Positives = 37/68 (54%)
Frame = -3 / -3
Query: 556 VLPGSCAAI*DHLFPRTACXXXXXXXXSWANAPLLRSGLR*FIHLSLQLFPHL*SPASLG 377
VLPG C AI DHL P A S N P R G R* IH SLQL P SPA G
Sbjct: 439 VLPGKCRAILDHLLPSVAWRLITVSSSSGENVPCFRPGRR*LIHRSLQLLPFRCSPALAG 260
Query: 376 TELQQPWP 353
+ LQQPWP
Sbjct: 259 SALQQPWP 236
Score = 73.0 bits (153), Expect = 1e-011
Identities = 34/87 (39%), Positives = 51/87 (58%)
Frame = -2 / -2
Query: 554 PPWQLRCNLRPPVPEDSVQLDDEVFFVLGECPSLEVWPQIVYPPQPTTLSAPLKPSEFGN 375
P Q+ C+ RP V E V+ + + E L+ P++V PPQP L+ P++P G
Sbjct: 437 PARQVPCDPRPLVAERGVEAHHRLLLLRRERAVLQARPEVVDPPQPAALAVPVQPGFGGE 258
Query: 374 RAPAAMAMLCYVIHEFLILLRGPEPLS 294
RAPAA+A+ V+ E L+LLR P+ L+
Sbjct: 257 RAPAAVAVEEDVVAELLVLLRRPQALA 177
>gb|AF470058.1| Sorghum bicolor P-type R2R3 Myb protein (Myb4) gene, partial cds
Length = 1958
Score = 92.7 bits (196), Expect(3) = 1e-038
Identities = 35/45 (77%), Positives = 40/45 (88%)
Frame = +3 / +2
Query: 390 GLQRCGKSCRLRWINYLRPDLKRGAFAQDEEDLIIELHAVLGNRW 524
GL RCGKSCRLRWINYLRPDLKRG F DEE+ II+LHA+LGN++
Sbjct: 1559 GLLRCGKSCRLRWINYLRPDLKRGNFTADEEETIIKLHAMLGNKY 1693
Score = 62.9 bits (131), Expect(3) = 1e-038
Identities = 23/44 (52%), Positives = 30/44 (68%)
Frame = +3 / +1
Query: 261 GRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAG 392
GR CC K L KG W+PEED +L+ +I K+GH W ++PK AG
Sbjct: 1300 GRAPCCAKVGLNKGSWTPEEDMRLIAYIQKYGHANWRALPKQAG 1431
Score = 55.1 bits (114), Expect(3) = 1e-038
Identities = 20/27 (74%), Positives = 25/27 (92%)
Frame = +3 / +2
Query: 519 RWSQIAAQLPGRTDNEIKNLWNSCIKK 599
RWS+IA+ LPGRTDNEIKN+WN+ +KK
Sbjct: 1844 RWSKIASCLPGRTDNEIKNVWNTHLKK 1924
Score = 44.1 bits (90), Expect(3) = 1e-009
Identities = 19/40 (47%), Positives = 25/40 (62%)
Frame = -2 / -2
Query: 518 VPEDSVQLDDEVFFVLGECPSLEVWPQIVYPPQPTTLSAP 399
V E V+LDD + V GE +L+V ++V PPQP L AP
Sbjct: 1687 VAEHGVELDDGLLLVGGEVAALQVRAEVVDPPQPAALPAP 1568
Score = 35.9 bits (72), Expect(3) = 1e-004
Identities = 19/45 (42%), Positives = 20/45 (44%)
Frame = -3 / -3
Query: 523 HLFPRTACXXXXXXXXSWANAPLLRSGLR*FIHLSLQLFPHL*SP 389
+L P A S P RSG R* IH S QLFPH P
Sbjct: 1692 YLLPSMAWSLMMVSSSSAVKLPRFRSGRR*LIHRSRQLFPHRSKP 1558
Score = 34.1 bits (68), Expect(3) = 1e-009
Identities = 16/22 (72%), Positives = 16/22 (72%)
Frame = -3 / -3
Query: 583 FHRFLISLSVLPGSCAAI*DHL 518
F FLISLSVLPG AI DHL
Sbjct: 1908 FQTFLISLSVLPGRHDAILDHL 1843
Score = 33.1 bits (66), Expect(3) = 1e-009
Identities = 19/40 (47%), Positives = 22/40 (55%)
Frame = -2 / -3
Query: 380 GNRAPAAMAMLCYVIHEFLILLRGPEPLSQLLLVAARMPP 261
G AP +A+L V E +LLR P L Q L AAR PP
Sbjct: 1419 GQGAPVGVAVLLDVGDEAHVLLRRPGALVQPHLGAARCPP 1300
Score = 32.2 bits (64), Expect(3) = 1e-004
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = -2 / -2
Query: 596 LDARVP*ILDLIISPPWQLRCNLRPP 519
L RVP +LDL++ P Q R +L PP
Sbjct: 1921 LQVRVPDVLDLVVRPARQARRDLGPP 1844
Score = 25.8 bits (50), Expect(3) = 1e-004
Identities = 14/42 (33%), Positives = 19/42 (45%)
Frame = -1 / -2
Query: 381 WEQSSSSHGHALLCDS*VSHPPQGTRAPFSASACSSKNASPS 256
W +S G C * + PP +R+P SA S +PS
Sbjct: 1420 WAGRASWRGRTSGCRR*GACPPPASRSPCSAPPWRSTVPAPS 1295
>gb|CW136796.1|CW136796 104_521_11118569_116_34846_065 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11118569, DNA
sequence
Length = 693
Score = 111 bits (236), Expect(3) = 1e-038
Identities = 42/61 (68%), Positives = 50/61 (81%)
Frame = +3 / +2
Query: 390 GLQRCGKSCRLRWINYLRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEI 569
GL RCGKSCRLRW NYLRPD+KRG + +EE +I+LH LGNRWSQIA+QLPGR +EI
Sbjct: 437 GLLRCGKSCRLRWTNYLRPDVKRGLLSSEEERTVIDLHEQLGNRWSQIASQLPGRDGHEI 616
Query: 570 K 572
+
Sbjct: 617 R 619
Score = 69.3 bits (145), Expect(3) = 1e-038
Identities = 25/45 (55%), Positives = 32/45 (71%)
Frame = +3 / +3
Query: 258 MGRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAG 392
MGR CC K L+KG W+ EED+KL+ + +GH CW +VPKLAG
Sbjct: 171 MGRQPCCDKVGLKKGPWTAEEDQKLVTFLLANGHCCWRAVPKLAG 305
Score = 65.7 bits (137), Expect(4) = 4e-022
Identities = 32/61 (52%), Positives = 35/61 (57%)
Frame = -3 / -1
Query: 571 LISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANAPLLRSGLR*FIHLSLQLFPHL*S 392
LIS LPGSC AI DH FP +C S + P L SG R* +H SLQLFPH S
Sbjct: 618 LISCPSLPGSCDAIWDHRFPSCSCRSITVLSSSDDSRPRLTSGRR*LVHRSLQLFPHRSS 439
Query: 391 P 389
P
Sbjct: 438 P 436
Score = 59.7 bits (124), Expect(2) = 3e-008
Identities = 26/57 (45%), Positives = 36/57 (63%)
Frame = -2 / -3
Query: 569 DLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECPSLEVWPQIVYPPQPTTLSAP 399
DL+ PP QLR +L PPVP+ VQ+D + + +L+V P++V PPQP L AP
Sbjct: 616 DLVSVPPRQLRRDLGPPVPQLLVQVDHRPLLLRRQQAALDVRPEVVGPPQPAALPAP 446
Score = 41.4 bits (84), Expect(4) = 4e-022
Identities = 18/28 (64%), Positives = 21/28 (75%)
Frame = -2 / -2
Query: 332 EFLILLRGPEPLSQLLLVAARMPPHLNA 249
E L+LLR P PL Q LVAAR+PPH +A
Sbjct: 245 ELLVLLRRPWPLLQPHLVAARLPPHCSA 162
Score = 38.2 bits (77), Expect = 0.45
Identities = 22/46 (47%), Positives = 26/46 (56%)
Frame = +1 / +1
Query: 250 ALRWGGILAATSRS*ERGSGPLRRMRNS*IT*QSMAMAAGALFPNS 387
A +WGG AAT * RG G RR R+S + A AAGA P+S
Sbjct: 163 AEQWGGNRAATRWG*RRGHGRRRRTRSSSPSSSPTATAAGAPCPSS 300
Score = 28.1 bits (55), Expect(4) = 4e-022
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = -3 / -3
Query: 394 SPASLGTELQQPWP 353
+PASLGT QQ WP
Sbjct: 307 APASLGTARQQQWP 266
Score = 26.7 bits (52), Expect(3) = 1e-038
Identities = 9/16 (56%), Positives = 13/16 (81%)
Frame = +3 / +3
Query: 594 KKKLRQKGIDPNTHKP 641
+++LR+ GIDP TH P
Sbjct: 639 QEELRKMGIDPVTHSP 686
Score = 26.7 bits (52), Expect(4) = 4e-022
Identities = 10/13 (76%), Positives = 10/13 (76%)
Frame = -3 / -3
Query: 640 GLWVLGSMPFCLS 602
GLWV GSMP LS
Sbjct: 685 GLWVTGSMPIFLS 647
Score = 24.4 bits (47), Expect(2) = 3e-008
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = -1 / -1
Query: 327 SHPPQGTRAPFSASACSSKNASP 259
S PP + AP S C S ASP
Sbjct: 240 SGPPPPSMAPSSTPPCRSTVASP 172
>gb|CW148312.1|CW148312 104_542_11140354_116_35003_033 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11140354, DNA
sequence
Length = 676
Score = 94.5 bits (200), Expect(2) = 2e-038
Identities = 35/45 (77%), Positives = 40/45 (88%)
Frame = +3 / -2
Query: 387 AGLQRCGKSCRLRWINYLRPDLKRGAFAQDEEDLIIELHAVLGNR 521
AGLQRCGKSCRLRWINYLRPD++RG F +EE LII LHA++GNR
Sbjct: 306 AGLQRCGKSCRLRWINYLRPDIRRGRFTAEEEKLIISLHAIVGNR 172
Score = 91.8 bits (194), Expect(2) = 2e-038
Identities = 31/45 (68%), Positives = 39/45 (86%)
Frame = +3 / -3
Query: 258 MGRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAG 392
MG HSCC +QK+++GLWSPEEDEKL+ +IT HG+GCWS VP+ AG
Sbjct: 596 MGHHSCCNQQKVKRGLWSPEEDEKLIRYITTHGYGCWSEVPEKAG 462
Score = 52.8 bits (109), Expect = 2e-005
Identities = 22/44 (50%), Positives = 28/44 (63%)
Frame = +2 / -2
Query: 260 GEAFLLLQAEAEKGALVP*GG*ETHESHNKAWPWLLELCSQTRW 391
G + LL AE E+GALVP*G *+ H+ H+ W WLLE + W
Sbjct: 594 GASLLLQPAEGEEGALVP*GR*KAHQIHHHPWLWLLERGPRESW 463
Score = 52.8 bits (109), Expect = 2e-005
Identities = 27/46 (58%), Positives = 30/46 (65%)
Frame = +1 / -1
Query: 253 LRWGGILAATSRS*ERGSGPLRRMRNS*IT*QSMAMAAGALFPNSL 390
L WG AATSR * GSGPLR+M++S T MAMAAGA P L
Sbjct: 601 LAWGITPAATSRR*RGGSGPLRKMKSSSDTSPPMAMAAGARSPRKL 464
Score = 48.7 bits (100), Expect(2) = 3e-010
Identities = 25/44 (56%), Positives = 28/44 (63%)
Frame = -2 / +3
Query: 389 SEFGNRAPAAMAMLCYVIHEFLILLRGPEPLSQLLLVAARMPPH 258
S G+ APAA+AM V E I LRGPEP LLLVAA + PH
Sbjct: 465 SFLGDLAPAAIAMGGDVSDELFIFLRGPEPPLHLLLVAAGVMPH 596
Score = 42.3 bits (86), Expect(2) = 3e-010
Identities = 17/42 (40%), Positives = 25/42 (59%)
Frame = -2 / +1
Query: 521 PVPEDSVQLDDEVFFVLGECPSLEVWPQIVYPPQPTTLSAPL 396
PV + V+ DD++ + E PS +V ++V PPQP L PL
Sbjct: 172 PVANNGVEADDQLLLLRREPPSPDVRSEVVDPPQPAALPTPL 297
Score = 41.8 bits (85), Expect(2) = 5e-008
Identities = 20/37 (54%), Positives = 23/37 (62%)
Frame = -1 / +2
Query: 369 SSSHGHALLCDS*VSHPPQGTRAPFSASACSSKNASP 259
SSSH H C * H PQGTRAP S SA S++ +P
Sbjct: 485 SSSHSHGW*CI**AFHLPQGTRAPSSPSAGCSRSDAP 595
Score = 41.4 bits (84), Expect(2) = 5e-008
Identities = 22/46 (47%), Positives = 23/46 (50%)
Frame = -3 / +2
Query: 523 HLFPRTACXXXXXXXXSWANAPLLRSGLR*FIHLSLQLFPHL*SPA 386
+L P A S N P L SGLR* IH S QLFPH PA
Sbjct: 170 YLLPTMAWRLMISFSSSAVNRPRLMSGLR*LIHRSRQLFPHRCRPA 307
>gb|CW140879.1|CW140879 104_531_11136014_116_34925_053 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11136014, DNA
sequence
Length = 721
Score = 94.5 bits (200), Expect(2) = 2e-038
Identities = 35/45 (77%), Positives = 40/45 (88%)
Frame = +3 / -1
Query: 387 AGLQRCGKSCRLRWINYLRPDLKRGAFAQDEEDLIIELHAVLGNR 521
AGLQRCGKSCRLRWINYLRPD++RG F +EE LII LHA++GNR
Sbjct: 163 AGLQRCGKSCRLRWINYLRPDIRRGRFTAEEEKLIISLHAIVGNR 29
Score = 91.8 bits (194), Expect(2) = 2e-038
Identities = 31/45 (68%), Positives = 39/45 (86%)
Frame = +3 / -2
Query: 258 MGRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAG 392
MG HSCC +QK+++GLWSPEEDEKL+ +IT HG+GCWS VP+ AG
Sbjct: 453 MGHHSCCNQQKVKRGLWSPEEDEKLIRYITTHGYGCWSEVPEKAG 319
Score = 52.8 bits (109), Expect = 2e-005
Identities = 22/44 (50%), Positives = 28/44 (63%)
Frame = +2 / -1
Query: 260 GEAFLLLQAEAEKGALVP*GG*ETHESHNKAWPWLLELCSQTRW 391
G + LL AE E+GALVP*G *+ H+ H+ W WLLE + W
Sbjct: 451 GASLLLQPAEGEEGALVP*GR*KAHQIHHHPWLWLLERGPRESW 320
Score = 52.8 bits (109), Expect = 2e-005
Identities = 27/46 (58%), Positives = 30/46 (65%)
Frame = +1 / -3
Query: 253 LRWGGILAATSRS*ERGSGPLRRMRNS*IT*QSMAMAAGALFPNSL 390
L WG AATSR * GSGPLR+M++S T MAMAAGA P L
Sbjct: 458 LAWGITPAATSRR*RGGSGPLRKMKSSSDTSPPMAMAAGARSPRKL 321
Score = 48.7 bits (100), Expect(2) = 3e-010
Identities = 25/44 (56%), Positives = 28/44 (63%)
Frame = -2 / +1
Query: 389 SEFGNRAPAAMAMLCYVIHEFLILLRGPEPLSQLLLVAARMPPH 258
S G+ APAA+AM V E I LRGPEP LLLVAA + PH
Sbjct: 322 SFLGDLAPAAIAMGGDVSDELFIFLRGPEPPLHLLLVAAGVMPH 453
Score = 42.3 bits (86), Expect(2) = 3e-010
Identities = 17/42 (40%), Positives = 25/42 (59%)
Frame = -2 / +2
Query: 521 PVPEDSVQLDDEVFFVLGECPSLEVWPQIVYPPQPTTLSAPL 396
PV + V+ DD++ + E PS +V ++V PPQP L PL
Sbjct: 29 PVANNGVEADDQLLLLRREPPSPDVRSEVVDPPQPAALPTPL 154
Score = 41.8 bits (85), Expect(2) = 6e-008
Identities = 20/37 (54%), Positives = 23/37 (62%)
Frame = -1 / +3
Query: 369 SSSHGHALLCDS*VSHPPQGTRAPFSASACSSKNASP 259
SSSH H C * H PQGTRAP S SA S++ +P
Sbjct: 342 SSSHSHGW*CI**AFHLPQGTRAPSSPSAGCSRSDAP 452
Score = 41.4 bits (84), Expect(2) = 6e-008
Identities = 22/46 (47%), Positives = 23/46 (50%)
Frame = -3 / +3
Query: 523 HLFPRTACXXXXXXXXSWANAPLLRSGLR*FIHLSLQLFPHL*SPA 386
+L P A S N P L SGLR* IH S QLFPH PA
Sbjct: 27 YLLPTMAWRLMISFSSSAVNRPRLMSGLR*LIHRSRQLFPHRCRPA 164
>gb|CW136797.1|CW136797 104_521_11118569_148_34842_065 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11118569, DNA
sequence
Length = 576
Score = 162 bits (348), Expect = 2e-038
Identities = 63/85 (74%), Positives = 72/85 (84%)
Frame = +3 / -3
Query: 390 GLQRCGKSCRLRWINYLRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEI 569
GL RCGKSCRLRW NYLRPD+KRG + +EE +I+LH LGNRWS+IA+QLPGRTDNEI
Sbjct: 451 GLLRCGKSCRLRWTNYLRPDVKRGLLSSEEERTVIDLHEQLGNRWSKIASQLPGRTDNEI 272
Query: 570 KNLWNSCIKKKLRQKGIDPNTHKPL 644
KN WN+ IKKKLR+ GIDP THKPL
Sbjct: 271 KNHWNTHIKKKLRKMGIDPVTHKPL 197
Score = 108 bits (230), Expect = 4e-022
Identities = 51/84 (60%), Positives = 54/84 (64%)
Frame = -3 / +3
Query: 640 GLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANA 461
GLWV GSMP LSFFLM F FLISLSVLPGSC AI DH FP +C S +
Sbjct: 201 GLWVTGSMPIFLSFFLMCVFQWFLISLSVLPGSCDAILDHRFPSCSCRSITVLSSSDDSR 380
Query: 460 PLLRSGLR*FIHLSLQLFPHL*SP 389
P L SG R* +H SLQLFPH SP
Sbjct: 381 PRLTSGRR*LVHRSLQLFPHRSSP 452
Score = 97.3 bits (206), Expect = 7e-019
Identities = 42/84 (50%), Positives = 58/84 (69%)
Frame = -2 / +2
Query: 650 LSKWLVGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVL 471
L + LVG G++A LP+LLLD RVP +LDL++ PP QLR +L PPVP+ VQ+D +
Sbjct: 191 LMEGLVGDGVDAHLPELLLDVRVPVVLDLVVRPPRQLRRDLGPPVPQLLVQVDHRPLLLR 370
Query: 470 GECPSLEVWPQIVYPPQPTTLSAP 399
+ +L+V P++V PPQP L AP
Sbjct: 371 RQQAALDVRPEVVGPPQPAALPAP 442
Score = 49.6 bits (102), Expect = 2e-004
Identities = 22/35 (62%), Positives = 25/35 (71%)
Frame = +1 / -1
Query: 535 QRSCQGGLIMRSRIYGTRASRRS*GRKALIPTPTS 639
+RSC+GG RSR GTR SRRS GR A P+PTS
Sbjct: 306 RRSCRGGRTTRSRTTGTRTSRRSSGRWASTPSPTS 202
Score = 45.1 bits (92), Expect = 0.004
Identities = 22/42 (52%), Positives = 27/42 (64%)
Frame = +2 / -2
Query: 515 EQVVSNCSAAARED***DQESMELVHQEEAEAERH*SQHPQA 640
E VV + AAA ED DQE +E HQEEA+ + H +HPQA
Sbjct: 326 EPVVQDRVAAAGEDGQRDQEPLEHAHQEEAQEDGHRPRHPQA 201
>gb|CW396674.1|CW396674 fsbb001f085d16f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f085d16, DNA
sequence
Length = 652
Score = 162 bits (348), Expect = 2e-038
Identities = 63/85 (74%), Positives = 72/85 (84%)
Frame = +3 / +3
Query: 390 GLQRCGKSCRLRWINYLRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEI 569
GL RCGKSCRLRW NYLRPD+KRG + +EE +I+LH LGNRWS+IA+QLPGRTDNEI
Sbjct: 102 GLLRCGKSCRLRWTNYLRPDVKRGLLSSEEERTVIDLHEQLGNRWSKIASQLPGRTDNEI 281
Query: 570 KNLWNSCIKKKLRQKGIDPNTHKPL 644
KN WN+ IKKKLR+ GIDP THKPL
Sbjct: 282 KNHWNTHIKKKLRKMGIDPVTHKPL 356
Score = 108 bits (230), Expect = 4e-022
Identities = 51/84 (60%), Positives = 54/84 (64%)
Frame = -3 / -1
Query: 640 GLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANA 461
GLWV GSMP LSFFLM F FLISLSVLPGSC AI DH FP +C S +
Sbjct: 352 GLWVTGSMPIFLSFFLMCVFQWFLISLSVLPGSCDAILDHRFPSCSCRSITVLSSSDDSR 173
Query: 460 PLLRSGLR*FIHLSLQLFPHL*SP 389
P L SG R* +H SLQLFPH SP
Sbjct: 172 PRLTSGRR*LVHRSLQLFPHRSSP 101
Score = 97.3 bits (206), Expect = 7e-019
Identities = 42/84 (50%), Positives = 58/84 (69%)
Frame = -2 / -3
Query: 650 LSKWLVGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVL 471
L + LVG G++A LP+LLLD RVP +LDL++ PP QLR +L PPVP+ VQ+D +
Sbjct: 362 LMEGLVGDGVDAHLPELLLDVRVPVVLDLVVRPPRQLRRDLGPPVPQLLVQVDHRPLLLR 183
Query: 470 GECPSLEVWPQIVYPPQPTTLSAP 399
+ +L+V P++V PPQP L AP
Sbjct: 182 RQQAALDVRPEVVGPPQPAALPAP 111
Score = 49.6 bits (102), Expect = 2e-004
Identities = 22/35 (62%), Positives = 25/35 (71%)
Frame = +1 / +1
Query: 535 QRSCQGGLIMRSRIYGTRASRRS*GRKALIPTPTS 639
+RSC+GG RSR GTR SRRS GR A P+PTS
Sbjct: 247 RRSCRGGRTTRSRTTGTRTSRRSSGRWASTPSPTS 351
Score = 45.1 bits (92), Expect = 0.004
Identities = 22/42 (52%), Positives = 27/42 (64%)
Frame = +2 / +2
Query: 515 EQVVSNCSAAARED***DQESMELVHQEEAEAERH*SQHPQA 640
E VV + AAA ED DQE +E HQEEA+ + H +HPQA
Sbjct: 227 EPVVQDRVAAAGEDGQRDQEPLEHAHQEEAQEDGHRPRHPQA 352
>gb|CW378977.1|CW378977 fsbb001f057p23k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f057p23, DNA
sequence
Length = 677
Score = 99.1 bits (210), Expect(2) = 2e-038
Identities = 37/44 (84%), Positives = 41/44 (93%)
Frame = +3 / -2
Query: 390 GLQRCGKSCRLRWINYLRPDLKRGAFAQDEEDLIIELHAVLGNR 521
GL+RCGKSCRLRWINYLRPDLKRG+F+Q EEDLII LH +LGNR
Sbjct: 232 GLERCGKSCRLRWINYLRPDLKRGSFSQQEEDLIISLHKILGNR 101
Score = 86.8 bits (183), Expect(2) = 2e-038
Identities = 32/46 (69%), Positives = 38/46 (82%)
Frame = +3 / -3
Query: 258 MGRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGL 395
MGR + + KLR+GLWSPEEDEKL NHI ++G GCWSSVPKLAG+
Sbjct: 537 MGREAAATRPKLRRGLWSPEEDEKLYNHIIRYGVGCWSSVPKLAGM 400
Score = 51.5 bits (106), Expect(2) = 5e-008
Identities = 23/46 (50%), Positives = 25/46 (54%)
Frame = -3 / +3
Query: 526 DHLFPRTACXXXXXXXXSWANAPLLRSGLR*FIHLSLQLFPHL*SP 389
++L P W PLLRSGLR* IHLSLQL PHL P
Sbjct: 96 NYLLPSILWRLMMRSSSCWEKLPLLRSGLR*LIHLSLQLLPHLSKP 233
Score = 47.3 bits (97), Expect(2) = 4e-006
Identities = 21/43 (48%), Positives = 27/43 (62%)
Frame = -2 / +2
Query: 521 PVPEDSVQLDDEVFFVLGECPSLEVWPQIVYPPQPTTLSAPLK 393
PV V+ DDE+ +LGE LEV PQ+V P QP L+A L+
Sbjct: 101 PVA*YLVEADDEILLLLGEAAPLEVRPQVVDPSQPAALAASLQ 229
Score = 35.9 bits (72), Expect = 2.2
Identities = 16/36 (44%), Positives = 23/36 (63%)
Frame = +2 / -2
Query: 281 QAEAEKGALVP*GG*ETHESHNKAWPWLLELCSQTR 388
+A+A +G+LV GG E +SH+ W LLEL + R
Sbjct: 514 EAQAAEGSLVAGGGREALQSHHPIWRRLLELSPKAR 407
Score = 31.8 bits (63), Expect(2) = 5e-008
Identities = 18/38 (47%), Positives = 22/38 (57%)
Frame = -2 / +1
Query: 371 APAAMAMLCYVIHEFLILLRGPEPLSQLLLVAARMPPH 258
APAA A+ VI E L+LLR P+ QL R+ PH
Sbjct: 424 APAADAISDDVIVELLVLLRRPKTPPQLGPRCRRLAPH 537
Score = 29.5 bits (58), Expect(2) = 4e-006
Identities = 12/17 (70%), Positives = 13/17 (76%)
Frame = -3 / +2
Query: 391 PASLGTELQQPWPCFVM 341
PAS GTELQQP P +M
Sbjct: 404 PASFGTELQQPTPYRMM 454
>gb|CW364381.1|CW364381 fsbb001f036g09k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f036g09, DNA
sequence
Length = 727
Score = 99.1 bits (210), Expect(2) = 2e-038
Identities = 37/44 (84%), Positives = 41/44 (93%)
Frame = +3 / -1
Query: 390 GLQRCGKSCRLRWINYLRPDLKRGAFAQDEEDLIIELHAVLGNR 521
GL+RCGKSCRLRWINYLRPDLKRG+F+Q EEDLII LH +LGNR
Sbjct: 142 GLERCGKSCRLRWINYLRPDLKRGSFSQQEEDLIISLHKILGNR 11
Score = 86.8 bits (183), Expect(2) = 2e-038
Identities = 32/46 (69%), Positives = 38/46 (82%)
Frame = +3 / -2
Query: 258 MGRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGL 395
MGR + + KLR+GLWSPEEDEKL NHI ++G GCWSSVPKLAG+
Sbjct: 447 MGREAAATRPKLRRGLWSPEEDEKLYNHIIRYGVGCWSSVPKLAGM 310
Score = 53.8 bits (111), Expect(2) = 1e-008
Identities = 24/45 (53%), Positives = 24/45 (53%)
Frame = -3 / +3
Query: 523 HLFPRTACXXXXXXXXSWANAPLLRSGLR*FIHLSLQLFPHL*SP 389
HL P W PLLRSGLR* IHLSLQL PHL P
Sbjct: 9 HLLPSILWRLMMRSSSCWEKLPLLRSGLR*LIHLSLQLLPHLSKP 143
Score = 47.3 bits (97), Expect(2) = 4e-006
Identities = 21/43 (48%), Positives = 27/43 (62%)
Frame = -2 / +2
Query: 521 PVPEDSVQLDDEVFFVLGECPSLEVWPQIVYPPQPTTLSAPLK 393
PV V+ DDE+ +LGE LEV PQ+V P QP L+A L+
Sbjct: 11 PVA*YLVEADDEILLLLGEAAPLEVRPQVVDPSQPAALAASLQ 139
Score = 35.9 bits (72), Expect = 2.2
Identities = 16/36 (44%), Positives = 23/36 (63%)
Frame = +2 / -1
Query: 281 QAEAEKGALVP*GG*ETHESHNKAWPWLLELCSQTR 388
+A+A +G+LV GG E +SH+ W LLEL + R
Sbjct: 424 EAQAAEGSLVAGGGREALQSHHPIWRRLLELSPKAR 317
Score = 31.8 bits (63), Expect(2) = 1e-008
Identities = 18/38 (47%), Positives = 22/38 (57%)
Frame = -2 / +1
Query: 371 APAAMAMLCYVIHEFLILLRGPEPLSQLLLVAARMPPH 258
APAA A+ VI E L+LLR P+ QL R+ PH
Sbjct: 334 APAADAISDDVIVELLVLLRRPKTPPQLGPRCRRLAPH 447
Score = 29.5 bits (58), Expect(2) = 4e-006
Identities = 12/17 (70%), Positives = 13/17 (76%)
Frame = -3 / +2
Query: 391 PASLGTELQQPWPCFVM 341
PAS GTELQQP P +M
Sbjct: 314 PASFGTELQQPTPYRMM 364
>gb|CW323228.1|CW323228 104_817_11476519_148_35956_026 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11476519, DNA
sequence
Length = 743
Score = 161 bits (347), Expect = 3e-038
Identities = 62/114 (54%), Positives = 84/114 (73%)
Frame = +3 / +1
Query: 291 LRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRGAFA 470
LR+G W+ +ED L+N+I HG G W+S+ + AGL+R GKSCRLRW+NYLRPD++RG
Sbjct: 154 LRRGPWTADEDILLVNYIAVHGEGRWNSLARSAGLKRTGKSCRLRWLNYLRPDVRRGNIT 333
Query: 471 QDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPNT 632
+E+ LI++LH+ GNRWS+IA LPGRTDNEIKN W + ++K R D N+
Sbjct: 334 AEEQLLILDLHSRWGNRWSKIAQHLPGRTDNEIKNYWRTRVQKHARHLRCDVNS 495
Score = 76.2 bits (160), Expect = 2e-012
Identities = 38/108 (35%), Positives = 60/108 (55%)
Frame = -2 / -3
Query: 629 VGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECPSLE 450
V + A +P +LL A P +LDL++ Q+ +L PPV VQ+ D+ + G+
Sbjct: 492 VDVAAEVPGVLLHAGPPVVLDLVVGAAGQVLRDLGPPVAPARVQVQDQQLLLGGDVAPPH 313
Query: 449 VWPQIVYPPQPTTLSAPLKPSEFGNRAPAAMAMLCYVIHEFLILLRGP 306
V P++V PP+P L+ L+ G R PAA+A+ V+ E +L+R P
Sbjct: 312 VGPEVVEPPEPAALARALQAGGAGERVPAALAVDGDVVDEEDVLVRRP 169
Score = 67.0 bits (140), Expect = 9e-010
Identities = 40/99 (40%), Positives = 45/99 (45%)
Frame = -3 / -1
Query: 637 LWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANAP 458
L +L S CL+ F FLISLSV PG C AI DH P+ C S P
Sbjct: 500 LALLTSQRRCLACFCTRVRQ*FLISLSVRPGRCCAILDHRLPQRECRSRISSCSSAVMLP 321
Query: 457 LLRSGLR*FIHLSLQLFPHL*SPASLGTELQQPWPCFVM 341
SG R* H S QL P PA +E Q+P P M
Sbjct: 320 RRTSGRR*LSHRSRQLLPVRFRPAERASEFQRPSPWTAM 204
>gb|CW331265.1|CW331265 104_828_11480814_148_36025_023 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11480814, DNA
sequence
Length = 585
Score = 161 bits (347), Expect = 3e-038
Identities = 62/114 (54%), Positives = 84/114 (73%)
Frame = +3 / -1
Query: 291 LRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRGAFA 470
LR+G W+ +ED L+N+I HG G W+S+ + AGL+R GKSCRLRW+NYLRPD++RG
Sbjct: 534 LRRGPWTADEDILLVNYIAVHGEGRWNSLARSAGLKRTGKSCRLRWLNYLRPDVRRGNIT 355
Query: 471 QDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPNT 632
+E+ LI++LH+ GNRWS+IA LPGRTDNEIKN W + ++K R D N+
Sbjct: 354 AEEQLLILDLHSRWGNRWSKIAQHLPGRTDNEIKNYWRTRVQKHARHLRCDVNS 193
Score = 74.8 bits (157), Expect = 4e-012
Identities = 37/108 (34%), Positives = 60/108 (55%)
Frame = -2 / +1
Query: 629 VGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECPSLE 450
V + A +P +LL A P +LDL++ Q+ +L PPV VQ+ D+ + G+
Sbjct: 196 VDVAAEVPGVLLHAGPPVVLDLVVGAAGQVLRDLGPPVAPARVQVQDQQLLLGGDVAPPH 375
Query: 449 VWPQIVYPPQPTTLSAPLKPSEFGNRAPAAMAMLCYVIHEFLILLRGP 306
V P++V PP+P L+ L+ G R PAA+A+ V+ + +L+R P
Sbjct: 376 VGPEVVEPPEPAALARALQAGGAGERVPAALAVDGDVVDQEDVLVRRP 519
Score = 67.0 bits (140), Expect = 9e-010
Identities = 40/99 (40%), Positives = 45/99 (45%)
Frame = -3 / +2
Query: 637 LWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANAP 458
L +L S CL+ F FLISLSV PG C AI DH P+ C S P
Sbjct: 188 LALLTSQRRCLACFCTRVRQ*FLISLSVRPGRCCAILDHRLPQRECRSRISSCSSAVMLP 367
Query: 457 LLRSGLR*FIHLSLQLFPHL*SPASLGTELQQPWPCFVM 341
SG R* H S QL P PA +E Q+P P M
Sbjct: 368 RRTSGRR*LSHRSRQLLPVRFRPAERASEFQRPSPWTAM 484
>gb|CW414654.1|CW414654 fsbb001f114g17k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f114g17, DNA
sequence
Length = 626
Score = 158 bits (340), Expect(2) = 3e-038
Identities = 58/89 (65%), Positives = 70/89 (78%)
Frame = +3 / +2
Query: 258 MGRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINY 437
MGR CC K KG W+ EED++L+ +I HG GCW S+PK AGL RCGKSCRLRWINY
Sbjct: 161 MGRSPCCEKAHTNKGAWTKEEDDRLVAYIRAHGEGCWRSLPKAAGLMRCGKSCRLRWINY 340
Query: 438 LRPDLKRGAFAQDEEDLIIELHAVLGNRW 524
LRPDLKRG F DE+DLII+LH++LGN++
Sbjct: 341 LRPDLKRGNFTADEDDLIIKLHSLLGNKY 427
Score = 82.6 bits (174), Expect = 2e-014
Identities = 38/87 (43%), Positives = 53/87 (60%)
Frame = -2 / -2
Query: 518 VPEDSVQLDDEVFFVLGECPSLEVWPQIVYPPQPTTLSAPLKPSEFGNRAPAAMAMLCYV 339
V E++VQLDDEV V GE +LEV ++V P + L+A + G R PA A+ V
Sbjct: 421 VAEEAVQLDDEVVLVGGEVAALEVGAEVVDPAEAAALAAAHQSGRLGQRPPAPFAVRADV 242
Query: 338 IHEFLILLRGPEPLSQLLLVAARMPPH 258
H+ ++LL GP L ++ L+AAR PPH
Sbjct: 241 RHQAVVLLLGPRALVRVRLLAARRPPH 161
Score = 51.5 bits (106), Expect = 5e-005
Identities = 25/58 (43%), Positives = 29/58 (50%)
Frame = -3 / -3
Query: 523 HLFPRTACXXXXXXXXSWANAPLLRSGLR*FIHLSLQLFPHL*SPASLGTELQQPWPC 350
+L PR C S P LRSG R* I QL P SPA+LG++ Q P PC
Sbjct: 426 YLLPRRLCSLMMRSSSSAVKLPRLRSGRR*LIQRRRQLLPQRISPAALGSDRQHPSPC 253
Score = 23.1 bits (44), Expect(2) = 3e-038
Identities = 9/26 (34%), Positives = 14/26 (53%)
Frame = +1 / +1
Query: 625 PTPTSHLLRLITAVQLPPSAPREPQG 702
P+ T+ +RLI + LP P+G
Sbjct: 511 PSQTNLSIRLIDCLHLPAGGRSSPRG 588
>gb|CW131835.1|CW131835 104_514_11115886_116_34787_081 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11115886, DNA
sequence
Length = 603
Score = 95.0 bits (201), Expect(2) = 4e-038
Identities = 36/43 (83%), Positives = 39/43 (90%)
Frame = +3 / +2
Query: 516 NRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPNTHKPL 644
+RWSQIA QLPGRTDNE+KN WNS IKKKLRQ+GIDP THKPL
Sbjct: 443 HRWSQIATQLPGRTDNEVKNFWNSYIKKKLRQRGIDPATHKPL 571
Score = 86.3 bits (182), Expect(2) = 4e-038
Identities = 33/47 (70%), Positives = 40/47 (85%)
Frame = +3 / +1
Query: 384 LAGLQRCGKSCRLRWINYLRPDLKRGAFAQDEEDLIIELHAVLGNRW 524
L L RCGKSC L WINYLRPDLKRGAF+ +EEDLII LH+++GN++
Sbjct: 196 LLRL*RCGKSCWLTWINYLRPDLKRGAFSHEEEDLIIHLHSMMGNKY 336
Score = 75.8 bits (159), Expect(2) = 1e-022
Identities = 33/46 (71%), Positives = 37/46 (80%)
Frame = -3 / -1
Query: 655 SASVSGLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHL 518
+AS SGL V GS+P C SFFLM+EF +FL SLSV PGSC AI*DHL
Sbjct: 582 AASGSGLCVAGSIPRCRSFFLMYEFQKFLTSLSVRPGSCVAI*DHL 445
Score = 65.2 bits (136), Expect(2) = 6e-017
Identities = 27/44 (61%), Positives = 33/44 (75%)
Frame = -2 / -3
Query: 638 LVGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPED 507
LV ++ LP+LLLD RVP +LDL++ PP QLRCNLRPPV D
Sbjct: 565 LVRGRVDPALPELLLDVRVPEVLDLVVRPPRQLRCNLRPPVLAD 434
Score = 53.3 bits (110), Expect(2) = 1e-022
Identities = 20/41 (48%), Positives = 25/41 (60%)
Frame = -2 / -1
Query: 518 VPEDSVQLDDEVFFVLGECPSLEVWPQIVYPPQPTTLSAPL 396
V +++DDEV + EC LEVWPQ+V P QP L PL
Sbjct: 330 VAHHGMEMDDEVLLFMRECSPLEVWPQVVDPRQPAALPTPL 208
Score = 48.3 bits (99), Expect(2) = 6e-017
Identities = 20/23 (86%), Positives = 21/23 (91%)
Frame = -3 / -2
Query: 466 NAPLLRSGLR*FIHLSLQLFPHL 398
NAPLLRSGLR* IH+S QLFPHL
Sbjct: 278 NAPLLRSGLR*LIHVSQQLFPHL 210
Score = 46.4 bits (95), Expect(2) = 5e-006
Identities = 24/41 (58%), Positives = 27/41 (65%)
Frame = +2 / +1
Query: 518 QVVSNCSAAARED***DQESMELVHQEEAEAERH*SQHPQA 640
QVVS+C+AAA D QE +ELVHQEEA A R H QA
Sbjct: 445 QVVSDCNAAAGADGQRGQELLELVHQEEAPAARDRPGHAQA 567
Score = 39.1 bits (79), Expect = 0.24
Identities = 17/25 (68%), Positives = 18/25 (72%)
Frame = +1 / +3
Query: 535 QRSCQGGLIMRSRIYGTRASRRS*G 609
QRSC+GG RSR GTR SRRS G
Sbjct: 462 QRSCRGGRTTRSRTSGTRTSRRSSG 536
Score = 29.9 bits (59), Expect(2) = 5e-006
Identities = 14/25 (56%), Positives = 16/25 (64%)
Frame = +1 / +2
Query: 394 FKGAERVVG*GG*TI*GQTSREGHS 468
++G R G* G T *GQTSR HS
Sbjct: 206 YRGVGRAAG*RGSTT*GQTSRGEHS 280
>gb|CW257715.1|CW257715 104_723_11227485_116_35160_091 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11227485, DNA
sequence
Length = 666
Score = 99.1 bits (210), Expect(2) = 5e-038
Identities = 37/44 (84%), Positives = 41/44 (93%)
Frame = +3 / -3
Query: 390 GLQRCGKSCRLRWINYLRPDLKRGAFAQDEEDLIIELHAVLGNR 521
GL+RCGKSCRLRWINYLRPDLKRG+F+Q EEDLII LH +LGNR
Sbjct: 343 GLERCGKSCRLRWINYLRPDLKRGSFSQQEEDLIISLHKILGNR 212
Score = 85.4 bits (180), Expect(2) = 5e-038
Identities = 32/46 (69%), Positives = 38/46 (82%)
Frame = +3 / -1
Query: 258 MGRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGL 395
MGR + + KLR+GLWSPEEDEKL NHI ++G GCWSSVPKLAG+
Sbjct: 648 MGREARATRPKLRRGLWSPEEDEKLYNHIIRYGVGCWSSVPKLAGM 511
Score = 51.5 bits (106), Expect(2) = 5e-008
Identities = 23/46 (50%), Positives = 25/46 (54%)
Frame = -3 / +3
Query: 526 DHLFPRTACXXXXXXXXSWANAPLLRSGLR*FIHLSLQLFPHL*SP 389
++L P W PLLRSGLR* IHLSLQL PHL P
Sbjct: 207 NYLLPSILWRLMMRSSSCWEKLPLLRSGLR*LIHLSLQLLPHLSKP 344
Score = 47.3 bits (97), Expect(2) = 4e-006
Identities = 21/43 (48%), Positives = 27/43 (62%)
Frame = -2 / +2
Query: 521 PVPEDSVQLDDEVFFVLGECPSLEVWPQIVYPPQPTTLSAPLK 393
PV V+ DDE+ +LGE LEV PQ+V P QP L+A L+
Sbjct: 212 PVA*YLVEADDEILLLLGEAAPLEVRPQVVDPSQPAALAASLQ 340
Score = 35.9 bits (72), Expect = 2.2
Identities = 16/36 (44%), Positives = 23/36 (63%)
Frame = +2 / -3
Query: 281 QAEAEKGALVP*GG*ETHESHNKAWPWLLELCSQTR 388
+A+A +G+LV GG E +SH+ W LLEL + R
Sbjct: 625 EAQAAEGSLVAGGGREALQSHHPIWRRLLELSPKAR 518
Score = 31.8 bits (63), Expect(2) = 5e-008
Identities = 18/38 (47%), Positives = 22/38 (57%)
Frame = -2 / +1
Query: 371 APAAMAMLCYVIHEFLILLRGPEPLSQLLLVAARMPPH 258
APAA A+ VI E L+LLR P+ QL R+ PH
Sbjct: 535 APAADAISDDVIVELLVLLRRPKTPPQLGPRCPRLAPH 648
Score = 29.5 bits (58), Expect(2) = 4e-006
Identities = 12/17 (70%), Positives = 13/17 (76%)
Frame = -3 / +2
Query: 391 PASLGTELQQPWPCFVM 341
PAS GTELQQP P +M
Sbjct: 515 PASFGTELQQPTPYRMM 565
>gb|CW036403.1|CW036403 104_267_10503738_115_30375 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10503738, DNA
sequence
Length = 681
Score = 105 bits (225), Expect(3) = 1e-037
Identities = 46/83 (55%), Positives = 54/83 (65%)
Frame = +3 / -2
Query: 1335 SFAETTTVMQNQSQTLYDDVIKAESQFNIEGICASWFXXXXXXXXXXVAPDMYDKDLQRM 1514
+F +T MQN SQ+LY+DVIKAESQFNIEG+CA+W V D+YDKDLQRM
Sbjct: 506 TFTDTPATMQNLSQSLYEDVIKAESQFNIEGLCAAWSQNLQPQQHLQVVSDLYDKDLQRM 327
Query: 1515 QLSFENI*ALCSTTWNRADQKKQ 1583
LSFENI*A C QK +
Sbjct: 326 SLSFENI*ATCCMQGTEK*QKAE 258
Score = 84.5 bits (178), Expect(2) = 1e-025
Identities = 42/70 (60%), Positives = 46/70 (65%)
Frame = -3 / +1
Query: 1552 VEHNA*IFSKDSCILCKSLSYMSGATXXXXXXX*FWNQEAHIPSMLNWLSALITSS*SVW 1373
++H A*IFSKD ILCKSLSY S T F +Q A PSMLNWLSALITSS S W
Sbjct: 289 MQHVA*IFSKDKDILCKSLSYKSDTTCRCCCGCRF*DQAAQRPSMLNWLSALITSSYSDW 468
Query: 1372 LWFCMTVVVS 1343
L FC+ VS
Sbjct: 469 LRFCIVAGVS 498
Score = 81.3 bits (171), Expect(2) = 7e-023
Identities = 37/65 (56%), Positives = 43/65 (66%)
Frame = +1 / -3
Query: 1354 QSCRTRAKRFMMM*SRQRANST*KGYVLLGSRISSHSNSCR*HQTCMTRTCKECNYLLRI 1533
Q CR A M S+ RANST*+ V G +I SHSN CR*+Q CMTR C+EC LLRI
Sbjct: 487 QRCRILASHCTKMLSKPRANST*RASVQPGLKICSHSNICR*YQICMTRICRECPCLLRI 308
Query: 1534 SRHYV 1548
SR +V
Sbjct: 307 SRQHV 293
Score = 71.6 bits (150), Expect(2) = 4e-018
Identities = 33/64 (51%), Positives = 38/64 (59%)
Frame = +2 / -1
Query: 1361 AEPEPNAL**CDQGREPIQHRRDMCFLVPESXXXXXXXGSTRHV*QGLAKNATIF*EYLG 1540
AE P + C Q REPIQHR +C LV +S GS R V*QG A+N +F*EYLG
Sbjct: 480 AES*PVTVRRCYQSREPIQHRGPLCSLVSKSAATATSAGSIRFV*QGFAENVLVF*EYLG 301
Query: 1541 IMFH 1552
M H
Sbjct: 300 NMLH 289
Score = 68.0 bits (142), Expect(3) = 1e-037
Identities = 27/61 (44%), Positives = 35/61 (57%)
Frame = +3 / -2
Query: 1173 PXXXXXXXXXXXXXXXFEPQSTSTILENSVFPWTDIGQEKDTRAHLVAELKWPDSFAETT 1352
P FE QSTS++LE+SVFPWTD+ +K+++ HL ELKWPD T
Sbjct: 680 PSSSSSRGSSGSNSLGFERQSTSSLLESSVFPWTDLTPDKNSQVHLEEELKWPDLLHGTF 501
Query: 1353 T 1355
T
Sbjct: 500 T 498
Score = 62.0 bits (129), Expect(2) = 3e-016
Identities = 32/65 (49%), Positives = 38/65 (58%)
Frame = -2 / +3
Query: 1547 T*CLDILKR*LHSLQVLVIHVWCYXXXXXXXXXLEPRSTYPFYVELALCLDHIIIKRLAL 1368
T CLDILKR HSLQ+LVI + Y L P T YVELAL D+I ++ LA
Sbjct: 294 TCCLDILKRQGHSLQILVIQI*YYLQMLLWLQILRPGCTEALYVELALGFDNIFVQ*LAK 473
Query: 1367 VLHDC 1353
+LH C
Sbjct: 474 ILHRC 488
Score = 61.6 bits (128), Expect(2) = 7e-015
Identities = 31/63 (49%), Positives = 36/63 (57%)
Frame = -1 / +2
Query: 1548 NIMPRYSQKIVAFFASPCHTCLVLPXXXXXXADSGTKKHISLLC*IGSLP*SHHHKAFGS 1369
N++PRYSQK F A+PCHT L+LP AD T+ H LC*IGS * H G
Sbjct: 293 NMLPRYSQKTRTFSANPCHTNLILPADVAVAADFETRLHRGPLC*IGSRL**HLRTVTG* 472
Query: 1368 GSA 1360
SA
Sbjct: 473 DSA 481
Score = 55.1 bits (114), Expect(2) = 1e-025
Identities = 27/48 (56%), Positives = 33/48 (68%)
Frame = -3 / +1
Query: 1360 MTVVVSAKESGHLSSATR*ALVSFSCPMSVHGKTLFSRIVLVLCGSNP 1217
++V V +SGHLSS++R* + S SVHGKTL SR LVLC SNP
Sbjct: 493 VSVNVPWSKSGHLSSSSR*TWLFLSGVKSVHGKTLLSRSELVLCRSNP 636
Score = 48.7 bits (100), Expect(2) = 7e-023
Identities = 21/42 (50%), Positives = 27/42 (64%)
Frame = +1 / -3
Query: 1210 TVWDLNHRARAQFWRTVSSHGQTLDKKKIQGLT**RNLSGLT 1335
T WDL+ +A+A FW+ V SHGQ + KI T +N SGLT
Sbjct: 643 TAWDLSGKAQAHFWKVVFSHGQI*HQIKIAKFTLRKNSSGLT 518
Score = 45.5 bits (93), Expect(2) = 3e-016
Identities = 23/44 (52%), Positives = 26/44 (59%)
Frame = -1 / +2
Query: 1347 FRQRSQAT*VPLLGEPLYLFLVQCLSMGRHCSPELCSCSVVQIP 1216
F SQAT*V GE Y +LV LSMG+H PE+ C QIP
Sbjct: 506 FHGASQAT*VLPQGELGYFYLVLNLSMGKHYFPEVSLCFAAQIP 637
Score = 42.3 bits (86), Expect(2) = 4e-018
Identities = 23/48 (47%), Positives = 27/48 (56%)
Frame = +2 / -1
Query: 1217 GI*TTEHEHNSGEQCLPMDRHWTRKRYKGSPSSGT*VA*LLCRNDHSH 1360
GI* +H+ SG+ C PMDR TR + SP T VA*L N H H
Sbjct: 636 GI*AAKHKLTSGK*CFPMDRFNTR*K*PSSP*GRTQVA*LAPWNIHGH 493
Score = 41.4 bits (84), Expect(2) = 7e-015
Identities = 20/42 (47%), Positives = 24/42 (57%)
Frame = -2 / +3
Query: 1334 VRPLKFRY*VSPCIFFLSNVCPWEDTVLQNCARALWFKSHTV 1209
VRPL+F V+ IF +CPWE+T Q A AL KS V
Sbjct: 519 VRPLEFFLKVNLAIFIWC*ICPWENTTFQK*ACALPLKSQAV 644
Score = 24.0 bits (46), Expect(3) = 1e-037
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = +3 / -3
Query: 1650 DTEIILHSCSSVEELAISRK 1709
+TEI +CSSV++ A+ K
Sbjct: 169 ETEINTDNCSSVKDTAVHEK 110
>gb|CN140754.1|CN140754 OX1_46_F09.g1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_46_F09_A002 5', mRNA sequence
Length = 439
Score = 128 bits (274), Expect(2) = 1e-037
Identities = 45/74 (60%), Positives = 62/74 (83%)
Frame = +3 / +2
Query: 360 GCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAA 539
G W ++P+ GL+RCGKSCRLRW+NYLRP++K G F+++E+ +I+ L+ +G+RWS IAA
Sbjct: 218 GNWIALPQKIGLKRCGKSCRLRWLNYLRPNIKHGGFSEEEDRIILSLYISIGSRWSIIAA 397
Query: 540 QLPGRTDNEIKNLW 581
QLPGRTDN+IKN W
Sbjct: 398 QLPGRTDNDIKNYW 439
Score = 64.8 bits (135), Expect(2) = 5e-012
Identities = 27/63 (42%), Positives = 38/63 (60%)
Frame = -2 / -1
Query: 581 P*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECPSLEVWPQIVYPPQPTTLSA 402
P +L +I+ PP QLR RPP V+ D F+LGE L+VWP++V PP+ L+
Sbjct: 439 PVVLYVIVRPPRQLRRYYRPPAAYADVEAKDYSVFLLGEPTVLDVWPEVVEPPEAAALAT 260
Query: 401 PLK 393
PL+
Sbjct: 259 PLQ 251
Score = 51.0 bits (105), Expect(2) = 1e-037
Identities = 19/35 (54%), Positives = 25/35 (71%)
Frame = +3 / +2
Query: 258 MGRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHG 362
MGR CC K ++KG WSPEED KL ++I ++G G
Sbjct: 113 MGRAPCCDKATVKKGPWSPEEDAKLKSYIEQNGTG 217
Score = 42.3 bits (86), Expect = 0.026
Identities = 17/21 (80%), Positives = 18/21 (85%)
Frame = -3 / -2
Query: 574 FLISLSVLPGSCAAI*DHLFP 512
F +SLSVLPGSCAAI DHL P
Sbjct: 432 FFMSLSVLPGSCAAIIDHLLP 370
Score = 28.6 bits (56), Expect(2) = 5e-012
Identities = 17/35 (48%), Positives = 19/35 (54%)
Frame = -2 / -1
Query: 362 AMAMLCYVIHEFLILLRGPEPLSQLLLVAARMPPH 258
A A+L V E +LLR P L LVAAR PH
Sbjct: 217 AGAVLLDVGLELGVLLRRPRTLLHSSLVAARSSPH 113
>gb|CX608850.1|CX608850 ANR1_9_D06.b1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_9_D06_A002 3', mRNA sequence
Length = 748
Score = 105 bits (225), Expect(3) = 1e-037
Identities = 46/83 (55%), Positives = 54/83 (65%)
Frame = +3 / +2
Query: 1335 SFAETTTVMQNQSQTLYDDVIKAESQFNIEGICASWFXXXXXXXXXXVAPDMYDKDLQRM 1514
+F +T MQN SQ+LY+DVIKAESQFNIEG+CA+W V D+YDKDLQRM
Sbjct: 173 TFTDTPATMQNLSQSLYEDVIKAESQFNIEGLCAAWSQNLQPQQHLQVVSDLYDKDLQRM 352
Query: 1515 QLSFENI*ALCSTTWNRADQKKQ 1583
LSFENI*A C QK +
Sbjct: 353 SLSFENI*ATCCMQGTEK*QKAE 421
Score = 84.5 bits (178), Expect(2) = 1e-025
Identities = 42/70 (60%), Positives = 46/70 (65%)
Frame = -3 / -2
Query: 1552 VEHNA*IFSKDSCILCKSLSYMSGATXXXXXXX*FWNQEAHIPSMLNWLSALITSS*SVW 1373
++H A*IFSKD ILCKSLSY S T F +Q A PSMLNWLSALITSS S W
Sbjct: 390 MQHVA*IFSKDKDILCKSLSYKSDTTCRCCCGCRF*DQAAQRPSMLNWLSALITSSYSDW 211
Query: 1372 LWFCMTVVVS 1343
L FC+ VS
Sbjct: 210 LRFCIVAGVS 181
Score = 81.3 bits (171), Expect(2) = 7e-023
Identities = 37/65 (56%), Positives = 43/65 (66%)
Frame = +1 / +3
Query: 1354 QSCRTRAKRFMMM*SRQRANST*KGYVLLGSRISSHSNSCR*HQTCMTRTCKECNYLLRI 1533
Q CR A M S+ RANST*+ V G +I SHSN CR*+Q CMTR C+EC LLRI
Sbjct: 192 QRCRILASHCTKMLSKPRANST*RASVQPGLKICSHSNICR*YQICMTRICRECPCLLRI 371
Query: 1534 SRHYV 1548
SR +V
Sbjct: 372 SRQHV 386
Score = 71.6 bits (150), Expect(2) = 4e-018
Identities = 33/64 (51%), Positives = 38/64 (59%)
Frame = +2 / +1
Query: 1361 AEPEPNAL**CDQGREPIQHRRDMCFLVPESXXXXXXXGSTRHV*QGLAKNATIF*EYLG 1540
AE P + C Q REPIQHR +C LV +S GS R V*QG A+N +F*EYLG
Sbjct: 199 AES*PVTVRRCYQSREPIQHRGPLCSLVSKSAATATSAGSIRFV*QGFAENVLVF*EYLG 378
Query: 1541 IMFH 1552
M H
Sbjct: 379 NMLH 390
Score = 67.5 bits (141), Expect(3) = 1e-037
Identities = 26/45 (57%), Positives = 34/45 (75%)
Frame = +3 / +2
Query: 1221 FEPQSTSTILENSVFPWTDIGQEKDTRAHLVAELKWPDSFAETTT 1355
FE QSTS++LE+SVFPWTD+ +K+++ HL ELKWPD T T
Sbjct: 47 FERQSTSSLLESSVFPWTDLTPDKNSQVHLEEELKWPDLLHGTFT 181
Score = 62.0 bits (129), Expect(2) = 3e-016
Identities = 32/65 (49%), Positives = 38/65 (58%)
Frame = -2 / -1
Query: 1547 T*CLDILKR*LHSLQVLVIHVWCYXXXXXXXXXLEPRSTYPFYVELALCLDHIIIKRLAL 1368
T CLDILKR HSLQ+LVI + Y L P T YVELAL D+I ++ LA
Sbjct: 385 TCCLDILKRQGHSLQILVIQI*YYLQMLLWLQILRPGCTEALYVELALGFDNIFVQ*LAK 206
Query: 1367 VLHDC 1353
+LH C
Sbjct: 205 ILHRC 191
Score = 61.6 bits (128), Expect(2) = 7e-015
Identities = 31/63 (49%), Positives = 36/63 (57%)
Frame = -1 / -3
Query: 1548 NIMPRYSQKIVAFFASPCHTCLVLPXXXXXXADSGTKKHISLLC*IGSLP*SHHHKAFGS 1369
N++PRYSQK F A+PCHT L+LP AD T+ H LC*IGS * H G
Sbjct: 386 NMLPRYSQKTRTFSANPCHTNLILPADVAVAADFETRLHRGPLC*IGSRL**HLRTVTG* 207
Query: 1368 GSA 1360
SA
Sbjct: 206 DSA 198
Score = 55.1 bits (114), Expect(2) = 1e-025
Identities = 27/48 (56%), Positives = 33/48 (68%)
Frame = -3 / -2
Query: 1360 MTVVVSAKESGHLSSATR*ALVSFSCPMSVHGKTLFSRIVLVLCGSNP 1217
++V V +SGHLSS++R* + S SVHGKTL SR LVLC SNP
Sbjct: 186 VSVNVPWSKSGHLSSSSR*TWLFLSGVKSVHGKTLLSRSELVLCRSNP 43
Score = 48.7 bits (100), Expect(2) = 7e-023
Identities = 21/42 (50%), Positives = 27/42 (64%)
Frame = +1 / +3
Query: 1210 TVWDLNHRARAQFWRTVSSHGQTLDKKKIQGLT**RNLSGLT 1335
T WDL+ +A+A FW+ V SHGQ + KI T +N SGLT
Sbjct: 36 TAWDLSGKAQAHFWKVVFSHGQI*HQIKIAKFTLRKNSSGLT 161
Score = 45.5 bits (93), Expect(2) = 3e-016
Identities = 23/44 (52%), Positives = 26/44 (59%)
Frame = -1 / -3
Query: 1347 FRQRSQAT*VPLLGEPLYLFLVQCLSMGRHCSPELCSCSVVQIP 1216
F SQAT*V GE Y +LV LSMG+H PE+ C QIP
Sbjct: 173 FHGASQAT*VLPQGELGYFYLVLNLSMGKHYFPEVSLCFAAQIP 42
Score = 42.3 bits (86), Expect(2) = 4e-018
Identities = 23/48 (47%), Positives = 27/48 (56%)
Frame = +2 / +1
Query: 1217 GI*TTEHEHNSGEQCLPMDRHWTRKRYKGSPSSGT*VA*LLCRNDHSH 1360
GI* +H+ SG+ C PMDR TR + SP T VA*L N H H
Sbjct: 43 GI*AAKHKLTSGK*CFPMDRFNTR*K*PSSP*GRTQVA*LAPWNIHGH 186
Score = 41.4 bits (84), Expect(2) = 7e-015
Identities = 20/42 (47%), Positives = 24/42 (57%)
Frame = -2 / -1
Query: 1334 VRPLKFRY*VSPCIFFLSNVCPWEDTVLQNCARALWFKSHTV 1209
VRPL+F V+ IF +CPWE+T Q A AL KS V
Sbjct: 160 VRPLEFFLKVNLAIFIWC*ICPWENTTFQK*ACALPLKSQAV 35
Score = 24.0 bits (46), Expect(3) = 1e-037
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = +3 / +3
Query: 1650 DTEIILHSCSSVEELAISRK 1709
+TEI +CSSV++ A+ K
Sbjct: 510 ETEINTDNCSSVKDTAVHEK 569
>gb|CW344541.1|CW344541 104_847_11488007_148_36198_092 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11488007, DNA
sequence
Length = 620
Score = 94.5 bits (200), Expect(2) = 2e-037
Identities = 35/45 (77%), Positives = 40/45 (88%)
Frame = +3 / -1
Query: 387 AGLQRCGKSCRLRWINYLRPDLKRGAFAQDEEDLIIELHAVLGNR 521
AGLQRCGKSCRLRWINYLRPD++RG F +EE LII LHA++GNR
Sbjct: 284 AGLQRCGKSCRLRWINYLRPDIRRGRFTAEEEKLIISLHAIVGNR 150
Score = 87.7 bits (185), Expect(2) = 2e-037
Identities = 29/45 (64%), Positives = 38/45 (84%)
Frame = +3 / -1
Query: 258 MGRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAG 392
MG H CC +QK+++GLWSPEE+EKL+ +IT HG+GCWS VP+ AG
Sbjct: 575 MGHHCCCNQQKVKRGLWSPEEEEKLIRYITTHGYGCWSEVPEKAG 441
Score = 51.0 bits (105), Expect = 6e-005
Identities = 26/46 (56%), Positives = 29/46 (63%)
Frame = +1 / -2
Query: 253 LRWGGILAATSRS*ERGSGPLRRMRNS*IT*QSMAMAAGALFPNSL 390
L WG AATSR * GSGPLR+ ++S T MAMAAGA P L
Sbjct: 580 LAWGITAAATSRR*RGGSGPLRKRKSSSDTSPPMAMAAGARSPRKL 443
Score = 50.6 bits (104), Expect = 9e-005
Identities = 21/44 (47%), Positives = 27/44 (61%)
Frame = +2 / -3
Query: 260 GEAFLLLQAEAEKGALVP*GG*ETHESHNKAWPWLLELCSQTRW 391
G + LL AE E+GALVP*G + H+ H+ W WLLE + W
Sbjct: 573 GASLLLQPAEGEEGALVP*GRGKAHQIHHHPWLWLLERGPRESW 442
Score = 48.3 bits (99), Expect(2) = 3e-010
Identities = 24/44 (54%), Positives = 28/44 (63%)
Frame = -2 / +3
Query: 389 SEFGNRAPAAMAMLCYVIHEFLILLRGPEPLSQLLLVAARMPPH 258
S G+ APAA+AM V E + LRGPEP LLLVAA + PH
Sbjct: 444 SFLGDLAPAAIAMGGDVSDELFLFLRGPEPPLHLLLVAAAVMPH 575
Score = 42.3 bits (86), Expect(2) = 3e-010
Identities = 17/42 (40%), Positives = 25/42 (59%)
Frame = -2 / +3
Query: 521 PVPEDSVQLDDEVFFVLGECPSLEVWPQIVYPPQPTTLSAPL 396
PV + V+ DD++ + E PS +V ++V PPQP L PL
Sbjct: 150 PVANNGVEADDQLLLLRREPPSPDVRSEVVDPPQPAALPTPL 275
Score = 41.4 bits (84), Expect(2) = 2e-006
Identities = 22/46 (47%), Positives = 23/46 (50%)
Frame = -3 / +1
Query: 523 HLFPRTACXXXXXXXXSWANAPLLRSGLR*FIHLSLQLFPHL*SPA 386
+L P A S N P L SGLR* IH S QLFPH PA
Sbjct: 148 YLLPTMAWRLMISFSSSAVNRPRLMSGLR*LIHRSRQLFPHRCRPA 285
Score = 36.3 bits (73), Expect(2) = 2e-006
Identities = 19/37 (51%), Positives = 21/37 (56%)
Frame = -1 / +2
Query: 369 SSSHGHALLCDS*VSHPPQGTRAPFSASACSSKNASP 259
SSSH H C * PQGTRAP S SA S + +P
Sbjct: 464 SSSHSHGW*CI**AFPLPQGTRAPSSPSAGCSSSDAP 574
>gb|CW166340.1|CW166340 104_575_11153002_116_36764_045 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11153002, DNA
sequence
Length = 661
Score = 75.8 bits (159), Expect(3) = 3e-037
Identities = 28/46 (60%), Positives = 37/46 (80%)
Frame = +3 / -2
Query: 384 LAGLQRCGKSCRLRWINYLRPDLKRGAFAQDEEDLIIELHAVLGNR 521
++GL+R GKSCRLRW+NYL+PDL R ++ EEDLI+ L +LGNR
Sbjct: 324 ISGLKRSGKSCRLRWMNYLQPDLSREPISKQEEDLIVSLQKLLGNR 187
Score = 64.8 bits (135), Expect(3) = 3e-037
Identities = 24/37 (64%), Positives = 31/37 (83%)
Frame = +3 / -1
Query: 282 KQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAG 392
K+ +RKGLWSP+EDE+L +HIT +G G WSSV +LAG
Sbjct: 571 KKLMRKGLWSPDEDERLYSHITHYGVGTWSSVAELAG 461
Score = 62.0 bits (129), Expect(3) = 3e-037
Identities = 24/29 (82%), Positives = 26/29 (89%)
Frame = +3 / -3
Query: 519 RWSQIAAQLPGRTDNEIKNLWNSCIKKKL 605
RWS IAA++PGRTDNEIKN WNS IKKKL
Sbjct: 89 RWSAIAARMPGRTDNEIKNYWNSRIKKKL 3
Score = 52.8 bits (109), Expect(3) = 1e-017
Identities = 25/46 (54%), Positives = 28/46 (60%)
Frame = -3 / +2
Query: 526 DHLFPRTACXXXXXXXXSWANAPLLRSGLR*FIHLSLQLFPHL*SP 389
++LFPR+ C LLRSG R*FIHLSLQLFP L SP
Sbjct: 182 NYLFPRSFCKDTMRSSSCLEMGSLLRSGCR*FIHLSLQLFPLLFSP 319
Score = 51.5 bits (106), Expect(3) = 1e-017
Identities = 23/32 (71%), Positives = 25/32 (78%)
Frame = -3 / +1
Query: 604 SFFLMHEFHRFLISLSVLPGSCAAI*DHLFPR 509
SFFLM EF FLISLSVLPG AAI DHL+ +
Sbjct: 4 SFFLMREFQ*FLISLSVLPGILAAIADHLYKK 99
Score = 48.3 bits (99), Expect(2) = 8e-011
Identities = 22/44 (50%), Positives = 28/44 (63%)
Frame = -2 / +1
Query: 521 PVPEDSVQLDDEVFFVLGECPSLEVWPQIVYPPQPTTLSAPLKP 390
PV + +Q DEV F+LG+ EVW QIV+P Q L APL+P
Sbjct: 187 PVS*EFLQGYDEVLFLLGDGLPAEVWLQIVHPSQSAALPAPLQP 318
Score = 40.9 bits (83), Expect(2) = 8e-011
Identities = 18/30 (60%), Positives = 21/30 (70%)
Frame = -2 / +3
Query: 605 QLLLDARVP*ILDLIISPPWQLRCNLRPPV 516
+LLLDA VP +LDLII P CN RPP+
Sbjct: 3 ELLLDA*VPVVLDLIICPSRHPCCNRRPPI 92
Score = 37.7 bits (76), Expect(2) = 0.020
Identities = 18/28 (64%), Positives = 21/28 (75%)
Frame = +2 / -2
Query: 521 VVSNCSAAARED***DQESMELVHQEEA 604
VV +CS A +D **DQE +EL HQEEA
Sbjct: 87 VVCDCSKDAWKDR**DQELLELTHQEEA 4
Score = 34.1 bits (68), Expect = 7.9
Identities = 15/23 (65%), Positives = 16/23 (69%)
Frame = +1 / -1
Query: 535 QRSCQGGLIMRSRIYGTRASRRS 603
Q+ C G IMRSR GT ASRRS
Sbjct: 73 QQGCLEGQIMRSRTTGTHASRRS 5
Score = 31.3 bits (62), Expect(3) = 1e-017
Identities = 15/35 (42%), Positives = 22/35 (62%)
Frame = -2 / +2
Query: 383 FGNRAPAAMAMLCYVIHEFLILLRGPEPLSQLLLV 279
FG+ P + A++C V + L+L+R P PL LLV
Sbjct: 470 FGDGGPGSNAVVCDVAIKPLVLVR*P*PLPHQLLV 574
Score = 26.3 bits (51), Expect(2) = 0.020
Identities = 15/30 (50%), Positives = 17/30 (56%)
Frame = +1 / -3
Query: 382 NSLGFKGAERVVG*GG*TI*GQTSREGHSP 471
+S G +GA R * G*TI QTS SP
Sbjct: 326 SSQG*RGAGRAAD*DG*TICSQTSAGSPSP 237
>gb|CW261147.1|CW261147 104_728_11229348_148_35173_046 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11229348, DNA
sequence
Length = 618
Score = 156 bits (336), Expect = 9e-037
Identities = 58/90 (64%), Positives = 69/90 (76%)
Frame = +3 / -2
Query: 252 VEMGRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWI 431
V MGR CC K KG W+ EEDE+L+ +I HG GCW S+PK AGL RCGKSCRLRW+
Sbjct: 440 VAMGRSPCCEKAHTNKGAWTKEEDERLVAYIRAHGEGCWRSLPKAAGLPRCGKSCRLRWM 261
Query: 432 NYLRPDLKRGAFAQDEEDLIIELHAVLGNR 521
NYLRPDLKRG F DE++LII LH++LGN+
Sbjct: 260 NYLRPDLKRGNFTDDEDELIIRLHSLLGNK 171
Score = 90.9 bits (192), Expect = 6e-017
Identities = 40/87 (45%), Positives = 56/87 (64%)
Frame = -2 / +3
Query: 518 VPEDSVQLDDEVFFVLGECPSLEVWPQIVYPPQPTTLSAPLKPSEFGNRAPAAMAMLCYV 339
V E++VQ DDE+ V+GE +LEV ++V+PPQP L+A + G RAPA + V
Sbjct: 174 VAEEAVQADDELVLVVGEVAALEVRAEVVHPPQPAALAAARQARRLGQRAPAPFPVRPDV 353
Query: 338 IHEFLILLRGPEPLSQLLLVAARMPPH 258
H+ L+LL GP L ++ L+AAR PPH
Sbjct: 354 RHQPLVLLLGPRALVRVRLLAARRPPH 434
Score = 64.8 bits (135), Expect = 5e-009
Identities = 30/58 (51%), Positives = 32/58 (55%)
Frame = -3 / +1
Query: 523 HLFPRTACXXXXXXXXSWANAPLLRSGLR*FIHLSLQLFPHL*SPASLGTELQQPWPC 350
HL PR C S P LRSG R*FIH SLQL P PA+LG+E Q P PC
Sbjct: 169 HLLPRRLCRRMMSSSSSSVKLPRLRSGRR*FIHRSLQLLPQRGRPAALGSERQHPSPC 342
>gb|CW288510.1|CW288510 104_767_11411990_148_35540_063 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11411990, DNA
sequence
Length = 673
Score = 156 bits (336), Expect = 9e-037
Identities = 57/89 (64%), Positives = 70/89 (78%)
Frame = +3 / +3
Query: 258 MGRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINY 437
MGR CC K KG W+ EED++L+ +I HG GCW S+PK AGL RCGKSCRLRWINY
Sbjct: 297 MGRSPCCEKAHTNKGAWTKEEDQRLVAYIKAHGEGCWRSLPKAAGLLRCGKSCRLRWINY 476
Query: 438 LRPDLKRGAFAQDEEDLIIELHAVLGNRW 524
LRPDLKRG F Q+E++LII+LH +LGN++
Sbjct: 477 LRPDLKRGNFTQEEDELIIKLHQILGNKY 563
Score = 81.3 bits (171), Expect = 5e-014
Identities = 40/87 (45%), Positives = 53/87 (60%)
Frame = -2 / -3
Query: 518 VPEDSVQLDDEVFFVLGECPSLEVWPQIVYPPQPTTLSAPLKPSEFGNRAPAAMAMLCYV 339
V ED V+LDDE F+LGE +LEV ++V PP+ L+A + G R PAA A+ V
Sbjct: 557 VSEDLVELDDEFVFLLGEVAALEVGAEVVDPPEAAALAAAQQARRLG*RPPAAFAVRLDV 378
Query: 338 IHEFLILLRGPEPLSQLLLVAARMPPH 258
E L+LL P L ++ L+AAR PPH
Sbjct: 377 GDEPLVLLLCPRALVRVRLLAARRPPH 297
Score = 63.4 bits (132), Expect = 1e-008
Identities = 29/61 (47%), Positives = 34/61 (55%)
Frame = -3 / -1
Query: 523 HLFPRTACXXXXXXXXSWANAPLLRSGLR*FIHLSLQLFPHL*SPASLGTELQQPWPCFV 344
+LFPR SW P LRSG R* IH QL P PA+LG++LQQP PC +
Sbjct: 562 YLFPRIWWSLMMSSSSSWVKLPRLRSGRR*LIHRRRQLLPQRSRPAALGSDLQQPSPCAL 383
Query: 343 M 341
M
Sbjct: 382 M 380
Score = 43.7 bits (89), Expect = 0.010
Identities = 28/73 (38%), Positives = 31/73 (42%)
Frame = +1 / +1
Query: 253 LRWGGILAATSRS*ERGSGPLRRMRNS*IT*QSMAMAAGALFPNSLGFKGAERVVG*GG* 432
L WGG AA R+ R G RR R S T + A AAG +P A R GG
Sbjct: 292 LPWGGRRAARRRTRTRARGQRRRTRGSSPTSRRTAKAAGGRYPRRRACCAAARAAASGGS 471
Query: 433 TI*GQTSREGHSP 471
T TS SP
Sbjct: 472 TTSAPTSSAATSP 510
>gb|CW316411.1|CW316411 104_807_11472880_148_35845_050 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11472880, DNA
sequence
Length = 633
Score = 156 bits (336), Expect = 9e-037
Identities = 58/90 (64%), Positives = 69/90 (76%)
Frame = +3 / +3
Query: 252 VEMGRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWI 431
V MGR CC K KG W+ EEDE+L+ +I HG GCW S+PK AGL RCGKSCRLRW+
Sbjct: 330 VAMGRSPCCEKAHTNKGAWTKEEDERLVAYIRAHGEGCWRSLPKAAGLPRCGKSCRLRWM 509
Query: 432 NYLRPDLKRGAFAQDEEDLIIELHAVLGNR 521
NYLRPDLKRG F DE++LII LH++LGN+
Sbjct: 510 NYLRPDLKRGNFTDDEDELIIRLHSLLGNK 599
Score = 90.9 bits (192), Expect = 6e-017
Identities = 40/87 (45%), Positives = 56/87 (64%)
Frame = -2 / -2
Query: 518 VPEDSVQLDDEVFFVLGECPSLEVWPQIVYPPQPTTLSAPLKPSEFGNRAPAAMAMLCYV 339
V E++VQ DDE+ V+GE +LEV ++V+PPQP L+A + G RAPA + V
Sbjct: 596 VAEEAVQADDELVLVVGEVAALEVRAEVVHPPQPAALAAARQARRLGQRAPAPFPVRPDV 417
Query: 338 IHEFLILLRGPEPLSQLLLVAARMPPH 258
H+ L+LL GP L ++ L+AAR PPH
Sbjct: 416 RHQPLVLLLGPRALVRVRLLAARRPPH 336
Score = 64.8 bits (135), Expect = 5e-009
Identities = 30/58 (51%), Positives = 32/58 (55%)
Frame = -3 / -3
Query: 523 HLFPRTACXXXXXXXXSWANAPLLRSGLR*FIHLSLQLFPHL*SPASLGTELQQPWPC 350
HL PR C S P LRSG R*FIH SLQL P PA+LG+E Q P PC
Sbjct: 601 HLLPRRLCRRMMSSSSSSVKLPRLRSGRR*FIHRSLQLLPQRGRPAALGSERQHPSPC 428
>gb|CW440051.1|CW440051 fsbb001f158i03k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f158i03, DNA
sequence
Length = 524
Score = 156 bits (336), Expect = 9e-037
Identities = 57/89 (64%), Positives = 70/89 (78%)
Frame = +3 / +2
Query: 258 MGRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINY 437
MGR CC K KG W+ EED++L+ +I HG GCW S+PK AGL RCGKSCRLRWINY
Sbjct: 140 MGRSPCCEKAHTNKGAWTKEEDQRLVAYIKAHGEGCWRSLPKAAGLLRCGKSCRLRWINY 319
Query: 438 LRPDLKRGAFAQDEEDLIIELHAVLGNRW 524
LRPDLKRG F Q+E++LII+LH +LGN++
Sbjct: 320 LRPDLKRGNFTQEEDELIIKLHQILGNKY 406
Score = 81.3 bits (171), Expect = 5e-014
Identities = 40/87 (45%), Positives = 53/87 (60%)
Frame = -2 / -2
Query: 518 VPEDSVQLDDEVFFVLGECPSLEVWPQIVYPPQPTTLSAPLKPSEFGNRAPAAMAMLCYV 339
V ED V+LDDE F+LGE +LEV ++V PP+ L+A + G R PAA A+ V
Sbjct: 400 VSEDLVELDDEFVFLLGEVAALEVGAEVVDPPEAAALAAAQQARRLG*RPPAAFAVRLDV 221
Query: 338 IHEFLILLRGPEPLSQLLLVAARMPPH 258
E L+LL P L ++ L+AAR PPH
Sbjct: 220 GDEPLVLLLCPRALVRVRLLAARRPPH 140
Score = 63.4 bits (132), Expect = 1e-008
Identities = 29/61 (47%), Positives = 34/61 (55%)
Frame = -3 / -3
Query: 523 HLFPRTACXXXXXXXXSWANAPLLRSGLR*FIHLSLQLFPHL*SPASLGTELQQPWPCFV 344
+LFPR SW P LRSG R* IH QL P PA+LG++LQQP PC +
Sbjct: 405 YLFPRIWWSLMMSSSSSWVKLPRLRSGRR*LIHRRRQLLPQRSRPAALGSDLQQPSPCAL 226
Query: 343 M 341
M
Sbjct: 225 M 223
Score = 43.7 bits (89), Expect = 0.010
Identities = 28/73 (38%), Positives = 31/73 (42%)
Frame = +1 / +3
Query: 253 LRWGGILAATSRS*ERGSGPLRRMRNS*IT*QSMAMAAGALFPNSLGFKGAERVVG*GG* 432
L WGG AA R+ R G RR R S T + A AAG +P A R GG
Sbjct: 135 LPWGGRRAARRRTRTRARGQRRRTRGSSPTSRRTAKAAGGRYPRRRACCAAARAAASGGS 314
Query: 433 TI*GQTSREGHSP 471
T TS SP
Sbjct: 315 TTSAPTSSAATSP 353
>gb|CW440141.1|CW440141 fsbb001f158k07k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f158k07, DNA
sequence
Length = 483
Score = 156 bits (336), Expect = 9e-037
Identities = 57/89 (64%), Positives = 70/89 (78%)
Frame = +3 / +3
Query: 258 MGRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINY 437
MGR CC K KG W+ EED++L+ +I HG GCW S+PK AGL RCGKSCRLRWINY
Sbjct: 123 MGRSPCCEKAHTNKGAWTKEEDQRLVAYIKAHGEGCWRSLPKAAGLLRCGKSCRLRWINY 302
Query: 438 LRPDLKRGAFAQDEEDLIIELHAVLGNRW 524
LRPDLKRG F Q+E++LII+LH +LGN++
Sbjct: 303 LRPDLKRGNFTQEEDELIIKLHQILGNKY 389
Score = 81.3 bits (171), Expect = 5e-014
Identities = 40/87 (45%), Positives = 53/87 (60%)
Frame = -2 / -2
Query: 518 VPEDSVQLDDEVFFVLGECPSLEVWPQIVYPPQPTTLSAPLKPSEFGNRAPAAMAMLCYV 339
V ED V+LDDE F+LGE +LEV ++V PP+ L+A + G R PAA A+ V
Sbjct: 383 VSEDLVELDDEFVFLLGEVAALEVGAEVVDPPEAAALAAAQQARRLG*RPPAAFAVRLDV 204
Query: 338 IHEFLILLRGPEPLSQLLLVAARMPPH 258
E L+LL P L ++ L+AAR PPH
Sbjct: 203 GDEPLVLLLCPRALVRVRLLAARRPPH 123
Score = 63.4 bits (132), Expect = 1e-008
Identities = 29/61 (47%), Positives = 34/61 (55%)
Frame = -3 / -3
Query: 523 HLFPRTACXXXXXXXXSWANAPLLRSGLR*FIHLSLQLFPHL*SPASLGTELQQPWPCFV 344
+LFPR SW P LRSG R* IH QL P PA+LG++LQQP PC +
Sbjct: 388 YLFPRIWWSLMMSSSSSWVKLPRLRSGRR*LIHRRRQLLPQRSRPAALGSDLQQPSPCAL 209
Query: 343 M 341
M
Sbjct: 208 M 206
Score = 43.7 bits (89), Expect = 0.010
Identities = 28/73 (38%), Positives = 31/73 (42%)
Frame = +1 / +1
Query: 253 LRWGGILAATSRS*ERGSGPLRRMRNS*IT*QSMAMAAGALFPNSLGFKGAERVVG*GG* 432
L WGG AA R+ R G RR R S T + A AAG +P A R GG
Sbjct: 118 LPWGGRRAARRRTRTRARGQRRRTRGSSPTSRRTAKAAGGRYPRRRACCAAARAAASGGS 297
Query: 433 TI*GQTSREGHSP 471
T TS SP
Sbjct: 298 TTSAPTSSAATSP 336
>gb|AY860968.1| Sorghum bicolor yellow seed1 (y1) gene, y1-rr allele, complete cds;
and y2 pseudogene, complete sequence
Length = 22400
Score = 87.7 bits (185), Expect(4) = 1e-036
Identities = 33/44 (75%), Positives = 39/44 (88%)
Frame = +3 / +2
Query: 390 GLQRCGKSCRLRWINYLRPDLKRGAFAQDEEDLIIELHAVLGNR 521
GL RCGKSCRLRWINYLR D+KRG +++EED+II+LHA LGNR
Sbjct: 2801 GLLRCGKSCRLRWINYLRADVKRGNISKEEEDIIIKLHATLGNR 2932
Score = 66.1 bits (138), Expect(3) = 2e-020
Identities = 25/44 (56%), Positives = 34/44 (77%)
Frame = -2 / -2
Query: 521 PVPEDSVQLDDEVFFVLGECPSLEVWPQIVYPPQPTTLSAPLKP 390
PV E V+LDD+V F+LG+ PSL+V P++V PPQP L+AP +P
Sbjct: 2932 PVAEGGVELDDDVLFLLGDVPSLDVGPKVVDPPQPAALAAPEQP 2801
Score = 65.2 bits (136), Expect(4) = 1e-036
Identities = 24/45 (53%), Positives = 31/45 (68%)
Frame = +3 / +1
Query: 258 MGRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAG 392
MGR CC K L++G W+ EED+ L N+I +HG G W S+PK AG
Sbjct: 2407 MGRAPCCDKVGLKRGRWTAEEDQILANYIAEHGEGSWRSLPKNAG 2541
Score = 57.0 bits (118), Expect(2) = 2e-013
Identities = 20/39 (51%), Positives = 27/39 (69%)
Frame = +3 / +3
Query: 273 CCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLA 389
CC K L++G W+ EED+ L N+I +HG G W S+PK A
Sbjct: 17451 CCEKVGLKRGRWTAEEDQILANYIAEHGEGSWRSLPKNA 17567
Score = 55.6 bits (115), Expect(3) = 2e-020
Identities = 22/41 (53%), Positives = 29/41 (70%)
Frame = -2 / -3
Query: 380 GNRAPAAMAMLCYVIHEFLILLRGPEPLSQLLLVAARMPPH 258
G R P ++A+LC V+ E+L+LLR P P + LVAAR PPH
Sbjct: 2529 GQRPPGSLAVLCNVVGEYLVLLRRPPPALEPHLVAARRPPH 2407
Score = 51.5 bits (106), Expect(4) = 1e-036
Identities = 18/29 (62%), Positives = 23/29 (79%)
Frame = +3 / +1
Query: 519 RWSQIAAQLPGRTDNEIKNLWNSCIKKKL 605
RWS IA+ PGRTDNEIKN WNS + +++
Sbjct: 7144 RWSLIASHFPGRTDNEIKNYWNSHLSRQI 7230
Score = 50.1 bits (103), Expect(2) = 2e-013
Identities = 18/29 (62%), Positives = 22/29 (75%)
Frame = +3 / +3
Query: 519 RWSQIAAQLPGRTDNEIKNLWNSCIKKKL 605
RWS I LPGRTDNEIKN WNS + +++
Sbjct: 19158 RWSLIVGNLPGRTDNEIKNHWNSHLSRQI 19244
Score = 44.1 bits (90), Expect(2) = 2e-004
Identities = 18/37 (48%), Positives = 26/37 (70%)
Frame = -2 / -1
Query: 380 GNRAPAAMAMLCYVIHEFLILLRGPEPLSQLLLVAAR 270
G R P ++A+LC V+ E+L+LLR P P + L+AAR
Sbjct: 17558 GQRPPGSLAVLCNVVGEYLVLLRRPPPALKPHLLAAR 17448
Score = 36.3 bits (73), Expect(2) = 1.2
Identities = 20/48 (41%), Positives = 22/48 (45%)
Frame = -3 / -3
Query: 523 HLFPRTACXXXXXXXXSWANAPLLRSGLR*FIHLSLQLFPHL*SPASL 380
+L PR A S PLL S R* IH S QL PH SP +
Sbjct: 2934 YLLPRVAWSLMMMSSSSLEMFPLLTSARR*LIHRSRQLLPHRSSPVHI 2791
Score = 33.6 bits (67), Expect(3) = 2e-020
Identities = 16/23 (69%), Positives = 16/23 (69%)
Frame = -3 / -1
Query: 586 EFHRFLISLSVLPGSCAAI*DHL 518
EF FLISLSV PG AI DHL
Sbjct: 7211 EFQ*FLISLSVRPGKWLAIRDHL 7143
Score = 32.2 bits (64), Expect(2) = 2e-004
Identities = 15/23 (65%), Positives = 15/23 (65%)
Frame = -3 / -2
Query: 586 EFHRFLISLSVLPGSCAAI*DHL 518
EF FLISLSV PG I DHL
Sbjct: 19225 EFQWFLISLSVRPGRLPTIRDHL 19157
Score = 30.9 bits (61), Expect(4) = 1e-036
Identities = 17/67 (25%), Positives = 32/67 (47%)
Frame = +3 / +2
Query: 630 THKPLTEADHGGAAPTISTERTSGSSDINPSSTGPLGNLSPLLSETAQSSMLMPVYDKNR 809
+HK +T + G + + +SGS I+ S T G + + ++ S ++ V NR
Sbjct: 12494 SHKMMTSSYPGQMSCESCAKESSGSESIDSSMTESSGATTTSAATSSDSGLMSAVVTSNR 12673
Query: 810 AETPNLA 830
A ++A
Sbjct: 12674 ALPVSMA 12694
Score = 26.3 bits (51), Expect(2) = 1.2
Identities = 16/46 (34%), Positives = 19/46 (41%)
Frame = -1 / -2
Query: 381 WEQSSSSHGHALLCDS*VSHPPQGTRAPFSASACSSKNASPSQRNA 244
W +S AL C VS PP + + A C S SPS A
Sbjct: 2530 WAATSRIPRRALQCSWRVSGPPPPSTSRA*APPCRSTAPSPSHAAA 2393
>gb|CW171329.1|CW171329 104_582_11155681_116_36525_013 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11155681, DNA
sequence
Length = 720
Score = 155 bits (333), Expect = 2e-036
Identities = 57/89 (64%), Positives = 69/89 (77%)
Frame = +3 / +2
Query: 258 MGRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINY 437
MGR CC K KG W+ EED++L+ +I HG GCW S+PK AGL RCGKSCRLRWINY
Sbjct: 374 MGRSPCCEKAHTNKGAWTKEEDDRLVAYIRAHGEGCWRSLPKAAGLMRCGKSCRLRWINY 553
Query: 438 LRPDLKRGAFAQDEEDLIIELHAVLGNRW 524
LRPDLKRG F DE+DLII+LH++LG ++
Sbjct: 554 LRPDLKRGNFTADEDDLIIKLHSLLGKQY 640
Score = 81.3 bits (171), Expect = 5e-014
Identities = 37/85 (43%), Positives = 52/85 (61%)
Frame = -2 / -3
Query: 512 EDSVQLDDEVFFVLGECPSLEVWPQIVYPPQPTTLSAPLKPSEFGNRAPAAMAMLCYVIH 333
E++VQLDDEV V GE +LEV ++V P + L+A + G R PA A+ V H
Sbjct: 628 EEAVQLDDEVVLVGGEVAALEVGAEVVDPAEAAALAAAHQSGRLGQRPPAPFAVRADVRH 449
Query: 332 EFLILLRGPEPLSQLLLVAARMPPH 258
+ ++LL GP L ++ L+AAR PPH
Sbjct: 448 QAVVLLLGPRALVRVRLLAARRPPH 374
Score = 49.2 bits (101), Expect = 2e-004
Identities = 24/58 (41%), Positives = 28/58 (48%)
Frame = -3 / -1
Query: 523 HLFPRTACXXXXXXXXSWANAPLLRSGLR*FIHLSLQLFPHL*SPASLGTELQQPWPC 350
+ PR C S P LRSG R* I QL P SPA+LG++ Q P PC
Sbjct: 639 YCLPRRLCSLMMRSSSSAVKLPRLRSGRR*LIQRRRQLLPQRISPAALGSDRQHPSPC 466
>gb|AF474132.1| Sorghum bicolor typical P-type R2R3 Myb protein (Myb63) gene,
partial cds
Length = 853
Score = 129 bits (277), Expect(2) = 3e-036
Identities = 51/85 (60%), Positives = 63/85 (74%)
Frame = +3 / +3
Query: 384 LAGLQRCGKSCRLRWINYLRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDN 563
L GL+R GKSCRLRW+NYLRPDL+RG E+ LI+ELH+ GNRWS+IA LPGRTDN
Sbjct: 465 LPGLRRTGKSCRLRWLNYLRPDLRRGNITAQEQLLILELHSRWGNRWSKIAQHLPGRTDN 644
Query: 564 EIKNLWNSCIKKKLRQKGIDPNTHK 638
EIKN W + ++K RQ D N+ +
Sbjct: 645 EIKNYWRTRVQKHARQLNCDVNSQQ 719
Score = 73.0 bits (153), Expect = 1e-011
Identities = 34/92 (36%), Positives = 52/92 (56%)
Frame = -2 / -3
Query: 638 LVGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECP 459
L+ V + LP +LL R P +LDL++ P ++ +L PPV VQL DE + +
Sbjct: 719 LLAVDVAVELPGVLLHPRAPVVLDLVVGAPREVLRDLGPPVAPPRVQLQDEQLLLRRDVA 540
Query: 458 SLEVWPQIVYPPQPTTLSAPLKPSEFGNRAPA 363
+V PQ+V PPQP L+ P +P + G++ A
Sbjct: 539 PPQVRPQVVEPPQPAALARPPEPWKEGSKHAA 444
Score = 63.8 bits (133), Expect = 9e-009
Identities = 35/82 (42%), Positives = 37/82 (45%)
Frame = -3 / -1
Query: 634 WVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANAPL 455
W+L S CL+ F FLISLSV PG C AI DH P C P
Sbjct: 715 WLLTSQLSCLACFCTRVRQ*FLISLSVRPGRCCAILDHRLPHRECSSRMSSCSCAVMLPR 536
Query: 454 LRSGLR*FIHLSLQLFPHL*SP 389
RSG R* H S QL P SP
Sbjct: 535 RRSGRR*LSHRSRQLLPVRRSP 470
Score = 45.1 bits (92), Expect(2) = 3e-036
Identities = 15/35 (42%), Positives = 24/35 (68%)
Frame = +3 / +3
Query: 291 LRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGL 395
L +G WS EED L+N++ HG G W+++ + AG+
Sbjct: 249 LHRGPWSVEEDMLLVNYVAAHGEGRWNALARCAGM 353
>gb|CW029941.1|CW029941 104_257_10499963_114_30401 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10499963, DNA
sequence
Length = 874
Score = 154 bits (331), Expect = 4e-036
Identities = 56/88 (63%), Positives = 70/88 (79%)
Frame = +3 / -3
Query: 258 MGRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINY 437
MGR CC K KG W+ EED++L+ +I HG GCW S+PK AGL RCGKSCRLRWINY
Sbjct: 377 MGRSPCCEKAHTNKGAWTKEEDDRLVAYIKAHGEGCWRSLPKAAGLLRCGKSCRLRWINY 198
Query: 438 LRPDLKRGAFAQDEEDLIIELHAVLGNR 521
LRPDLKRG F ++E++LII+LH++LGN+
Sbjct: 197 LRPDLKRGNFTEEEDELIIKLHSLLGNK 114
Score = 83.1 bits (175), Expect = 1e-014
Identities = 37/87 (42%), Positives = 54/87 (62%)
Frame = -2 / +3
Query: 518 VPEDSVQLDDEVFFVLGECPSLEVWPQIVYPPQPTTLSAPLKPSEFGNRAPAAMAMLCYV 339
V E++V+LDDE+ + E +LEV ++V PP+ L+A + G RAPA +A+ V
Sbjct: 117 VAEEAVELDDELVLLFREVAALEVGAEVVDPPEAAALAAAQEAGGLGQRAPATLAVRLDV 296
Query: 338 IHEFLILLRGPEPLSQLLLVAARMPPH 258
HE ++LL GP L + L+AAR PPH
Sbjct: 297 RHEAVVLLLGPRALVGVRLLAARRPPH 377
Score = 54.2 bits (112), Expect = 7e-006
Identities = 28/63 (44%), Positives = 32/63 (50%)
Frame = -3 / +1
Query: 529 *DHLFPRTACXXXXXXXXSWANAPLLRSGLR*FIHLSLQLFPHL*SPASLGTELQQPWPC 350
* +L PR S P LRSG R* IH QL P PA+LG+E QQP PC
Sbjct: 106 *SYLLPRRLWSLMMSSSSSSVKLPRLRSGRR*LIHRRRQLLPQRRRPAALGSERQQPSPC 285
Query: 349 FVM 341
+M
Sbjct: 286 ALM 294
Score = 37.7 bits (76), Expect = 0.62
Identities = 28/100 (28%), Positives = 31/100 (31%)
Frame = +1 / -1
Query: 259 WGGILAATSRS*ERGSGPLRRMRNS*IT*QSMAMAAGALFPNSLGFKGAERVVG*GG*TI 438
WGG AA R+ R GP RR S T + A AGA P A R GG T
Sbjct: 376 WGGRRAARRRTPTRARGPRRRTTASWRTSRRTARVAGARCPRPPASCAAARAAASGGSTT 197
Query: 439 *GQTSREGHSPXXXXXXXXXXXXXXXXXXXXXQRSCQGGL 558
TS S R + L
Sbjct: 196 SAPTSSAATSRKRRTSSSSSSTASSATSKTTTARGVRASL 77
>gb|CW029942.1|CW029942 104_257_10499964_114_30401 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10499964, DNA
sequence
Length = 812
Score = 154 bits (331), Expect = 4e-036
Identities = 56/88 (63%), Positives = 70/88 (79%)
Frame = +3 / -3
Query: 258 MGRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINY 437
MGR CC K KG W+ EED++L+ +I HG GCW S+PK AGL RCGKSCRLRWINY
Sbjct: 375 MGRSPCCEKAHTNKGAWTKEEDDRLVAYIKAHGEGCWRSLPKAAGLLRCGKSCRLRWINY 196
Query: 438 LRPDLKRGAFAQDEEDLIIELHAVLGNR 521
LRPDLKRG F ++E++LII+LH++LGN+
Sbjct: 195 LRPDLKRGNFTEEEDELIIKLHSLLGNK 112
Score = 83.1 bits (175), Expect = 1e-014
Identities = 37/87 (42%), Positives = 54/87 (62%)
Frame = -2 / +1
Query: 518 VPEDSVQLDDEVFFVLGECPSLEVWPQIVYPPQPTTLSAPLKPSEFGNRAPAAMAMLCYV 339
V E++V+LDDE+ + E +LEV ++V PP+ L+A + G RAPA +A+ V
Sbjct: 115 VAEEAVELDDELVLLFREVAALEVGAEVVDPPEAAALAAAQEAGGLGQRAPATLAVRLDV 294
Query: 338 IHEFLILLRGPEPLSQLLLVAARMPPH 258
HE ++LL GP L + L+AAR PPH
Sbjct: 295 RHEAVVLLLGPRALVGVRLLAARRPPH 375
Score = 54.2 bits (112), Expect = 7e-006
Identities = 28/63 (44%), Positives = 32/63 (50%)
Frame = -3 / +2
Query: 529 *DHLFPRTACXXXXXXXXSWANAPLLRSGLR*FIHLSLQLFPHL*SPASLGTELQQPWPC 350
* +L PR S P LRSG R* IH QL P PA+LG+E QQP PC
Sbjct: 104 *SYLLPRRLWSLMMSSSSSSVKLPRLRSGRR*LIHRRRQLLPQRRRPAALGSERQQPSPC 283
Query: 349 FVM 341
+M
Sbjct: 284 ALM 292
Score = 37.7 bits (76), Expect = 0.62
Identities = 28/100 (28%), Positives = 31/100 (31%)
Frame = +1 / -1
Query: 259 WGGILAATSRS*ERGSGPLRRMRNS*IT*QSMAMAAGALFPNSLGFKGAERVVG*GG*TI 438
WGG AA R+ R GP RR S T + A AGA P A R GG T
Sbjct: 374 WGGRRAARRRTPTRARGPRRRTTASWRTSRRTARVAGARCPRPPASCAAARAAASGGSTT 195
Query: 439 *GQTSREGHSPXXXXXXXXXXXXXXXXXXXXXQRSCQGGL 558
TS S R + L
Sbjct: 194 SAPTSSAATSRKRRTSSSSSSTASSATSKTTTARGVRASL 75
>gb|CW073845.1|CW073845 104_340_10781847_116_31470_327 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10781847, DNA
sequence
Length = 726
Score = 154 bits (331), Expect = 4e-036
Identities = 56/88 (63%), Positives = 70/88 (79%)
Frame = +3 / -2
Query: 258 MGRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINY 437
MGR CC K KG W+ EED++L+ +I HG GCW S+PK AGL RCGKSCRLRWINY
Sbjct: 362 MGRSPCCEKAHTNKGAWTKEEDDRLVAYIKAHGEGCWRSLPKAAGLLRCGKSCRLRWINY 183
Query: 438 LRPDLKRGAFAQDEEDLIIELHAVLGNR 521
LRPDLKRG F ++E++LII+LH++LGN+
Sbjct: 182 LRPDLKRGNFTEEEDELIIKLHSLLGNK 99
Score = 83.1 bits (175), Expect = 1e-014
Identities = 37/87 (42%), Positives = 54/87 (62%)
Frame = -2 / +3
Query: 518 VPEDSVQLDDEVFFVLGECPSLEVWPQIVYPPQPTTLSAPLKPSEFGNRAPAAMAMLCYV 339
V E++V+LDDE+ + E +LEV ++V PP+ L+A + G RAPA +A+ V
Sbjct: 102 VAEEAVELDDELVLLFREVAALEVGAEVVDPPEAAALAAAQEAGGLGQRAPATLAVRLDV 281
Query: 338 IHEFLILLRGPEPLSQLLLVAARMPPH 258
HE ++LL GP L + L+AAR PPH
Sbjct: 282 RHEAVVLLLGPRALVGVRLLAARRPPH 362
Score = 54.2 bits (112), Expect = 7e-006
Identities = 28/63 (44%), Positives = 32/63 (50%)
Frame = -3 / +1
Query: 529 *DHLFPRTACXXXXXXXXSWANAPLLRSGLR*FIHLSLQLFPHL*SPASLGTELQQPWPC 350
* +L PR S P LRSG R* IH QL P PA+LG+E QQP PC
Sbjct: 91 *SYLLPRRLWSLMMSSSSSSVKLPRLRSGRR*LIHRRRQLLPQRRRPAALGSERQQPSPC 270
Query: 349 FVM 341
+M
Sbjct: 271 ALM 279
Score = 37.7 bits (76), Expect = 0.62
Identities = 28/100 (28%), Positives = 31/100 (31%)
Frame = +1 / -3
Query: 259 WGGILAATSRS*ERGSGPLRRMRNS*IT*QSMAMAAGALFPNSLGFKGAERVVG*GG*TI 438
WGG AA R+ R GP RR S T + A AGA P A R GG T
Sbjct: 361 WGGRRAARRRTPTRARGPRRRTTASWRTSRRTARVAGARCPRPPASCAAARAAASGGSTT 182
Query: 439 *GQTSREGHSPXXXXXXXXXXXXXXXXXXXXXQRSCQGGL 558
TS S R + L
Sbjct: 181 SAPTSSAATSRKRRTSSSSSSTASSATSKTTTARGVRASL 62
>gb|CW331264.1|CW331264 104_828_11480814_116_36026_023 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11480814, DNA
sequence
Length = 686
Score = 154 bits (331), Expect = 4e-036
Identities = 58/97 (59%), Positives = 76/97 (78%)
Frame = +3 / +2
Query: 291 LRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRGAFA 470
LR+G W+ +ED L+N+I HG G W+S+ + AGL+R GKSCRLRW+NYLRPD++RG
Sbjct: 395 LRRGPWTADEDILLVNYIAVHGEGRWNSLARSAGLKRTGKSCRLRWLNYLRPDVRRGNIT 574
Query: 471 QDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLW 581
+E+ LI++LH+ GNRWS+IA LPGRTDNEIKN W
Sbjct: 575 AEEQLLILDLHSRWGNRWSKIAQHLPGRTDNEIKNYW 685
Score = 67.5 bits (141), Expect = 7e-010
Identities = 32/92 (34%), Positives = 51/92 (55%)
Frame = -2 / -2
Query: 581 P*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECPSLEVWPQIVYPPQPTTLSA 402
P +LDL++ Q+ +L PPV VQ+ D+ + G+ V P++V PP+P L+
Sbjct: 685 PVVLDLVVGAAGQVLRDLGPPVAPARVQVQDQQLLLGGDVAPPHVGPEVVEPPEPAALAR 506
Query: 401 PLKPSEFGNRAPAAMAMLCYVIHEFLILLRGP 306
L+ G R PAA+A+ V+ E +L+R P
Sbjct: 505 ALQAGGAGERVPAALAVDGDVVDEEDVLVRRP 410
Score = 62.5 bits (130), Expect = 2e-008
Identities = 34/78 (43%), Positives = 37/78 (47%)
Frame = -3 / -3
Query: 574 FLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANAPLLRSGLR*FIHLSLQLFPHL* 395
FLISLSV PG C AI DH P+ C S P SG R* H S QL P
Sbjct: 678 FLISLSVRPGRCCAILDHRLPQRECRSRISSCSSAVMLPRRTSGRR*LSHRSRQLLPVRF 499
Query: 394 SPASLGTELQQPWPCFVM 341
PA +E Q+P P M
Sbjct: 498 RPAERASEFQRPSPWTAM 445
>gb|CW458259.1|CW458259 fsbb001f204h09f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f204h09, DNA
sequence
Length = 591
Score = 154 bits (331), Expect = 4e-036
Identities = 56/88 (63%), Positives = 70/88 (79%)
Frame = +3 / -3
Query: 258 MGRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINY 437
MGR CC K KG W+ EED++L+ +I HG GCW S+PK AGL RCGKSCRLRWINY
Sbjct: 418 MGRSPCCEKAHTNKGAWTKEEDDRLVAYIKAHGEGCWRSLPKAAGLLRCGKSCRLRWINY 239
Query: 438 LRPDLKRGAFAQDEEDLIIELHAVLGNR 521
LRPDLKRG F ++E++LII+LH++LGN+
Sbjct: 238 LRPDLKRGNFTEEEDELIIKLHSLLGNK 155
Score = 83.1 bits (175), Expect = 1e-014
Identities = 37/87 (42%), Positives = 54/87 (62%)
Frame = -2 / +2
Query: 518 VPEDSVQLDDEVFFVLGECPSLEVWPQIVYPPQPTTLSAPLKPSEFGNRAPAAMAMLCYV 339
V E++V+LDDE+ + E +LEV ++V PP+ L+A + G RAPA +A+ V
Sbjct: 158 VAEEAVELDDELVLLFREVAALEVGAEVVDPPEAAALAAAQEAGGLGQRAPATLAVRLDV 337
Query: 338 IHEFLILLRGPEPLSQLLLVAARMPPH 258
HE ++LL GP L + L+AAR PPH
Sbjct: 338 RHEAVVLLLGPRALVGVRLLAARRPPH 418
Score = 54.2 bits (112), Expect = 7e-006
Identities = 28/63 (44%), Positives = 32/63 (50%)
Frame = -3 / +3
Query: 529 *DHLFPRTACXXXXXXXXSWANAPLLRSGLR*FIHLSLQLFPHL*SPASLGTELQQPWPC 350
* +L PR S P LRSG R* IH QL P PA+LG+E QQP PC
Sbjct: 147 *SYLLPRRLWSLMMSSSSSSVKLPRLRSGRR*LIHRRRQLLPQRRRPAALGSERQQPSPC 326
Query: 349 FVM 341
+M
Sbjct: 327 ALM 335
Score = 37.7 bits (76), Expect = 0.62
Identities = 28/100 (28%), Positives = 31/100 (31%)
Frame = +1 / -1
Query: 259 WGGILAATSRS*ERGSGPLRRMRNS*IT*QSMAMAAGALFPNSLGFKGAERVVG*GG*TI 438
WGG AA R+ R GP RR S T + A AGA P A R GG T
Sbjct: 417 WGGRRAARRRTPTRARGPRRRTTASWRTSRRTARVAGARCPRPPASCAAARAAASGGSTT 238
Query: 439 *GQTSREGHSPXXXXXXXXXXXXXXXXXXXXXQRSCQGGL 558
TS S R + L
Sbjct: 237 SAPTSSAATSRKRRTSSSSSSTASSATSKTTTARGVRASL 118
>gb|CW037176.1|CW037176 104_268_10504189_115_30382 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10504189, DNA
sequence
Length = 575
Score = 154 bits (330), Expect = 6e-036
Identities = 57/103 (55%), Positives = 77/103 (74%)
Frame = +3 / +2
Query: 291 LRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRGAFA 470
LR+G W+ +ED L ++ HG G W+ + + AGL+R GKSCRLRW+NYLRP ++RG F
Sbjct: 266 LRRGPWTVDEDALLAGYVAAHGEGRWNELARAAGLRRTGKSCRLRWLNYLRPGVRRGDFT 445
Query: 471 QDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKK 599
E+ LI++LHA GNRWS+IAA LPGRTDNE+KN W + ++K
Sbjct: 446 PREQLLILDLHARWGNRWSKIAAHLPGRTDNEVKNYWRTRVQK 574
Score = 51.5 bits (106), Expect = 5e-005
Identities = 28/104 (26%), Positives = 48/104 (46%)
Frame = -2 / -2
Query: 581 P*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECPSLEVWPQIVYPPQPTTLSA 402
P +LDL++ Q+R +L P V V+++DE GE P+ ++V P + L+
Sbjct: 556 PVVLDLVVGAARQVRGDLGPAVAPARVEVEDEQLLPRGEVPAAHPGAEVVEPAEAAALAR 377
Query: 401 PLKPSEFGNRAPAAMAMLCYVIHEFLILLRGPEPLSQLLLVAAR 270
+P P A+ +V + +L+ P P Q L + R
Sbjct: 376 APEPRGARQLVPPPFAVRRHVPRQQRVLVHRPRPPPQQLRLRRR 245
Score = 51.0 bits (105), Expect(2) = 3e-007
Identities = 28/75 (37%), Positives = 33/75 (44%)
Frame = -3 / -3
Query: 574 FLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANAPLLRSGLR*FIHLSLQLFPHL* 395
FL SLSV PG CAAI D P+ A +P G R* QL P
Sbjct: 549 FLTSLSVRPGRCAAILDQRLPQRAWRSRMSSCSRGVKSPRRTPGRR*LSQRRRQLLPVRR 370
Query: 394 SPASLGTELQQPWPC 350
SPA+ + +P PC
Sbjct: 369 SPAARASSFHRPSPC 325
Score = 25.8 bits (50), Expect(2) = 3e-007
Identities = 10/36 (27%), Positives = 18/36 (50%)
Frame = -1 / -3
Query: 324 HPPQGTRAPFSASACSSKNASPSQRNAEPGSSNQTH 217
H P A + AS+ SS +R++ ++ Q+H
Sbjct: 342 HRPSPCAATYPASSASSSTVHGPRRSSSASAAGQSH 235
>gb|CW047730.1|CW047730 104_285_10512861_115_30217 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10512861, DNA
sequence
Length = 571
Score = 154 bits (330), Expect = 6e-036
Identities = 57/89 (64%), Positives = 69/89 (77%)
Frame = +3 / +1
Query: 255 EMGRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWIN 434
+MGR CC K L++G W+PEED L+ HI +HGH W ++PK AGL RCGKSCRLRWIN
Sbjct: 253 DMGRAPCCEKMGLKRGPWTPEEDRVLVAHIERHGHSNWRALPKQAGLLRCGKSCRLRWIN 432
Query: 435 YLRPDLKRGAFAQDEEDLIIELHAVLGNR 521
YLRPD+KRG F +EED II+LH +LGNR
Sbjct: 433 YLRPDIKRGNFTAEEEDAIIQLHQMLGNR 519
Score = 71.6 bits (150), Expect = 4e-011
Identities = 35/92 (38%), Positives = 52/92 (56%)
Frame = -2 / -2
Query: 521 PVPEDSVQLDDEVFFVLGECPSLEVWPQIVYPPQPTTLSAPLKPSEFGNRAPAAMAMLCY 342
PV E V+LDD + + GE +L+V Q+V P + L+A + G RAP A+AM
Sbjct: 519 PVAEHLVELDDGILLLRGEVAALDVRAQVVDPSEAAALAAAEQARLLGQRAPVAVAMALD 340
Query: 341 VIHEFLILLRGPEPLSQLLLVAARMPPHLNAM 246
V H+ + L P P Q L+AAR PH++++
Sbjct: 339 VRHQDPVFLGRPRPPLQPHLLAARSAPHVSSL 244
>gb|CW057979.1|CW057979 104_300_10518502_1_30028 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10518502, DNA
sequence
Length = 410
Score = 154 bits (330), Expect = 6e-036
Identities = 57/89 (64%), Positives = 69/89 (77%)
Frame = +3 / +3
Query: 255 EMGRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWIN 434
+MGR CC K L++G W+PEED L+ HI +HGH W ++PK AGL RCGKSCRLRWIN
Sbjct: 72 DMGRAPCCEKMGLKRGPWTPEEDRVLVAHIERHGHSNWRALPKQAGLLRCGKSCRLRWIN 251
Query: 435 YLRPDLKRGAFAQDEEDLIIELHAVLGNR 521
YLRPD+KRG F +EED II+LH +LGNR
Sbjct: 252 YLRPDIKRGNFTAEEEDAIIQLHQMLGNR 338
Score = 71.6 bits (150), Expect = 4e-011
Identities = 35/92 (38%), Positives = 52/92 (56%)
Frame = -2 / -1
Query: 521 PVPEDSVQLDDEVFFVLGECPSLEVWPQIVYPPQPTTLSAPLKPSEFGNRAPAAMAMLCY 342
PV E V+LDD + + GE +L+V Q+V P + L+A + G RAP A+AM
Sbjct: 338 PVAEHLVELDDGILLLRGEVAALDVRAQVVDPSEAAALAAAEQARLLGQRAPVAVAMALD 159
Query: 341 VIHEFLILLRGPEPLSQLLLVAARMPPHLNAM 246
V H+ + L P P Q L+AAR PH++++
Sbjct: 158 VRHQDPVFLGRPRPPLQPHLLAARSAPHVSSL 63
>gb|CW415564.1|CW415564 fsbb001f115l16f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f115l16, DNA
sequence
Length = 531
Score = 99.6 bits (211), Expect(2) = 8e-036
Identities = 36/45 (80%), Positives = 42/45 (93%)
Frame = +3 / -3
Query: 513 GNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPNTHKPLT 647
G RWSQIA+ LPGRTDNEIKN WNSC+KKKLRQ+GIDP+THKP++
Sbjct: 301 GCRWSQIASHLPGRTDNEIKNFWNSCLKKKLRQRGIDPSTHKPIS 167
Score = 73.9 bits (155), Expect(2) = 8e-036
Identities = 28/43 (65%), Positives = 35/43 (81%)
Frame = +3 / -1
Query: 408 KSCRLRWINYLRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIA 536
++ RLRWINYLRPD KRG+F+Q EED I+ LH +LGNR+ Q A
Sbjct: 519 RAARLRWINYLRPDGKRGSFSQQEEDAIVGLHEILGNRYIQYA 391
Score = 69.3 bits (145), Expect(2) = 5e-017
Identities = 30/44 (68%), Positives = 32/44 (72%)
Frame = -3 / +3
Query: 640 GLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPR 509
GLWVLGSMP SFFL F +FLISLSV PG C AI DHL P+
Sbjct: 174 GLWVLGSMPRWRSFFLRQLFQKFLISLSVRPGKCDAICDHLHPQ 305
Score = 56.5 bits (117), Expect(2) = 1e-006
Identities = 24/49 (48%), Positives = 33/49 (67%)
Frame = -2 / +2
Query: 638 LVGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLD 492
LVG G++A L QLLL+A VP +LDL++ P Q+R +LRPP +D
Sbjct: 176 LVGAGVDAALAQLLLEAAVPEVLDLVVRPARQVRRDLRPPASAKKKYID 322
Score = 40.9 bits (83), Expect(2) = 5e-017
Identities = 18/39 (46%), Positives = 23/39 (58%)
Frame = -2 / +1
Query: 536 CNLRPPVPEDSVQLDDEVFFVLGECPSLEVWPQIVYPPQ 420
C L PVP+D V+ DD V +L E L V Q+V PP+
Sbjct: 391 CVLYVPVPQDLVEADDGVLLLLREAAPLPVGAQVVDPPK 507
Score = 39.6 bits (80), Expect = 0.17
Identities = 18/35 (51%), Positives = 21/35 (60%)
Frame = +1 / -1
Query: 535 QRSCQGGLIMRSRIYGTRASRRS*GRKALIPTPTS 639
+R+C+ G RSR GT ASRRS A P PTS
Sbjct: 279 RRTCRAGRTTRSRTSGTAASRRSCASAASTPAPTS 175
Score = 39.1 bits (79), Expect = 0.24
Identities = 21/41 (51%), Positives = 25/41 (60%)
Frame = +2 / -2
Query: 518 QVVSNCSAAARED***DQESMELVHQEEAEAERH*SQHPQA 640
QVV++ A A D DQE +E + QEEA RH QHPQA
Sbjct: 296 QVVADRVALAGPDGQRDQELLEQLPQEEAAPARHRPQHPQA 174
Score = 21.7 bits (41), Expect(2) = 1e-006
Identities = 6/8 (75%), Positives = 7/8 (87%)
Frame = -3 / +1
Query: 1135 LPMPVPPC 1112
+PMP PPC
Sbjct: 139 VPMPPPPC 162
>gb|CW186390.1|CW186390 104_604_11166541_148_36706_057 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11166541, DNA
sequence
Length = 644
Score = 153 bits (328), Expect = 1e-035
Identities = 55/88 (62%), Positives = 69/88 (78%)
Frame = +3 / -3
Query: 258 MGRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINY 437
MGR CC K KG W+ EED++L+ +I HG GCW S+PK AGL RCGKSCRLRW+NY
Sbjct: 300 MGRSPCCEKAHTNKGAWTKEEDQRLIAYIKAHGEGCWRSLPKAAGLLRCGKSCRLRWMNY 121
Query: 438 LRPDLKRGAFAQDEEDLIIELHAVLGNR 521
LRPDLKRG F D++++II+LHA+LGN+
Sbjct: 120 LRPDLKRGNFTDDDDEIIIKLHALLGNK 37
Score = 84.5 bits (178), Expect = 5e-015
Identities = 38/87 (43%), Positives = 55/87 (63%)
Frame = -2 / +1
Query: 518 VPEDSVQLDDEVFFVLGECPSLEVWPQIVYPPQPTTLSAPLKPSEFGNRAPAAMAMLCYV 339
V E V+LDD++ V+GE +LEV ++V+P QP L+A + G RAPA +A+ V
Sbjct: 40 VAEQGVELDDDLVVVVGEVAALEVRAEVVHPAQPAALAAAEEARGLGQRAPATLAVRLDV 219
Query: 338 IHEFLILLRGPEPLSQLLLVAARMPPH 258
+ L+LL GP L ++ L+AAR PPH
Sbjct: 220 GDQALVLLLGPRALVRVRLLAARRPPH 300
Score = 57.0 bits (118), Expect = 1e-006
Identities = 29/61 (47%), Positives = 33/61 (54%)
Frame = -3 / +2
Query: 523 HLFPRTACXXXXXXXXSWANAPLLRSGLR*FIHLSLQLFPHL*SPASLGTELQQPWPCFV 344
+L P A S P LRSG R*FI SLQL P PA+LG+E QQP PC +
Sbjct: 35 YLLPSRAWSLMMISSSSSVKLPRLRSGRR*FIQRSLQLLPQRRRPAALGSERQQPSPCAL 214
Query: 343 M 341
M
Sbjct: 215 M 217
Score = 43.7 bits (89), Expect = 0.010
Identities = 27/71 (38%), Positives = 31/71 (43%)
Frame = +1 / -1
Query: 259 WGGILAATSRS*ERGSGPLRRMRNS*IT*QSMAMAAGALFPNSLGFKGAERVVG*GG*TI 438
WGG+ AA R+ R GP RR T + A AGA P A R G G*T
Sbjct: 299 WGGLRAARRRTRTRARGPRRRTSA*SPTSRRTARVAGARCPRPRASSAAARAAGCAG*TT 120
Query: 439 *GQTSREGHSP 471
+TS SP
Sbjct: 119 SARTSSAATSP 87
>gb|CW395581.1|CW395581 fsbb001f083k18f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f083k18, DNA
sequence
Length = 647
Score = 153 bits (328), Expect = 1e-035
Identities = 55/88 (62%), Positives = 69/88 (78%)
Frame = +3 / -2
Query: 258 MGRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINY 437
MGR CC K KG W+ EED++L+ +I HG GCW S+PK AGL RCGKSCRLRW+NY
Sbjct: 403 MGRSPCCEKAHTNKGAWTKEEDQRLIAYIKAHGEGCWRSLPKAAGLLRCGKSCRLRWMNY 224
Query: 438 LRPDLKRGAFAQDEEDLIIELHAVLGNR 521
LRPDLKRG F D++++II+LHA+LGN+
Sbjct: 223 LRPDLKRGNFTDDDDEIIIKLHALLGNK 140
Score = 84.5 bits (178), Expect = 5e-015
Identities = 38/87 (43%), Positives = 55/87 (63%)
Frame = -2 / +2
Query: 518 VPEDSVQLDDEVFFVLGECPSLEVWPQIVYPPQPTTLSAPLKPSEFGNRAPAAMAMLCYV 339
V E V+LDD++ V+GE +LEV ++V+P QP L+A + G RAPA +A+ V
Sbjct: 143 VAEQGVELDDDLVVVVGEVAALEVRAEVVHPAQPAALAAAEEARGLGQRAPATLAVRLDV 322
Query: 338 IHEFLILLRGPEPLSQLLLVAARMPPH 258
+ L+LL GP L ++ L+AAR PPH
Sbjct: 323 GDQALVLLLGPRALVRVRLLAARRPPH 403
Score = 57.0 bits (118), Expect = 1e-006
Identities = 29/61 (47%), Positives = 33/61 (54%)
Frame = -3 / +3
Query: 523 HLFPRTACXXXXXXXXSWANAPLLRSGLR*FIHLSLQLFPHL*SPASLGTELQQPWPCFV 344
+L P A S P LRSG R*FI SLQL P PA+LG+E QQP PC +
Sbjct: 138 YLLPSRAWSLMMISSSSSVKLPRLRSGRR*FIQRSLQLLPQRRRPAALGSERQQPSPCAL 317
Query: 343 M 341
M
Sbjct: 318 M 320
Score = 43.7 bits (89), Expect = 0.010
Identities = 27/71 (38%), Positives = 31/71 (43%)
Frame = +1 / -3
Query: 259 WGGILAATSRS*ERGSGPLRRMRNS*IT*QSMAMAAGALFPNSLGFKGAERVVG*GG*TI 438
WGG+ AA R+ R GP RR T + A AGA P A R G G*T
Sbjct: 402 WGGLRAARRRTRTRARGPRRRTSA*SPTSRRTARVAGARCPRPRASSAAARAAGCAG*TT 223
Query: 439 *GQTSREGHSP 471
+TS SP
Sbjct: 222 SARTSSAATSP 190
>gb|CW161765.1|CW161765 104_568_11150585_148_36434_067 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11150585, DNA
sequence
Length = 716
Score = 152 bits (327), Expect = 1e-035
Identities = 59/86 (68%), Positives = 71/86 (82%)
Frame = +3 / +1
Query: 288 KLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRGAF 467
KLRKGLWSPEEDE+L+ ++ + G G WS V + AGLQRCGKSCRLRWINYLRPDLKRGAF
Sbjct: 277 KLRKGLWSPEEDERLVAYMLRSGQGSWSDVARNAGLQRCGKSCRLRWINYLRPDLKRGAF 456
Query: 468 AQDEEDLIIELHAVLGNRWSQIAAQL 545
+ EE+LI+ LHA+LGNR+ AA +
Sbjct: 457 SPQEEELIVSLHAILGNRYLTRAAHV 534
Score = 78.5 bits (165), Expect = 3e-013
Identities = 34/78 (43%), Positives = 51/78 (65%)
Frame = -2 / -3
Query: 521 PVPEDSVQLDDEVFFVLGECPSLEVWPQIVYPPQPTTLSAPLKPSEFGNRAPAAMAMLCY 342
PV +D V+ DDE+ + E +LEV P++V PP+ L+APL+P G+ AP + +
Sbjct: 510 PVSQDGVEADDELLLLRREGAALEVRPEVVDPPEAAALAAPLQPGVPGDVAPRTLPTPQH 331
Query: 341 VIHEFLILLRGPEPLSQL 288
V H+ L+LLR P+PL+QL
Sbjct: 330 VRHQPLVLLRRPQPLAQL 277
Score = 57.4 bits (119), Expect = 7e-007
Identities = 30/69 (43%), Positives = 35/69 (50%)
Frame = -3 / -1
Query: 559 SVLPGSCAAI*DHLFPRTACXXXXXXXXSWANAPLLRSGLR*FIHLSLQLFPHL*SPASL 380
+V+ +CAA +LFPR A AP LRSG R* IH QL PH SPA
Sbjct: 548 AVIITTCAARVRYLFPRMAWRLTMSSSSCGEKAPRLRSGRR*LIHRRRQLLPHRCSPAFR 369
Query: 379 GTELQQPWP 353
T L +P P
Sbjct: 368 ATSLHEPCP 342
>gb|AF470063.1| Sorghum bicolor P-type R2R3 Myb protein (Myb5) gene, partial cds
Length = 1117
Score = 152 bits (327), Expect = 1e-035
Identities = 59/86 (68%), Positives = 71/86 (82%)
Frame = +3 / +1
Query: 288 KLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRGAF 467
KLRKGLWSPEEDE+L+ ++ + G G WS V + AGLQRCGKSCRLRWINYLRPDLKRGAF
Sbjct: 442 KLRKGLWSPEEDERLVAYMLRSGQGSWSDVARNAGLQRCGKSCRLRWINYLRPDLKRGAF 621
Query: 468 AQDEEDLIIELHAVLGNRWSQIAAQL 545
+ EE+LI+ LHA+LGNR+ AA +
Sbjct: 622 SPQEEELIVSLHAILGNRYLTRAAHV 699
Score = 78.5 bits (165), Expect = 3e-013
Identities = 34/78 (43%), Positives = 51/78 (65%)
Frame = -2 / -2
Query: 521 PVPEDSVQLDDEVFFVLGECPSLEVWPQIVYPPQPTTLSAPLKPSEFGNRAPAAMAMLCY 342
PV +D V+ DDE+ + E +LEV P++V PP+ L+APL+P G+ AP + +
Sbjct: 675 PVSQDGVEADDELLLLRREGAALEVRPEVVDPPEAAALAAPLQPGVPGDVAPRTLPTPQH 496
Query: 341 VIHEFLILLRGPEPLSQL 288
V H+ L+LLR P+PL+QL
Sbjct: 495 VRHQPLVLLRRPQPLAQL 442
Score = 57.4 bits (119), Expect = 7e-007
Identities = 30/69 (43%), Positives = 35/69 (50%)
Frame = -3 / -3
Query: 559 SVLPGSCAAI*DHLFPRTACXXXXXXXXSWANAPLLRSGLR*FIHLSLQLFPHL*SPASL 380
+V+ +CAA +LFPR A AP LRSG R* IH QL PH SPA
Sbjct: 713 AVIITTCAARVRYLFPRMAWRLTMSSSSCGEKAPRLRSGRR*LIHRRRQLLPHRCSPAFR 534
Query: 379 GTELQQPWP 353
T L +P P
Sbjct: 533 ATSLHEPCP 507
>gb|CW044723.1|CW044723 104_280_10509121_114_30262 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10509121, DNA
sequence
Length = 643
Score = 75.8 bits (159), Expect(3) = 2e-035
Identities = 28/46 (60%), Positives = 37/46 (80%)
Frame = +3 / +1
Query: 384 LAGLQRCGKSCRLRWINYLRPDLKRGAFAQDEEDLIIELHAVLGNR 521
++GL+R GKSCRLRW+NYL+PDL R ++ EEDLI+ L +LGNR
Sbjct: 331 ISGLKRSGKSCRLRWMNYLQPDLSREPISKQEEDLIVSLQKLLGNR 468
Score = 64.8 bits (135), Expect(3) = 2e-035
Identities = 24/37 (64%), Positives = 31/37 (83%)
Frame = +3 / +3
Query: 282 KQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAG 392
K+ +RKGLWSP+EDE+L +HIT +G G WSSV +LAG
Sbjct: 84 KKLMRKGLWSPDEDERLYSHITHYGVGTWSSVAELAG 194
Score = 55.6 bits (115), Expect(3) = 2e-035
Identities = 21/26 (80%), Positives = 23/26 (88%)
Frame = +3 / +2
Query: 519 RWSQIAAQLPGRTDNEIKNLWNSCIK 596
RWS IAA++PGRTDNEIKN WNS IK
Sbjct: 566 RWSAIAARMPGRTDNEIKNYWNSRIK 643
Score = 52.8 bits (109), Expect(3) = 2e-015
Identities = 25/46 (54%), Positives = 28/46 (60%)
Frame = -3 / -3
Query: 526 DHLFPRTACXXXXXXXXSWANAPLLRSGLR*FIHLSLQLFPHL*SP 389
++LFPR+ C LLRSG R*FIHLSLQLFP L SP
Sbjct: 473 NYLFPRSFCKDTMRSSSCLEMGSLLRSGCR*FIHLSLQLFPLLFSP 336
Score = 48.3 bits (99), Expect(2) = 2e-009
Identities = 22/44 (50%), Positives = 28/44 (63%)
Frame = -2 / -2
Query: 521 PVPEDSVQLDDEVFFVLGECPSLEVWPQIVYPPQPTTLSAPLKP 390
PV + +Q DEV F+LG+ EVW QIV+P Q L APL+P
Sbjct: 468 PVS*EFLQGYDEVLFLLGDGLPAEVWLQIVHPSQSAALPAPLQP 337
Score = 44.1 bits (90), Expect(3) = 2e-015
Identities = 20/29 (68%), Positives = 22/29 (75%)
Frame = -3 / -2
Query: 595 LMHEFHRFLISLSVLPGSCAAI*DHLFPR 509
LM EF FLISLSVLPG AAI DHL+ +
Sbjct: 642 LMREFQ*FLISLSVLPGILAAIADHLYKK 556
Score = 36.3 bits (73), Expect(2) = 2e-009
Identities = 16/27 (59%), Positives = 18/27 (66%)
Frame = -2 / -1
Query: 596 LDARVP*ILDLIISPPWQLRCNLRPPV 516
LDA VP +LDLII P CN RPP+
Sbjct: 643 LDA*VPVVLDLIICPSRHPCCNRRPPI 563
Score = 31.3 bits (62), Expect(2) = 1.3
Identities = 15/25 (60%), Positives = 18/25 (72%)
Frame = +2 / +1
Query: 521 VVSNCSAAARED***DQESMELVHQ 595
VV +CS A +D **DQE +EL HQ
Sbjct: 568 VVCDCSKDAWKDR**DQELLELTHQ 642
Score = 31.3 bits (62), Expect(3) = 2e-015
Identities = 15/35 (42%), Positives = 22/35 (62%)
Frame = -2 / -3
Query: 383 FGNRAPAAMAMLCYVIHEFLILLRGPEPLSQLLLV 279
FG+ P + A++C V + L+L+R P PL LLV
Sbjct: 185 FGDGGPGSNAVVCDVAIKPLVLVR*P*PLPHQLLV 81
Score = 26.3 bits (51), Expect(2) = 1.3
Identities = 15/30 (50%), Positives = 17/30 (56%)
Frame = +1 / +2
Query: 382 NSLGFKGAERVVG*GG*TI*GQTSREGHSP 471
+S G +GA R * G*TI QTS SP
Sbjct: 329 SSQG*RGAGRAAD*DG*TICSQTSAGSPSP 418
>gb|CW440966.1|CW440966 fsbb001f159n24k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f159n24, DNA
sequence
Length = 536
Score = 88.6 bits (187), Expect(2) = 3e-035
Identities = 34/47 (72%), Positives = 39/47 (82%)
Frame = +3 / +2
Query: 387 AGLQRCGKSCRLRWINYLRPDLKRGAFAQDEEDLIIELHAVLGNRWS 527
AGL RCGKSCRLRW NYLRPDLKRG + EE L+I+LHA LGNR++
Sbjct: 23 AGLLRCGKSCRLRWTNYLRPDLKRGLLSDAEEKLVIDLHAQLGNRYT 163
Score = 83.1 bits (175), Expect(2) = 3e-035
Identities = 32/42 (76%), Positives = 37/42 (88%)
Frame = +3 / +1
Query: 519 RWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPNTHKPL 644
RWS+IA+ LPGRTDNEIKN WN+ IKKKL++ GIDP THKPL
Sbjct: 268 RWSKIASHLPGRTDNEIKNHWNTHIKKKLKKMGIDPLTHKPL 393
Score = 65.7 bits (137), Expect(2) = 3e-020
Identities = 29/41 (70%), Positives = 30/41 (73%)
Frame = -3 / -1
Query: 640 GLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHL 518
GLWV GS+P LSFFLM F FLISLSV PG C AI DHL
Sbjct: 389 GLWVSGSIPIFLSFFLMWVFQWFLISLSVRPGKCDAILDHL 267
Score = 55.6 bits (115), Expect(2) = 3e-020
Identities = 24/46 (52%), Positives = 31/46 (67%)
Frame = -2 / -2
Query: 527 RPPVPEDSVQLDDEVFFVLGECPSLEVWPQIVYPPQPTTLSAPLKP 390
R PV E S+Q+DDE+ +GE LEV PQ+V PP+P L AP +P
Sbjct: 163 RIPVAELSMQVDDELLLGVGEQAPLEVRPQVVGPPEPAALPAPQQP 26
Score = 51.9 bits (107), Expect(2) = 1e-014
Identities = 21/40 (52%), Positives = 28/40 (70%)
Frame = -2 / -3
Query: 638 LVGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPP 519
LVG ++ L +LLLD VP +LDL++ PWQ+R NL PP
Sbjct: 387 LVGERVDPHLLELLLDVGVPVVLDLVVRSPWQVRRNLGPP 268
Score = 50.6 bits (104), Expect(2) = 1e-014
Identities = 23/46 (50%), Positives = 27/46 (58%)
Frame = -3 / -3
Query: 523 HLFPRTACXXXXXXXXSWANAPLLRSGLR*FIHLSLQLFPHL*SPA 386
+L P AC + + PLLRSG R* +H S QLFPHL SPA
Sbjct: 159 YLLPS*ACRSMTSFSSASESRPLLRSGRR*LVHRSRQLFPHLSSPA 22
Score = 38.6 bits (78), Expect = 0.33
Identities = 19/40 (47%), Positives = 24/40 (60%)
Frame = +2 / +3
Query: 521 VVSNCSAAARED***DQESMELVHQEEAEAERH*SQHPQA 640
VV +C A AR + DQE +E HQEEA+ + HPQA
Sbjct: 270 VVQDCVALARANGQRDQEPLEHPHQEEAQEDGDRPAHPQA 389
>gb|CW034132.1|CW034132 104_264_10502369_115_30380 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10502369, DNA
sequence
Length = 524
Score = 88.6 bits (187), Expect(2) = 3e-035
Identities = 34/47 (72%), Positives = 39/47 (82%)
Frame = +3 / +2
Query: 387 AGLQRCGKSCRLRWINYLRPDLKRGAFAQDEEDLIIELHAVLGNRWS 527
AGL RCGKSCRLRW NYLRPDLKRG + EE L+I+LHA LGNR++
Sbjct: 128 AGLLRCGKSCRLRWTNYLRPDLKRGLLSDAEEKLVIDLHAQLGNRYT 268
Score = 83.1 bits (175), Expect(2) = 3e-035
Identities = 32/42 (76%), Positives = 37/42 (88%)
Frame = +3 / +1
Query: 519 RWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPNTHKPL 644
RWS+IA+ LPGRTDNEIKN WN+ IKKKL++ GIDP THKPL
Sbjct: 373 RWSKIASHLPGRTDNEIKNHWNTHIKKKLKKMGIDPLTHKPL 498
Score = 65.7 bits (137), Expect(2) = 3e-020
Identities = 29/41 (70%), Positives = 30/41 (73%)
Frame = -3 / -1
Query: 640 GLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHL 518
GLWV GS+P LSFFLM F FLISLSV PG C AI DHL
Sbjct: 494 GLWVSGSIPIFLSFFLMWVFQWFLISLSVRPGKCDAILDHL 372
Score = 55.6 bits (115), Expect(2) = 3e-020
Identities = 24/46 (52%), Positives = 31/46 (67%)
Frame = -2 / -2
Query: 527 RPPVPEDSVQLDDEVFFVLGECPSLEVWPQIVYPPQPTTLSAPLKP 390
R PV E S+Q+DDE+ +GE LEV PQ+V PP+P L AP +P
Sbjct: 268 RIPVAELSMQVDDELLLGVGEQAPLEVRPQVVGPPEPAALPAPQQP 131
Score = 51.9 bits (107), Expect(2) = 1e-014
Identities = 21/40 (52%), Positives = 28/40 (70%)
Frame = -2 / -3
Query: 638 LVGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPP 519
LVG ++ L +LLLD VP +LDL++ PWQ+R NL PP
Sbjct: 492 LVGERVDPHLLELLLDVGVPVVLDLVVRSPWQVRRNLGPP 373
Score = 50.6 bits (104), Expect(2) = 1e-014
Identities = 23/46 (50%), Positives = 27/46 (58%)
Frame = -3 / -3
Query: 523 HLFPRTACXXXXXXXXSWANAPLLRSGLR*FIHLSLQLFPHL*SPA 386
+L P AC + + PLLRSG R* +H S QLFPHL SPA
Sbjct: 264 YLLPS*ACRSMTSFSSASESRPLLRSGRR*LVHRSRQLFPHLSSPA 127
Score = 38.6 bits (78), Expect = 0.33
Identities = 19/40 (47%), Positives = 24/40 (60%)
Frame = +2 / +3
Query: 521 VVSNCSAAARED***DQESMELVHQEEAEAERH*SQHPQA 640
VV +C A AR + DQE +E HQEEA+ + HPQA
Sbjct: 375 VVQDCVALARANGQRDQEPLEHPHQEEAQEDGDRPAHPQA 494
>gb|CX617094.1|CX617094 GABR1_31_D12.g1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_31_D12_A002 5', mRNA sequence
Length = 750
Score = 151 bits (324), Expect = 4e-035
Identities = 64/145 (44%), Positives = 87/145 (60%)
Frame = +3 / +1
Query: 291 LRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRGAFA 470
+RKG W+ EEDE+L+ + G W + K++GL+R GKSCRLRW+NYL P L+RG
Sbjct: 235 MRKGPWTDEEDEQLVRFVRLFGERRWDFLAKVSGLRRTGKSCRLRWVNYLHPGLRRGRIT 414
Query: 471 QDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPNTHKPLTE 650
DEE I+ELHA G+RWS+IA LPGRTDNEIKN W + +KK ++ +T
Sbjct: 415 ADEERRIVELHAQWGSRWSRIARSLPGRTDNEIKNFWRTRTRKKALEERRAAGAAAAVTA 594
Query: 651 ADHGGAAPTISTERTSGSSDINPSS 725
A+ + S S +P+S
Sbjct: 595 TAEPAASSSSSVTMISECRPGSPNS 669
Score = 54.7 bits (113), Expect = 5e-006
Identities = 29/67 (43%), Positives = 33/67 (49%)
Frame = -3 / -2
Query: 604 SFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANAPLLRSGLR*FIH 425
+FFL+ +FLISLSV PG A+ DHL P A S P R G R*F H
Sbjct: 548 AFFLVLVLQKFLISLSVRPGKLLAMRDHLLPHCAWSSTMRRSSSAVMRPRRRPGWR*FTH 369
Query: 424 LSLQLFP 404
QL P
Sbjct: 368 RRRQLLP 348
Score = 41.8 bits (85), Expect = 0.036
Identities = 22/69 (31%), Positives = 33/69 (47%)
Frame = -2 / -1
Query: 611 LPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECPSLEVWPQIV 432
L LL P +LDL++ Q + RPP V+L D V G+ S E ++V
Sbjct: 555 LESLLPGPCPPEVLDLVVGASGQAPGDARPPASPLRVELHDASLLVGGDAASPEARVEVV 376
Query: 431 YPPQPTTLS 405
+PP+ L+
Sbjct: 375 HPPEAAALA 349
>gb|CW215123.1|CW215123 104_647_11194377_116_37161_041 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11194377, DNA
sequence
Length = 493
Score = 150 bits (323), Expect = 5e-035
Identities = 55/88 (62%), Positives = 69/88 (78%)
Frame = +3 / -2
Query: 258 MGRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINY 437
M R CC K KG W+ EED++L+ +I HG GCW S+PK AGL RCGKSCRLRWINY
Sbjct: 354 MRRSPCCEKAHTNKGAWTKEEDDRLVAYIKAHGEGCWRSLPKAAGLLRCGKSCRLRWINY 175
Query: 438 LRPDLKRGAFAQDEEDLIIELHAVLGNR 521
LRPDLKRG F ++E++LII+LH++LGN+
Sbjct: 174 LRPDLKRGNFTEEEDELIIKLHSLLGNK 91
Score = 81.7 bits (172), Expect = 4e-014
Identities = 37/87 (42%), Positives = 54/87 (62%)
Frame = -2 / +1
Query: 518 VPEDSVQLDDEVFFVLGECPSLEVWPQIVYPPQPTTLSAPLKPSEFGNRAPAAMAMLCYV 339
V E++V+LDDE+ + E +LEV ++V PP+ L+A + G RAPA +A+ V
Sbjct: 94 VAEEAVELDDELVLLFREVAALEVGAEVVDPPEAAALAAAQEAGGLGQRAPATLAVRLDV 273
Query: 338 IHEFLILLRGPEPLSQLLLVAARMPPH 258
HE ++LL GP L + L+AAR PPH
Sbjct: 274 RHEAVVLLLGPRALVGVRLLAAR*PPH 354
Score = 54.2 bits (112), Expect = 7e-006
Identities = 28/63 (44%), Positives = 32/63 (50%)
Frame = -3 / +2
Query: 529 *DHLFPRTACXXXXXXXXSWANAPLLRSGLR*FIHLSLQLFPHL*SPASLGTELQQPWPC 350
* +L PR S P LRSG R* IH QL P PA+LG+E QQP PC
Sbjct: 83 *SYLLPRRLWSLMMSSSSSSVKLPRLRSGRR*LIHRRRQLLPQRKRPAALGSERQQPSPC 262
Query: 349 FVM 341
+M
Sbjct: 263 ALM 271
>gb|CX615050.1|CX615050 GABR1_17_G10.g1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_17_G10_A002 5', mRNA sequence
Length = 791
Score = 150 bits (323), Expect = 5e-035
Identities = 58/111 (52%), Positives = 80/111 (72%)
Frame = +3 / +3
Query: 282 KQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRG 461
+++ RKG W+ +ED +L+ + G W + K++GL R GKSCRLRW+NYL P LKRG
Sbjct: 210 REETRKGPWTEQEDLQLVCTVRLFGERRWDFIAKVSGLNRTGKSCRLRWVNYLHPGLKRG 389
Query: 462 AFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQK 614
+ EE LI+ELHA GNRWS+IA +LPGRTDNEIKN W + ++KK +++
Sbjct: 390 RMSPHEERLILELHARWGNRWSRIARRLPGRTDNEIKNYWRTHMRKKAQER 542
Score = 75.3 bits (158), Expect = 3e-012
Identities = 37/99 (37%), Positives = 51/99 (51%)
Frame = -2 / -1
Query: 581 P*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECPSLEVWPQIVYPPQPTTLSA 402
P +LDLI+S PWQ PPV SVQL DE F+ P+LE ++V P +P L+
Sbjct: 509 PVVLDLIVSAPWQAARYPGPPVSPPSVQLKDEALFMGRHAPTLEARVKVVDPAKPAALAC 330
Query: 401 PLKPSEFGNRAPAAMAMLCYVIHEFLILLRGPEPLSQLL 285
++ FGN P ++ +LL P PL+ LL
Sbjct: 329 SVES*YFGNEIPTTFTEETDSAYQLQVLLLCPWPLASLL 213
Score = 62.9 bits (131), Expect = 2e-008
Identities = 37/84 (44%), Positives = 41/84 (48%)
Frame = -3 / -2
Query: 604 SFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANAPLLRSGLR*FIH 425
+FFLM FLISLSV PG AI DHLFP AC P LR G R*
Sbjct: 532 AFFLMCVLQ*FLISLSVRPGKRRAILDHLFPHRACSSRMRRSSWGDMRPRLRPG*R*LTQ 353
Query: 424 LSLQLFPHL*SPASLGTELQQPWP 353
S QL P SP +L + Q+ P
Sbjct: 352 RSRQLLPVRLSPDTLAMKSQRRSP 281
>gb|CW042795.1|CW042795 104_276_10507284_116_30487 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10507284, DNA
sequence
Length = 568
Score = 150 bits (322), Expect = 7e-035
Identities = 56/87 (64%), Positives = 66/87 (75%)
Frame = +3 / -1
Query: 252 VEMGRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWI 431
V MGR CC K KG W+ EEDE+L+ +I HG GCW S+PK AGL RCGKSCRLRW+
Sbjct: 262 VAMGRSPCCEKAHTNKGAWTKEEDERLVAYIRAHGEGCWRSLPKAAGLPRCGKSCRLRWM 83
Query: 432 NYLRPDLKRGAFAQDEEDLIIELHAVL 512
NYLRPDLKRG F DE++LII LH++L
Sbjct: 82 NYLRPDLKRGNFTDDEDELIIRLHSLL 2
Score = 89.5 bits (189), Expect = 2e-016
Identities = 39/85 (45%), Positives = 55/85 (64%)
Frame = -2 / +2
Query: 512 EDSVQLDDEVFFVLGECPSLEVWPQIVYPPQPTTLSAPLKPSEFGNRAPAAMAMLCYVIH 333
E++VQ DDE+ V+GE +LEV ++V+PPQP L+A + G RAPA + V H
Sbjct: 2 EEAVQADDELVLVVGEVAALEVRAEVVHPPQPAALAAARQARRLGQRAPAPFPVRPDVRH 181
Query: 332 EFLILLRGPEPLSQLLLVAARMPPH 258
+ L+LL GP L ++ L+AAR PPH
Sbjct: 182 QPLVLLLGPRALVRVRLLAARRPPH 256
Score = 56.1 bits (116), Expect = 2e-006
Identities = 27/54 (50%), Positives = 29/54 (53%)
Frame = -3 / +3
Query: 511 RTACXXXXXXXXSWANAPLLRSGLR*FIHLSLQLFPHL*SPASLGTELQQPWPC 350
R C S P LRSG R*FIH SLQL P PA+LG+E Q P PC
Sbjct: 3 RRLCRRMMSSSSSSVKLPRLRSGRR*FIHRSLQLLPQRGRPAALGSERQHPSPC 164
>gb|CW450438.1|CW450438 fsbb001f189b06k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f189b06, DNA
sequence
Length = 785
Score = 149 bits (321), Expect = 1e-034
Identities = 54/93 (58%), Positives = 69/93 (74%)
Frame = +3 / +2
Query: 255 EMGRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWIN 434
+ GR CC K KG W+ +ED++L+ +I HG GCW S+PK AGL RCGKSCRLRWIN
Sbjct: 464 DKGRSPCCEKAHTNKGAWTKDEDQRLVAYIKAHGEGCWRSLPKAAGLLRCGKSCRLRWIN 643
Query: 435 YLRPDLKRGAFAQDEEDLIIELHAVLGNRWSQI 533
YLRPDLKRG F +E++LII H +LGN++ +I
Sbjct: 644 YLRPDLKRGNFTHEEDELIIRFHGLLGNKYVRI 742
Score = 80.8 bits (170), Expect = 7e-014
Identities = 37/86 (43%), Positives = 53/86 (61%)
Frame = -2 / -2
Query: 518 VPEDSVQLDDEVFFVLGECPSLEVWPQIVYPPQPTTLSAPLKPSEFGNRAPAAMAMLCYV 339
V E+ V+ DDE F++GE +LEVW ++V PP+ L+A + G R PAA A+ V
Sbjct: 727 VSEEPVEPDDEFVFLVGEVAALEVWAEVVDPPEAAALAAAQQAGRLGERPPAAFAVGLDV 548
Query: 338 IHEFLILLRGPEPLSQLLLVAARMPP 261
E L+L+ GP L ++ L+AAR PP
Sbjct: 547 SDEPLVLILGPGALVRVRLLAAR*PP 470
Score = 59.7 bits (124), Expect = 1e-007
Identities = 28/61 (45%), Positives = 34/61 (55%)
Frame = -3 / -3
Query: 523 HLFPRTACXXXXXXXXSWANAPLLRSGLR*FIHLSLQLFPHL*SPASLGTELQQPWPCFV 344
+LFPR+ SW P LRSG R* IH QL P PA+LG++LQQP P +
Sbjct: 732 YLFPRSPWNLMMSSSSSWVKLPRLRSGRR*LIHRRRQLLPQRSRPAALGSDLQQPSPWAL 553
Query: 343 M 341
M
Sbjct: 552 M 550
Score = 38.2 bits (77), Expect = 0.45
Identities = 26/70 (37%), Positives = 29/70 (41%)
Frame = +1 / +3
Query: 262 GGILAATSRS*ERGSGPLRRMRNS*IT*QSMAMAAGALFPNSLGFKGAERVVG*GG*TI* 441
GG AA R+ R GP R S +T + A AAG P A R GG T
Sbjct: 471 GGHRAARRRTRTRAPGPRMRTSGSSLTSRPTAKAAGGRSPRRPACCAAARAAASGGSTTS 650
Query: 442 GQTSREGHSP 471
QTS SP
Sbjct: 651 AQTSSAATSP 680
>gb|BG947473.1|BG947473 IP1_4_H01.b1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 354
Score = 90.0 bits (190), Expect(2) = 1e-034
Identities = 34/50 (68%), Positives = 40/50 (80%)
Frame = +3 / +2
Query: 315 EEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRGA 464
EED+KL++ I +G CW +VPKLAGL RCGKSCRLRW NYLRP+ RGA
Sbjct: 17 EEDQKLVSFILGNGQCCWRAVPKLAGLLRCGKSCRLRWTNYLRPEPSRGA 166
Score = 79.9 bits (168), Expect(2) = 1e-034
Identities = 32/58 (55%), Positives = 42/58 (72%)
Frame = +3 / +1
Query: 453 KRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDP 626
KRG + EE L+I+LHA LGNRWS+IA+ LPGRTDNEIKN W +++ ++ G P
Sbjct: 157 KRGLLSDAEEKLVIDLHAQLGNRWSKIASHLPGRTDNEIKNHWEHPHQEEAQEDGDRP 330
Score = 59.7 bits (124), Expect(3) = 2e-023
Identities = 26/37 (70%), Positives = 27/37 (72%)
Frame = -3 / -1
Query: 463 APLLRSGLR*FIHLSLQLFPHL*SPASLGTELQQPWP 353
APL SG R* +H S QLFPHL SPASLGT QQ WP
Sbjct: 165 APLXGSGRR*LVHRSRQLFPHLSSPASLGTARQQHWP 55
Score = 56.5 bits (117), Expect(3) = 5e-016
Identities = 25/52 (48%), Positives = 33/52 (63%)
Frame = -2 / -3
Query: 461 PSLEVWPQIVYPPQPTTLSAPLKPSEFGNRAPAAMAMLCYVIHEFLILLRGP 306
PS + PQ+V PP+P L AP +P E G+ APAA+A+ E L+LLR P
Sbjct: 163 PS*XLRPQVVGPPEPAALPAPQQPGELGHGAPAALAVAEDEADELLVLLRRP 8
Score = 55.1 bits (114), Expect(3) = 2e-023
Identities = 21/39 (53%), Positives = 29/39 (74%)
Frame = -2 / -1
Query: 581 P*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGE 465
P +LDL++ PWQ+R NL PPV E S+Q+DDE+ +GE
Sbjct: 285 PVVLDLVVRSPWQVRRNLGPPVAELSMQVDDELLLGVGE 169
Score = 45.5 bits (93), Expect(3) = 5e-016
Identities = 21/41 (51%), Positives = 23/41 (56%)
Frame = -3 / -2
Query: 574 FLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANAPLL 452
FLISLSV PG C AI DHL P AC + + PLL
Sbjct: 278 FLISLSVRPGKCDAILDHLLPS*ACRSMTSFSSASESRPLL 156
Score = 39.1 bits (79), Expect = 0.24
Identities = 16/32 (50%), Positives = 20/32 (62%)
Frame = +3 / +2
Query: 549 GRTDNEIKNLWNSCIKKKLRQKGIDPNTHKPL 644
G + N+ IKKKL++ GIDP THKPL
Sbjct: 254 GERTTRSRTTGNTHIKKKLKKMGIDPLTHKPL 349
Score = 35.0 bits (70), Expect(3) = 2e-023
Identities = 14/20 (70%), Positives = 15/20 (75%)
Frame = -3 / -1
Query: 640 GLWVLGSMPFCLSFFLMHEF 581
GLWV GS+P LSFFLM F
Sbjct: 345 GLWVSGSIPIFLSFFLMWVF 286
Score = 22.1 bits (42), Expect(3) = 5e-016
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = -2 / -3
Query: 638 LVGVGINAFLPQLLLDARVP 579
LVG ++ L +LLLD VP
Sbjct: 343 LVGERVDPHLLELLLDVGVP 284
>gb|CW283140.1|CW283140 104_759_11409088_148_35474_056 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11409088, DNA
sequence
Length = 651
Score = 86.3 bits (182), Expect(2) = 1e-034
Identities = 33/47 (70%), Positives = 38/47 (80%)
Frame = +3 / -2
Query: 387 AGLQRCGKSCRLRWINYLRPDLKRGAFAQDEEDLIIELHAVLGNRWS 527
AGL RCGKSCRLRW NY RPDLKRG + EE L+I+LHA LGNR++
Sbjct: 587 AGLLRCGKSCRLRWTNYXRPDLKRGLLSDAEEKLVIDLHAQLGNRYT 447
Score = 83.1 bits (175), Expect(2) = 1e-034
Identities = 32/42 (76%), Positives = 37/42 (88%)
Frame = +3 / -1
Query: 519 RWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPNTHKPL 644
RWS+IA+ LPGRTDNEIKN WN+ IKKKL++ GIDP THKPL
Sbjct: 342 RWSKIASHLPGRTDNEIKNHWNTHIKKKLKKMGIDPLTHKPL 217
Score = 65.7 bits (137), Expect(2) = 2e-019
Identities = 29/41 (70%), Positives = 30/41 (73%)
Frame = -3 / +2
Query: 640 GLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHL 518
GLWV GS+P LSFFLM F FLISLSV PG C AI DHL
Sbjct: 221 GLWVSGSIPIFLSFFLMWVFQWFLISLSVRPGKCDAILDHL 343
Score = 52.8 bits (109), Expect(2) = 2e-019
Identities = 23/46 (50%), Positives = 30/46 (65%)
Frame = -2 / +3
Query: 527 RPPVPEDSVQLDDEVFFVLGECPSLEVWPQIVYPPQPTTLSAPLKP 390
R PV E S+Q+DDE+ +GE LEV P +V PP+P L AP +P
Sbjct: 447 RIPVAELSMQVDDELLLGVGEQAPLEVRPXVVGPPEPAALPAPQQP 584
Score = 51.9 bits (107), Expect(2) = 7e-014
Identities = 21/40 (52%), Positives = 28/40 (70%)
Frame = -2 / +1
Query: 638 LVGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPP 519
LVG ++ L +LLLD VP +LDL++ PWQ+R NL PP
Sbjct: 223 LVGERVDPHLLELLLDVGVPVVLDLVVRSPWQVRRNLGPP 342
Score = 47.8 bits (98), Expect(2) = 7e-014
Identities = 22/46 (47%), Positives = 26/46 (56%)
Frame = -3 / +1
Query: 523 HLFPRTACXXXXXXXXSWANAPLLRSGLR*FIHLSLQLFPHL*SPA 386
+L P AC + + PLLRSG * +H S QLFPHL SPA
Sbjct: 451 YLLPS*ACRSMTSFSSASESRPLLRSGRX*LVHRSRQLFPHLSSPA 588
Score = 38.6 bits (78), Expect = 0.33
Identities = 19/40 (47%), Positives = 24/40 (60%)
Frame = +2 / -3
Query: 521 VVSNCSAAARED***DQESMELVHQEEAEAERH*SQHPQA 640
VV +C A AR + DQE +E HQEEA+ + HPQA
Sbjct: 340 VVQDCVALARANGQRDQEPLEHPHQEEAQEDGDRPAHPQA 221
>gb|AF474129.1| Sorghum bicolor typical P-type R2R3 Myb protein (Myb42) gene, partial
cds
Length = 1357
Score = 127 bits (273), Expect(2) = 2e-034
Identities = 50/84 (59%), Positives = 63/84 (75%)
Frame = +3 / +3
Query: 387 AGLQRCGKSCRLRWINYLRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNE 566
AGL+R GKSCRLRW+NYLRPDL+RG E+ LI+ELH+ GNRWS+IA LPGRTDNE
Sbjct: 969 AGLKRTGKSCRLRWLNYLRPDLRRGNITPQEQLLILELHSRWGNRWSKIAQHLPGRTDNE 1148
Query: 567 IKNLWNSCIKKKLRQKGIDPNTHK 638
IKN W + ++K +Q D N+ +
Sbjct: 1149 IKNYWRTRVQKHAKQLKCDVNSQQ 1220
Score = 61.6 bits (128), Expect = 4e-008
Identities = 35/84 (41%), Positives = 38/84 (45%)
Frame = -3 / -1
Query: 634 WVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANAPL 455
W+L S CL+ F FLISLSV PG C AI D P+ C P
Sbjct: 1216 WLLTSHLSCLACFCTRVRQ*FLISLSVRPGRCCAILDQRLPQRECSSRMSSCSCGVMLPR 1037
Query: 454 LRSGLR*FIHLSLQLFPHL*SPAS 383
RSG R* H QL P SPAS
Sbjct: 1036 RRSGRR*LSHRRRQLLPVRFSPAS 965
Score = 56.5 bits (117), Expect = 1e-006
Identities = 28/83 (33%), Positives = 46/83 (55%)
Frame = -2 / -3
Query: 638 LVGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECP 459
L+ V + L +LL AR P +LDL++ P ++ +L P V VQL DE + +
Sbjct: 1220 LLAVDVALELLGVLLHARAPVVLDLVVGAPREVLRDLGPAVAPARVQLQDEQLLLRRDVA 1041
Query: 458 SLEVWPQIVYPPQPTTLSAPLKP 390
+ EV ++V PP+ L++ L+P
Sbjct: 1040 APEVRAEVVEPPEAAALASALQP 972
Score = 46.0 bits (94), Expect(2) = 2e-034
Identities = 16/35 (45%), Positives = 25/35 (71%)
Frame = +3 / +1
Query: 288 KLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAG 392
+LR+G W+ EED L+N++ HG G W+S+ + AG
Sbjct: 271 ELRRGPWTVEEDLLLVNYVAAHGEGRWNSLARSAG 375
>gb|CW364997.1|CW364997 fsbb001f037f01f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f037f01, DNA
sequence
Length = 608
Score = 90.4 bits (191), Expect(2) = 2e-034
Identities = 35/45 (77%), Positives = 38/45 (84%)
Frame = +3 / -1
Query: 387 AGLQRCGKSCRLRWINYLRPDLKRGAFAQDEEDLIIELHAVLGNR 521
AGL RCGKSCRLRW NYLRPDLKRG + DEE L+I+LHA LGNR
Sbjct: 491 AGLLRCGKSCRLRWTNYLRPDLKRGLLSDDEERLVIDLHAQLGNR 357
Score = 82.2 bits (173), Expect(2) = 2e-034
Identities = 33/44 (75%), Positives = 37/44 (84%)
Frame = +3 / -1
Query: 519 RWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPNTHKPLTE 650
RWS+IAAQLPGRTDNEIKN WN+ I+KKL + GIDP TH PL E
Sbjct: 227 RWSKIAAQLPGRTDNEIKNHWNTHIRKKLLRMGIDPVTHLPLQE 96
Score = 63.4 bits (132), Expect(2) = 1e-021
Identities = 29/44 (65%), Positives = 31/44 (70%)
Frame = -3 / +1
Query: 649 SVSGLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHL 518
S +G WV GS+P SF M F FLISLSVLPGSCAAI DHL
Sbjct: 97 SCNGRWVTGSIPIRSSFLRMCVFQWFLISLSVLPGSCAAILDHL 228
Score = 62.5 bits (130), Expect(2) = 1e-021
Identities = 28/57 (49%), Positives = 34/57 (59%)
Frame = -2 / +3
Query: 539 RCNLRPPVPEDSVQLDDEVFFVLGECPSLEVWPQIVYPPQPTTLSAPLKPSEFGNRA 369
R + PVPE VQ+DDE V+GE LEV PQ+V PPQP L AP +P + A
Sbjct: 339 RISQHAPVPELRVQVDDEPLLVVGEEAPLEVGPQVVGPPQPAALPAPQQPCSSSSHA 509
Score = 60.2 bits (125), Expect(2) = 5e-015
Identities = 27/47 (57%), Positives = 29/47 (61%)
Frame = -3 / +1
Query: 523 HLFPRTACXXXXXXXXSWANAPLLRSGLR*FIHLSLQLFPHL*SPAS 383
HLFP AC S P LRSGLR* +H SLQLFPHL SPA+
Sbjct: 355 HLFPSCACRSMTSRSSSSERRPRLRSGLR*LVHRSLQLFPHLSSPAA 495
Score = 46.9 bits (96), Expect(2) = 5e-015
Identities = 21/44 (47%), Positives = 28/44 (63%)
Frame = -2 / +3
Query: 650 LSKWLVGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPP 519
L +W VG G++ QLL D VP +LDL++ PP LR +L PP
Sbjct: 96 LLQWEVGDGVDPHPEQLLADVCVPVVLDLVVRPPR*LRRDLGPP 227
Score = 35.4 bits (71), Expect = 3.0
Identities = 17/36 (47%), Positives = 20/36 (55%)
Frame = +1 / -2
Query: 535 QRSCQGGLIMRSRIYGTRASRRS*GRKALIPTPTSH 642
+RS +GG RSR GT S RS P+PTSH
Sbjct: 211 RRSYRGGRTTRSRTTGTHTSARSCSGWGSTPSPTSH 104
>gb|CW298181.1|CW298181 104_780_11462443_148_35652_070 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11462443, DNA
sequence
Length = 545
Score = 90.4 bits (191), Expect(2) = 2e-034
Identities = 33/42 (78%), Positives = 39/42 (92%)
Frame = +3 / +3
Query: 399 RCGKSCRLRWINYLRPDLKRGAFAQDEEDLIIELHAVLGNRW 524
RCGKSCRLRWINYLRPDLKRG F DE+DLII+LH++LGN++
Sbjct: 6 RCGKSCRLRWINYLRPDLKRGNFTADEDDLIIKLHSLLGNKY 131
Score = 81.7 bits (172), Expect(2) = 2e-034
Identities = 31/48 (64%), Positives = 39/48 (81%)
Frame = +3 / +1
Query: 519 RWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPNTHKPLTEADHG 662
RWS IAA+LPGRTDNEIKN WN+ I++KL +GIDP TH+P+ +A G
Sbjct: 268 RWSLIAARLPGRTDNEIKNYWNTHIRRKLLGRGIDPVTHRPIADAGAG 411
Score = 50.1 bits (103), Expect(2) = 9e-011
Identities = 28/48 (58%), Positives = 29/48 (60%)
Frame = -3 / -1
Query: 661 P*SASVSGLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHL 518
P AS G V GSMP SF M F FLISLSV PGS AA+ DHL
Sbjct: 410 PAPASAMGRCVTGSMPLPSSFRRMCVFQ*FLISLSVRPGSRAAMSDHL 267
Score = 42.3 bits (86), Expect(2) = 9e-011
Identities = 19/39 (48%), Positives = 26/39 (66%)
Frame = -2 / -1
Query: 518 VPEDSVQLDDEVFFVLGECPSLEVWPQIVYPPQPTTLSA 402
V E++VQLDDEV V GE +LEV ++V P + L+A
Sbjct: 125 VAEEAVQLDDEVVLVGGEVAALEVGAEVVDPAEAAALAA 9
Score = 39.6 bits (80), Expect = 0.17
Identities = 17/36 (47%), Positives = 24/36 (66%)
Frame = -2 / -3
Query: 626 GINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPP 519
G++A QL D RVP +LDL++ PP + R + RPP
Sbjct: 375 GVDAPAKQLPPDVRVPVVLDLVVRPPREPRGDERPP 268
>gb|CW037895.1|CW037895 104_269_10504606_114_30383 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10504606, DNA
sequence
Length = 760
Score = 124 bits (266), Expect(2) = 2e-034
Identities = 44/72 (61%), Positives = 59/72 (81%)
Frame = +3 / +2
Query: 387 AGLQRCGKSCRLRWINYLRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNE 566
AGL RCGKSCRLRW+NYLRPD+K G + + E+ +I L+ +G+RWS IA++LPGRTDN+
Sbjct: 260 AGLNRCGKSCRLRWLNYLRPDIKHGGYTEQEDRIICSLYNSIGSRWSIIASKLPGRTDND 439
Query: 567 IKNLWNSCIKKK 602
+KN WN+ +KKK
Sbjct: 440 VKNYWNTKLKKK 475
Score = 62.0 bits (129), Expect(2) = 3e-009
Identities = 28/71 (39%), Positives = 43/71 (60%)
Frame = -2 / -1
Query: 602 LLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECPSLEVWPQIVYPP 423
LLL+ VP +LD+++ P QL + PP P+ V+ D+ +L L+V Q+V PP
Sbjct: 475 LLLELGVPVVLDVVVRPARQLGRDDGPPAPDGVVEGADDPVLLLRVAAVLDVRAQVVEPP 296
Query: 422 QPTTLSAPLKP 390
QP L+AP++P
Sbjct: 295 QPAALAAPVQP 263
Score = 47.8 bits (98), Expect(2) = 2e-034
Identities = 17/35 (48%), Positives = 23/35 (65%)
Frame = +3 / +2
Query: 258 MGRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHG 362
MG CC K +++G WSPEEDE L +++ HG G
Sbjct: 23 MGCPPCCDKTSVKRGPWSPEEDELLRSYVHNHGTG 127
Score = 38.6 bits (78), Expect(3) = 7e-006
Identities = 18/32 (56%), Positives = 21/32 (65%)
Frame = -3 / -2
Query: 607 LSFFLMHEFHRFLISLSVLPGSCAAI*DHLFP 512
++FFL F FL SLSV PGS A+ DHL P
Sbjct: 480 IAFFLSLVFQ*FLTSLSVRPGSLDAMMDHLLP 385
Score = 31.3 bits (62), Expect(3) = 7e-006
Identities = 15/25 (60%), Positives = 15/25 (60%)
Frame = -3 / -2
Query: 460 PLLRSGLR*FIHLSLQLFPHL*SPA 386
P L SG R* H S QL PH SPA
Sbjct: 333 PCLMSGRR*LSHRSRQLLPHRFSPA 259
Score = 25.8 bits (50), Expect(2) = 3e-009
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = -1 / -3
Query: 327 SHPPQGTRAPFSASACSSKNASP 259
+ PP T AP S S+C S +P
Sbjct: 92 ARPPLATTAPASHSSCRSTAGNP 24
Score = 25.4 bits (49), Expect(3) = 7e-006
Identities = 15/36 (41%), Positives = 19/36 (52%)
Frame = -2 / -1
Query: 365 AAMAMLCYVIHEFLILLRGPEPLSQLLLVAARMPPH 258
AA A++ V + L+LL P P LVAAR H
Sbjct: 130 AAGAVVVDVAPQQLVLLWRPRPPLHTRLVAARRATH 23
>gb|CW128216.1|CW128216 104_509_11113884_148_34749_036 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11113884, DNA
sequence
Length = 457
Score = 148 bits (318), Expect = 3e-034
Identities = 54/93 (58%), Positives = 68/93 (73%)
Frame = +3 / -2
Query: 255 EMGRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWIN 434
+ GR CC K KG W+ +ED++L+ +I HG GCW S+PK AGL RCGKSCRLRWI
Sbjct: 450 DKGRSPCCEKAHTNKGAWTKDEDQRLVAYIKAHGEGCWRSLPKAAGLLRCGKSCRLRWIK 271
Query: 435 YLRPDLKRGAFAQDEEDLIIELHAVLGNRWSQI 533
YLRPDLKRG F +EE+LII H +LGN++ +I
Sbjct: 270 YLRPDLKRGNFTHEEEELIIRFHGLLGNKYVRI 172
Score = 81.7 bits (172), Expect = 4e-014
Identities = 36/86 (41%), Positives = 52/86 (60%)
Frame = -2 / +1
Query: 518 VPEDSVQLDDEVFFVLGECPSLEVWPQIVYPPQPTTLSAPLKPSEFGNRAPAAMAMLCYV 339
V E+ V+ DDE F++GE P+LEVW ++ PP+ L+A + G R P A A+ V
Sbjct: 187 VSEEPVEPDDEFLFLVGEVPALEVWAEVFDPPEAAALAAAQQAGRLGERPPTAFAVGLDV 366
Query: 338 IHEFLILLRGPEPLSQLLLVAARMPP 261
E L+L+ GP L ++ L+AAR PP
Sbjct: 367 SDEPLVLILGPRALVRVRLLAAR*PP 444
Score = 57.0 bits (118), Expect = 1e-006
Identities = 27/61 (44%), Positives = 33/61 (54%)
Frame = -3 / +2
Query: 523 HLFPRTACXXXXXXXXSWANAPLLRSGLR*FIHLSLQLFPHL*SPASLGTELQQPWPCFV 344
+LFPR+ SW P LRSG R IH QL P PA+LG++LQQP P +
Sbjct: 182 YLFPRSPWNLMMSSSSSWVKFPRLRSGRRYLIHRRRQLLPQRSRPAALGSDLQQPSPWAL 361
Query: 343 M 341
M
Sbjct: 362 M 364
>gb|CW433017.1|CW433017 fsbb001f148a21k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f148a21, DNA
sequence
Length = 723
Score = 92.3 bits (195), Expect(2) = 3e-034
Identities = 35/45 (77%), Positives = 39/45 (86%)
Frame = +3 / +2
Query: 387 AGLQRCGKSCRLRWINYLRPDLKRGAFAQDEEDLIIELHAVLGNR 521
AGLQRCGKSCRLRW NYLRPD+KRG F+ EE II+LHA+LGNR
Sbjct: 338 AGLQRCGKSCRLRWTNYLRPDIKRGKFSLQEEQTIIQLHALLGNR 472
Score = 76.2 bits (160), Expect(2) = 3e-034
Identities = 28/59 (47%), Positives = 37/59 (62%)
Frame = +3 / +1
Query: 216 CEFGWSSQVLHCVEMGRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAG 392
C+F + H MGR CC K L+KG W+PEED+KL+ I +HGHG W ++P AG
Sbjct: 91 CQFDLRKIIHHTALMGRSPCCEKIGLKKGPWTPEEDQKLLAFIEEHGHGSWRALPAKAG 267
Score = 48.7 bits (100), Expect(2) = 2e-005
Identities = 20/27 (74%), Positives = 22/27 (81%)
Frame = -3 / -1
Query: 466 NAPLLRSGLR*FIHLSLQLFPHL*SPA 386
N PLL SGLR*F+HL+LQL PHL PA
Sbjct: 417 NLPLLMSGLR*FVHLNLQLLPHLCKPA 337
Score = 45.1 bits (92), Expect(2) = 0.002
Identities = 19/43 (44%), Positives = 27/43 (62%)
Frame = -2 / -3
Query: 521 PVPEDSVQLDDEVFFVLGECPSLEVWPQIVYPPQPTTLSAPLK 393
PV S++LDD + F+ E L+V PQ+V PPQ L+ PL+
Sbjct: 472 PVA*KSMKLDDGLLFLQAELAPLDVRPQVVCPPQSAALTTPLQ 344
Score = 22.6 bits (43), Expect(2) = 0.002
Identities = 10/26 (38%), Positives = 13/26 (50%)
Frame = -1 / -3
Query: 1839 QKLKYAKVQSCTEGKHQFSRERKGDS 1762
QKL Y + G+ Q R R+G S
Sbjct: 667 QKLTYMLGKLSLNGRQQSDRNRRGTS 590
Score = 22.1 bits (42), Expect(2) = 2e-005
Identities = 13/38 (34%), Positives = 18/38 (47%)
Frame = -2 / -1
Query: 371 APAAMAMLCYVIHEFLILLRGPEPLSQLLLVAARMPPH 258
+P M++L + LIL R P Q L+ A PH
Sbjct: 246 SPTPMSVLLNEGKQLLILFRRPWTFLQSNLLTAW*SPH 133
>gb|CW265473.1|CW265473 104_734_11231898_148_35264_067 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11231898, DNA
sequence
Length = 616
Score = 98.2 bits (208), Expect(2) = 6e-034
Identities = 38/45 (84%), Positives = 40/45 (88%)
Frame = +3 / +3
Query: 387 AGLQRCGKSCRLRWINYLRPDLKRGAFAQDEEDLIIELHAVLGNR 521
AGLQRCGKSCRLRW+NYLRPDLKRG F+Q EEDLII LH LGNR
Sbjct: 405 AGLQRCGKSCRLRWMNYLRPDLKRGRFSQHEEDLIISLHKALGNR 539
Score = 72.5 bits (152), Expect(2) = 6e-034
Identities = 25/40 (62%), Positives = 33/40 (82%)
Frame = +3 / +2
Query: 273 CCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAG 392
C ++K+RKGLWSPEEDE+L +HI + G CWSS+P+LAG
Sbjct: 125 CSEEKKVRKGLWSPEEDERLASHIARFGVSCWSSIPELAG 244
Score = 61.1 bits (127), Expect(2) = 2e-011
Identities = 25/43 (58%), Positives = 32/43 (74%)
Frame = -2 / -3
Query: 521 PVPEDSVQLDDEVFFVLGECPSLEVWPQIVYPPQPTTLSAPLK 393
PV + V+ +DEV FVLGE LEV PQ+V+PPQP L+APL+
Sbjct: 539 PVAKCFVERNDEVLFVLGEAAPLEVRPQVVHPPQPAALAAPLQ 411
Score = 46.4 bits (95), Expect(3) = 2e-006
Identities = 23/53 (43%), Positives = 25/53 (47%)
Frame = -3 / -1
Query: 541 CAAI*DHLFPRTACXXXXXXXXSWANAPLLRSGLR*FIHLSLQLFPHL*SPAS 383
C A +L P W P LRSG R*FIH S QL PHL PA+
Sbjct: 559 C*AEVSYLLPSALWREMMRSSSCWEKRPRLRSGRR*FIHRSRQLLPHLCKPAN 401
Score = 34.1 bits (68), Expect(2) = 2e-011
Identities = 19/38 (50%), Positives = 24/38 (63%)
Frame = -2 / -1
Query: 386 EFGNRAPAAMAMLCYVIHEFLILLRGPEPLSQLLLVAA 273
+FG+ APAA A V E L+LLR P+ L LLL+ A
Sbjct: 238 KFGDGAPAADAEAGDVGGEPLVLLRRPQALPHLLLLGA 125
Score = 27.6 bits (54), Expect(3) = 2e-006
Identities = 15/39 (38%), Positives = 18/39 (46%)
Frame = -1 / -3
Query: 372 SSSSHGHALLCDS*VSHPPQGTRAPFSASACSSKNASPS 256
SSSS + C S PP T P S S+ S +PS
Sbjct: 224 SSSS*RRSGRCGRRASRPPPATTGPSSPSSPRSSKGAPS 108
Score = 22.6 bits (43), Expect(3) = 2e-006
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = -3 / -2
Query: 394 SPASLGTELQQPWP 353
SPAS G ELQQ P
Sbjct: 246 SPASSGMELQQLTP 205
>gb|CW209992.1|CW209992 104_640_11189556_116_37000_044 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11189556, DNA
sequence
Length = 669
Score = 92.3 bits (195), Expect(2) = 7e-034
Identities = 35/45 (77%), Positives = 39/45 (86%)
Frame = +3 / -3
Query: 387 AGLQRCGKSCRLRWINYLRPDLKRGAFAQDEEDLIIELHAVLGNR 521
AGLQRCGKSCRLRW NYLRPD+KRG F+ EE II+LHA+LGNR
Sbjct: 145 AGLQRCGKSCRLRWTNYLRPDIKRGKFSLQEEQTIIQLHALLGNR 11
Score = 78.5 bits (165), Expect(2) = 7e-034
Identities = 27/45 (60%), Positives = 34/45 (75%)
Frame = +3 / -2
Query: 258 MGRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAG 392
MGR CC K L+KG W+PEED+KL+ +I +HGHGCW S+P AG
Sbjct: 416 MGRSPCCEKDGLKKGPWTPEEDQKLLAYIEQHGHGCWRSLPAKAG 282
Score = 53.8 bits (111), Expect(2) = 3e-014
Identities = 24/41 (58%), Positives = 29/41 (70%)
Frame = -2 / +3
Query: 380 GNRAPAAMAMLCYVIHEFLILLRGPEPLSQLLLVAARMPPH 258
G RAPAAMA+L V + L+LLR P PL Q +L+AAR PH
Sbjct: 294 GQRAPAAMAVLLNVGEQLLVLLRRPRPLLQPVLLAARRSPH 416
Score = 50.6 bits (104), Expect(2) = 3e-014
Identities = 20/51 (39%), Positives = 31/51 (60%)
Frame = -2 / +2
Query: 521 PVPEDSVQLDDEVFFVLGECPSLEVWPQIVYPPQPTTLSAPLKPSEFGNRA 369
PV E V+LDD + + E L+V P++V PP+ L+APL+P G+ +
Sbjct: 11 PVAEQRVELDDGLLLLQAELAPLDVRPEVVRPPEAAALAAPLQPCATGHHS 163
Score = 40.0 bits (81), Expect(2) = 2e-006
Identities = 21/50 (42%), Positives = 23/50 (46%)
Frame = -3 / +3
Query: 523 HLFPRTACXXXXXXXXSWANAPLLRSGLR*FIHLSLQLFPHL*SPASLGT 374
HL P +A N P L SG R*F+H QL PH SPA T
Sbjct: 9 HLLPSSAWSWMMVCSSCRLNLPRLMSGRR*FVHRRRQLLPHRCSPAPPAT 158
Score = 38.6 bits (78), Expect = 0.33
Identities = 24/52 (46%), Positives = 25/52 (48%)
Frame = +1 / -3
Query: 226 VGAPRFCIALRWGGILAATSRS*ERGSGPLRRMRNS*IT*QSMAMAAGALFP 381
V A R RWG AA * RG G RR R+ T S AMAAGA P
Sbjct: 448 VAARRRAAGGRWGDRRAARRTG*RRGRGRRRRTRSCSPTLSSTAMAAGARCP 293
Score = 37.7 bits (76), Expect(2) = 2e-006
Identities = 19/49 (38%), Positives = 22/49 (44%)
Frame = -1 / +2
Query: 372 SSSSHGHALLCDS*VSHPPQGTRAPFSASACSSKNASPSQRNAEPGSSN 226
S+SSHG A C S PP + AP S S +PS P SN
Sbjct: 302 SASSHGRAAQCRRAASGPPPASTAPSSTRPSRSTAIAPSPARRAPPRSN 448
>gb|CW501261.1|CW501261 fsbb001f296p22k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f296p22, DNA
sequence
Length = 524
Score = 88.1 bits (186), Expect(2) = 7e-034
Identities = 32/45 (71%), Positives = 39/45 (86%)
Frame = +3 / -2
Query: 387 AGLQRCGKSCRLRWINYLRPDLKRGAFAQDEEDLIIELHAVLGNR 521
AGL RCGKSCRLRWINYLRPDLKRG F ++E++LII+ H + GN+
Sbjct: 460 AGLLRCGKSCRLRWINYLRPDLKRGNFTEEEDELIIKFHELFGNK 326
Score = 79.0 bits (166), Expect(2) = 7e-034
Identities = 30/45 (66%), Positives = 35/45 (77%)
Frame = +3 / -2
Query: 519 RWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPNTHKPLTEA 653
RWS IA +LPGRTDNEIKN WN+ IK+KL +G DP TH+PL A
Sbjct: 235 RWSLIAGRLPGRTDNEIKNYWNTHIKRKLLARGTDPQTHRPLAAA 101
Score = 56.5 bits (117), Expect(2) = 1e-017
Identities = 23/43 (53%), Positives = 31/43 (72%)
Frame = -2 / +2
Query: 518 VPEDSVQLDDEVFFVLGECPSLEVWPQIVYPPQPTTLSAPLKP 390
V E+ V+LDDE+ F+LGE +LEV ++V PPQP L AP +P
Sbjct: 329 VAEELVELDDELVFLLGEVAALEVRAEVVDPPQPAALPAPQQP 457
Score = 56.1 bits (116), Expect(2) = 1e-017
Identities = 27/45 (60%), Positives = 30/45 (66%)
Frame = -3 / +3
Query: 652 ASVSGLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHL 518
A+ G WV GS+P SF LM F FLISLSVLPGS A+ DHL
Sbjct: 102 AAARGRWVCGSVPRARSFRLMCVFQ*FLISLSVLPGSLPAMSDHL 236
Score = 42.3 bits (86), Expect(2) = 8e-008
Identities = 21/46 (45%), Positives = 25/46 (54%)
Frame = -3 / +3
Query: 523 HLFPRTACXXXXXXXXSWANAPLLRSGLR*FIHLSLQLFPHL*SPA 386
+L P+++ S P LRSG R* IH S QLFPH SPA
Sbjct: 324 YLLPKSSWNLMMSSSSSSVKLPRLRSGRR*LIHRSRQLFPHRSSPA 461
Score = 36.8 bits (74), Expect(2) = 8e-008
Identities = 17/39 (43%), Positives = 24/39 (61%)
Frame = -2 / +2
Query: 635 VGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPP 519
VG+ + A +L LD RVP +LDL++ P Q + RPP
Sbjct: 119 VGLRVRAPSQELPLDVRVPVVLDLVVRPARQSPGDERPP 235
>gb|AF470071.1| Sorghum bicolor P-type R2R3 Myb protein (Myb68) gene, partial cds
Length = 1953
Score = 92.3 bits (195), Expect(3) = 7e-034
Identities = 35/45 (77%), Positives = 39/45 (86%)
Frame = +3 / +3
Query: 387 AGLQRCGKSCRLRWINYLRPDLKRGAFAQDEEDLIIELHAVLGNR 521
AGLQRCGKSCRLRW NYLRPD+KRG F+ EE II+LHA+LGNR
Sbjct: 1557 AGLQRCGKSCRLRWTNYLRPDIKRGKFSLQEEQTIIQLHALLGNR 1691
Score = 78.5 bits (165), Expect(3) = 7e-034
Identities = 27/45 (60%), Positives = 34/45 (75%)
Frame = +3 / +2
Query: 258 MGRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAG 392
MGR CC K L+KG W+PEED+KL+ +I +HGHGCW S+P AG
Sbjct: 1286 MGRSPCCEKDGLKKGPWTPEEDQKLLAYIEQHGHGCWRSLPAKAG 1420
Score = 53.8 bits (111), Expect(2) = 1e-013
Identities = 24/41 (58%), Positives = 29/41 (70%)
Frame = -2 / -3
Query: 380 GNRAPAAMAMLCYVIHEFLILLRGPEPLSQLLLVAARMPPH 258
G RAPAAMA+L V + L+LLR P PL Q +L+AAR PH
Sbjct: 1408 GQRAPAAMAVLLNVGEQLLVLLRRPRPLLQPVLLAARRSPH 1286
Score = 50.6 bits (104), Expect(2) = 1e-013
Identities = 20/51 (39%), Positives = 31/51 (60%)
Frame = -2 / -2
Query: 521 PVPEDSVQLDDEVFFVLGECPSLEVWPQIVYPPQPTTLSAPLKPSEFGNRA 369
PV E V+LDD + + E L+V P++V PP+ L+APL+P G+ +
Sbjct: 1691 PVAEQRVELDDGLLLLQAELAPLDVRPEVVRPPEAAALAAPLQPCATGHHS 1539
Score = 40.0 bits (81), Expect(2) = 3e-006
Identities = 21/50 (42%), Positives = 23/50 (46%)
Frame = -3 / -3
Query: 523 HLFPRTACXXXXXXXXSWANAPLLRSGLR*FIHLSLQLFPHL*SPASLGT 374
HL P +A N P L SG R*F+H QL PH SPA T
Sbjct: 1693 HLLPSSAWSWMMVCSSCRLNLPRLMSGRR*FVHRRRQLLPHRCSPAPPAT 1544
Score = 38.6 bits (78), Expect = 0.33
Identities = 24/52 (46%), Positives = 25/52 (48%)
Frame = +1 / +3
Query: 226 VGAPRFCIALRWGGILAATSRS*ERGSGPLRRMRNS*IT*QSMAMAAGALFP 381
V A R RWG AA * RG G RR R+ T S AMAAGA P
Sbjct: 1254 VAARRRAAGGRWGDRRAARRTG*RRGRGRRRRTRSCSPTLSSTAMAAGARCP 1409
Score = 37.7 bits (76), Expect = 0.62
Identities = 19/49 (38%), Positives = 22/49 (44%)
Frame = -1 / -2
Query: 372 SSSSHGHALLCDS*VSHPPQGTRAPFSASACSSKNASPSQRNAEPGSSN 226
S+SSHG A C S PP + AP S S +PS P SN
Sbjct: 1400 SASSHGRAAQCRRAASGPPPASTAPSSTRPSRSTAIAPSPARRAPPRSN 1254
Score = 33.6 bits (67), Expect(2) = 3e-006
Identities = 12/18 (66%), Positives = 13/18 (72%)
Frame = -3 / -1
Query: 394 SPASLGTELQQPWPCFVM 341
SPA G+E QQPWPC M
Sbjct: 1422 SPALAGSERQQPWPCCSM 1369
Score = 23.5 bits (45), Expect(3) = 7e-034
Identities = 7/16 (43%), Positives = 9/16 (56%)
Frame = +1 / +3
Query: 10 PCFPLKSPICSHAVAQ 57
PC P +P C H A+
Sbjct: 531 PCIPASTPRCVHGKAR 578
>gb|CW369035.1|CW369035 fsbb001f043e07k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f043e07, DNA
sequence
Length = 733
Score = 146 bits (314), Expect = 9e-034
Identities = 53/85 (62%), Positives = 66/85 (77%)
Frame = +3 / -1
Query: 258 MGRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINY 437
MGR CC K KG W+ EED++L+ +I HG GCW S+PK AGL RCGKSCRLRW+NY
Sbjct: 256 MGRSPCCEKAHTNKGAWTKEEDQRLIAYIKAHGEGCWRSLPKAAGLLRCGKSCRLRWMNY 77
Query: 438 LRPDLKRGAFAQDEEDLIIELHAVL 512
LRPDLKRG F D++++II+LHA+L
Sbjct: 76 LRPDLKRGNFTDDDDEIIIKLHALL 2
Score = 83.1 bits (175), Expect = 1e-014
Identities = 37/85 (43%), Positives = 54/85 (63%)
Frame = -2 / +2
Query: 512 EDSVQLDDEVFFVLGECPSLEVWPQIVYPPQPTTLSAPLKPSEFGNRAPAAMAMLCYVIH 333
E V+LDD++ V+GE +LEV ++V+P QP L+A + G RAPA +A+ V
Sbjct: 2 EQGVELDDDLVVVVGEVAALEVRAEVVHPAQPAALAAAEEARGLGQRAPATLAVRLDVGD 181
Query: 332 EFLILLRGPEPLSQLLLVAARMPPH 258
+ L+LL GP L ++ L+AAR PPH
Sbjct: 182 QALVLLLGPRALVRVRLLAARRPPH 256
Score = 54.7 bits (113), Expect = 5e-006
Identities = 25/40 (62%), Positives = 28/40 (70%)
Frame = -3 / +3
Query: 460 PLLRSGLR*FIHLSLQLFPHL*SPASLGTELQQPWPCFVM 341
P LRSG R*FI SLQL P PA+LG+E QQP PC +M
Sbjct: 54 PRLRSGRR*FIQRSLQLLPQRRRPAALGSERQQPSPCALM 173
Score = 43.7 bits (89), Expect = 0.010
Identities = 27/71 (38%), Positives = 31/71 (43%)
Frame = +1 / -2
Query: 259 WGGILAATSRS*ERGSGPLRRMRNS*IT*QSMAMAAGALFPNSLGFKGAERVVG*GG*TI 438
WGG+ AA R+ R GP RR T + A AGA P A R G G*T
Sbjct: 255 WGGLRAARRRTRTRARGPRRRTSA*SPTSRRTARVAGARCPRPRASSAAARAAGCAG*TT 76
Query: 439 *GQTSREGHSP 471
+TS SP
Sbjct: 75 SARTSSAATSP 43
>gb|CW392901.1|CW392901 fsbb001f079l18k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f079l18, DNA
sequence
Length = 742
Score = 146 bits (314), Expect = 9e-034
Identities = 55/87 (63%), Positives = 66/87 (75%)
Frame = +3 / -1
Query: 261 GRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINYL 440
GR CC K L +G W+P+ED +L+ +I KHGH W ++PK AGL RCGKSCRLRWINYL
Sbjct: 379 GRAPCCAKVGLNRGSWTPQEDMRLIAYIQKHGHANWRALPKQAGLLRCGKSCRLRWINYL 200
Query: 441 RPDLKRGAFAQDEEDLIIELHAVLGNR 521
RPDLKRG F DEE+ II LH +LGN+
Sbjct: 199 RPDLKRGNFTADEEETIIRLHGLLGNK 119
Score = 68.0 bits (142), Expect = 5e-010
Identities = 38/90 (42%), Positives = 48/90 (53%)
Frame = -2 / +2
Query: 518 VPEDSVQLDDEVFFVLGECPSLEVWPQIVYPPQPTTLSAPLKPSEFGNRAPAAMAMLCYV 339
VPE +VQ D + V GE +LEV PQ+V PPQP L P + G R P +A+L V
Sbjct: 122 VPEQAVQPYDGLLLVGGEVAALEVRPQVVDPPQPAALPTPQQTCLLGQRPPVGVAVLLDV 301
Query: 338 IHEFLILLRGPEPLSQLLLVAARMPPHLNA 249
E +LLR P + L AAR P +A
Sbjct: 302 GDEAHVLLRRPGAPVEPHLGAARRSPSPHA 391
Score = 68.0 bits (142), Expect = 5e-010
Identities = 31/61 (50%), Positives = 33/61 (54%)
Frame = -3 / +3
Query: 523 HLFPRTACXXXXXXXXSWANAPLLRSGLR*FIHLSLQLFPHL*SPASLGTELQQPWPCFV 344
+LFP C S P LRSG R* IH SLQLFPH PA LG+ Q WPCF
Sbjct: 117 YLFPSKPCSLMMVSSSSAVKLPRLRSGRR*LIHRSLQLFPHRSKPACLGSARQLAWPCFW 296
Query: 343 M 341
M
Sbjct: 297 M 299
>gb|AW671674.1|AW671674 LG1_349_F08.b1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 540
Score = 146 bits (314), Expect = 9e-034
Identities = 61/144 (42%), Positives = 86/144 (59%)
Frame = +3 / +1
Query: 291 LRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRGAFA 470
+RKG W+ EED +L+ + G W + K++GL+R GKSCRLRW+NYL P L+RG
Sbjct: 94 MRKGPWTEEEDAQLVWFVRLFGERRWDFLAKVSGLRRTGKSCRLRWVNYLHPGLRRGRIT 273
Query: 471 QDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPNTHKPLTE 650
DEE LI++LH G+RWS+IA LPGRTDNEIKN W + +K+ + T
Sbjct: 274 ADEERLILQLHEQWGSRWSRIARSLPGRTDNEIKNFWRTRARKQKAAAQQQQGSRSSKTA 453
Query: 651 ADHGGAAPTISTERTSGSSDINPS 722
+ G++ + S T+ S + S
Sbjct: 454 SAFSGSSSSSSVTATTSRSSCSGS 525
Score = 46.0 bits (94), Expect = 0.002
Identities = 22/60 (36%), Positives = 32/60 (53%)
Frame = -2 / -1
Query: 602 LLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECPSLEVWPQIVYPP 423
LL AR P +LDL++ P Q + RPP V+L D+ V G+ + E ++V PP
Sbjct: 405 LLPGARPPEVLDLVVGAPGQAPSDARPPAAPLLVELQDQALLVGGDAAAPEPRVEVVDPP 226
Score = 40.5 bits (82), Expect = 0.092
Identities = 24/65 (36%), Positives = 27/65 (41%)
Frame = -3 / -2
Query: 598 FLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANAPLLRSGLR*FIHLS 419
FL +FLISLSV PG A+ DH P + S P G R* H
Sbjct: 401 FLARVLQKFLISLSVRPGRLLAMRDHRLPHCSWSCRIRRSSSAVMRPRRSPGWR*LTHRR 222
Query: 418 LQLFP 404
QL P
Sbjct: 221 RQLLP 207
>gb|AY363161.1| Sorghum bicolor P-type R2R3 Myb protein (Myb86) gene, partial cds
Length = 752
Score = 79.4 bits (167), Expect(3) = 1e-033
Identities = 27/49 (55%), Positives = 41/49 (83%)
Frame = +3 / +2
Query: 387 AGLQRCGKSCRLRWINYLRPDLKRGAFAQDEEDLIIELHAVLGNRWSQI 533
AGL+RCGKSCRLRW+NYLRP++K G F+++E+ +I+ L+ +G+R S +
Sbjct: 245 AGLKRCGKSCRLRWLNYLRPNIKHGGFSEEEDRIILSLYISIGSR*SSV 391
Score = 60.2 bits (125), Expect(3) = 1e-033
Identities = 23/29 (79%), Positives = 26/29 (89%)
Frame = +3 / +1
Query: 519 RWSQIAAQLPGRTDNEIKNLWNSCIKKKL 605
RWS IAAQLPGRTDN+IKN WN+ +KKKL
Sbjct: 544 RWSIIAAQLPGRTDNDIKNYWNTRLKKKL 630
Score = 51.0 bits (105), Expect(3) = 1e-033
Identities = 19/35 (54%), Positives = 25/35 (71%)
Frame = +3 / +1
Query: 258 MGRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHG 362
MGR CC K ++KG WSPEED KL ++I ++G G
Sbjct: 1 MGRAPCCDKATVKKGPWSPEEDAKLKSYIEQNGTG 105
Score = 46.4 bits (95), Expect(3) = 1e-012
Identities = 21/29 (72%), Positives = 22/29 (75%)
Frame = -3 / -1
Query: 604 SFFLMHEFHRFLISLSVLPGSCAAI*DHL 518
SFFL F F +SLSVLPGSCAAI DHL
Sbjct: 629 SFFLSLVFQ*FFMSLSVLPGSCAAIIDHL 543
Score = 44.1 bits (90), Expect(3) = 1e-012
Identities = 17/43 (39%), Positives = 25/43 (58%)
Frame = -2 / -2
Query: 521 PVPEDSVQLDDEVFFVLGECPSLEVWPQIVYPPQPTTLSAPLK 393
P V+ D F+LGE L+VWP++V PP+ L+ PL+
Sbjct: 379 PAAYADVEAKDYSVFLLGEPTVLDVWPEVVEPPEAAALATPLQ 251
Score = 37.7 bits (76), Expect = 0.62
Identities = 16/29 (55%), Positives = 21/29 (72%)
Frame = -2 / -3
Query: 605 QLLLDARVP*ILDLIISPPWQLRCNLRPP 519
+LLL+ RVP +L +I+ PP QLR RPP
Sbjct: 630 ELLLEPRVPVVLYVIVRPPRQLRRYYRPP 544
Score = 28.6 bits (56), Expect(3) = 1e-012
Identities = 17/35 (48%), Positives = 19/35 (54%)
Frame = -2 / -3
Query: 362 AMAMLCYVIHEFLILLRGPEPLSQLLLVAARMPPH 258
A A+L V E +LLR P L LVAAR PH
Sbjct: 105 AGAVLLDVGLELGVLLRRPRTLLHSSLVAARSSPH 1
>gb|CW221956.1|CW221956 104_657_11202124_116_37451_012 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11202124, DNA
sequence
Length = 681
Score = 118 bits (252), Expect(2) = 2e-033
Identities = 44/66 (66%), Positives = 54/66 (81%)
Frame = +3 / +1
Query: 390 GLQRCGKSCRLRWINYLRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEI 569
GL+R GKSCRLRW+NYL+PD+KRG +E+ LI+ELH+ GNRWS+IA LPGRTDNEI
Sbjct: 391 GLKRTGKSCRLRWLNYLKPDIKRGNLTPEEQLLILELHSKWGNRWSRIAQHLPGRTDNEI 570
Query: 570 KNLWNS 587
KN W +
Sbjct: 571 KNYWRT 588
Score = 71.6 bits (150), Expect(2) = 7e-014
Identities = 29/69 (42%), Positives = 44/69 (63%)
Frame = -2 / -1
Query: 596 LDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECPSLEVWPQIVYPPQP 417
L R P +LDL++ PPWQ+ + RPPV ++L+DE + E +L+V ++V PPQP
Sbjct: 597 LAPRPPVVLDLVVRPPWQVLRDPRPPVSPLGMELEDEELLLRREVAALDVRLEVVEPPQP 418
Query: 416 TTLSAPLKP 390
L+ PL+P
Sbjct: 417 AALAGPLQP 391
Score = 63.8 bits (133), Expect = 9e-009
Identities = 33/62 (53%), Positives = 34/62 (54%)
Frame = -3 / -2
Query: 574 FLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANAPLLRSGLR*FIHLSLQLFPHL* 395
FLISLSV PG C AI DHLFP S P L SGLR* HLS QL P L
Sbjct: 575 FLISLSVRPGRCCAILDHLFPHLEWSSRMRSCSSGVRLPRLMSGLR*LSHLSRQLLPVLF 396
Query: 394 SP 389
+P
Sbjct: 395 NP 390
Score = 47.3 bits (97), Expect(2) = 2e-033
Identities = 18/42 (42%), Positives = 27/42 (64%)
Frame = +3 / +2
Query: 288 KLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKS 413
+LR+G W+ EED LMN+I HG G W+ + + +G C +S
Sbjct: 185 ELRRGPWTLEEDNLLMNYIACHGEGRWNLLARCSGEYTCMES 310
Score = 35.0 bits (70), Expect = 4.2
Identities = 20/70 (28%), Positives = 26/70 (37%)
Frame = +1 / +2
Query: 391 GFKGAERVVG*GG*TI*GQTSREGHSPXXXXXXXXXXXXXXXXXXXXXQRSCQGGLIMRS 570
G +G R G*GG T TS S + +CQGG RS
Sbjct: 392 G*RGPARAAG*GGSTTSSLTSSAATSRRRSSSSSSSSIPSGETGGRGSRSTCQGGRTTRS 571
Query: 571 RIYGTRASRR 600
R G R +++
Sbjct: 572 RTTGGRGAKK 601
Score = 28.1 bits (55), Expect(2) = 7e-014
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = -2 / -3
Query: 380 GNRAPAAMAMLCYVIHEFLILLRGP 306
G PAA+A+ V+HE ++ L+ P
Sbjct: 277 GEEIPAALAVASNVVHEEVVFLKRP 203
>gb|CF074366.1|CF074366 FE1_24_A11.b1_A002 Iron-deficient seedlings Sorghum bicolor cDNA
clone FE1_24_A11_A002 3', mRNA sequence
Length = 646
Score = 105 bits (225), Expect(3) = 6e-033
Identities = 46/83 (55%), Positives = 54/83 (65%)
Frame = +3 / +1
Query: 1335 SFAETTTVMQNQSQTLYDDVIKAESQFNIEGICASWFXXXXXXXXXXVAPDMYDKDLQRM 1514
+F +T MQN SQ+LY+DVIKAESQFNIEG+CA+W V D+YDKDLQRM
Sbjct: 97 TFTDTPATMQNLSQSLYEDVIKAESQFNIEGLCAAWSQNLQPQQHLQVVSDLYDKDLQRM 276
Query: 1515 QLSFENI*ALCSTTWNRADQKKQ 1583
LSFENI*A C QK +
Sbjct: 277 SLSFENI*ATCCMQGTEK*QKAE 345
Score = 84.5 bits (178), Expect(2) = 4e-020
Identities = 42/70 (60%), Positives = 46/70 (65%)
Frame = -3 / -3
Query: 1552 VEHNA*IFSKDSCILCKSLSYMSGATXXXXXXX*FWNQEAHIPSMLNWLSALITSS*SVW 1373
++H A*IFSKD ILCKSLSY S T F +Q A PSMLNWLSALITSS S W
Sbjct: 314 MQHVA*IFSKDKDILCKSLSYKSDTTCRCCCGCRF*DQAAQRPSMLNWLSALITSSYSDW 135
Query: 1372 LWFCMTVVVS 1343
L FC+ VS
Sbjct: 134 LRFCIVAGVS 105
Score = 81.3 bits (171), Expect(2) = 1e-017
Identities = 37/65 (56%), Positives = 43/65 (66%)
Frame = +1 / +2
Query: 1354 QSCRTRAKRFMMM*SRQRANST*KGYVLLGSRISSHSNSCR*HQTCMTRTCKECNYLLRI 1533
Q CR A M S+ RANST*+ V G +I SHSN CR*+Q CMTR C+EC LLRI
Sbjct: 116 QRCRILASHCTKMLSKPRANST*RASVQPGLKICSHSNICR*YQICMTRICRECPCLLRI 295
Query: 1534 SRHYV 1548
SR +V
Sbjct: 296 SRQHV 310
Score = 71.6 bits (150), Expect(2) = 8e-013
Identities = 33/64 (51%), Positives = 38/64 (59%)
Frame = +2 / +3
Query: 1361 AEPEPNAL**CDQGREPIQHRRDMCFLVPESXXXXXXXGSTRHV*QGLAKNATIF*EYLG 1540
AE P + C Q REPIQHR +C LV +S GS R V*QG A+N +F*EYLG
Sbjct: 123 AES*PVTVRRCYQSREPIQHRGPLCSLVSKSAATATSAGSIRFV*QGFAENVLVF*EYLG 302
Query: 1541 IMFH 1552
M H
Sbjct: 303 NMLH 314
Score = 62.0 bits (129), Expect(2) = 2e-012
Identities = 32/65 (49%), Positives = 38/65 (58%)
Frame = -2 / -2
Query: 1547 T*CLDILKR*LHSLQVLVIHVWCYXXXXXXXXXLEPRSTYPFYVELALCLDHIIIKRLAL 1368
T CLDILKR HSLQ+LVI + Y L P T YVELAL D+I ++ LA
Sbjct: 309 TCCLDILKRQGHSLQILVIQI*YYLQMLLWLQILRPGCTEALYVELALGFDNIFVQ*LAK 130
Query: 1367 VLHDC 1353
+LH C
Sbjct: 129 ILHRC 115
Score = 61.6 bits (128), Expect(2) = 4e-012
Identities = 31/63 (49%), Positives = 36/63 (57%)
Frame = -1 / -1
Query: 1548 NIMPRYSQKIVAFFASPCHTCLVLPXXXXXXADSGTKKHISLLC*IGSLP*SHHHKAFGS 1369
N++PRYSQK F A+PCHT L+LP AD T+ H LC*IGS * H G
Sbjct: 310 NMLPRYSQKTRTFSANPCHTNLILPADVAVAADFETRLHRGPLC*IGSRL**HLRTVTG* 131
Query: 1368 GSA 1360
SA
Sbjct: 130 DSA 122
Score = 51.9 bits (107), Expect(3) = 6e-033
Identities = 19/35 (54%), Positives = 25/35 (71%)
Frame = +3 / +1
Query: 1251 ENSVFPWTDIGQEKDTRAHLVAELKWPDSFAETTT 1355
E+SVFPWTD+ +K+++ HL ELKWPD T T
Sbjct: 1 ESSVFPWTDLTPDKNSQVHLEEELKWPDLLHGTFT 105
Score = 36.3 bits (73), Expect(2) = 4e-020
Identities = 18/35 (51%), Positives = 24/35 (68%)
Frame = -3 / -3
Query: 1360 MTVVVSAKESGHLSSATR*ALVSFSCPMSVHGKTL 1256
++V V +SGHLSS++R* + S SVHGKTL
Sbjct: 110 VSVNVPWSKSGHLSSSSR*TWLFLSGVKSVHGKTL 6
Score = 32.7 bits (65), Expect(2) = 2e-012
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = -2 / -2
Query: 1334 VRPLKFRY*VSPCIFFLSNVCPWEDT 1257
VRPL+F V+ IF +CPWE+T
Sbjct: 84 VRPLEFFLKVNLAIFIWC*ICPWENT 7
Score = 32.2 bits (64), Expect(2) = 4e-012
Identities = 17/30 (56%), Positives = 19/30 (63%)
Frame = -1 / -1
Query: 1347 FRQRSQAT*VPLLGEPLYLFLVQCLSMGRH 1258
F SQAT*V GE Y +LV LSMG+H
Sbjct: 97 FHGASQAT*VLPQGELGYFYLVLNLSMGKH 8
Score = 30.9 bits (61), Expect(2) = 1e-017
Identities = 17/34 (50%), Positives = 18/34 (52%)
Frame = +2 / +3
Query: 1259 CLPMDRHWTRKRYKGSPSSGT*VA*LLCRNDHSH 1360
C PMDR TR + SP T VA*L N H H
Sbjct: 9 CFPMDRFNTR*K*PSSP*GRTQVA*LAPWNIHGH 110
Score = 24.4 bits (47), Expect(2) = 8e-013
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +1 / +2
Query: 1252 RTVSSHGQTLDKKKIQGLT**RNLSGLT 1335
+ V SHGQ + KI T +N SGLT
Sbjct: 2 KVVFSHGQI*HQIKIAKFTLRKNSSGLT 85
Score = 24.0 bits (46), Expect(3) = 6e-033
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = +3 / +2
Query: 1650 DTEIILHSCSSVEELAISRK 1709
+TEI +CSSV++ A+ K
Sbjct: 434 ETEINTDNCSSVKDTAVHEK 493
>gb|CW368034.1|CW368034 fsbb001f041m19f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f041m19, DNA
sequence
Length = 504
Score = 116 bits (248), Expect(2) = 6e-033
Identities = 43/66 (65%), Positives = 54/66 (81%)
Frame = +3 / +3
Query: 390 GLQRCGKSCRLRWINYLRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEI 569
GL+R GKSCRLRW+NYL+PD+KRG +E+ LI+ELH+ GNRWS+I+ LPGRTDNEI
Sbjct: 300 GLKRTGKSCRLRWLNYLKPDIKRGNLTPEEQLLILELHSKWGNRWSRISHHLPGRTDNEI 479
Query: 570 KNLWNS 587
KN W +
Sbjct: 480 KNYWRT 497
Score = 68.4 bits (143), Expect(2) = 6e-013
Identities = 27/66 (40%), Positives = 42/66 (63%)
Frame = -2 / -2
Query: 587 RVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECPSLEVWPQIVYPPQPTTL 408
R P +LDL++ PPWQ+ + PPV ++L+DE + E +L+V ++V PPQP L
Sbjct: 497 RPPVVLDLVVRPPWQVMRDPGPPVSPLGMELEDEELLLRREVAALDVRLEVVEPPQPAAL 318
Query: 407 SAPLKP 390
+ PL+P
Sbjct: 317 AGPLQP 300
Score = 55.6 bits (115), Expect = 3e-006
Identities = 31/62 (50%), Positives = 32/62 (51%)
Frame = -3 / -3
Query: 574 FLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANAPLLRSGLR*FIHLSLQLFPHL* 395
FLISLSV PG I DHLFP S P L SGLR* HLS QL P L
Sbjct: 484 FLISLSVRPGR*CEILDHLFPHLEWSSRMRSCSSGVRLPRLMSGLR*LSHLSRQLLPVLF 305
Query: 394 SP 389
+P
Sbjct: 304 NP 299
Score = 47.3 bits (97), Expect(2) = 6e-033
Identities = 18/42 (42%), Positives = 27/42 (64%)
Frame = +3 / +1
Query: 288 KLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKS 413
+LR+G W+ EED LMN+I HG G W+ + + +G C +S
Sbjct: 94 ELRRGPWTLEEDNLLMNYIACHGEGRWNLLARCSGEYTCMES 219
Score = 28.1 bits (55), Expect(2) = 6e-013
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = -2 / -1
Query: 380 GNRAPAAMAMLCYVIHEFLILLRGP 306
G PAA+A+ V+HE ++ L+ P
Sbjct: 186 GEEIPAALAVASNVVHEEVVFLKRP 112
>gb|AF474127.1| Sorghum bicolor typical P-type R2R3 Myb protein (Myb20) gene, partial
cds
Length = 2328
Score = 79.4 bits (167), Expect(3) = 1e-032
Identities = 27/49 (55%), Positives = 41/49 (83%)
Frame = +3 / +2
Query: 387 AGLQRCGKSCRLRWINYLRPDLKRGAFAQDEEDLIIELHAVLGNRWSQI 533
AGL+RCGKSCRLRW+NYLRP++K G F+++E+ +I+ L+ +G+R S +
Sbjct: 1823 AGLKRCGKSCRLRWLNYLRPNIKHGGFSEEEDRIILSLYISIGSR*SSV 1969
Score = 60.2 bits (125), Expect(3) = 1e-032
Identities = 23/29 (79%), Positives = 26/29 (89%)
Frame = +3 / +1
Query: 519 RWSQIAAQLPGRTDNEIKNLWNSCIKKKL 605
RWS IAAQLPGRTDN+IKN WN+ +KKKL
Sbjct: 2122 RWSIIAAQLPGRTDNDIKNYWNTRLKKKL 2208
Score = 51.0 bits (105), Expect(3) = 1e-032
Identities = 19/35 (54%), Positives = 25/35 (71%)
Frame = +3 / +1
Query: 258 MGRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHG 362
MGR CC K ++KG WSPEED KL ++I ++G G
Sbjct: 1579 MGRAPCCDKATVKKGPWSPEEDAKLKSYIEQNGTG 1683
Score = 46.4 bits (95), Expect(3) = 9e-012
Identities = 21/29 (72%), Positives = 22/29 (75%)
Frame = -3 / -2
Query: 604 SFFLMHEFHRFLISLSVLPGSCAAI*DHL 518
SFFL F F +SLSVLPGSCAAI DHL
Sbjct: 2207 SFFLSLVFQ*FFMSLSVLPGSCAAIIDHL 2121
Score = 44.1 bits (90), Expect(3) = 9e-012
Identities = 17/43 (39%), Positives = 25/43 (58%)
Frame = -2 / -3
Query: 521 PVPEDSVQLDDEVFFVLGECPSLEVWPQIVYPPQPTTLSAPLK 393
P V+ D F+LGE L+VWP++V PP+ L+ PL+
Sbjct: 1957 PAAYADVEAKDYSVFLLGEPTVLDVWPEVVEPPEAAALATPLQ 1829
Score = 37.7 bits (76), Expect = 0.62
Identities = 16/29 (55%), Positives = 21/29 (72%)
Frame = -2 / -1
Query: 605 QLLLDARVP*ILDLIISPPWQLRCNLRPP 519
+LLL+ RVP +L +I+ PP QLR RPP
Sbjct: 2208 ELLLEPRVPVVLYVIVRPPRQLRRYYRPP 2122
Score = 28.6 bits (56), Expect(3) = 9e-012
Identities = 17/35 (48%), Positives = 19/35 (54%)
Frame = -2 / -1
Query: 362 AMAMLCYVIHEFLILLRGPEPLSQLLLVAARMPPH 258
A A+L V E +LLR P L LVAAR PH
Sbjct: 1683 AGAVLLDVGLELGVLLRRPRTLLHSSLVAARSSPH 1579
>gb|CD226168.1|CD226168 CCC1_44_D06.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_44_D06_A007 3', mRNA sequence
Length = 634
Score = 104 bits (222), Expect(3) = 1e-032
Identities = 45/83 (54%), Positives = 54/83 (65%)
Frame = +3 / +1
Query: 1335 SFAETTTVMQNQSQTLYDDVIKAESQFNIEGICASWFXXXXXXXXXXVAPDMYDKDLQRM 1514
+F +T MQN SQ+LY+DVIKAESQFNIEG+CA+W V D+YD+DLQRM
Sbjct: 97 TFTDTPATMQNLSQSLYEDVIKAESQFNIEGLCAAWSQNLQPQQHLQVVSDLYDRDLQRM 276
Query: 1515 QLSFENI*ALCSTTWNRADQKKQ 1583
LSFENI*A C QK +
Sbjct: 277 SLSFENI*ATCCMQGTEK*QKAE 345
Score = 84.5 bits (178), Expect(2) = 4e-020
Identities = 42/70 (60%), Positives = 46/70 (65%)
Frame = -3 / -3
Query: 1552 VEHNA*IFSKDSCILCKSLSYMSGATXXXXXXX*FWNQEAHIPSMLNWLSALITSS*SVW 1373
++H A*IFSKD ILCKSLSY S T F +Q A PSMLNWLSALITSS S W
Sbjct: 314 MQHVA*IFSKDKDILCKSLSYKSDTTCRCCCGCRF*DQAAQRPSMLNWLSALITSSYSDW 135
Query: 1372 LWFCMTVVVS 1343
L FC+ VS
Sbjct: 134 LRFCIVAGVS 105
Score = 78.0 bits (164), Expect(2) = 1e-016
Identities = 36/65 (55%), Positives = 42/65 (64%)
Frame = +1 / +2
Query: 1354 QSCRTRAKRFMMM*SRQRANST*KGYVLLGSRISSHSNSCR*HQTCMTRTCKECNYLLRI 1533
Q CR A M S+ RANST*+ V G +I SHSN CR*+Q CMT C+EC LLRI
Sbjct: 116 QRCRILASHCTKMLSKPRANST*RASVQPGLKICSHSNICR*YQICMTGICRECPCLLRI 295
Query: 1534 SRHYV 1548
SR +V
Sbjct: 296 SRQHV 310
Score = 71.6 bits (150), Expect(2) = 8e-013
Identities = 33/64 (51%), Positives = 38/64 (59%)
Frame = +2 / +3
Query: 1361 AEPEPNAL**CDQGREPIQHRRDMCFLVPESXXXXXXXGSTRHV*QGLAKNATIF*EYLG 1540
AE P + C Q REPIQHR +C LV +S GS R V*QG A+N +F*EYLG
Sbjct: 123 AES*PVTVRRCYQSREPIQHRGPLCSLVSKSAATATSAGSIRFV*QGFAENVLVF*EYLG 302
Query: 1541 IMFH 1552
M H
Sbjct: 303 NMLH 314
Score = 61.6 bits (128), Expect(2) = 3e-012
Identities = 31/63 (49%), Positives = 36/63 (57%)
Frame = -1 / -1
Query: 1548 NIMPRYSQKIVAFFASPCHTCLVLPXXXXXXADSGTKKHISLLC*IGSLP*SHHHKAFGS 1369
N++PRYSQK F A+PCHT L+LP AD T+ H LC*IGS * H G
Sbjct: 310 NMLPRYSQKTRTFSANPCHTNLILPADVAVAADFETRLHRGPLC*IGSRL**HLRTVTG* 131
Query: 1368 GSA 1360
SA
Sbjct: 130 DSA 122
Score = 58.8 bits (122), Expect(2) = 2e-011
Identities = 31/65 (47%), Positives = 37/65 (56%)
Frame = -2 / -2
Query: 1547 T*CLDILKR*LHSLQVLVIHVWCYXXXXXXXXXLEPRSTYPFYVELALCLDHIIIKRLAL 1368
T CLDILKR HSLQ+ VI + Y L P T YVELAL D+I ++ LA
Sbjct: 309 TCCLDILKRQGHSLQIPVIQI*YYLQMLLWLQILRPGCTEALYVELALGFDNIFVQ*LAK 130
Query: 1367 VLHDC 1353
+LH C
Sbjct: 129 ILHRC 115
Score = 51.9 bits (107), Expect(3) = 1e-032
Identities = 19/35 (54%), Positives = 25/35 (71%)
Frame = +3 / +1
Query: 1251 ENSVFPWTDIGQEKDTRAHLVAELKWPDSFAETTT 1355
E+SVFPWTD+ +K+++ HL ELKWPD T T
Sbjct: 1 ESSVFPWTDLTPDKNSQVHLEEELKWPDLLHGTFT 105
Score = 36.3 bits (73), Expect(2) = 4e-020
Identities = 18/35 (51%), Positives = 24/35 (68%)
Frame = -3 / -3
Query: 1360 MTVVVSAKESGHLSSATR*ALVSFSCPMSVHGKTL 1256
++V V +SGHLSS++R* + S SVHGKTL
Sbjct: 110 VSVNVPWSKSGHLSSSSR*TWLFLSGVKSVHGKTL 6
Score = 32.7 bits (65), Expect(2) = 3e-012
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = -2 / -2
Query: 1334 VRPLKFRY*VSPCIFFLSNVCPWEDT 1257
VRPL+F V+ IF +CPWE+T
Sbjct: 84 VRPLEFFLKVNLAIFIWC*ICPWENT 7
Score = 32.2 bits (64), Expect(2) = 2e-011
Identities = 17/30 (56%), Positives = 19/30 (63%)
Frame = -1 / -1
Query: 1347 FRQRSQAT*VPLLGEPLYLFLVQCLSMGRH 1258
F SQAT*V GE Y +LV LSMG+H
Sbjct: 97 FHGASQAT*VLPQGELGYFYLVLNLSMGKH 8
Score = 30.9 bits (61), Expect(2) = 1e-016
Identities = 17/34 (50%), Positives = 18/34 (52%)
Frame = +2 / +3
Query: 1259 CLPMDRHWTRKRYKGSPSSGT*VA*LLCRNDHSH 1360
C PMDR TR + SP T VA*L N H H
Sbjct: 9 CFPMDRFNTR*K*PSSP*GRTQVA*LAPWNIHGH 110
Score = 24.4 bits (47), Expect(2) = 8e-013
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +1 / +2
Query: 1252 RTVSSHGQTLDKKKIQGLT**RNLSGLT 1335
+ V SHGQ + KI T +N SGLT
Sbjct: 2 KVVFSHGQI*HQIKIAKFTLRKNSSGLT 85
Score = 24.0 bits (46), Expect(3) = 1e-032
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = +3 / +2
Query: 1650 DTEIILHSCSSVEELAISRK 1709
+TEI +CSSV++ A+ K
Sbjct: 434 ETEINTDNCSSVKDTAVHEK 493
>gb|CW480519.1|CW480519 fsbb001f239k04f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f239k04, DNA
sequence
Length = 576
Score = 100 bits (214), Expect(2) = 2e-032
Identities = 39/45 (86%), Positives = 42/45 (93%)
Frame = +3 / +2
Query: 387 AGLQRCGKSCRLRWINYLRPDLKRGAFAQDEEDLIIELHAVLGNR 521
AGLQRCGKSCRLRWINYLRPDLKRG+F+Q EE LI+ELH VLGNR
Sbjct: 20 AGLQRCGKSCRLRWINYLRPDLKRGSFSQQEEALIVELHRVLGNR 154
Score = 64.3 bits (134), Expect(2) = 2e-032
Identities = 24/37 (64%), Positives = 29/37 (78%)
Frame = +3 / +3
Query: 510 LGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGI 620
L +RW+QIA LPGRTDNE+KN WNS IKKKL + +
Sbjct: 405 LQHRWAQIAKHLPGRTDNEVKNFWNSTIKKKLISQAV 515
Score = 57.4 bits (119), Expect(2) = 3e-014
Identities = 24/44 (54%), Positives = 30/44 (68%)
Frame = -2 / -3
Query: 521 PVPEDSVQLDDEVFFVLGECPSLEVWPQIVYPPQPTTLSAPLKP 390
PV + V+LDDE +L E LEV PQ+V PPQP L+APL+P
Sbjct: 154 PVAKHPVELDDEGLLLLREASPLEVRPQVVDPPQPAALAAPLQP 23
Score = 52.8 bits (109), Expect(2) = 8e-008
Identities = 25/47 (53%), Positives = 26/47 (55%)
Frame = -3 / -1
Query: 526 DHLFPRTACXXXXXXXXSWANAPLLRSGLR*FIHLSLQLFPHL*SPA 386
D+L P T PLLRSGLR* IHLSLQL PH SPA
Sbjct: 159 DYLLPSTLWSSTMRASSCCEKLPLLRSGLR*LIHLSLQLLPHRCSPA 19
Score = 46.9 bits (96), Expect(2) = 3e-014
Identities = 20/30 (66%), Positives = 22/30 (73%)
Frame = -3 / -3
Query: 607 LSFFLMHEFHRFLISLSVLPGSCAAI*DHL 518
+SFFLM EF +F SLSVLPG C AI HL
Sbjct: 502 MSFFLMVEFQKFFTSLSVLPGRCLAIWAHL 413
Score = 29.5 bits (58), Expect(2) = 8e-008
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = -2 / -2
Query: 605 QLLLDARVP*ILDLIISPPWQLRCNLRPPV 516
+LLLD VP +L L++ Q+ +L PPV
Sbjct: 500 ELLLDGGVPEVLHLVVGSTRQVLGDLGPPV 411
>gb|CX613908.1|CX613908 GABR1_10_H03.g1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_10_H03_A002 5', mRNA sequence
Length = 823
Score = 127 bits (272), Expect(2) = 3e-032
Identities = 51/81 (62%), Positives = 62/81 (76%)
Frame = +3 / +1
Query: 372 SVPKLAGLQRCGKSCRLRWINYLRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPG 551
SV AGL R GKSCRLRW+NYL P LKRG + EE LI+ELHA GNRWS+IA +LPG
Sbjct: 433 SVSFQAGLNRTGKSCRLRWVNYLHPGLKRGRMSPHEERLILELHARWGNRWSRIARRLPG 612
Query: 552 RTDNEIKNLWNSCIKKKLRQK 614
RTDNEIKN W + ++KK +++
Sbjct: 613 RTDNEIKNYWRTHMRKKAQER 675
Score = 62.0 bits (129), Expect = 3e-008
Identities = 37/78 (47%), Positives = 38/78 (48%)
Frame = -3 / -3
Query: 604 SFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANAPLLRSGLR*FIH 425
+FFLM FLISLSV PG AI DHLFP AC P LR G R*
Sbjct: 665 AFFLMCVLQ*FLISLSVRPGKRRAILDHLFPHRACSSRMRRSSWGDMRPRLRPG*R*LTQ 486
Query: 424 LSLQLFPHL*SPASLGTE 371
S QL P SPA TE
Sbjct: 485 RSRQLLPVRLSPA*KDTE 432
Score = 58.3 bits (121), Expect = 4e-007
Identities = 26/63 (41%), Positives = 36/63 (57%)
Frame = -2 / -2
Query: 581 P*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECPSLEVWPQIVYPPQPTTLSA 402
P +LDLI+S PWQ PPV SVQL DE F+ P+LE ++V P +P L+
Sbjct: 642 PVVLDLIVSAPWQAARYPGPPVSPPSVQLKDEALFMGRHAPTLEARVKVVDPAKPAALAC 463
Query: 401 PLK 393
++
Sbjct: 462 SVE 454
Score = 34.1 bits (68), Expect(2) = 3e-032
Identities = 12/39 (30%), Positives = 24/39 (61%)
Frame = +3 / +3
Query: 282 KQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQ 398
+++ RKG W+ +ED +L+ + G W + K++GL+
Sbjct: 210 REETRKGPWTEQEDLQLVCTVRLFGERRWDFIAKVSGLR 326
>gb|CW487349.1|CW487349 fsbb001f253c15k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f253c15, DNA
sequence
Length = 692
Score = 100 bits (214), Expect(2) = 3e-032
Identities = 39/45 (86%), Positives = 42/45 (93%)
Frame = +3 / +2
Query: 387 AGLQRCGKSCRLRWINYLRPDLKRGAFAQDEEDLIIELHAVLGNR 521
AGLQRCGKSCRLRWINYLRPDLKRG+F+Q EE LI+ELH VLGNR
Sbjct: 23 AGLQRCGKSCRLRWINYLRPDLKRGSFSQQEEALIVELHRVLGNR 157
Score = 64.3 bits (134), Expect(2) = 3e-032
Identities = 24/37 (64%), Positives = 29/37 (78%)
Frame = +3 / +3
Query: 510 LGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGI 620
L +RW+QIA LPGRTDNE+KN WNS IKKKL + +
Sbjct: 408 LQHRWAQIAKHLPGRTDNEVKNFWNSTIKKKLISQAV 518
Score = 57.4 bits (119), Expect(2) = 4e-014
Identities = 24/44 (54%), Positives = 30/44 (68%)
Frame = -2 / -2
Query: 521 PVPEDSVQLDDEVFFVLGECPSLEVWPQIVYPPQPTTLSAPLKP 390
PV + V+LDDE +L E LEV PQ+V PPQP L+APL+P
Sbjct: 157 PVAKHPVELDDEGLLLLREASPLEVRPQVVDPPQPAALAAPLQP 26
Score = 52.8 bits (109), Expect(2) = 1e-007
Identities = 25/47 (53%), Positives = 26/47 (55%)
Frame = -3 / -3
Query: 526 DHLFPRTACXXXXXXXXSWANAPLLRSGLR*FIHLSLQLFPHL*SPA 386
D+L P T PLLRSGLR* IHLSLQL PH SPA
Sbjct: 162 DYLLPSTLWSSTMRASSCCEKLPLLRSGLR*LIHLSLQLLPHRCSPA 22
Score = 46.9 bits (96), Expect(2) = 4e-014
Identities = 20/30 (66%), Positives = 22/30 (73%)
Frame = -3 / -2
Query: 607 LSFFLMHEFHRFLISLSVLPGSCAAI*DHL 518
+SFFLM EF +F SLSVLPG C AI HL
Sbjct: 505 MSFFLMVEFQKFFTSLSVLPGRCLAIWAHL 416
Score = 29.5 bits (58), Expect(2) = 1e-007
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = -2 / -1
Query: 605 QLLLDARVP*ILDLIISPPWQLRCNLRPPV 516
+LLLD VP +L L++ Q+ +L PPV
Sbjct: 503 ELLLDGGVPEVLHLVVGSTRQVLGDLGPPV 414
>gb|CW300014.1|CW300014 104_783_11463423_148_36246_060 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11463423, DNA
sequence
Length = 706
Score = 100 bits (214), Expect(2) = 3e-032
Identities = 39/45 (86%), Positives = 42/45 (93%)
Frame = +3 / +2
Query: 387 AGLQRCGKSCRLRWINYLRPDLKRGAFAQDEEDLIIELHAVLGNR 521
AGLQRCGKSCRLRWINYLRPDLKRG+F+Q EE LI+ELH VLGNR
Sbjct: 59 AGLQRCGKSCRLRWINYLRPDLKRGSFSQQEEALIVELHRVLGNR 193
Score = 64.3 bits (134), Expect(2) = 3e-032
Identities = 24/37 (64%), Positives = 29/37 (78%)
Frame = +3 / +3
Query: 510 LGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGI 620
L +RW+QIA LPGRTDNE+KN WNS IKKKL + +
Sbjct: 444 LQHRWAQIAKHLPGRTDNEVKNFWNSTIKKKLISQAV 554
Score = 57.4 bits (119), Expect(2) = 4e-014
Identities = 24/44 (54%), Positives = 30/44 (68%)
Frame = -2 / -1
Query: 521 PVPEDSVQLDDEVFFVLGECPSLEVWPQIVYPPQPTTLSAPLKP 390
PV + V+LDDE +L E LEV PQ+V PPQP L+APL+P
Sbjct: 193 PVAKHPVELDDEGLLLLREASPLEVRPQVVDPPQPAALAAPLQP 62
Score = 52.8 bits (109), Expect(2) = 1e-007
Identities = 25/47 (53%), Positives = 26/47 (55%)
Frame = -3 / -2
Query: 526 DHLFPRTACXXXXXXXXSWANAPLLRSGLR*FIHLSLQLFPHL*SPA 386
D+L P T PLLRSGLR* IHLSLQL PH SPA
Sbjct: 198 DYLLPSTLWSSTMRASSCCEKLPLLRSGLR*LIHLSLQLLPHRCSPA 58
Score = 46.9 bits (96), Expect(2) = 4e-014
Identities = 20/30 (66%), Positives = 22/30 (73%)
Frame = -3 / -1
Query: 607 LSFFLMHEFHRFLISLSVLPGSCAAI*DHL 518
+SFFLM EF +F SLSVLPG C AI HL
Sbjct: 541 MSFFLMVEFQKFFTSLSVLPGRCLAIWAHL 452
Score = 29.5 bits (58), Expect(2) = 1e-007
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = -2 / -3
Query: 605 QLLLDARVP*ILDLIISPPWQLRCNLRPPV 516
+LLLD VP +L L++ Q+ +L PPV
Sbjct: 539 ELLLDGGVPEVLHLVVGSTRQVLGDLGPPV 450
>gb|CW491261.1|CW491261 fsbb001f281a22k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f281a22, DNA
sequence
Length = 735
Score = 140 bits (301), Expect = 6e-032
Identities = 52/78 (66%), Positives = 59/78 (75%)
Frame = +3 / +2
Query: 258 MGRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINY 437
MGR CC K KG W+ EED++L+ +I HG GCW S+PK AGL RCGKSCRLRWINY
Sbjct: 500 MGRSPCCEKAHTNKGAWTKEEDDRLVAYIRAHGEGCWRSLPKAAGLMRCGKSCRLRWINY 679
Query: 438 LRPDLKRGAFAQDEEDLI 491
LRPDLKRG F DE+DLI
Sbjct: 680 LRPDLKRGNFTADEDDLI 733
Score = 68.9 bits (144), Expect = 3e-010
Identities = 32/78 (41%), Positives = 45/78 (57%)
Frame = -2 / -3
Query: 491 DEVFFVLGECPSLEVWPQIVYPPQPTTLSAPLKPSEFGNRAPAAMAMLCYVIHEFLILLR 312
DEV V GE +LEV ++V P + L+A + G R PA A+ V H+ ++LL
Sbjct: 733 DEVVLVGGEVAALEVGAEVVDPAEAAALAAAHQSGRLGQRPPAPFAVRADVRHQAVVLLL 554
Query: 311 GPEPLSQLLLVAARMPPH 258
GP L ++ L+AAR PPH
Sbjct: 553 GPRALVRVRLLAARRPPH 500
Score = 43.7 bits (89), Expect = 0.010
Identities = 20/37 (54%), Positives = 23/37 (62%)
Frame = -3 / -1
Query: 460 PLLRSGLR*FIHLSLQLFPHL*SPASLGTELQQPWPC 350
P LRSG R* I QL P SPA+LG++ Q P PC
Sbjct: 702 PRLRSGRR*LIQRRRQLLPQRISPAALGSDRQHPSPC 592
>gb|CD213181.1|CD213181 HS1_29_B09.b1_A012 Heat-shocked seedlings Sorghum bicolor cDNA clone
HS1_29_B09_A012 3', mRNA sequence
Length = 520
Score = 109 bits (232), Expect(3) = 7e-032
Identities = 47/83 (56%), Positives = 55/83 (66%)
Frame = +3 / +3
Query: 1335 SFAETTTVMQNQSQTLYDDVIKAESQFNIEGICASWFXXXXXXXXXXVAPDMYDKDLQRM 1514
+F +T MQN SQ+LY+DVIKAESQFNIEG+CA+WF V D+YDKDLQRM
Sbjct: 96 TFTDTPATMQNFSQSLYEDVIKAESQFNIEGLCAAWFQNLQPQQHLQVVSDLYDKDLQRM 275
Query: 1515 QLSFENI*ALCSTTWNRADQKKQ 1583
LSFENI*A C QK +
Sbjct: 276 SLSFENI*ATCCMQGTEK*QKAE 344
Score = 86.8 bits (183), Expect(2) = 4e-020
Identities = 43/70 (61%), Positives = 46/70 (65%)
Frame = -3 / -1
Query: 1552 VEHNA*IFSKDSCILCKSLSYMSGATXXXXXXX*FWNQEAHIPSMLNWLSALITSS*SVW 1373
++H A*IFSKD ILCKSLSY S T F NQ A PSMLNWLSALITSS S W
Sbjct: 313 MQHVA*IFSKDKDILCKSLSYKSDTTCKCCCGCKF*NQAAQRPSMLNWLSALITSSYSDW 134
Query: 1372 LWFCMTVVVS 1343
L FC+ VS
Sbjct: 133 LKFCIVAGVS 104
Score = 78.5 bits (165), Expect(2) = 9e-017
Identities = 36/65 (55%), Positives = 42/65 (64%)
Frame = +1 / +1
Query: 1354 QSCRTRAKRFMMM*SRQRANST*KGYVLLGSRISSHSNSCR*HQTCMTRTCKECNYLLRI 1533
Q CR A M S+ RANST*+ V G +I SHSN CR*+Q CMTR C+EC LLRI
Sbjct: 115 QRCRILASHCTKMLSKPRANST*RASVQPGFKICSHSNICR*YQICMTRICRECPCLLRI 294
Query: 1534 SRHYV 1548
R +V
Sbjct: 295 FRQHV 309
Score = 68.0 bits (142), Expect = 5e-010
Identities = 29/54 (53%), Positives = 33/54 (61%)
Frame = +2 / +2
Query: 1391 CDQGREPIQHRRDMCFLVPESXXXXXXXGSTRHV*QGLAKNATIF*EYLGIMFH 1552
C Q REPIQHR +C LV + GS R V*QG A+N +F*EYLG M H
Sbjct: 152 CYQSREPIQHRGPLCSLVSKFAATATFAGSIRFV*QGFAENVLVF*EYLGNMLH 313
Score = 60.2 bits (125), Expect(2) = 1e-011
Identities = 31/65 (47%), Positives = 39/65 (60%)
Frame = -2 / -3
Query: 1547 T*CLDILKR*LHSLQVLVIHVWCYXXXXXXXXXLEPRSTYPFYVELALCLDHIIIKRLAL 1368
T CL+ILKR HSLQ+LVI + Y L+P T YVELAL D+I ++ LA
Sbjct: 308 TCCLNILKRQGHSLQILVIQI*YYLQMLLWLQILKPGCTEALYVELALGFDNIFVQ*LAK 129
Query: 1367 VLHDC 1353
+LH C
Sbjct: 128 ILHRC 114
Score = 58.3 bits (121), Expect(2) = 2e-010
Identities = 29/63 (46%), Positives = 36/63 (57%)
Frame = -1 / -2
Query: 1548 NIMPRYSQKIVAFFASPCHTCLVLPXXXXXXADSGTKKHISLLC*IGSLP*SHHHKAFGS 1369
N++P+YSQK F A+PCHT L+LP A+ T+ H LC*IGS * H G
Sbjct: 309 NMLPKYSQKTRTFSANPCHTNLILPANVAVAANFETRLHRGPLC*IGSRL**HLRTVTG* 130
Query: 1368 GSA 1360
SA
Sbjct: 129 NSA 121
Score = 45.1 bits (92), Expect(3) = 7e-032
Identities = 17/34 (50%), Positives = 23/34 (67%)
Frame = +3 / +3
Query: 1254 NSVFPWTDIGQEKDTRAHLVAELKWPDSFAETTT 1355
+SVFPWTD+ +K+++ L ELKWPD T T
Sbjct: 3 SSVFPWTDLTPDKNSQVPLEEELKWPDLLHGTFT 104
Score = 34.1 bits (68), Expect(2) = 4e-020
Identities = 17/35 (48%), Positives = 23/35 (65%)
Frame = -3 / -1
Query: 1360 MTVVVSAKESGHLSSATR*ALVSFSCPMSVHGKTL 1256
++V V +SGHLSS++R + S SVHGKTL
Sbjct: 109 VSVNVPWSKSGHLSSSSRGTWLFLSGVKSVHGKTL 5
Score = 32.2 bits (64), Expect(2) = 1e-011
Identities = 17/30 (56%), Positives = 19/30 (63%)
Frame = -1 / -2
Query: 1347 FRQRSQAT*VPLLGEPLYLFLVQCLSMGRH 1258
F SQAT*V GE Y +LV LSMG+H
Sbjct: 96 FHGASQAT*VLPQGELGYFYLVLNLSMGKH 7
Score = 30.9 bits (61), Expect(2) = 9e-017
Identities = 17/34 (50%), Positives = 18/34 (52%)
Frame = +2 / +2
Query: 1259 CLPMDRHWTRKRYKGSPSSGT*VA*LLCRNDHSH 1360
C PMDR TR + SP T VA*L N H H
Sbjct: 8 CFPMDRFNTR*K*PSSP*GRTQVA*LAPWNIHGH 109
Score = 29.5 bits (58), Expect(2) = 2e-010
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = -2 / -3
Query: 1334 VRPLKFRY*VSPCIFFLSNVCPWEDT 1257
VRPL+F + IF +CPWE+T
Sbjct: 83 VRPLEFFLKGNLAIFIWC*ICPWENT 6
Score = 24.0 bits (46), Expect(3) = 7e-032
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = +3 / +1
Query: 1650 DTEIILHSCSSVEELAISRK 1709
+TEI +CSSV++ A+ K
Sbjct: 433 ETEINTDNCSSVKDTAVHEK 492
>gb|CD232590.1|CD232590 SS1_46_D12.g1_A012 Salt-stressed seedlings Sorghum bicolor cDNA
clone SS1_46_D12_A012 5', mRNA sequence
Length = 634
Score = 125 bits (268), Expect(2) = 8e-032
Identities = 49/76 (64%), Positives = 59/76 (77%)
Frame = +3 / +2
Query: 387 AGLQRCGKSCRLRWINYLRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNE 566
AGL R GKSCRLRW+NYL P LK G + EE LIIELHA GNRWS+IA +LPGRTDNE
Sbjct: 272 AGLNRTGKSCRLRWVNYLHPGLKHGRMSPQEERLIIELHARWGNRWSRIARRLPGRTDNE 451
Query: 567 IKNLWNSCIKKKLRQK 614
IKN W + ++KK +++
Sbjct: 452 IKNYWRTHMRKKAQER 499
Score = 68.0 bits (142), Expect = 5e-010
Identities = 26/63 (41%), Positives = 40/63 (63%)
Frame = -2 / -1
Query: 581 P*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECPSLEVWPQIVYPPQPTTLSA 402
P +LDL++ PWQ C RPPVP S++L+++ FF+ LE ++V+PPQ LS
Sbjct: 466 PVVLDLVVCTPWQPPCYPRPPVPPPSMELNNKAFFLW*HAAMLEARMKVVHPPQAAALSC 287
Query: 401 PLK 393
P++
Sbjct: 286 PVE 278
Score = 66.1 bits (138), Expect = 2e-009
Identities = 37/73 (50%), Positives = 38/73 (52%)
Frame = -3 / -2
Query: 604 SFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANAPLLRSGLR*FIH 425
+FFLM FLISLSV PGS AI DHLFP A P LR G R*F H
Sbjct: 489 AFFLMCVLQ*FLISLSVRPGSLRAILDHLFPHRAWSSIIRRSSCGDMRPCLRPG*R*FTH 310
Query: 424 LSLQLFPHL*SPA 386
QLFP L PA
Sbjct: 309 RRRQLFPVLLRPA 271
Score = 34.5 bits (69), Expect(2) = 8e-032
Identities = 12/46 (26%), Positives = 27/46 (58%)
Frame = +3 / +2
Query: 261 GRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQ 398
G + ++++RKG W+ +ED +L+ + G W + +++GL+
Sbjct: 20 GSNMVTVREEMRKGPWTEQEDMQLVCTVRLFGDRRWDFIAQVSGLR 157
>gb|CW041655.1|CW041655 104_275_10506672_114_30284 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10506672, DNA
sequence
Length = 704
Score = 79.9 bits (168), Expect(3) = 1e-031
Identities = 31/44 (70%), Positives = 34/44 (77%)
Frame = +3 / -2
Query: 390 GLQRCGKSCRLRWINYLRPDLKRGAFAQDEEDLIIELHAVLGNR 521
GL RC KSCRLRW NYLRP +KRG F+ EE LII L A+LGNR
Sbjct: 349 GLMRCSKSCRLRWTNYLRPGIKRGNFSDQEEKLIIHLQALLGNR 218
Score = 57.9 bits (120), Expect(3) = 1e-031
Identities = 21/45 (46%), Positives = 29/45 (64%)
Frame = +3 / -3
Query: 258 MGRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAG 392
MGR CC K ++KG W+PEED L++++ HG G W +VP G
Sbjct: 615 MGRPPCCEKGGVKKGPWTPEEDLVLVSYVQDHGPGNWRAVPTSTG 481
Score = 49.2 bits (101), Expect(3) = 7e-012
Identities = 18/44 (40%), Positives = 30/44 (68%)
Frame = -2 / +2
Query: 521 PVPEDSVQLDDEVFFVLGECPSLEVWPQIVYPPQPTTLSAPLKP 390
PVPE +++DDE+ F++ E +L+ +IV PP+P L+A +P
Sbjct: 218 PVPEQRLEVDDELLFLVAEVAALDARAEIVGPPEPAALAASHQP 349
Score = 46.0 bits (94), Expect(3) = 1e-031
Identities = 15/27 (55%), Positives = 23/27 (85%)
Frame = +3 / -2
Query: 519 RWSQIAAQLPGRTDNEIKNLWNSCIKK 599
RW++IA+ +P RTDN+IKN W++ +KK
Sbjct: 82 RWAEIASYMPERTDNDIKNYWSAHLKK 2
Score = 39.6 bits (80), Expect(3) = 7e-012
Identities = 18/41 (43%), Positives = 25/41 (60%)
Frame = -2 / +1
Query: 380 GNRAPAAMAMLCYVIHEFLILLRGPEPLSQLLLVAARMPPH 258
G+ AP A++ ++ E +LLR P PL L+AAR PPH
Sbjct: 493 GHGAPVPGAVVLHIGDEHEVLLRRPWPLLHPTLLAARWPPH 615
Score = 27.2 bits (53), Expect(3) = 7e-012
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = -2 / +2
Query: 596 LDARVP*ILDLIISPPWQLRCNLRPP 519
L+ P +LD+++ P +R +LRPP
Sbjct: 5 LEVCAPVVLDVVVCPLRHVRRDLRPP 82
>gb|CW364998.1|CW364998 fsbb001f037f01k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f037f01, DNA
sequence
Length = 638
Score = 90.4 bits (191), Expect(2) = 1e-031
Identities = 35/45 (77%), Positives = 38/45 (84%)
Frame = +3 / +3
Query: 387 AGLQRCGKSCRLRWINYLRPDLKRGAFAQDEEDLIIELHAVLGNR 521
AGL RCGKSCRLRW NYLRPDLKRG + DEE L+I+LHA LGNR
Sbjct: 402 AGLLRCGKSCRLRWTNYLRPDLKRGLLSDDEERLVIDLHAQLGNR 536
Score = 72.5 bits (152), Expect(2) = 1e-031
Identities = 26/46 (56%), Positives = 32/46 (69%)
Frame = +3 / +1
Query: 255 EMGRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAG 392
EMGR CC K ++KG W+ EED+KL+ + HGH CW VPKLAG
Sbjct: 97 EMGRQPCCDKVGMKKGPWTAEEDQKLVGFLLTHGHCCWRVVPKLAG 234
Score = 62.5 bits (130), Expect(2) = 6e-016
Identities = 28/57 (49%), Positives = 34/57 (59%)
Frame = -2 / -1
Query: 539 RCNLRPPVPEDSVQLDDEVFFVLGECPSLEVWPQIVYPPQPTTLSAPLKPSEFGNRA 369
R + PVPE VQ+DDE V+GE LEV PQ+V PPQP L AP +P + A
Sbjct: 554 RISQHAPVPELRVQVDDEPLLVVGEEAPLEVGPQVVGPPQPAALPAPQQPCSSSSHA 384
Score = 60.2 bits (125), Expect(3) = 1e-012
Identities = 27/47 (57%), Positives = 29/47 (61%)
Frame = -3 / -2
Query: 523 HLFPRTACXXXXXXXXSWANAPLLRSGLR*FIHLSLQLFPHL*SPAS 383
HLFP AC S P LRSGLR* +H SLQLFPHL SPA+
Sbjct: 538 HLFPSCACRSMTSRSSSSERRPRLRSGLR*LVHRSLQLFPHLSSPAA 398
Score = 47.8 bits (98), Expect(2) = 6e-016
Identities = 23/45 (51%), Positives = 29/45 (64%)
Frame = -2 / -3
Query: 386 EFGNRAPAAMAMLCYVIHEFLILLRGPEPLSQLLLVAARMPPHLN 252
E G+ APAA+A+ E L+LLR P L LVAAR+PPHL+
Sbjct: 228 ELGDDAPAAVAVGEEEADELLVLLRRPRALLHAHLVAARLPPHLS 94
Score = 39.1 bits (79), Expect = 0.24
Identities = 21/44 (47%), Positives = 25/44 (56%)
Frame = +1 / +2
Query: 256 RWGGILAATSRS*ERGSGPLRRMRNS*IT*QSMAMAAGALFPNS 387
RWGG AAT +* R G RR R+S + A AAGA P+S
Sbjct: 98 RWGGSRAATRWA*RRARGRRRRTRSSSASSSPTATAAGASSPSS 229
Score = 29.5 bits (58), Expect(3) = 1e-012
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = -3 / -1
Query: 394 SPASLGTELQQPWP 353
SPASLGT QQ WP
Sbjct: 236 SPASLGTTRQQQWP 195
Score = 28.6 bits (56), Expect(3) = 1e-012
Identities = 15/45 (33%), Positives = 20/45 (44%)
Frame = -1 / -2
Query: 327 SHPPQGTRAPFSASACSSKNASPSQRNAEPGSSNQTHRAYRSAEC 193
S PP + P S C S ASPS R ++ + SA+C
Sbjct: 169 SGPPPPSTGPSSCPPCRSTAASPSLRRGMAAAACLSLFQVSSAQC 35
>gb|CW128322.1|CW128322 104_509_11113940_116_34745_066 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11113940, DNA
sequence
Length = 584
Score = 99.1 bits (210), Expect(2) = 2e-031
Identities = 37/44 (84%), Positives = 41/44 (93%)
Frame = +3 / +2
Query: 390 GLQRCGKSCRLRWINYLRPDLKRGAFAQDEEDLIIELHAVLGNR 521
GL+RCGKSCRLRWINYLRPDLKRG+F+Q EEDLII LH +LGNR
Sbjct: 131 GLERCGKSCRLRWINYLRPDLKRGSFSQQEEDLIISLHKILGNR 262
Score = 63.4 bits (132), Expect(2) = 2e-031
Identities = 23/25 (92%), Positives = 24/25 (96%)
Frame = +3 / +2
Query: 519 RWSQIAAQLPGRTDNEIKNLWNSCI 593
RWSQIA+QLPGRTDNEIKN WNSCI
Sbjct: 509 RWSQIASQLPGRTDNEIKNFWNSCI 583
Score = 51.5 bits (106), Expect(2) = 5e-013
Identities = 23/46 (50%), Positives = 25/46 (54%)
Frame = -3 / -3
Query: 526 DHLFPRTACXXXXXXXXSWANAPLLRSGLR*FIHLSLQLFPHL*SP 389
++L P W PLLRSGLR* IHLSLQL PHL P
Sbjct: 267 NYLLPSILWRLMMRSSSCWEKLPLLRSGLR*LIHLSLQLLPHLSKP 130
Score = 48.7 bits (100), Expect(2) = 5e-013
Identities = 20/25 (80%), Positives = 21/25 (84%)
Frame = -3 / -3
Query: 592 MHEFHRFLISLSVLPGSCAAI*DHL 518
MHEF +FLISLSV PGSC AI DHL
Sbjct: 582 MHEFQKFLISLSVRPGSCDAIWDHL 508
Score = 47.3 bits (97), Expect(2) = 6e-010
Identities = 21/43 (48%), Positives = 27/43 (62%)
Frame = -2 / -2
Query: 521 PVPEDSVQLDDEVFFVLGECPSLEVWPQIVYPPQPTTLSAPLK 393
PV V+ DDE+ +LGE LEV PQ+V P QP L+A L+
Sbjct: 262 PVA*YLVEADDEILLLLGEAAPLEVRPQVVDPSQPAALAASLQ 134
Score = 42.3 bits (86), Expect(2) = 6e-010
Identities = 15/25 (60%), Positives = 20/25 (80%)
Frame = -2 / -2
Query: 593 DARVP*ILDLIISPPWQLRCNLRPP 519
DARVP + +L++ PP QLRC+L PP
Sbjct: 583 DARVPEVFNLVVRPPRQLRCDLGPP 509
>gb|CW172247.1|CW172247 104_583_11156182_148_36535_089 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11156182, DNA
sequence
Length = 660
Score = 119 bits (254), Expect(2) = 2e-031
Identities = 46/74 (62%), Positives = 58/74 (78%)
Frame = +3 / +3
Query: 390 GLQRCGKSCRLRWINYLRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEI 569
GL R GKSCRLRW+NYLRP ++RG+ E+ +I ELHA GN+WS+I+ QLPGRTDNEI
Sbjct: 369 GLNRNGKSCRLRWLNYLRPGVRRGSITAGEDTVIRELHARWGNKWSKISKQLPGRTDNEI 548
Query: 570 KNLWNSCIKKKLRQ 611
KN W + I+KK +Q
Sbjct: 549 KNYWRTRIQKKKKQ 590
Score = 63.4 bits (132), Expect = 1e-008
Identities = 34/74 (45%), Positives = 35/74 (47%)
Frame = -3 / -3
Query: 610 CLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANAPLLRSGLR*F 431
C FF + FLISLSV PGSC I DHLFP A P L G R*
Sbjct: 589 CFFFFWILVLQ*FLISLSVRPGSCLEILDHLFPHLAWSSRITVSSPAVMLPRLTPGRR*L 410
Query: 430 IHLSLQLFPHL*SP 389
H SLQL P L P
Sbjct: 409 SHRSLQLLPFLFRP 368
Score = 59.3 bits (123), Expect = 2e-007
Identities = 26/70 (37%), Positives = 38/70 (54%)
Frame = -2 / -2
Query: 602 LLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECPSLEVWPQIVYPP 423
LLLD P +LDL++ P +L +L P VP V+L D + WP++V PP
Sbjct: 581 LLLDPGPPVVLDLVVGPAGELLGDLGPLVPPPRVELPDHRVLPRRDAAPPHPWPKVVEPP 402
Query: 422 QPTTLSAPLK 393
QP L+ P++
Sbjct: 401 QPAALAVPVQ 372
Score = 43.2 bits (88), Expect(2) = 2e-031
Identities = 15/34 (44%), Positives = 25/34 (73%)
Frame = +3 / +1
Query: 291 LRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAG 392
+RKG W+ EED L+++I++HG G W ++ + AG
Sbjct: 115 VRKGPWTLEEDLILVSYISQHGEGSWDNLARSAG 216
>gb|CN129844.1|CN129844 RHOH1_37_F10.g1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_37_F10_A002 5', mRNA sequence
Length = 793
Score = 124 bits (265), Expect(2) = 2e-031
Identities = 48/76 (63%), Positives = 59/76 (77%)
Frame = +3 / +2
Query: 387 AGLQRCGKSCRLRWINYLRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNE 566
AGL R G+SCRLRW+NYL P LK G + EE LIIELHA GNRWS+IA +LPGRTDNE
Sbjct: 428 AGLNRTGRSCRLRWVNYLHPGLKHGRMSPQEERLIIELHARWGNRWSRIARRLPGRTDNE 607
Query: 567 IKNLWNSCIKKKLRQK 614
IKN W + ++KK +++
Sbjct: 608 IKNYWRTHMRKKAQER 655
Score = 64.8 bits (135), Expect = 5e-009
Identities = 25/63 (39%), Positives = 39/63 (61%)
Frame = -2 / -1
Query: 581 P*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECPSLEVWPQIVYPPQPTTLSA 402
P +LDL++ PWQ C RPPVP S++L+++ FF+ LE ++V+PPQ S
Sbjct: 622 PVVLDLVVCTPWQPPCYPRPPVPPPSMELNNKAFFLW*HAAMLEARMKVVHPPQAAAPSC 443
Query: 401 PLK 393
P++
Sbjct: 442 PVE 434
Score = 63.4 bits (132), Expect = 1e-008
Identities = 36/73 (49%), Positives = 37/73 (50%)
Frame = -3 / -2
Query: 604 SFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANAPLLRSGLR*FIH 425
+FFLM FLISLSV PGS AI DHLFP A P LR G R*F H
Sbjct: 645 AFFLMCVLQ*FLISLSVRPGSLRAILDHLFPHRAWSSIIRRSSCGDMRPCLRPG*R*FTH 466
Query: 424 LSLQLFPHL*SPA 386
QL P L PA
Sbjct: 465 RRRQLLPVLLRPA 427
Score = 34.5 bits (69), Expect(2) = 2e-031
Identities = 12/46 (26%), Positives = 27/46 (58%)
Frame = +3 / +2
Query: 261 GRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQ 398
G + ++++RKG W+ +ED +L+ + G W + +++GL+
Sbjct: 176 GSNMVTVREEMRKGPWTEQEDMQLVCTVRLFGDRRWDFIAQVSGLR 313
>gb|CL179208.1|CL179208 104_388_10895151_148_31909_063 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10895151, DNA
sequence
Length = 696
Score = 92.3 bits (195), Expect(2) = 2e-031
Identities = 35/45 (77%), Positives = 39/45 (86%)
Frame = +3 / -2
Query: 387 AGLQRCGKSCRLRWINYLRPDLKRGAFAQDEEDLIIELHAVLGNR 521
AGLQRCGKSCRLRW NYLRPD+KRG F+ EE II+LHA+LGNR
Sbjct: 488 AGLQRCGKSCRLRWTNYLRPDIKRGKFSLQEEQTIIQLHALLGNR 354
Score = 66.6 bits (139), Expect(2) = 2e-031
Identities = 24/45 (53%), Positives = 31/45 (68%)
Frame = +3 / -1
Query: 258 MGRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAG 392
MG CC K L+KG W+PEED+KL+ I +HGHG W ++P AG
Sbjct: 693 MGGSPCCEKIGLKKGPWTPEEDQKLLAFIEEHGHGSWRALPAKAG 559
Score = 48.7 bits (100), Expect(3) = 1e-005
Identities = 20/27 (74%), Positives = 22/27 (81%)
Frame = -3 / +1
Query: 466 NAPLLRSGLR*FIHLSLQLFPHL*SPA 386
N PLL SGLR*F+HL+LQL PHL PA
Sbjct: 409 NLPLLMSGLR*FVHLNLQLLPHLCKPA 489
Score = 45.1 bits (92), Expect = 0.004
Identities = 19/43 (44%), Positives = 27/43 (62%)
Frame = -2 / +3
Query: 521 PVPEDSVQLDDEVFFVLGECPSLEVWPQIVYPPQPTTLSAPLK 393
PV S++LDD + F+ E L+V PQ+V PPQ L+ PL+
Sbjct: 354 PVA*KSMKLDDGLLFLQAELAPLDVRPQVVCPPQSAALTTPLQ 482
Score = 23.5 bits (45), Expect(3) = 1e-005
Identities = 10/26 (38%), Positives = 13/26 (50%)
Frame = -1 / +3
Query: 1839 QKLKYAKVQSCTEGKHQFSRERKGDS 1762
QKL Y + G+ Q R R+G S
Sbjct: 159 QKLTYMLCKLSLNGRQQSDRNRRGTS 236
Score = 22.1 bits (42), Expect(3) = 1e-005
Identities = 13/38 (34%), Positives = 18/38 (47%)
Frame = -2 / +1
Query: 371 APAAMAMLCYVIHEFLILLRGPEPLSQLLLVAARMPPH 258
+P M++L + LIL R P Q L+ A PH
Sbjct: 580 SPTPMSVLLNEGKQLLILFRRPWTFLQSNLLTAW*SPH 693
>gb|CX622870.1|CX622870 GABR1_66_A07.g1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_66_A07_A002 5', mRNA sequence
Length = 675
Score = 124 bits (266), Expect(2) = 2e-031
Identities = 48/75 (64%), Positives = 59/75 (78%)
Frame = +3 / +1
Query: 390 GLQRCGKSCRLRWINYLRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEI 569
GL R GKSCRLRW+NYL P LKRG + EE LI+ELHA GNRWS+IA +LPGRTDNEI
Sbjct: 346 GLNRTGKSCRLRWVNYLHPGLKRGRMSPHEERLILELHARWGNRWSRIARRLPGRTDNEI 525
Query: 570 KNLWNSCIKKKLRQK 614
KN W + ++KK +++
Sbjct: 526 KNYWRTHMRKKAQER 570
Score = 58.8 bits (122), Expect = 3e-007
Identities = 34/72 (47%), Positives = 35/72 (48%)
Frame = -3 / -2
Query: 604 SFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANAPLLRSGLR*FIH 425
+FFLM FLISLSV PG AI DHLFP AC P LR G R*
Sbjct: 560 AFFLMCVLQ*FLISLSVRPGKRRAILDHLFPHRACSSRMRRSSWGDMRPRLRPG*R*LTQ 381
Query: 424 LSLQLFPHL*SP 389
S QL P SP
Sbjct: 380 RSRQLLPVRLSP 345
Score = 58.3 bits (121), Expect = 4e-007
Identities = 26/63 (41%), Positives = 36/63 (57%)
Frame = -2 / -1
Query: 581 P*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECPSLEVWPQIVYPPQPTTLSA 402
P +LDLI+S PWQ PPV SVQL DE F+ P+LE ++V P +P L+
Sbjct: 537 PVVLDLIVSAPWQAARYPGPPVSPPSVQLKDEALFMGRHAPTLEARVKVVDPAKPAALAC 358
Query: 401 PLK 393
++
Sbjct: 357 SVE 349
Score = 34.1 bits (68), Expect(2) = 2e-031
Identities = 12/39 (30%), Positives = 24/39 (61%)
Frame = +3 / +3
Query: 282 KQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQ 398
+++ RKG W+ +ED +L+ + G W + K++GL+
Sbjct: 210 REETRKGPWTEQEDLQLVCTVRLFGERRWDFIAKVSGLR 326
>gb|CW308697.1|CW308697 104_797_11468806_116_35720_091 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11468806, DNA
sequence
Length = 625
Score = 94.5 bits (200), Expect(2) = 4e-031
Identities = 35/47 (74%), Positives = 39/47 (82%)
Frame = +3 / -3
Query: 384 LAGLQRCGKSCRLRWINYLRPDLKRGAFAQDEEDLIIELHAVLGNRW 524
+AGLQRCGKSCRLRW NYLRPDLK G F EE II+LH+V+GNRW
Sbjct: 143 MAGLQRCGKSCRLRWTNYLRPDLKHGEFTDAEEQTIIKLHSVVGNRW 3
Score = 63.4 bits (132), Expect(2) = 4e-031
Identities = 22/45 (48%), Positives = 32/45 (71%)
Frame = +3 / -1
Query: 258 MGRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAG 392
MGR CC K +++G W+PEED KL+++IT++G W +PK AG
Sbjct: 376 MGRIPCCEKDSVKRGQWTPEEDNKLLSYITQYGTRNWRLIPKNAG 242
Score = 55.1 bits (114), Expect(2) = 9e-012
Identities = 23/44 (52%), Positives = 29/44 (65%)
Frame = -2 / +3
Query: 524 PPVPEDSVQLDDEVFFVLGECPSLEVWPQIVYPPQPTTLSAPLK 393
PPV +D VQLDD + + E LEV PQ+V PP+P L APL+
Sbjct: 3 PPVADDGVQLDDGLLLGVRELAVLEVRPQVVGPPEPAALPAPLQ 134
Score = 53.8 bits (111), Expect = 9e-006
Identities = 23/47 (48%), Positives = 27/47 (57%)
Frame = -3 / +1
Query: 526 DHLFPRTACXXXXXXXXSWANAPLLRSGLR*FIHLSLQLFPHL*SPA 386
DHL P T C + N+P LRSG R* +H S QLFPH +PA
Sbjct: 1 DHLLPTTECSLMMVCSSASVNSPCLRSGRR*LVHRSRQLFPHRCNPA 141
Score = 37.3 bits (75), Expect(2) = 9e-012
Identities = 17/41 (41%), Positives = 24/41 (58%)
Frame = -2 / +2
Query: 380 GNRAPAAMAMLCYVIHEFLILLRGPEPLSQLLLVAARMPPH 258
G+ AP A+L V + ++LL P P +L+AAR PPH
Sbjct: 254 GDEAPVTRAVLGDVGEQLVVLLGRPLPALDAVLLAARDPPH 376
>gb|CD233716.1|CD233716 SS1_3_E01.g1_A012 Salt-stressed seedlings Sorghum bicolor cDNA
clone SS1_3_E01_A012 5', mRNA sequence
Length = 654
Score = 120 bits (256), Expect(2) = 7e-031
Identities = 47/82 (57%), Positives = 60/82 (73%)
Frame = +3 / +3
Query: 393 LQRCGKSCRLRWINYLRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIK 572
L+R GKSCRLRW+NYLRPDL+RG E+ LI+ELH+ GNRWS+IA LPGRTD EIK
Sbjct: 324 LKRTGKSCRLRWLNYLRPDLRRGNITPQEQLLILELHSRWGNRWSKIAQHLPGRTDXEIK 503
Query: 573 NLWNSCIKKKLRQKGIDPNTHK 638
N W + ++K +Q D N+ +
Sbjct: 504 NYWRTRVQKHAKQLKCDVNSQQ 569
Score = 54.7 bits (113), Expect = 5e-006
Identities = 30/77 (38%), Positives = 33/77 (42%)
Frame = -3 / -3
Query: 634 WVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANAPL 455
W+L S CL+ F FLIS SV PG C AI D P+ C P
Sbjct: 565 WLLTSHLSCLACFCTRVRQ*FLISXSVRPGRCCAILDQRLPQRECSSRMSSCSCGVMLPR 386
Query: 454 LRSGLR*FIHLSLQLFP 404
RSG R* H QL P
Sbjct: 385 RRSGRR*LSHRRRQLLP 335
Score = 53.3 bits (110), Expect = 1e-005
Identities = 27/82 (32%), Positives = 45/82 (54%)
Frame = -2 / -2
Query: 638 LVGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECP 459
L+ V + L +LL AR P +LDL++ P ++ +L P V VQL DE + +
Sbjct: 569 LLAVDVALELLGVLLHARAPVVLDLVVGAPREVLRDLGPAVAPARVQLQDEQLLLRRDVA 390
Query: 458 SLEVWPQIVYPPQPTTLSAPLK 393
+ EV ++V PP+ L++ L+
Sbjct: 389 APEVRAEVVEPPEAAALASALQ 324
Score = 36.8 bits (74), Expect(2) = 7e-031
Identities = 14/34 (41%), Positives = 23/34 (67%)
Frame = +3 / +1
Query: 288 KLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLA 389
+LR+G W+ EED L+N++ HG G S++ + A
Sbjct: 247 ELRRGPWTVEEDLLLVNYVAAHGEGR*SALARAA 348
>gb|CW493828.1|CW493828 fsbb001f284m17k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f284m17, DNA
sequence
Length = 772
Score = 116 bits (249), Expect(2) = 1e-030
Identities = 45/71 (63%), Positives = 56/71 (78%)
Frame = +3 / -3
Query: 390 GLQRCGKSCRLRWINYLRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEI 569
GL R GKSCRLRW+NYLRP ++RG+ E+ +I ELHA GN+WS+I+ QLPGRTDNEI
Sbjct: 215 GLNRNGKSCRLRWLNYLRPGVRRGSITAGEDTVIRELHARWGNKWSKISKQLPGRTDNEI 36
Query: 570 KNLWNSCIKKK 602
KN W + I+KK
Sbjct: 35 KNYWRTRIQKK 3
Score = 60.2 bits (125), Expect = 1e-007
Identities = 33/71 (46%), Positives = 34/71 (47%)
Frame = -3 / +1
Query: 601 FFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANAPLLRSGLR*FIHL 422
FF + FLISLSV PGSC I DHLFP A P L G R* H
Sbjct: 4 FFWILVLQ*FLISLSVRPGSCLEILDHLFPHLAWSSRITVSSPAVMLPRLTPGRR*LSHR 183
Query: 421 SLQLFPHL*SP 389
SLQL P L P
Sbjct: 184 SLQLLPFLFRP 216
Score = 59.3 bits (123), Expect = 2e-007
Identities = 26/70 (37%), Positives = 38/70 (54%)
Frame = -2 / +3
Query: 602 LLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECPSLEVWPQIVYPP 423
LLLD P +LDL++ P +L +L P VP V+L D + WP++V PP
Sbjct: 3 LLLDPGPPVVLDLVVGPAGELLGDLGPLVPPPRVELPDHRVLPRRDAAPPHPWPKVVEPP 182
Query: 422 QPTTLSAPLK 393
QP L+ P++
Sbjct: 183 QPAALAVPVQ 212
Score = 43.2 bits (88), Expect(2) = 1e-030
Identities = 15/34 (44%), Positives = 25/34 (73%)
Frame = +3 / -1
Query: 291 LRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAG 392
+RKG W+ EED L+++I++HG G W ++ + AG
Sbjct: 469 VRKGPWTLEEDLILVSYISQHGEGSWDNLARSAG 368
>gb|CL173222.1|CL173222 104_376_10890727_116_31795_247 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10890727, DNA
sequence
Length = 560
Score = 135 bits (289), Expect = 3e-030
Identities = 49/80 (61%), Positives = 60/80 (75%)
Frame = +3 / +1
Query: 255 EMGRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWIN 434
+ GR CC K KG W+ +ED++L+ +I HG GCW S+PK AGL RCGKSCRLRWIN
Sbjct: 304 DKGRSPCCEKAHTNKGAWTKDEDQRLVAYIKAHGEGCWRSLPKAAGLLRCGKSCRLRWIN 483
Query: 435 YLRPDLKRGAFAQDEEDLII 494
YLRPDLKRG F +E++LII
Sbjct: 484 YLRPDLKRGNFTHEEDELII 543
Score = 75.3 bits (158), Expect = 3e-012
Identities = 34/78 (43%), Positives = 48/78 (61%)
Frame = -2 / -3
Query: 494 DDEVFFVLGECPSLEVWPQIVYPPQPTTLSAPLKPSEFGNRAPAAMAMLCYVIHEFLILL 315
DDE F++GE +LEVW ++V PP+ L+A + G R PAA A+ V E L+L+
Sbjct: 543 DDEFVFLVGEVAALEVWAEVVDPPEAAALAAAQQAGRLGERPPAAFAVGLDVSDEPLVLI 364
Query: 314 RGPEPLSQLLLVAARMPP 261
GP L ++ L+AAR PP
Sbjct: 363 LGPGALVRVRLLAAR*PP 310
Score = 51.5 bits (106), Expect = 5e-005
Identities = 23/44 (52%), Positives = 27/44 (61%)
Frame = -3 / -1
Query: 472 WANAPLLRSGLR*FIHLSLQLFPHL*SPASLGTELQQPWPCFVM 341
W P LRSG R* IH QL P PA+LG++LQQP P +M
Sbjct: 521 WVKLPRLRSGRR*LIHRRRQLLPQRSRPAALGSDLQQPSPWALM 390
Score = 38.2 bits (77), Expect = 0.45
Identities = 26/70 (37%), Positives = 29/70 (41%)
Frame = +1 / +2
Query: 262 GGILAATSRS*ERGSGPLRRMRNS*IT*QSMAMAAGALFPNSLGFKGAERVVG*GG*TI* 441
GG AA R+ R GP R S +T + A AAG P A R GG T
Sbjct: 311 GGHRAARRRTRTRAPGPRMRTSGSSLTSRPTAKAAGGRSPRRPACCAAARAAASGGSTTS 490
Query: 442 GQTSREGHSP 471
QTS SP
Sbjct: 491 AQTSSAATSP 520
>gb|BE354970.1|BE354970 DG1_10_C10.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 414
Score = 135 bits (289), Expect = 3e-030
Identities = 51/89 (57%), Positives = 68/89 (76%)
Frame = +3 / +3
Query: 288 KLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRGAF 467
+LR+G W+ EED LMN+I HG G W+ + + +GL+R GKSCRLRW+NYL+PD+KRG
Sbjct: 147 ELRRGPWTLEEDNLLMNYIACHGEGRWNLLARCSGLKRTGKSCRLRWLNYLKPDIKRGNL 326
Query: 468 AQDEEDLIIELHAVLGNRWSQIAAQLPGR 554
+E+ LI+ELH+ GNRWS+IA LPGR
Sbjct: 327 TPEEQLLILELHSKWGNRWSRIAQHLPGR 413
Score = 82.2 bits (173), Expect = 3e-014
Identities = 33/83 (39%), Positives = 51/83 (61%)
Frame = -2 / -2
Query: 554 PPWQLRCNLRPPVPEDSVQLDDEVFFVLGECPSLEVWPQIVYPPQPTTLSAPLKPSEFGN 375
PPWQ+ + RPPV ++L+DE + E +L+V ++V PPQP L+ PL+P G
Sbjct: 413 PPWQVLRDPRPPVSPLGMELEDEELLLRREVAALDVRLEVVEPPQPAALAGPLQPGATGE 234
Query: 374 RAPAAMAMLCYVIHEFLILLRGP 306
PAA+A+ V+HE ++ L+ P
Sbjct: 233 EIPAALAVASNVVHEEVVFLKRP 165
Score = 57.0 bits (118), Expect = 1e-006
Identities = 29/66 (43%), Positives = 31/66 (46%)
Frame = -3 / -3
Query: 550 PGSCAAI*DHLFPRTACXXXXXXXXSWANAPLLRSGLR*FIHLSLQLFPHL*SPASLGTE 371
PG C AI DHLFP S P L SGLR* HLS QL P L +P
Sbjct: 409 PGRCCAILDHLFPHLEWSSRMRSCSSGVRLPRLMSGLR*LSHLSRQLLPVLFNPEQRARR 230
Query: 370 LQQPWP 353
Q+P P
Sbjct: 229 FQRPSP 212
Score = 39.6 bits (80), Expect = 0.17
Identities = 26/83 (31%), Positives = 33/83 (39%)
Frame = +1 / +1
Query: 307 GPLRRMRNS*IT*QSMAMAAGALFPNSLGFKGAERVVG*GG*TI*GQTSREGHSPXXXXX 486
G LR+ +S* T + A AAG P + G +G R G*GG T TS S
Sbjct: 166 GRLRKTTSS*TTLLATARAAGISSPVAPG*RGPARAAG*GGSTTSSLTSSAATSRRRSSS 345
Query: 487 XXXXXXXXXXXXXXXXQRSCQGG 555
+ +CQGG
Sbjct: 346 SSSSSIPSGETGGRGSRSTCQGG 414
>gb|CN135779.1|CN135779 OX1_38_H11.g1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_38_H11_A002 5', mRNA sequence
Length = 840
Score = 118 bits (253), Expect(2) = 4e-030
Identities = 52/113 (46%), Positives = 67/113 (59%)
Frame = +3 / +2
Query: 387 AGLQRCGKSCRLRWINYLRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNE 566
AGL+R GKSCRLRW+NYL P L+RG DEE I+ELHA G+RWS+IA LPGRTD E
Sbjct: 455 AGLRRTGKSCRLRWVNYLHPGLRRGRITADEERRIVELHAQWGSRWSRIARSLPGRTDXE 634
Query: 567 IKNLWNSCIKKKLRQKGIDPNTHKPLTEADHGGAAPTISTERTSGSSDINPSS 725
IKN W + +KK ++ +T A+ + S S +P+S
Sbjct: 635 IKNFWRTRTRKKALEERRAAGAAAAVTATAEPAASSSSSVTMISECRPGSPNS 793
Score = 53.3 bits (110), Expect = 1e-005
Identities = 31/77 (40%), Positives = 35/77 (45%)
Frame = -3 / -1
Query: 604 SFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANAPLLRSGLR*FIH 425
+FFL+ +FLIS SV PG A+ DHL P A S P R G R*F H
Sbjct: 672 AFFLVLVLQKFLISXSVRPGKLLAMRDHLLPHCAWSSTMRRSSSAVMRPRRRPGWR*FTH 493
Query: 424 LSLQLFPHL*SPASLGT 374
QL P PA T
Sbjct: 492 RRRQLLPVRRRPARTTT 442
Score = 41.8 bits (85), Expect = 0.036
Identities = 22/69 (31%), Positives = 33/69 (47%)
Frame = -2 / -3
Query: 611 LPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECPSLEVWPQIV 432
L LL P +LDL++ Q + RPP V+L D V G+ S E ++V
Sbjct: 679 LESLLPGPCPPEVLDLVVGASGQAPGDARPPASPLRVELHDASLLVGGDAASPEARVEVV 500
Query: 431 YPPQPTTLS 405
+PP+ L+
Sbjct: 499 HPPEAAALA 473
Score = 39.6 bits (80), Expect(2) = 4e-030
Identities = 15/39 (38%), Positives = 24/39 (61%)
Frame = +3 / +3
Query: 291 LRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCG 407
+RKG W+ EEDE+L+ + G W + K++GL+ G
Sbjct: 90 MRKGPWTDEEDEQLVRFVRLFGERRWDFLAKVSGLRGGG 206
>gb|CW374733.1|CW374733 fsbb001f051l23f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f051l23, DNA
sequence
Length = 807
Score = 119 bits (254), Expect(2) = 7e-030
Identities = 46/74 (62%), Positives = 58/74 (78%)
Frame = +3 / +1
Query: 390 GLQRCGKSCRLRWINYLRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEI 569
GL R GKSCRLRW+NYLRP ++RG+ E+ +I ELHA GN+WS+I+ QLPGRTDNEI
Sbjct: 247 GLNRNGKSCRLRWLNYLRPGVRRGSITAGEDTVIRELHARWGNKWSKISKQLPGRTDNEI 426
Query: 570 KNLWNSCIKKKLRQ 611
KN W + I+KK +Q
Sbjct: 427 KNYWRTRIQKKKKQ 468
Score = 63.4 bits (132), Expect = 1e-008
Identities = 34/74 (45%), Positives = 35/74 (47%)
Frame = -3 / -2
Query: 610 CLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANAPLLRSGLR*F 431
C FF + FLISLSV PGSC I DHLFP A P L G R*
Sbjct: 467 CFFFFWILVLQ*FLISLSVRPGSCLEILDHLFPHLAWSSRITVSSPAVMLPRLTPGRR*L 288
Query: 430 IHLSLQLFPHL*SP 389
H SLQL P L P
Sbjct: 287 SHRSLQLLPFLFRP 246
Score = 59.3 bits (123), Expect = 2e-007
Identities = 26/70 (37%), Positives = 38/70 (54%)
Frame = -2 / -1
Query: 602 LLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECPSLEVWPQIVYPP 423
LLLD P +LDL++ P +L +L P VP V+L D + WP++V PP
Sbjct: 459 LLLDPGPPVVLDLVVGPAGELLGDLGPLVPPPRVELPDHRVLPRRDAAPPHPWPKVVEPP 280
Query: 422 QPTTLSAPLK 393
QP L+ P++
Sbjct: 279 QPAALAVPVQ 250
Score = 38.2 bits (77), Expect(2) = 7e-030
Identities = 13/31 (41%), Positives = 22/31 (70%)
Frame = +3 / +2
Query: 300 GLWSPEEDEKLMNHITKHGHGCWSSVPKLAG 392
G W+ EED L+++I++HG G W ++ + AG
Sbjct: 2 GPWTLEEDLILVSYISQHGEGSWDNLARSAG 94
>gb|CN137174.1|CN137174 OX1_55_D05.g1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_55_D05_A002 5', mRNA sequence
Length = 810
Score = 117 bits (251), Expect(2) = 7e-030
Identities = 45/67 (67%), Positives = 52/67 (77%)
Frame = +3 / +3
Query: 387 AGLQRCGKSCRLRWINYLRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNE 566
AGL+R GKSCRLRW+NYL P L+RG DEE I+ELHA G+RWS+IA LPGRTDNE
Sbjct: 603 AGLRRTGKSCRLRWVNYLHPGLRRGRITADEERRIVELHAQWGSRWSRIARSLPGRTDNE 782
Query: 567 IKNLWNS 587
IKN W +
Sbjct: 783 IKNFWRT 803
Score = 49.6 bits (102), Expect = 2e-004
Identities = 29/68 (42%), Positives = 31/68 (45%)
Frame = -3 / -3
Query: 577 RFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANAPLLRSGLR*FIHLSLQLFPHL 398
+FLISLSV PG A+ DHL P A S P R G R*F H QL P
Sbjct: 793 KFLISLSVRPGKLLAMRDHLLPHCAWSSTMRRSSSAVMRPRRRPGWR*FTHRRRQLLPVR 614
Query: 397 *SPASLGT 374
PA T
Sbjct: 613 RRPARTTT 590
Score = 41.4 bits (84), Expect = 0.049
Identities = 19/59 (32%), Positives = 30/59 (50%)
Frame = -2 / -2
Query: 581 P*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECPSLEVWPQIVYPPQPTTLS 405
P +LDL++ Q + RPP V+L D V G+ S E ++V+PP+ L+
Sbjct: 797 PEVLDLVVGASGQAPGDARPPASPLRVELHDASLLVGGDAASPEARVEVVHPPEAAALA 621
Score = 39.6 bits (80), Expect(2) = 7e-030
Identities = 15/39 (38%), Positives = 24/39 (61%)
Frame = +3 / +1
Query: 291 LRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCG 407
+RKG W+ EEDE+L+ + G W + K++GL+ G
Sbjct: 238 MRKGPWTDEEDEQLVRFVRLFGERRWDFLAKVSGLRGGG 354
>gb|AF474128.1| Sorghum bicolor typical P-type R2R3 Myb protein (Myb34) gene, partial
cds
Length = 2210
Score = 76.7 bits (161), Expect(3) = 8e-030
Identities = 26/45 (57%), Positives = 37/45 (82%)
Frame = +3 / +2
Query: 387 AGLQRCGKSCRLRWINYLRPDLKRGAFAQDEEDLIIELHAVLGNR 521
AGL+RCGKSCRLRW+NYLRPD++ G F +E+ +I+ L+ LG++
Sbjct: 1643 AGLKRCGKSCRLRWLNYLRPDIRHGGFTAEEDAVILSLYTQLGSK 1777
Score = 52.4 bits (108), Expect(3) = 8e-030
Identities = 19/33 (57%), Positives = 27/33 (81%)
Frame = +3 / +1
Query: 507 VLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKL 605
+L RWS IA+Q+ GRTDN++KN WN+ +KK+L
Sbjct: 1852 LLHARWSLIASQMEGRTDNDVKNHWNTKLKKRL 1950
Score = 51.9 bits (107), Expect(3) = 8e-030
Identities = 17/35 (48%), Positives = 25/35 (71%)
Frame = +3 / +3
Query: 258 MGRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHG 362
MGR CC + +++G WSPEEDE L +++ +HG G
Sbjct: 1371 MGRTPCCDRAAVKRGPWSPEEDEALRSYVQRHGSG 1475
Score = 35.4 bits (71), Expect(2) = 0.70
Identities = 17/27 (62%), Positives = 17/27 (62%)
Frame = -3 / -1
Query: 598 FLMHEFHRFLISLSVLPGSCAAI*DHL 518
FL F FL SLSVLP C AI DHL
Sbjct: 1943 FLSLVFQWFLTSLSVLPSICEAISDHL 1863
Score = 35.4 bits (71), Expect(2) = 2e-004
Identities = 15/34 (44%), Positives = 21/34 (61%)
Frame = -2 / -3
Query: 605 QLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDS 504
+ LL+ VP +LD+++ PP LR RPP E S
Sbjct: 1950 EALLELGVPVVLDVVVRPPLHLRGYQRPPGVEQS 1849
Score = 31.8 bits (63), Expect(2) = 2e-004
Identities = 19/46 (41%), Positives = 19/46 (41%)
Frame = -3 / -3
Query: 523 HLFPRTACXXXXXXXXSWANAPLLRSGLR*FIHLSLQLFPHL*SPA 386
HL P S P SG R* SLQL PHL SPA
Sbjct: 1779 HLLPSWV*RDKMTASSSAVKPPWRMSGRR*LSQRSLQLLPHLLSPA 1642
Score = 24.9 bits (48), Expect(2) = 0.70
Identities = 11/32 (34%), Positives = 13/32 (40%)
Frame = -1 / -3
Query: 321 PPQGTRAPFSASACSSKNASPSQRNAEPGSSN 226
PP T P S C S + P PG S+
Sbjct: 1434 PPPATTGPASRPPCRSTASVPWATPGHPGHSS 1339
>gb|CW404241.1|CW404241 fsbb001f096e20f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f096e20, DNA
sequence
Length = 745
Score = 117 bits (250), Expect(2) = 9e-030
Identities = 45/65 (69%), Positives = 51/65 (78%)
Frame = +3 / -2
Query: 387 AGLQRCGKSCRLRWINYLRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNE 566
AGL+R GKSCRLRW+NYL P L+RG DEE I+ELHA G+RWS+IA LPGRTDNE
Sbjct: 195 AGLRRTGKSCRLRWVNYLHPGLRRGRITADEERRIVELHAQWGSRWSRIARSLPGRTDNE 16
Query: 567 IKNLW 581
IKN W
Sbjct: 15 IKNFW 1
Score = 49.6 bits (102), Expect = 2e-004
Identities = 29/68 (42%), Positives = 31/68 (45%)
Frame = -3 / +2
Query: 577 RFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANAPLLRSGLR*FIHLSLQLFPHL 398
+FLISLSV PG A+ DHL P A S P R G R*F H QL P
Sbjct: 5 KFLISLSVRPGKLLAMRDHLLPHCAWSSTMRRSSSAVMRPRRRPGWR*FTHRRRQLLPVR 184
Query: 397 *SPASLGT 374
PA T
Sbjct: 185 RRPARTTT 208
Score = 41.4 bits (84), Expect = 0.049
Identities = 19/59 (32%), Positives = 30/59 (50%)
Frame = -2 / +1
Query: 581 P*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECPSLEVWPQIVYPPQPTTLS 405
P +LDL++ Q + RPP V+L D V G+ S E ++V+PP+ L+
Sbjct: 1 PEVLDLVVGASGQAPGDARPPASPLRVELHDASLLVGGDAASPEARVEVVHPPEAAALA 177
Score = 39.6 bits (80), Expect(2) = 9e-030
Identities = 15/39 (38%), Positives = 24/39 (61%)
Frame = +3 / -3
Query: 291 LRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCG 407
+RKG W+ EEDE+L+ + G W + K++GL+ G
Sbjct: 560 MRKGPWTDEEDEQLVRFVRLFGERRWDFLAKVSGLRGGG 444
>gb|CW266762.1|CW266762 104_736_11232607_116_35283_022 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11232607, DNA
sequence
Length = 709
Score = 133 bits (284), Expect = 1e-029
Identities = 48/85 (56%), Positives = 67/85 (78%)
Frame = +3 / +2
Query: 291 LRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRGAFA 470
L+KG W+ ED LM+H+ HG G W++V ++ GL RCGKSCRLRW N+LRP+LK+G+F+
Sbjct: 422 LKKGPWTAAEDAMLMDHVRHHGEGNWNAVQRMTGLLRCGKSCRLRWTNHLRPNLKKGSFS 601
Query: 471 QDEEDLIIELHAVLGNRWSQIAAQL 545
DEE LI +LHA LGN+W+++AA +
Sbjct: 602 PDEELLIAQLHAQLGNKWARMAAHV 676
Score = 49.6 bits (102), Expect = 2e-004
Identities = 29/82 (35%), Positives = 42/82 (51%)
Frame = -2 / -1
Query: 542 LRCNLRPPVPEDSVQLDDEVFFVLGECPSLEVWPQIVYPPQPTTLSAPLKPSEFGNRAPA 363
+R + RP V E V+L DE V GE LEV ++V P Q L+A + + P
Sbjct: 673 MRGHARPLVAELRVELGDEELLVGGEGALLEVGAEVVGPAQAAALAAAKQAGHPLHCVPV 494
Query: 362 AMAMLCYVIHEFLILLRGPEPL 297
+A++ V+HE +L P PL
Sbjct: 493 PLAVVPDVVHEHGVLRCRPRPL 428
>gb|CW266763.1|CW266763 104_736_11232607_148_35287_022 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11232607, DNA
sequence
Length = 631
Score = 133 bits (284), Expect = 1e-029
Identities = 48/85 (56%), Positives = 67/85 (78%)
Frame = +3 / -3
Query: 291 LRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRGAFA 470
L+KG W+ ED LM+H+ HG G W++V ++ GL RCGKSCRLRW N+LRP+LK+G+F+
Sbjct: 383 LKKGPWTAAEDAMLMDHVRHHGEGNWNAVQRMTGLLRCGKSCRLRWTNHLRPNLKKGSFS 204
Query: 471 QDEEDLIIELHAVLGNRWSQIAAQL 545
DEE LI +LHA LGN+W+++AA +
Sbjct: 203 PDEELLIAQLHAQLGNKWARMAAHV 129
Score = 49.6 bits (102), Expect = 2e-004
Identities = 29/82 (35%), Positives = 42/82 (51%)
Frame = -2 / +3
Query: 542 LRCNLRPPVPEDSVQLDDEVFFVLGECPSLEVWPQIVYPPQPTTLSAPLKPSEFGNRAPA 363
+R + RP V E V+L DE V GE LEV ++V P Q L+A + + P
Sbjct: 132 MRGHARPLVAELRVELGDEELLVGGEGALLEVGAEVVGPAQAAALAAAKQAGHPLHCVPV 311
Query: 362 AMAMLCYVIHEFLILLRGPEPL 297
+A++ V+HE +L P PL
Sbjct: 312 PLAVVPDVVHEHGVLRCRPRPL 377
>gb|CW113883.1|CW113883 104_488_11105692_116_34560_010 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11105692, DNA
sequence
Length = 674
Score = 83.5 bits (176), Expect(2) = 2e-029
Identities = 31/38 (81%), Positives = 35/38 (92%)
Frame = +3 / +3
Query: 282 KQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGL 395
+QKLRKGLWSPEEDEKL NHI ++G GCWSSVPKLAG+
Sbjct: 378 QQKLRKGLWSPEEDEKLYNHIIRYGVGCWSSVPKLAGM 491
Score = 68.9 bits (144), Expect(2) = 2e-029
Identities = 25/28 (89%), Positives = 27/28 (96%)
Frame = +3 / +3
Query: 390 GLQRCGKSCRLRWINYLRPDLKRGAFAQ 473
GLQRCGKSCRL WINYLRPDLKRG+F+Q
Sbjct: 591 GLQRCGKSCRLXWINYLRPDLKRGSFSQ 674
Score = 37.7 bits (76), Expect(2) = 2e-006
Identities = 17/33 (51%), Positives = 20/33 (60%)
Frame = -3 / -2
Query: 460 PLLRSGLR*FIHLSLQLFPHL*SPASLGTELQQ 362
P RSG R* IH S QL PHL SP + + Q+
Sbjct: 661 PRFRSGRR*LIHXSRQLLPHLCSPVPMADDGQR 563
Score = 36.3 bits (73), Expect(2) = 2e-006
Identities = 19/38 (50%), Positives = 24/38 (63%)
Frame = -2 / -1
Query: 386 EFGNRAPAAMAMLCYVIHEFLILLRGPEPLSQLLLVAA 273
E G+ APA A+ V+ E L+ L PE L+QLLL AA
Sbjct: 482 ELGHGAPAPDAVADDVVVELLVFLGRPESLAQLLLHAA 369
Score = 30.4 bits (60), Expect(2) = 0.070
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = -1 / -3
Query: 387 RVWEQSSSSHGHALLCDS*VSHPPQGTRAPFSASA 283
R W +SSS+ + C S P+ TR P +ASA
Sbjct: 483 RAWARSSSTRRRSG*CGCRASRLPRATRVPCAASA 379
Score = 28.1 bits (55), Expect(2) = 0.070
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -2 / -1
Query: 473 LGECPSLEVWPQIVYPPQPTTLSAPLKPSEFG 378
L E L+V Q+V P + L+APL+P G
Sbjct: 674 LREAAPLQVGAQVVDPXKSAALAAPLQPCTNG 579
>gb|CW363913.1|CW363913 fsbb001f035l18f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f035l18, DNA
sequence
Length = 712
Score = 78.0 bits (164), Expect(3) = 3e-029
Identities = 33/50 (66%), Positives = 36/50 (72%)
Frame = +3 / +2
Query: 372 SVPKLAGLQRCGKSCRLRWINYLRPDLKRGAFAQDEEDLIIELHAVLGNR 521
SV AGL R GKSCRLRW+NYL P LKRG + EE LI+ELHA GNR
Sbjct: 248 SVSFQAGLNRTGKSCRLRWVNYLHPGLKRGRMSPHEERLILELHARWGNR 397
Score = 57.4 bits (119), Expect(3) = 3e-029
Identities = 20/33 (60%), Positives = 28/33 (84%)
Frame = +3 / +2
Query: 516 NRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQK 614
NRWS+IA +LPGRTDNEIKN W + ++KK +++
Sbjct: 482 NRWSRIARRLPGRTDNEIKNYWRTHMRKKAQER 580
Score = 38.6 bits (78), Expect(2) = 5e-005
Identities = 19/30 (63%), Positives = 20/30 (66%)
Frame = -3 / -2
Query: 604 SFFLMHEFHRFLISLSVLPGSCAAI*DHLF 515
+FFLM FLISLSV PG AI DHLF
Sbjct: 570 AFFLMCVLQ*FLISLSVRPGKRRAILDHLF 481
Score = 34.1 bits (68), Expect(3) = 3e-029
Identities = 12/39 (30%), Positives = 24/39 (61%)
Frame = +3 / +1
Query: 282 KQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQ 398
+++ RKG W+ +ED +L+ + G W + K++GL+
Sbjct: 25 REETRKGPWTEQEDLQLVCTVRLFGERRWDFIAKVSGLR 141
Score = 30.9 bits (61), Expect(2) = 5e-005
Identities = 20/50 (40%), Positives = 20/50 (40%)
Frame = -3 / -2
Query: 520 LFPRTACXXXXXXXXSWANAPLLRSGLR*FIHLSLQLFPHL*SPASLGTE 371
LFP AC P LR G R* S QL P SPA TE
Sbjct: 396 LFPHRACSSRMRRSSWGDMRPRLRPG*R*LTQRSRQLLPVRLSPA*KDTE 247
>gb|CW258488.1|CW258488 104_724_11227903_116_35164_026 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11227903, DNA
sequence
Length = 664
Score = 78.0 bits (164), Expect(3) = 3e-029
Identities = 33/50 (66%), Positives = 36/50 (72%)
Frame = +3 / -2
Query: 372 SVPKLAGLQRCGKSCRLRWINYLRPDLKRGAFAQDEEDLIIELHAVLGNR 521
SV AGL R GKSCRLRW+NYL P LKRG + EE LI+ELHA GNR
Sbjct: 435 SVSFQAGLNRTGKSCRLRWVNYLHPGLKRGRMSPHEERLILELHARWGNR 286
Score = 57.4 bits (119), Expect(3) = 3e-029
Identities = 20/33 (60%), Positives = 28/33 (84%)
Frame = +3 / -2
Query: 516 NRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQK 614
NRWS+IA +LPGRTDNEIKN W + ++KK +++
Sbjct: 201 NRWSRIARRLPGRTDNEIKNYWRTHMRKKAQER 103
Score = 38.6 bits (78), Expect(2) = 5e-005
Identities = 19/30 (63%), Positives = 20/30 (66%)
Frame = -3 / +2
Query: 604 SFFLMHEFHRFLISLSVLPGSCAAI*DHLF 515
+FFLM FLISLSV PG AI DHLF
Sbjct: 113 AFFLMCVLQ*FLISLSVRPGKRRAILDHLF 202
Score = 34.1 bits (68), Expect(3) = 3e-029
Identities = 12/39 (30%), Positives = 24/39 (61%)
Frame = +3 / -1
Query: 282 KQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQ 398
+++ RKG W+ +ED +L+ + G W + K++GL+
Sbjct: 658 REETRKGPWTEQEDLQLVCTVRLFGERRWDFIAKVSGLR 542
Score = 30.9 bits (61), Expect(2) = 5e-005
Identities = 20/50 (40%), Positives = 20/50 (40%)
Frame = -3 / +2
Query: 520 LFPRTACXXXXXXXXSWANAPLLRSGLR*FIHLSLQLFPHL*SPASLGTE 371
LFP AC P LR G R* S QL P SPA TE
Sbjct: 287 LFPHRACSSRMRRSSWGDMRPRLRPG*R*LTQRSRQLLPVRLSPA*KDTE 436
>gb|BZ424048.1|BZ424048 id56d03.g1 WGS-SbicolorF (DH5a methyl filtered) Sorghum bicolor
genomic clone id56d03 5', DNA sequence
Length = 748
Score = 84.5 bits (178), Expect(3) = 3e-029
Identities = 29/46 (63%), Positives = 38/46 (82%)
Frame = +3 / +2
Query: 384 LAGLQRCGKSCRLRWINYLRPDLKRGAFAQDEEDLIIELHAVLGNR 521
+ GL RCGKSCRLRW NYLRPD+KRG F +E + I++LHA++GN+
Sbjct: 161 IPGLNRCGKSCRLRWTNYLRPDIKRGPFTPEEHNSILQLHAIVGNK 298
Score = 68.4 bits (143), Expect(3) = 3e-029
Identities = 26/33 (78%), Positives = 30/33 (90%)
Frame = +3 / +2
Query: 519 RWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKG 617
RWS IAAQLPGRTDNEIKN WN+ +KK+LRQ+G
Sbjct: 509 RWSMIAAQLPGRTDNEIKNYWNTHMKKQLRQEG 607
Score = 44.6 bits (91), Expect = 0.005
Identities = 22/33 (66%), Positives = 22/33 (66%)
Frame = -3 / -2
Query: 616 PFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHL 518
P S F M F FLISLSV PGSCAAI DHL
Sbjct: 606 PSWRSCFFMCVFQ*FLISLSVRPGSCAAIMDHL 508
Score = 38.2 bits (77), Expect = 0.45
Identities = 18/37 (48%), Positives = 24/37 (64%)
Frame = -2 / -1
Query: 629 VGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPP 519
+G +A L QLLL RVP +LDL++ P QL + PP
Sbjct: 619 LGGSALLAQLLLHVRVPVVLDLVVRPARQLCRDHGPP 509
Score = 23.1 bits (44), Expect(3) = 3e-029
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = +3 / +2
Query: 351 HGHGCWSSVPKLAG 392
+G G W +PKLAG
Sbjct: 2 NGTGNWRMLPKLAG 43
>gb|CW157627.1|CW157627 104_561_11147625_148_36388_045 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11147625, DNA
sequence
Length = 696
Score = 87.2 bits (184), Expect(2) = 6e-029
Identities = 35/52 (67%), Positives = 42/52 (80%)
Frame = +3 / +3
Query: 384 LAGLQRCGKSCRLRWINYLRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAA 539
L GLQR GKSCRLRWINYLRP LKRG F+Q+EED++I L A LGN+ + + A
Sbjct: 501 LKGLQRNGKSCRLRWINYLRPGLKRGMFSQEEEDVVINLQAKLGNK*NSLPA 656
Score = 67.0 bits (140), Expect(2) = 6e-029
Identities = 24/37 (64%), Positives = 29/37 (78%)
Frame = +3 / +2
Query: 282 KQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAG 392
K RKGLWSPEED++L ++I KHG GCWS+VP AG
Sbjct: 134 KMNYRKGLWSPEEDQRLRDYILKHGLGCWSAVPAKAG 244
Score = 44.1 bits (90), Expect(2) = 1e-007
Identities = 22/45 (48%), Positives = 27/45 (60%)
Frame = -1 / -2
Query: 405 RTFEAQRVWEQSSSSHGHALLCDS*VSHPPQGTRAPFSASACSSK 271
RT Q + EQ SSS GHA C * S PPQ T AP +S+ +S+
Sbjct: 257 RTAAHQPLQEQHSSSRGHA*GCSP*ASGPPQETTAPSGSSSWASR 123
Score = 42.8 bits (87), Expect(2) = 0.016
Identities = 19/37 (51%), Positives = 22/37 (59%)
Frame = +2 / +1
Query: 281 QAEAEKGALVP*GG*ETHESHNKAWPWLLELCSQTRW 391
Q E +GA+V *GG E H +AWP LLE CS W
Sbjct: 133 QDELPEGAVVS*GGPEAQGLHPQAWPRLLECCSCKGW 243
Score = 38.2 bits (77), Expect(2) = 1e-007
Identities = 17/45 (37%), Positives = 28/45 (62%)
Frame = -2 / -2
Query: 518 VPEDSVQLDDEVFFVLGECPSLEVWPQIVYPPQPTTLSAPLKPSE 384
V + +++DD+VF +L E +L+ PQ+V P Q T L+ L+ E
Sbjct: 635 VAQLGLEVDDDVFLLLREHSALQPGPQVVDPTQTTALAISLETFE 501
Score = 34.1 bits (68), Expect = 7.9
Identities = 16/27 (59%), Positives = 19/27 (70%)
Frame = -2 / -3
Query: 377 NRAPAAMAMLCYVIHEFLILLRGPEPL 297
N PAA AML V+ E L+LLR P+PL
Sbjct: 229 NSTPAAEAMLEDVVPEPLVLLRRPQPL 149
Score = 21.7 bits (41), Expect(2) = 0.016
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = +1 / +3
Query: 1915 SSPKLSTAAMHVHAN*LLH 1971
SSP LS +MH+ A * H
Sbjct: 264 SSPLLSYPSMHIAAA*QAH 320
>gb|CW028250.1|CW028250 104_255_10498984_114_30394 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10498984, DNA
sequence
Length = 833
Score = 84.5 bits (178), Expect(2) = 7e-029
Identities = 29/44 (65%), Positives = 37/44 (84%)
Frame = +3 / +2
Query: 390 GLQRCGKSCRLRWINYLRPDLKRGAFAQDEEDLIIELHAVLGNR 521
GL RCGKSCRLRW NYLRPD+KRG F +E+ I++LHA++GN+
Sbjct: 50 GLNRCGKSCRLRWTNYLRPDIKRGPFTPEEQKSIVQLHAIVGNK 181
Score = 69.8 bits (146), Expect(2) = 7e-029
Identities = 26/35 (74%), Positives = 31/35 (88%)
Frame = +3 / +2
Query: 519 RWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGID 623
RWS IAAQLPGRTDNEIKN WN+ +KK+LR+ G+D
Sbjct: 551 RWSMIAAQLPGRTDNEIKNYWNTHLKKQLRRMGLD 655
Score = 53.3 bits (110), Expect(2) = 2e-012
Identities = 20/43 (46%), Positives = 31/43 (72%)
Frame = -2 / -2
Query: 518 VPEDSVQLDDEVFFVLGECPSLEVWPQIVYPPQPTTLSAPLKP 390
V +D V+LDD + + E P+L+V P++V PPQP L+AP++P
Sbjct: 178 VADDGVELDDGLLLLRREGPALDVRPEVVGPPQPAALAAPVQP 50
Score = 45.5 bits (93), Expect(2) = 2e-012
Identities = 23/35 (65%), Positives = 23/35 (65%)
Frame = -3 / -3
Query: 622 SMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHL 518
S P S FL F FLISLSV PGSCAAI DHL
Sbjct: 654 SRPIRRSCFLRCVFQ*FLISLSVRPGSCAAIMDHL 550
Score = 37.7 bits (76), Expect = 0.62
Identities = 16/35 (45%), Positives = 23/35 (65%)
Frame = -2 / -2
Query: 623 INAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPP 519
+ A QLLL+ RVP +LDL++ P +LR + PP
Sbjct: 655 VEAHPAQLLLEVRVPVVLDLVVRPARELRRDHGPP 551
>gb|CN129081.1|CN129081 RHOH1_33_H11.b3_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_33_H11_A002 3', mRNA sequence
Length = 752
Score = 130 bits (278), Expect = 9e-029
Identities = 48/85 (56%), Positives = 67/85 (78%)
Frame = +3 / +2
Query: 291 LRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRGAFA 470
L+KG W+ ED L++++ KHG G W++V K GL RCGKSCRLRW N+LRP+LK+GAF
Sbjct: 185 LKKGPWTSAEDAILVDYVKKHGEGNWNAVQKNTGLFRCGKSCRLRWANHLRPNLKKGAFT 364
Query: 471 QDEEDLIIELHAVLGNRWSQIAAQL 545
+EE LII+LHA +GN+W+++AA +
Sbjct: 365 PEEERLIIQLHAKMGNKWARMAAHV 439
Score = 62.9 bits (131), Expect = 2e-008
Identities = 30/78 (38%), Positives = 42/78 (53%)
Frame = -2 / -2
Query: 524 PPVPEDSVQLDDEVFFVLGECPSLEVWPQIVYPPQPTTLSAPLKPSEFGNRAPAAMAMLC 345
P VP V+LDDE + GE P LEV P++V P + L+A +P +R P A+L
Sbjct: 418 PLVPHLGVELDDEALLLRGEGPLLEVGPEVVRPAEAAALAAAEQPGVLLHRVPVPFAVLL 239
Query: 344 YVIHEFLILLRGPEPLSQ 291
V+H+ +L P P Q
Sbjct: 238 DVVHQDGVLRGRPWPFLQ 185
Score = 48.3 bits (99), Expect = 4e-004
Identities = 28/65 (43%), Positives = 29/65 (44%)
Frame = -3 / -3
Query: 538 AAI*DHLFPRTACXXXXXXXXSWANAPLLRSGLR*FIHLSLQLFPHL*SPASLGTELQQP 359
AAI HLFP A S AP LR GLR F QL P SP T Q P
Sbjct: 432 AAILAHLFPILAWSWMMRRSSSGVKAPFLRLGLRWFAQRRRQLLPQRNSPVFFCTAFQFP 253
Query: 358 WPCFV 344
PCF+
Sbjct: 252 SPCFL 238
>gb|CN129172.1|CN129172 RHOH1_33_H11.g1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_33_H11_A002 5', mRNA sequence
Length = 855
Score = 130 bits (278), Expect = 9e-029
Identities = 48/85 (56%), Positives = 67/85 (78%)
Frame = +3 / +1
Query: 291 LRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRGAFA 470
L+KG W+ ED L++++ KHG G W++V K GL RCGKSCRLRW N+LRP+LK+GAF
Sbjct: 358 LKKGPWTSAEDAILVDYVKKHGEGNWNAVQKNTGLFRCGKSCRLRWANHLRPNLKKGAFT 537
Query: 471 QDEEDLIIELHAVLGNRWSQIAAQL 545
+EE LII+LHA +GN+W+++AA +
Sbjct: 538 PEEERLIIQLHAKMGNKWARMAAHV 612
Score = 62.9 bits (131), Expect = 2e-008
Identities = 30/78 (38%), Positives = 42/78 (53%)
Frame = -2 / -1
Query: 524 PPVPEDSVQLDDEVFFVLGECPSLEVWPQIVYPPQPTTLSAPLKPSEFGNRAPAAMAMLC 345
P VP V+LDDE + GE P LEV P++V P + L+A +P +R P A+L
Sbjct: 591 PLVPHLGVELDDEALLLRGEGPLLEVGPEVVRPAEAAALAAAEQPGVLLHRVPVPFAVLL 412
Query: 344 YVIHEFLILLRGPEPLSQ 291
V+H+ +L P P Q
Sbjct: 411 DVVHQDGVLRGRPWPFLQ 358
Score = 48.3 bits (99), Expect = 4e-004
Identities = 28/65 (43%), Positives = 29/65 (44%)
Frame = -3 / -2
Query: 538 AAI*DHLFPRTACXXXXXXXXSWANAPLLRSGLR*FIHLSLQLFPHL*SPASLGTELQQP 359
AAI HLFP A S AP LR GLR F QL P SP T Q P
Sbjct: 605 AAILAHLFPILAWSWMMRRSSSGVKAPFLRLGLRWFAQRRRQLLPQRNSPVFFCTAFQFP 426
Query: 358 WPCFV 344
PCF+
Sbjct: 425 SPCFL 411
>gb|CF430007.1|CF430007 PH1_25_C07.g1_A002 Phosphorous-deficient seedlings Sorghum bicolor
cDNA clone PH1_25_C07_A002 5', mRNA sequence
Length = 784
Score = 122 bits (261), Expect(2) = 1e-028
Identities = 53/115 (46%), Positives = 69/115 (60%)
Frame = +3 / +1
Query: 381 KLAGLQRCGKSCRLRWINYLRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTD 560
+ AGL+R GKSCRLRW+NYL P L+RG DEE I+ELHA G+RWS+IA LPGRTD
Sbjct: 283 RAAGLRRTGKSCRLRWVNYLHPGLRRGRITADEERRIVELHAQWGSRWSRIARSLPGRTD 462
Query: 561 NEIKNLWNSCIKKKLRQKGIDPNTHKPLTEADHGGAAPTISTERTSGSSDINPSS 725
NEIKN W + +KK ++ +T A+ + S S +P+S
Sbjct: 463 NEIKNFWRTRTRKKALEERRAAGAAAAVTATAEPAASSSSSVTMISECRPGSPNS 627
Score = 55.6 bits (115), Expect = 3e-006
Identities = 31/74 (41%), Positives = 36/74 (48%)
Frame = -3 / -3
Query: 604 SFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANAPLLRSGLR*FIH 425
+FFL+ +FLISLSV PG A+ DHL P A S P R G R*F H
Sbjct: 506 AFFLVLVLQKFLISLSVRPGKLLAMRDHLLPHCAWSSTMRRSSSAVMRPRRRPGWR*FTH 327
Query: 424 LSLQLFPHL*SPAS 383
QL P PA+
Sbjct: 326 RRRQLLPVRRRPAA 285
Score = 41.8 bits (85), Expect = 0.036
Identities = 22/69 (31%), Positives = 33/69 (47%)
Frame = -2 / -2
Query: 611 LPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECPSLEVWPQIV 432
L LL P +LDL++ Q + RPP V+L D V G+ S E ++V
Sbjct: 513 LESLLPGPCPPEVLDLVVGASGQAPGDARPPASPLRVELHDASLLVGGDAASPEARVEVV 334
Query: 431 YPPQPTTLS 405
+PP+ L+
Sbjct: 333 HPPEAAALA 307
Score = 27.2 bits (53), Expect(2) = 1e-028
Identities = 9/15 (60%), Positives = 13/15 (86%)
Frame = +3 / +2
Query: 291 LRKGLWSPEEDEKLM 335
+RKG W+ EEDE+L+
Sbjct: 251 MRKGPWTDEEDEQLV 295
>gb|CN126656.1|CN126656 RHOH1_18_A02.g1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_18_A02_A002 5', mRNA sequence
Length = 780
Score = 122 bits (261), Expect(2) = 1e-028
Identities = 53/115 (46%), Positives = 69/115 (60%)
Frame = +3 / +2
Query: 381 KLAGLQRCGKSCRLRWINYLRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTD 560
+ AGL+R GKSCRLRW+NYL P L+RG DEE I+ELHA G+RWS+IA LPGRTD
Sbjct: 272 RAAGLRRTGKSCRLRWVNYLHPGLRRGRITADEERRIVELHAQWGSRWSRIARSLPGRTD 451
Query: 561 NEIKNLWNSCIKKKLRQKGIDPNTHKPLTEADHGGAAPTISTERTSGSSDINPSS 725
NEIKN W + +KK ++ +T A+ + S S +P+S
Sbjct: 452 NEIKNFWRTRTRKKALEERRAAGAAAAVTATAEPAASSSSSVTMISECRPGSPNS 616
Score = 55.6 bits (115), Expect = 3e-006
Identities = 31/74 (41%), Positives = 36/74 (48%)
Frame = -3 / -1
Query: 604 SFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANAPLLRSGLR*FIH 425
+FFL+ +FLISLSV PG A+ DHL P A S P R G R*F H
Sbjct: 495 AFFLVLVLQKFLISLSVRPGKLLAMRDHLLPHCAWSSTMRRSSSAVMRPRRRPGWR*FTH 316
Query: 424 LSLQLFPHL*SPAS 383
QL P PA+
Sbjct: 315 RRRQLLPVRRRPAA 274
Score = 41.8 bits (85), Expect = 0.036
Identities = 22/69 (31%), Positives = 33/69 (47%)
Frame = -2 / -3
Query: 611 LPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECPSLEVWPQIV 432
L LL P +LDL++ Q + RPP V+L D V G+ S E ++V
Sbjct: 502 LESLLPGPCPPEVLDLVVGASGQAPGDARPPASPLRVELHDASLLVGGDAASPEARVEVV 323
Query: 431 YPPQPTTLS 405
+PP+ L+
Sbjct: 322 HPPEAAALA 296
Score = 27.2 bits (53), Expect(2) = 1e-028
Identities = 9/15 (60%), Positives = 13/15 (86%)
Frame = +3 / +3
Query: 291 LRKGLWSPEEDEKLM 335
+RKG W+ EEDE+L+
Sbjct: 240 MRKGPWTDEEDEQLV 284
>gb|CN141027.1|CN141027 OX1_48_H05.g1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_48_H05_A002 5', mRNA sequence
Length = 610
Score = 122 bits (261), Expect(2) = 1e-028
Identities = 53/115 (46%), Positives = 69/115 (60%)
Frame = +3 / +1
Query: 381 KLAGLQRCGKSCRLRWINYLRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTD 560
+ AGL+R GKSCRLRW+NYL P L+RG DEE I+ELHA G+RWS+IA LPGRTD
Sbjct: 265 RAAGLRRTGKSCRLRWVNYLHPGLRRGRITADEERRIVELHAQWGSRWSRIARSLPGRTD 444
Query: 561 NEIKNLWNSCIKKKLRQKGIDPNTHKPLTEADHGGAAPTISTERTSGSSDINPSS 725
NEIKN W + +KK ++ +T A+ + S S +P+S
Sbjct: 445 NEIKNFWRTRTRKKALEERRAAGAAAAVTATAEPAASSSSSVTMISECRPGSPNS 609
Score = 55.6 bits (115), Expect = 3e-006
Identities = 31/74 (41%), Positives = 36/74 (48%)
Frame = -3 / -3
Query: 604 SFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANAPLLRSGLR*FIH 425
+FFL+ +FLISLSV PG A+ DHL P A S P R G R*F H
Sbjct: 488 AFFLVLVLQKFLISLSVRPGKLLAMRDHLLPHCAWSSTMRRSSSAVMRPRRRPGWR*FTH 309
Query: 424 LSLQLFPHL*SPAS 383
QL P PA+
Sbjct: 308 RRRQLLPVRRRPAA 267
Score = 41.8 bits (85), Expect = 0.036
Identities = 22/69 (31%), Positives = 33/69 (47%)
Frame = -2 / -2
Query: 611 LPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECPSLEVWPQIV 432
L LL P +LDL++ Q + RPP V+L D V G+ S E ++V
Sbjct: 495 LESLLPGPCPPEVLDLVVGASGQAPGDARPPASPLRVELHDASLLVGGDAASPEARVEVV 316
Query: 431 YPPQPTTLS 405
+PP+ L+
Sbjct: 315 HPPEAAALA 289
Score = 27.2 bits (53), Expect(2) = 1e-028
Identities = 9/15 (60%), Positives = 13/15 (86%)
Frame = +3 / +2
Query: 291 LRKGLWSPEEDEKLM 335
+RKG W+ EEDE+L+
Sbjct: 233 MRKGPWTDEEDEQLV 277
>gb|CW247980.1|CW247980 104_709_11222049_148_35027_045 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11222049, DNA
sequence
Length = 675
Score = 91.8 bits (194), Expect(2) = 1e-028
Identities = 36/56 (64%), Positives = 43/56 (76%)
Frame = +3 / -3
Query: 387 AGLQRCGKSCRLRWINYLRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGR 554
AGL+RCGKSCRLRW+NYLRP++KRG + DEEDLII LH +LGNR + GR
Sbjct: 280 AGLRRCGKSCRLRWLNYLRPNIKRGNISYDEEDLIIRLHKLLGNRSVSVVRAGGGR 113
Score = 62.5 bits (130), Expect(3) = 6e-015
Identities = 21/41 (51%), Positives = 31/41 (75%)
Frame = -2 / +2
Query: 521 PVPEDSVQLDDEVFFVLGECPSLEVWPQIVYPPQPTTLSAP 399
PV E+ V+ DDE+ V+G+ +L+VWP++V PPQP L+AP
Sbjct: 146 PVAEELVEADDEILLVVGDVAALDVWPEVVQPPQPAALAAP 268
Score = 61.1 bits (127), Expect(2) = 1e-028
Identities = 20/46 (43%), Positives = 31/46 (67%)
Frame = +3 / -3
Query: 255 EMGRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAG 392
EMGR +CC K+ +++G W+ +ED+ L ++ HG G W VP+ AG
Sbjct: 556 EMGRRACCAKEGVKRGAWTAKEDDVLAAYVKAHGEGKWREVPQKAG 419
Score = 51.5 bits (106), Expect(2) = 4e-008
Identities = 19/25 (76%), Positives = 20/25 (80%)
Frame = +3 / -1
Query: 510 LGNRWSQIAAQLPGRTDNEIKNLWN 584
L RWS IA +LPGRTDNEIKN WN
Sbjct: 75 LAGRWSLIAGRLPGRTDNEIKNYWN 1
Score = 33.6 bits (67), Expect(3) = 6e-015
Identities = 16/22 (72%), Positives = 16/22 (72%)
Frame = -3 / +2
Query: 583 FHRFLISLSVLPGSCAAI*DHL 518
F FLISLSV PGS AI DHL
Sbjct: 2 FQ*FLISLSVRPGSLPAISDHL 67
Score = 30.4 bits (60), Expect(3) = 6e-015
Identities = 17/43 (39%), Positives = 22/43 (51%)
Frame = -2 / +2
Query: 380 GNRAPAAMAMLCYVIHEFLILLRGPEPLSQLLLVAARMPPHLN 252
G+ P A AM V + ++LL P P L AAR P HL+
Sbjct: 431 GHLPPFAFAMGLDVGGQDVVLLGRPRPSLHAFLGAARSPAHLS 559
Score = 29.0 bits (57), Expect(2) = 8.4
Identities = 14/25 (56%), Positives = 14/25 (56%)
Frame = -3 / +3
Query: 460 PLLRSGLR*FIHLSLQLFPHL*SPA 386
P L G R*F H S QL PH PA
Sbjct: 207 PRLMFGRR*FSHRSRQLLPHRRKPA 281
Score = 28.6 bits (56), Expect(2) = 4e-008
Identities = 14/24 (58%), Positives = 14/24 (58%)
Frame = +1 / -1
Query: 400 GAERVVG*GG*TI*GQTSREGHSP 471
GA R G GG*T GQTS SP
Sbjct: 267 GAARAAGCGG*TTSGQTSSAATSP 196
Score = 25.8 bits (50), Expect(2) = 8.4
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = -2 / +1
Query: 584 VP*ILDLIISPPWQLRCNLRPPVPE 510
VP +LD I+ Q C+ RPP +
Sbjct: 1 VPVVLDFIVCSARQPACDQRPPASQ 75
>gb|CN128796.1|CN128796 RHOH1_31_D08.g1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_31_D08_A002 5', mRNA sequence
Length = 820
Score = 122 bits (260), Expect(2) = 1e-028
Identities = 47/74 (63%), Positives = 56/74 (75%)
Frame = +3 / +3
Query: 381 KLAGLQRCGKSCRLRWINYLRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTD 560
+ AGL+R GKSCRLRW+NYL P L+RG DEE I+ELHA G+RWS+IA LPGRTD
Sbjct: 270 RAAGLRRTGKSCRLRWVNYLHPGLRRGRITADEERRIVELHAQWGSRWSRIARSLPGRTD 449
Query: 561 NEIKNLWNSCIKKK 602
NEIKN W + +KK
Sbjct: 450 NEIKNFWRTRTRKK 491
Score = 55.6 bits (115), Expect = 3e-006
Identities = 31/74 (41%), Positives = 36/74 (48%)
Frame = -3 / -1
Query: 604 SFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANAPLLRSGLR*FIH 425
+FFL+ +FLISLSV PG A+ DHL P A S P R G R*F H
Sbjct: 493 AFFLVLVLQKFLISLSVRPGKLLAMRDHLLPHCAWSSTMRRSSSAVMRPRRRPGWR*FTH 314
Query: 424 LSLQLFPHL*SPAS 383
QL P PA+
Sbjct: 313 RRRQLLPVRRRPAA 272
Score = 41.4 bits (84), Expect = 0.049
Identities = 22/69 (31%), Positives = 33/69 (47%)
Frame = -2 / -3
Query: 611 LPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECPSLEVWPQIV 432
L LL P +LDL++ Q + RPP V+L D V G+ S E ++V
Sbjct: 500 LESLLPGPCPPEVLDLVVGASGQAPGDARPPASPLRVELHDASLLVGGDAASPEARVEVV 321
Query: 431 YPPQPTTLS 405
+PP+ L+
Sbjct: 320 HPPKAAALA 294
Score = 27.2 bits (53), Expect(2) = 1e-028
Identities = 9/15 (60%), Positives = 13/15 (86%)
Frame = +3 / +1
Query: 291 LRKGLWSPEEDEKLM 335
+RKG W+ EEDE+L+
Sbjct: 238 MRKGPWTDEEDEQLV 282
>gb|BE357555.1|BE357555 DG1_21_H10.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 480
Score = 122 bits (260), Expect(2) = 1e-028
Identities = 47/74 (63%), Positives = 56/74 (75%)
Frame = +3 / +3
Query: 381 KLAGLQRCGKSCRLRWINYLRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTD 560
+ AGL+R GKSCRLRW+NYL P L+RG DEE I+ELHA G+RWS+IA LPGRTD
Sbjct: 252 RAAGLRRTGKSCRLRWVNYLHPGLRRGRITADEERRIVELHAQWGSRWSRIARSLPGRTD 431
Query: 561 NEIKNLWNSCIKKK 602
NEIKN W + +KK
Sbjct: 432 NEIKNFWRTRTRKK 473
Score = 55.6 bits (115), Expect = 3e-006
Identities = 31/74 (41%), Positives = 36/74 (48%)
Frame = -3 / -3
Query: 604 SFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANAPLLRSGLR*FIH 425
+FFL+ +FLISLSV PG A+ DHL P A S P R G R*F H
Sbjct: 475 AFFLVLVLQKFLISLSVRPGKLLAMRDHLLPHCAWSSTMRRSSSAVMRPRRRPGWR*FTH 296
Query: 424 LSLQLFPHL*SPAS 383
QL P PA+
Sbjct: 295 RRRQLLPVRRRPAA 254
Score = 41.4 bits (84), Expect = 0.049
Identities = 19/59 (32%), Positives = 30/59 (50%)
Frame = -2 / -2
Query: 581 P*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECPSLEVWPQIVYPPQPTTLS 405
P +LDL++ Q + RPP V+L D V G+ S E ++V+PP+ L+
Sbjct: 452 PEVLDLVVGASGQAPGDARPPASPLRVELHDASLLVGGDAASPEARVEVVHPPEAAALA 276
Score = 27.2 bits (53), Expect(2) = 1e-028
Identities = 9/15 (60%), Positives = 13/15 (86%)
Frame = +3 / +1
Query: 291 LRKGLWSPEEDEKLM 335
+RKG W+ EEDE+L+
Sbjct: 220 MRKGPWTDEEDEQLV 264
>gb|BE357751.1|BE357751 DG1_22_H09.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 480
Score = 122 bits (260), Expect(2) = 1e-028
Identities = 47/74 (63%), Positives = 56/74 (75%)
Frame = +3 / +3
Query: 381 KLAGLQRCGKSCRLRWINYLRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTD 560
+ AGL+R GKSCRLRW+NYL P L+RG DEE I+ELHA G+RWS+IA LPGRTD
Sbjct: 252 RAAGLRRTGKSCRLRWVNYLHPGLRRGRITADEERRIVELHAQWGSRWSRIARSLPGRTD 431
Query: 561 NEIKNLWNSCIKKK 602
NEIKN W + +KK
Sbjct: 432 NEIKNFWRTRTRKK 473
Score = 55.6 bits (115), Expect = 3e-006
Identities = 31/74 (41%), Positives = 36/74 (48%)
Frame = -3 / -3
Query: 604 SFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANAPLLRSGLR*FIH 425
+FFL+ +FLISLSV PG A+ DHL P A S P R G R*F H
Sbjct: 475 AFFLVLVLQKFLISLSVRPGKLLAMRDHLLPHCAWSSTMRRSSSAVMRPRRRPGWR*FTH 296
Query: 424 LSLQLFPHL*SPAS 383
QL P PA+
Sbjct: 295 RRRQLLPVRRRPAA 254
Score = 41.4 bits (84), Expect = 0.049
Identities = 19/59 (32%), Positives = 30/59 (50%)
Frame = -2 / -2
Query: 581 P*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECPSLEVWPQIVYPPQPTTLS 405
P +LDL++ Q + RPP V+L D V G+ S E ++V+PP+ L+
Sbjct: 452 PEVLDLVVGASGQAPGDARPPASPLRVELHDASLLVGGDAASPEARVEVVHPPEAAALA 276
Score = 27.2 bits (53), Expect(2) = 1e-028
Identities = 9/15 (60%), Positives = 13/15 (86%)
Frame = +3 / +1
Query: 291 LRKGLWSPEEDEKLM 335
+RKG W+ EEDE+L+
Sbjct: 220 MRKGPWTDEEDEQLV 264
>gb|CW080152.1|CW080152 104_407_10905722_116_32482_005 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10905722, DNA
sequence
Length = 547
Score = 84.9 bits (179), Expect(2) = 3e-028
Identities = 32/43 (74%), Positives = 36/43 (83%)
Frame = +3 / -3
Query: 387 AGLQRCGKSCRLRWINYLRPDLKRGAFAQDEEDLIIELHAVLG 515
AGL+RCGKSCRLRW NYLRPD+KRG F EE II+LHA+LG
Sbjct: 131 AGLRRCGKSCRLRWTNYLRPDIKRGKFTLQEEQTIIQLHALLG 3
Score = 63.4 bits (132), Expect(2) = 3e-028
Identities = 23/43 (53%), Positives = 30/43 (69%)
Frame = +3 / -3
Query: 273 CCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQR 401
C + L+KG W+PEED+KL+ I +HGHGCW S+P AG R
Sbjct: 347 CEKEAGLKKGPWTPEEDQKLLAFIEQHGHGCWRSLPAKAGENR 219
Score = 47.3 bits (97), Expect(3) = 2e-010
Identities = 19/41 (46%), Positives = 28/41 (68%)
Frame = -2 / +3
Query: 512 EDSVQLDDEVFFVLGECPSLEVWPQIVYPPQPTTLSAPLKP 390
E+SV+LDD + + E L+V PQ+V PP+P L+AP +P
Sbjct: 6 EESVELDDGLLLLERELAPLDVRPQVVGPPEPAALAAPPQP 128
Score = 35.9 bits (72), Expect = 2.2
Identities = 19/43 (44%), Positives = 20/43 (46%)
Frame = -3 / +1
Query: 514 PRTACXXXXXXXXSWANAPLLRSGLR*FIHLSLQLFPHL*SPA 386
PR A N P L SG R* +H S QL PH SPA
Sbjct: 4 PRRAWSWMMVCSSWSVNLPRLMSGRR*LVHRSRQLLPHRRSPA 132
Score = 33.6 bits (67), Expect(3) = 2e-010
Identities = 12/18 (66%), Positives = 13/18 (72%)
Frame = -3 / +1
Query: 394 SPASLGTELQQPWPCFVM 341
SPA G+E QQPWPC M
Sbjct: 226 SPALAGSERQQPWPCCSM 279
Score = 23.5 bits (45), Expect(3) = 2e-010
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = -2 / +3
Query: 299 LSQLLLVAARMPPH 258
L LL+AAR PPH
Sbjct: 324 LQPCLLLAARRPPH 365
>gb|CX612627.1|CX612627 GABR1_3_C04.g1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_3_C04_A002 5', mRNA sequence
Length = 742
Score = 116 bits (248), Expect(2) = 4e-028
Identities = 44/67 (65%), Positives = 52/67 (77%)
Frame = +3 / +3
Query: 387 AGLQRCGKSCRLRWINYLRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNE 566
AGL+R GKSCRLRW+NYL P L+RG DEE LI++LH G+RWS+IA LPGRTDNE
Sbjct: 534 AGLRRTGKSCRLRWVNYLHPGLRRGRITADEERLILQLHEQWGSRWSRIARSLPGRTDNE 713
Query: 567 IKNLWNS 587
IKN W +
Sbjct: 714 IKNFWRT 734
Score = 44.1 bits (90), Expect = 0.007
Identities = 20/56 (35%), Positives = 30/56 (53%)
Frame = -2 / -3
Query: 590 ARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECPSLEVWPQIVYPP 423
AR P +LDL++ P Q + RPP V+L D+ V G+ + E ++V PP
Sbjct: 737 ARPPEVLDLVVGAPGQAPSDARPPAAPLLVELQDQALLVGGDAAAPEPRVEVVDPP 570
Score = 40.5 bits (82), Expect = 0.092
Identities = 26/74 (35%), Positives = 30/74 (40%)
Frame = -3 / -1
Query: 595 LMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANAPLLRSGLR*FIHLSL 416
L +FLISLSV PG A+ DH P + S P G R* H
Sbjct: 742 LARVLQKFLISLSVRPGRLLAMRDHRLPHCSWSCRIRRSSSAVMRPRRSPGWR*LTHRRR 563
Query: 415 QLFPHL*SPASLGT 374
QL P PA + T
Sbjct: 562 QLLPVRLRPAYIST 521
Score = 35.0 bits (70), Expect(2) = 4e-028
Identities = 14/39 (35%), Positives = 23/39 (58%)
Frame = +3 / +2
Query: 291 LRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCG 407
+RKG W+ EED +L+ + G W + K++GL+ G
Sbjct: 248 MRKGPWTEEEDAQLVWFVRLFGERRWDFLAKVSGLRGGG 364
>gb|CX613554.1|CX613554 GABR1_8_G08.g1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_8_G08_A002 5', mRNA sequence
Length = 762
Score = 116 bits (248), Expect(2) = 4e-028
Identities = 44/67 (65%), Positives = 52/67 (77%)
Frame = +3 / +3
Query: 387 AGLQRCGKSCRLRWINYLRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNE 566
AGL+R GKSCRLRW+NYL P L+RG DEE LI++LH G+RWS+IA LPGRTDNE
Sbjct: 552 AGLRRTGKSCRLRWVNYLHPGLRRGRITADEERLILQLHEQWGSRWSRIARSLPGRTDNE 731
Query: 567 IKNLWNS 587
IKN W +
Sbjct: 732 IKNFWRT 752
Score = 44.1 bits (90), Expect = 0.007
Identities = 20/56 (35%), Positives = 30/56 (53%)
Frame = -2 / -2
Query: 590 ARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECPSLEVWPQIVYPP 423
AR P +LDL++ P Q + RPP V+L D+ V G+ + E ++V PP
Sbjct: 755 ARPPEVLDLVVGAPGQAPSDARPPAAPLLVELQDQALLVGGDAAAPEPRVEVVDPP 588
Score = 40.5 bits (82), Expect = 0.092
Identities = 26/74 (35%), Positives = 30/74 (40%)
Frame = -3 / -3
Query: 595 LMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANAPLLRSGLR*FIHLSL 416
L +FLISLSV PG A+ DH P + S P G R* H
Sbjct: 760 LARVLQKFLISLSVRPGRLLAMRDHRLPHCSWSCRIRRSSSAVMRPRRSPGWR*LTHRRR 581
Query: 415 QLFPHL*SPASLGT 374
QL P PA + T
Sbjct: 580 QLLPVRLRPAYIST 539
Score = 35.0 bits (70), Expect(2) = 4e-028
Identities = 14/39 (35%), Positives = 23/39 (58%)
Frame = +3 / +1
Query: 291 LRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCG 407
+RKG W+ EED +L+ + G W + K++GL+ G
Sbjct: 265 MRKGPWTEEEDAQLVWFVRLFGERRWDFLAKVSGLRGGG 381
>gb|CW032214.1|CW032214 104_261_10501251_114_30363 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10501251, DNA
sequence
Length = 682
Score = 127 bits (273), Expect = 4e-028
Identities = 50/84 (59%), Positives = 63/84 (75%)
Frame = +3 / +2
Query: 387 AGLQRCGKSCRLRWINYLRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNE 566
AGL+R GKSCRLRW+NYLRPDL+RG E+ LI+ELH+ GNRWS+IA LPGRTDNE
Sbjct: 362 AGLKRTGKSCRLRWLNYLRPDLRRGNITPQEQLLILELHSRWGNRWSKIAQHLPGRTDNE 541
Query: 567 IKNLWNSCIKKKLRQKGIDPNTHK 638
IKN W + ++K +Q D N+ +
Sbjct: 542 IKNYWRTRVQKHAKQLKCDVNSQQ 613
Score = 61.6 bits (128), Expect = 4e-008
Identities = 35/84 (41%), Positives = 38/84 (45%)
Frame = -3 / -2
Query: 634 WVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANAPL 455
W+L S CL+ F FLISLSV PG C AI D P+ C P
Sbjct: 609 WLLTSHLSCLACFCTRVRQ*FLISLSVRPGRCCAILDQRLPQRECSSRMSSCSCGVMLPR 430
Query: 454 LRSGLR*FIHLSLQLFPHL*SPAS 383
RSG R* H QL P SPAS
Sbjct: 429 RRSGRR*LSHRRRQLLPVRFSPAS 358
Score = 56.5 bits (117), Expect = 1e-006
Identities = 28/83 (33%), Positives = 46/83 (55%)
Frame = -2 / -1
Query: 638 LVGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECP 459
L+ V + L +LL AR P +LDL++ P ++ +L P V VQL DE + +
Sbjct: 613 LLAVDVALELLGVLLHARAPVVLDLVVGAPREVLRDLGPAVAPARVQLQDEQLLLRRDVA 434
Query: 458 SLEVWPQIVYPPQPTTLSAPLKP 390
+ EV ++V PP+ L++ L+P
Sbjct: 433 APEVRAEVVEPPEAAALASALQP 365
>gb|CW218568.1|CW218568 104_652_11196258_148_37530_075 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11196258, DNA
sequence
Length = 428
Score = 90.9 bits (192), Expect(2) = 6e-028
Identities = 33/45 (73%), Positives = 40/45 (88%)
Frame = +3 / -1
Query: 390 GLQRCGKSCRLRWINYLRPDLKRGAFAQDEEDLIIELHAVLGNRW 524
GL RCGKSCR+RWINYLRPD+KRG F DEE+ II+LHA+LGN++
Sbjct: 413 GLLRCGKSCRMRWINYLRPDMKRGNFTADEEETIIKLHAMLGNKY 279
Score = 59.3 bits (123), Expect(2) = 6e-028
Identities = 21/34 (61%), Positives = 29/34 (85%)
Frame = +3 / -2
Query: 519 RWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGI 620
RWS+IA+ LPGRTDNEIKN+WN+ +KK++ G+
Sbjct: 130 RWSKIASCLPGRTDNEIKNVWNTHLKKRVSPAGV 29
Score = 40.9 bits (83), Expect(2) = 8e-006
Identities = 18/40 (45%), Positives = 23/40 (57%)
Frame = -2 / +3
Query: 518 VPEDSVQLDDEVFFVLGECPSLEVWPQIVYPPQPTTLSAP 399
V E V+LDD + V GE +L V ++V PP P L AP
Sbjct: 285 VAEHGVELDDGLLLVGGEIAALHVRAEVVDPPHPAALPAP 404
Score = 34.1 bits (68), Expect(2) = 0.010
Identities = 16/22 (72%), Positives = 16/22 (72%)
Frame = -3 / +3
Query: 583 FHRFLISLSVLPGSCAAI*DHL 518
F FLISLSVLPG AI DHL
Sbjct: 66 FQTFLISLSVLPGRHDAILDHL 131
Score = 34.1 bits (68), Expect(2) = 8e-006
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = -2 / +2
Query: 599 LLDARVP*ILDLIISPPWQLRCNLRPP 519
LL RVP +LDL++ P Q R +L PP
Sbjct: 50 LLQVRVPDVLDLVVRPARQARRDLGPP 130
Score = 30.4 bits (60), Expect(2) = 0.010
Identities = 17/45 (37%), Positives = 18/45 (40%)
Frame = -3 / +1
Query: 523 HLFPRTACXXXXXXXXSWANAPLLRSGLR*FIHLSLQLFPHL*SP 389
+L P A S P SG R* IH QLFPH P
Sbjct: 280 YLLPSMAWSLMMVSSSSAVKLPRFMSGRR*LIHRIRQLFPHRSKP 414
>gb|CW172958.1|CW172958 104_584_11156580_148_36547_042 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11156580, DNA
sequence
Length = 646
Score = 127 bits (272), Expect = 6e-028
Identities = 45/86 (52%), Positives = 64/86 (74%)
Frame = +3 / +3
Query: 288 KLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRGAF 467
+LRKG W+P+ED++L ++ HG G W+ V + AGL RCGKSCRLRW N+LRPDLK+G F
Sbjct: 267 ELRKGPWTPDEDKRLKTYVEAHGEGNWNKVQRNAGLNRCGKSCRLRWANHLRPDLKKGPF 446
Query: 468 AQDEEDLIIELHAVLGNRWSQIAAQL 545
+E D II H + GN+W+++A+ +
Sbjct: 447 DAEEVDKIIRFHIMWGNKWAKMASHV 524
Score = 40.0 bits (81), Expect = 0.13
Identities = 25/62 (40%), Positives = 26/62 (41%)
Frame = -3 / -1
Query: 535 AI*DHLFPRTACXXXXXXXXSWANAPLLRSGLR*FIHLSLQLFPHL*SPASLGTELQQPW 356
AI HL P S + P LRSGLR F QL P SPA T Q P
Sbjct: 514 AILAHLLPHMM*NLMILSTSSASKGPFLRSGLRWFAQRRRQLLPQRLSPAFRCTLFQFPS 335
Query: 355 PC 350
PC
Sbjct: 334 PC 329
>gb|CW492388.1|CW492388 fsbb001f282k10f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f282k10, DNA
sequence
Length = 702
Score = 127 bits (272), Expect = 6e-028
Identities = 45/86 (52%), Positives = 64/86 (74%)
Frame = +3 / +2
Query: 288 KLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRGAF 467
+LRKG W+P+ED++L ++ HG G W+ V + AGL RCGKSCRLRW N+LRPDLK+G F
Sbjct: 434 ELRKGPWTPDEDKRLKTYVEAHGEGNWNKVQRNAGLNRCGKSCRLRWANHLRPDLKKGPF 613
Query: 468 AQDEEDLIIELHAVLGNRWSQIAAQL 545
+E D II H + GN+W+++A+ +
Sbjct: 614 DAEEVDKIIRFHIMWGNKWAKMASHV 691
Score = 40.0 bits (81), Expect = 0.13
Identities = 25/62 (40%), Positives = 26/62 (41%)
Frame = -3 / -1
Query: 535 AI*DHLFPRTACXXXXXXXXSWANAPLLRSGLR*FIHLSLQLFPHL*SPASLGTELQQPW 356
AI HL P S + P LRSGLR F QL P SPA T Q P
Sbjct: 681 AILAHLLPHMM*NLMILSTSSASKGPFLRSGLRWFAQRRRQLLPQRLSPAFRCTLFQFPS 502
Query: 355 PC 350
PC
Sbjct: 501 PC 496
>gb|CW492389.1|CW492389 fsbb001f282k10k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f282k10, DNA
sequence
Length = 824
Score = 127 bits (272), Expect = 6e-028
Identities = 45/86 (52%), Positives = 64/86 (74%)
Frame = +3 / -2
Query: 288 KLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRGAF 467
+LRKG W+P+ED++L ++ HG G W+ V + AGL RCGKSCRLRW N+LRPDLK+G F
Sbjct: 505 ELRKGPWTPDEDKRLKTYVEAHGEGNWNKVQRNAGLNRCGKSCRLRWANHLRPDLKKGPF 326
Query: 468 AQDEEDLIIELHAVLGNRWSQIAAQL 545
+E D II H + GN+W+++A+ +
Sbjct: 325 DAEEVDKIIRFHIMWGNKWAKMASHV 248
Score = 40.0 bits (81), Expect = 0.13
Identities = 25/62 (40%), Positives = 26/62 (41%)
Frame = -3 / +3
Query: 535 AI*DHLFPRTACXXXXXXXXSWANAPLLRSGLR*FIHLSLQLFPHL*SPASLGTELQQPW 356
AI HL P S + P LRSGLR F QL P SPA T Q P
Sbjct: 258 AILAHLLPHMM*NLMILSTSSASKGPFLRSGLRWFAQRRRQLLPQRLSPAFRCTLFQFPS 437
Query: 355 PC 350
PC
Sbjct: 438 PC 443
>gb|CW419931.1|CW419931 fsbb001f126a07k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f126a07, DNA
sequence
Length = 705
Score = 105 bits (223), Expect(2) = 7e-028
Identities = 39/55 (70%), Positives = 44/55 (80%)
Frame = +3 / +1
Query: 360 GCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRGAFAQDEEDLIIELHAVLGNRW 524
G W ++PK AGL RCGKSCRLRW NYLRPD+KRG F DEE LII LHA LGN++
Sbjct: 511 GSWRNLPKAAGLNRCGKSCRLRWTNYLRPDIKRGNFTDDEESLIIRLHAQLGNKY 675
Score = 41.8 bits (85), Expect(2) = 7e-028
Identities = 13/28 (46%), Positives = 19/28 (67%)
Frame = +3 / +1
Query: 273 CCYKQKLRKGLWSPEEDEKLMNHITKHG 356
CC+ ++KG W+ EED L+ HI +HG
Sbjct: 418 CCHDAGVKKGPWTEEEDRALVEHIQRHG 501
>gb|CW203051.1|CW203051 104_629_11185423_148_36910_024 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11185423, DNA
sequence
Length = 651
Score = 105 bits (223), Expect(2) = 7e-028
Identities = 39/55 (70%), Positives = 44/55 (80%)
Frame = +3 / +3
Query: 360 GCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRGAFAQDEEDLIIELHAVLGNRW 524
G W ++PK AGL RCGKSCRLRW NYLRPD+KRG F DEE LII LHA LGN++
Sbjct: 453 GSWRNLPKAAGLNRCGKSCRLRWTNYLRPDIKRGNFTDDEESLIIRLHAQLGNKY 617
Score = 41.8 bits (85), Expect(2) = 7e-028
Identities = 13/28 (46%), Positives = 19/28 (67%)
Frame = +3 / +3
Query: 273 CCYKQKLRKGLWSPEEDEKLMNHITKHG 356
CC+ ++KG W+ EED L+ HI +HG
Sbjct: 360 CCHDAGVKKGPWTEEEDRALVEHIQRHG 443
>gb|CW347401.1|CW347401 fsbb001f007e18k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f007e18, DNA
sequence
Length = 586
Score = 105 bits (223), Expect(2) = 7e-028
Identities = 39/55 (70%), Positives = 44/55 (80%)
Frame = +3 / +2
Query: 360 GCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRGAFAQDEEDLIIELHAVLGNRW 524
G W ++PK AGL RCGKSCRLRW NYLRPD+KRG F DEE LII LHA LGN++
Sbjct: 383 GSWRNLPKAAGLNRCGKSCRLRWTNYLRPDIKRGNFTDDEESLIIRLHAQLGNKY 547
Score = 41.8 bits (85), Expect(2) = 7e-028
Identities = 13/28 (46%), Positives = 19/28 (67%)
Frame = +3 / +2
Query: 273 CCYKQKLRKGLWSPEEDEKLMNHITKHG 356
CC+ ++KG W+ EED L+ HI +HG
Sbjct: 290 CCHDAGVKKGPWTEEEDRALVEHIQRHG 373
>gb|CW176930.1|CW176930 104_590_11158749_116_36594_095 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11158749, DNA
sequence
Length = 559
Score = 105 bits (223), Expect(2) = 7e-028
Identities = 39/55 (70%), Positives = 44/55 (80%)
Frame = +3 / -2
Query: 360 GCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRGAFAQDEEDLIIELHAVLGNRW 524
G W ++PK AGL RCGKSCRLRW NYLRPD+KRG F DEE LII LHA LGN++
Sbjct: 300 GSWRNLPKAAGLNRCGKSCRLRWTNYLRPDIKRGNFTDDEESLIIRLHAQLGNKY 136
Score = 41.8 bits (85), Expect(2) = 7e-028
Identities = 13/28 (46%), Positives = 19/28 (67%)
Frame = +3 / -2
Query: 273 CCYKQKLRKGLWSPEEDEKLMNHITKHG 356
CC+ ++KG W+ EED L+ HI +HG
Sbjct: 393 CCHDAGVKKGPWTEEEDRALVEHIQRHG 310
>gb|CW219776.1|CW219776 104_654_11196977_148_37146_077 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11196977, DNA
sequence
Length = 530
Score = 105 bits (223), Expect(2) = 7e-028
Identities = 39/55 (70%), Positives = 44/55 (80%)
Frame = +3 / -3
Query: 360 GCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRGAFAQDEEDLIIELHAVLGNRW 524
G W ++PK AGL RCGKSCRLRW NYLRPD+KRG F DEE LII LHA LGN++
Sbjct: 258 GSWRNLPKAAGLNRCGKSCRLRWTNYLRPDIKRGNFTDDEESLIIRLHAQLGNKY 94
Score = 41.8 bits (85), Expect(2) = 7e-028
Identities = 13/28 (46%), Positives = 19/28 (67%)
Frame = +3 / -3
Query: 273 CCYKQKLRKGLWSPEEDEKLMNHITKHG 356
CC+ ++KG W+ EED L+ HI +HG
Sbjct: 351 CCHDAGVKKGPWTEEEDRALVEHIQRHG 268
>gb|CW347400.1|CW347400 fsbb001f007e18f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f007e18, DNA
sequence
Length = 361
Score = 105 bits (223), Expect(2) = 7e-028
Identities = 39/55 (70%), Positives = 44/55 (80%)
Frame = +3 / -1
Query: 360 GCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRGAFAQDEEDLIIELHAVLGNRW 524
G W ++PK AGL RCGKSCRLRW NYLRPD+KRG F DEE LII LHA LGN++
Sbjct: 202 GSWRNLPKAAGLNRCGKSCRLRWTNYLRPDIKRGNFTDDEESLIIRLHAQLGNKY 38
Score = 41.8 bits (85), Expect(2) = 7e-028
Identities = 13/28 (46%), Positives = 19/28 (67%)
Frame = +3 / -1
Query: 273 CCYKQKLRKGLWSPEEDEKLMNHITKHG 356
CC+ ++KG W+ EED L+ HI +HG
Sbjct: 295 CCHDAGVKKGPWTEEEDRALVEHIQRHG 212
>gb|CW306377.1|CW306377 104_792_11466808_148_35716_064 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11466808, DNA
sequence
Length = 760
Score = 84.5 bits (178), Expect(2) = 2e-027
Identities = 29/46 (63%), Positives = 38/46 (82%)
Frame = +3 / -1
Query: 384 LAGLQRCGKSCRLRWINYLRPDLKRGAFAQDEEDLIIELHAVLGNR 521
+ GL RCGKSCRLRW NYLRPD+KRG F +E + I++LHA++GN+
Sbjct: 205 IPGLNRCGKSCRLRWTNYLRPDIKRGPFTPEEHNSILQLHAIVGNK 68
Score = 60.6 bits (126), Expect(2) = 2e-027
Identities = 21/45 (46%), Positives = 32/45 (71%)
Frame = +3 / -1
Query: 258 MGRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAG 392
MGR CC + ++KG W+PEED+ L++++ +G G W +PKLAG
Sbjct: 457 MGRTPCCDSKGIKKGPWAPEEDKLLVDYVQANGTGNWRMLPKLAG 323
Score = 43.7 bits (89), Expect = 0.010
Identities = 21/43 (48%), Positives = 25/43 (58%)
Frame = -2 / +2
Query: 386 EFGNRAPAAMAMLCYVIHEFLILLRGPEPLSQLLLVAARMPPH 258
E G AP A ++ V+ E L+LL P PL L VAAR PPH
Sbjct: 329 ELGEHAPVAGSVGLDVVDEQLVLLGRPWPLLDALAVAARSPPH 457
Score = 36.8 bits (74), Expect = 1.2
Identities = 19/43 (44%), Positives = 24/43 (55%)
Frame = +1 / -2
Query: 259 WGGILAATSRS*ERGSGPLRRMRNS*IT*QSMAMAAGALFPNS 387
WGG+ AAT+R+ RG G RR S T + A GA P+S
Sbjct: 456 WGGLRAATARASRRGHGRPRRTSCSSTTSRPTEPATGACSPSS 328
>gb|CW389572.1|CW389572 fsbb001f074n05f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f074n05, DNA
sequence
Length = 593
Score = 84.5 bits (178), Expect(2) = 2e-027
Identities = 29/46 (63%), Positives = 38/46 (82%)
Frame = +3 / -1
Query: 384 LAGLQRCGKSCRLRWINYLRPDLKRGAFAQDEEDLIIELHAVLGNR 521
+ GL RCGKSCRLRW NYLRPD+KRG F +E + I++LHA++GN+
Sbjct: 278 IPGLNRCGKSCRLRWTNYLRPDIKRGPFTPEEHNSILQLHAIVGNK 141
Score = 60.6 bits (126), Expect(2) = 2e-027
Identities = 21/45 (46%), Positives = 32/45 (71%)
Frame = +3 / -1
Query: 258 MGRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAG 392
MGR CC + ++KG W+PEED+ L++++ +G G W +PKLAG
Sbjct: 530 MGRTPCCDSKGIKKGPWAPEEDKLLVDYVQANGTGNWRMLPKLAG 396
Score = 43.7 bits (89), Expect = 0.010
Identities = 21/43 (48%), Positives = 25/43 (58%)
Frame = -2 / +3
Query: 386 EFGNRAPAAMAMLCYVIHEFLILLRGPEPLSQLLLVAARMPPH 258
E G AP A ++ V+ E L+LL P PL L VAAR PPH
Sbjct: 402 ELGEHAPVAGSVGLDVVDEQLVLLGRPWPLLDALAVAARSPPH 530
Score = 36.8 bits (74), Expect = 1.2
Identities = 19/43 (44%), Positives = 24/43 (55%)
Frame = +1 / -2
Query: 259 WGGILAATSRS*ERGSGPLRRMRNS*IT*QSMAMAAGALFPNS 387
WGG+ AAT+R+ RG G RR S T + A GA P+S
Sbjct: 529 WGGLRAATARASRRGHGRPRRTSCSSTTSRPTEPATGACSPSS 401
>gb|CW316832.1|CW316832 104_808_11473099_148_35857_074 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11473099, DNA
sequence
Length = 586
Score = 78.0 bits (164), Expect(3) = 3e-027
Identities = 33/50 (66%), Positives = 36/50 (72%)
Frame = +3 / +1
Query: 372 SVPKLAGLQRCGKSCRLRWINYLRPDLKRGAFAQDEEDLIIELHAVLGNR 521
SV AGL R GKSCRLRW+NYL P LKRG + EE LI+ELHA GNR
Sbjct: 283 SVSFQAGLNRTGKSCRLRWVNYLHPGLKRGRMSPHEERLILELHARWGNR 432
Score = 50.6 bits (104), Expect(3) = 3e-027
Identities = 18/22 (81%), Positives = 20/22 (90%)
Frame = +3 / +1
Query: 516 NRWSQIAAQLPGRTDNEIKNLW 581
NRWS+IA +LPGRTDNEIKN W
Sbjct: 517 NRWSRIARRLPGRTDNEIKNYW 582
Score = 34.1 bits (68), Expect(3) = 3e-027
Identities = 12/39 (30%), Positives = 24/39 (61%)
Frame = +3 / +3
Query: 282 KQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQ 398
+++ RKG W+ +ED +L+ + G W + K++GL+
Sbjct: 60 REETRKGPWTEQEDLQLVCTVRLFGERRWDFIAKVSGLR 176
Score = 32.7 bits (65), Expect(2) = 0.003
Identities = 15/20 (75%), Positives = 15/20 (75%)
Frame = -3 / -3
Query: 574 FLISLSVLPGSCAAI*DHLF 515
FLISLSV PG AI DHLF
Sbjct: 575 FLISLSVRPGKRRAILDHLF 516
Score = 30.9 bits (61), Expect(2) = 0.003
Identities = 20/50 (40%), Positives = 20/50 (40%)
Frame = -3 / -3
Query: 520 LFPRTACXXXXXXXXSWANAPLLRSGLR*FIHLSLQLFPHL*SPASLGTE 371
LFP AC P LR G R* S QL P SPA TE
Sbjct: 431 LFPHRACSSRMRRSSWGDMRPRLRPG*R*LTQRSRQLLPVRLSPA*KDTE 282
>gb|CW119829.1|CW119829 104_497_11108982_148_34645_031 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11108982, DNA
sequence
Length = 494
Score = 105 bits (225), Expect(3) = 3e-027
Identities = 46/83 (55%), Positives = 54/83 (65%)
Frame = +3 / -2
Query: 1335 SFAETTTVMQNQSQTLYDDVIKAESQFNIEGICASWFXXXXXXXXXXVAPDMYDKDLQRM 1514
+F +T MQN SQ+LY+DVIKAESQFNIEG+CA+W V D+YDKDLQRM
Sbjct: 418 TFTDTPATMQNLSQSLYEDVIKAESQFNIEGLCAAWSQNLQPQQHLQVVSDLYDKDLQRM 239
Query: 1515 QLSFENI*ALCSTTWNRADQKKQ 1583
LSFENI*A C QK +
Sbjct: 238 SLSFENI*ATCCMQGTEK*QKAE 170
Score = 84.5 bits (178), Expect(2) = 6e-016
Identities = 42/70 (60%), Positives = 46/70 (65%)
Frame = -3 / +3
Query: 1552 VEHNA*IFSKDSCILCKSLSYMSGATXXXXXXX*FWNQEAHIPSMLNWLSALITSS*SVW 1373
++H A*IFSKD ILCKSLSY S T F +Q A PSMLNWLSALITSS S W
Sbjct: 201 MQHVA*IFSKDKDILCKSLSYKSDTTCRCCCGCRF*DQAAQRPSMLNWLSALITSSYSDW 380
Query: 1372 LWFCMTVVVS 1343
L FC+ VS
Sbjct: 381 LRFCIVAGVS 410
Score = 81.3 bits (171), Expect = 5e-014
Identities = 37/65 (56%), Positives = 43/65 (66%)
Frame = +1 / -3
Query: 1354 QSCRTRAKRFMMM*SRQRANST*KGYVLLGSRISSHSNSCR*HQTCMTRTCKECNYLLRI 1533
Q CR A M S+ RANST*+ V G +I SHSN CR*+Q CMTR C+EC LLRI
Sbjct: 399 QRCRILASHCTKMLSKPRANST*RASVQPGLKICSHSNICR*YQICMTRICRECPCLLRI 220
Query: 1534 SRHYV 1548
SR +V
Sbjct: 219 SRQHV 205
Score = 71.6 bits (150), Expect = 4e-011
Identities = 33/64 (51%), Positives = 38/64 (59%)
Frame = +2 / -1
Query: 1361 AEPEPNAL**CDQGREPIQHRRDMCFLVPESXXXXXXXGSTRHV*QGLAKNATIF*EYLG 1540
AE P + C Q REPIQHR +C LV +S GS R V*QG A+N +F*EYLG
Sbjct: 392 AES*PVTVRRCYQSREPIQHRGPLCSLVSKSAATATSAGSIRFV*QGFAENVLVF*EYLG 213
Query: 1541 IMFH 1552
M H
Sbjct: 212 NMLH 201
Score = 62.0 bits (129), Expect = 3e-008
Identities = 32/65 (49%), Positives = 38/65 (58%)
Frame = -2 / +2
Query: 1547 T*CLDILKR*LHSLQVLVIHVWCYXXXXXXXXXLEPRSTYPFYVELALCLDHIIIKRLAL 1368
T CLDILKR HSLQ+LVI + Y L P T YVELAL D+I ++ LA
Sbjct: 206 TCCLDILKRQGHSLQILVIQI*YYLQMLLWLQILRPGCTEALYVELALGFDNIFVQ*LAK 385
Query: 1367 VLHDC 1353
+LH C
Sbjct: 386 ILHRC 400
Score = 61.6 bits (128), Expect = 4e-008
Identities = 31/63 (49%), Positives = 36/63 (57%)
Frame = -1 / +1
Query: 1548 NIMPRYSQKIVAFFASPCHTCLVLPXXXXXXADSGTKKHISLLC*IGSLP*SHHHKAFGS 1369
N++PRYSQK F A+PCHT L+LP AD T+ H LC*IGS * H G
Sbjct: 205 NMLPRYSQKTRTFSANPCHTNLILPADVAVAADFETRLHRGPLC*IGSRL**HLRTVTG* 384
Query: 1368 GSA 1360
SA
Sbjct: 385 DSA 393
Score = 32.7 bits (65), Expect(3) = 3e-027
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = +3 / -2
Query: 1272 TDIGQEKDTRAHLVAELKWPDSFAETTT 1355
TD+ K+++ HL ELKWPD T T
Sbjct: 493 TDLTPVKNSQVHLEEELKWPDLLHGTFT 410
Score = 24.0 bits (46), Expect(3) = 3e-027
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = +3 / -3
Query: 1650 DTEIILHSCSSVEELAISRK 1709
+TEI +CSSV++ A+ K
Sbjct: 81 ETEINTDNCSSVKDTAVHEK 22
Score = 22.1 bits (42), Expect(2) = 6e-016
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = -3 / +3
Query: 1360 MTVVVSAKESGHLSSATR* 1304
++V V +SGHLSS++R*
Sbjct: 405 VSVNVPWSKSGHLSSSSR* 461
>gb|BG104097.1|BG104097 RHIZ2_40_E04.b1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 448
Score = 125 bits (267), Expect = 3e-027
Identities = 48/76 (63%), Positives = 56/76 (73%)
Frame = +3 / +3
Query: 258 MGRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINY 437
MGR CC K L+KG W+ EEDE L +I +HG G W S+PK AGL RCGKSCRLRWINY
Sbjct: 33 MGRAPCCEKVGLKKGRWTKEEDEILARYIKEHGEGSWRSLPKNAGLLRCGKSCRLRWINY 212
Query: 438 LRPDLKRGAFAQDEED 485
LR DLKRG ++E+D
Sbjct: 213 LRADLKRGNITEEEDD 260
Score = 77.1 bits (162), Expect = 9e-013
Identities = 38/79 (48%), Positives = 47/79 (59%)
Frame = -2 / -3
Query: 494 DDEVFFVLGECPSLEVWPQIVYPPQPTTLSAPLKPSEFGNRAPAAMAMLCYVIHEFLILL 315
D V +L + PSLE+ PQ+V P QP L AP +PS G +P A AM V + L+LL
Sbjct: 269 DVGVVLLLRDVPSLEIRPQVVDPSQPAALPAPQQPSILGQ*SP*AFAMFLDVPRQDLVLL 90
Query: 314 RGPEPLSQLLLVAARMPPH 258
GP PL Q L+AAR PH
Sbjct: 89 LGPPPLLQPHLLAARRSPH 33
Score = 62.0 bits (129), Expect = 3e-008
Identities = 26/40 (65%), Positives = 31/40 (77%)
Frame = -3 / -1
Query: 460 PLLRSGLR*FIHLSLQLFPHL*SPASLGTELQQPWPCFVM 341
PLLRS LR* IH SLQLFPH +PA LG++L +P PC +M
Sbjct: 235 PLLRSALR*LIHRSLQLFPHRSNPAFLGSDLHEPSPCSLM 116
Score = 54.2 bits (112), Expect = 7e-006
Identities = 33/70 (47%), Positives = 37/70 (52%)
Frame = +1 / +1
Query: 259 WGGILAATSRS*ERGSGPLRRMRNS*IT*QSMAMAAGALFPNSLGFKGAERVVG*GG*TI 438
WG AA * RG GP RR R+ T ++MA A G P LG GA R G G T
Sbjct: 34 WGERRAARRWG*RRGGGPRRRTRSWRGTSRNMAKAHGDHCPRMLGCCGAGRAAGCDGSTT 213
Query: 439 *GQTSREGHS 468
*G+ SREG S
Sbjct: 214 *GRISREGTS 243
Score = 42.3 bits (86), Expect = 0.026
Identities = 30/77 (38%), Positives = 34/77 (44%)
Frame = -1 / -2
Query: 459 LS*GLASDSLSTSAYNSFRTFEAQRVWEQSSSSHGHALLCDS*VSHPPQGTRAPFSASAC 280
LS* S S S +A +S RT Q W S S H C S S PP + +P SA
Sbjct: 234 LS*DPPSGS*SIAACSSSRTAATQHSWAVISMSLRHVP*CTSPGSRPPPWSTSPSSAPPS 55
Query: 279 SSKNASPSQRNAEPGSS 229
S SPS AE S
Sbjct: 54 RSTALSPSSLLAEASPS 4
>gb|CW180394.1|CW180394 104_594_11160615_116_36636_050 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11160615, DNA
sequence
Length = 548
Score = 90.0 bits (190), Expect(2) = 3e-027
Identities = 33/44 (75%), Positives = 40/44 (90%)
Frame = +3 / +3
Query: 390 GLQRCGKSCRLRWINYLRPDLKRGAFAQDEEDLIIELHAVLGNR 521
GL+RCGKSC L WINYLRPDLKR AF+Q+EEDLII LH+++GN+
Sbjct: 231 GLERCGKSCMLTWINYLRPDLKRRAFSQEEEDLIIHLHSMMGNK 362
Score = 54.7 bits (113), Expect(2) = 3e-027
Identities = 19/24 (79%), Positives = 21/24 (87%)
Frame = +3 / +1
Query: 516 NRWSQIAAQLPGRTDNEIKNLWNS 587
+RWS IA QLPGRTDNE+KN WNS
Sbjct: 472 HRWSHIATQLPGRTDNEVKNFWNS 543
Score = 48.7 bits (100), Expect(2) = 2e-011
Identities = 22/39 (56%), Positives = 24/39 (61%)
Frame = -3 / -2
Query: 466 NAPLLRSGLR*FIHLSLQLFPHL*SPASLGTELQQPWPC 350
NA LLRSGLR* IH+S+QL PHL P PW C
Sbjct: 307 NALLLRSGLR*LIHVSMQLLPHLSRPNLTYVIHHNPWNC 191
Score = 46.0 bits (94), Expect(2) = 2e-011
Identities = 17/27 (62%), Positives = 21/27 (77%)
Frame = -2 / -3
Query: 587 RVP*ILDLIISPPWQLRCNLRPPVPED 507
RVP +LDL++ PP QL CN+RPPV D
Sbjct: 543 RVPEVLDLVVRPPRQLSCNVRPPVLAD 463
Score = 44.6 bits (91), Expect(2) = 3e-009
Identities = 19/41 (46%), Positives = 24/41 (58%)
Frame = -2 / -1
Query: 518 VPEDSVQLDDEVFFVLGECPSLEVWPQIVYPPQPTTLSAPL 396
V +++DDEV L EC LEV PQ+V P Q L+ PL
Sbjct: 359 VAHHGMEMDDEVLLFLRECSPLEVRPQVVDPRQHAALATPL 237
Score = 39.6 bits (80), Expect(2) = 3e-009
Identities = 17/25 (68%), Positives = 20/25 (80%)
Frame = -3 / -1
Query: 592 MHEFHRFLISLSVLPGSCAAI*DHL 518
M+EF +FL SLSV PGS A+*DHL
Sbjct: 548 MYEFQKFLTSLSVRPGS*VAM*DHL 474
>gb|CW090149.1|CW090149 104_435_10949116_116_32599_002 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10949116, DNA
sequence
Length = 709
Score = 81.3 bits (171), Expect(3) = 3e-027
Identities = 32/45 (71%), Positives = 34/45 (75%)
Frame = +3 / -3
Query: 387 AGLQRCGKSCRLRWINYLRPDLKRGAFAQDEEDLIIELHAVLGNR 521
AGL RC KSCRLRW NYLRP +KRG F EE LII L A+LGNR
Sbjct: 314 AGLMRCSKSCRLRWTNYLRPGIKRGNFTDQEEKLIIHLQALLGNR 180
Score = 60.2 bits (125), Expect(3) = 3e-027
Identities = 22/46 (47%), Positives = 31/46 (67%)
Frame = +3 / -2
Query: 258 MGRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGL 395
MGR CC K ++KG W+PEED L++++ +HG G W +VP GL
Sbjct: 564 MGRPPCCDKVGVKKGPWTPEEDLMLVSYVQEHGPGNWRAVPTNTGL 427
Score = 52.8 bits (109), Expect(2) = 3e-011
Identities = 18/41 (43%), Positives = 31/41 (75%)
Frame = -2 / +3
Query: 521 PVPEDSVQLDDEVFFVLGECPSLEVWPQIVYPPQPTTLSAP 399
PV ++S+++DDE+ ++GE +L+ P++V PPQP L+AP
Sbjct: 180 PVAKESLEVDDELLLLIGEVAALDSRPEVVRPPQPAALAAP 302
Score = 41.4 bits (84), Expect(2) = 3e-011
Identities = 20/41 (48%), Positives = 23/41 (56%)
Frame = -2 / +1
Query: 371 APAAMAMLCYVIHEFLILLRGPEPLSQLLLVAARMPPHLNA 249
AP A A+L + E +LL GP P LVAAR PPH A
Sbjct: 451 APVAGAVLLDIGDEHEVLLGGPRPFLHAHLVAARRPPHATA 573
Score = 27.2 bits (53), Expect(3) = 3e-027
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = +3 / -3
Query: 519 RWSQIAAQLPGRTDN 563
RW+ IA+ +P RTDN
Sbjct: 47 RWAAIASYMPERTDN 3
>gb|CW340500.1|CW340500 104_841_11485831_116_36146_022 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11485831, DNA
sequence
Length = 681
Score = 124 bits (266), Expect = 4e-027
Identities = 46/72 (63%), Positives = 53/72 (73%)
Frame = +3 / +3
Query: 252 VEMGRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWI 431
V MGR CC K KG W+ EEDE+L+ +I HG GCW S+PK AGL RCGKSCRLRW+
Sbjct: 459 VAMGRSPCCEKAHTNKGAWTKEEDERLVAYIRAHGEGCWRSLPKAAGLPRCGKSCRLRWM 638
Query: 432 NYLRPDLKRGAF 467
NYLRPD +RG F
Sbjct: 639 NYLRPDPQRGNF 674
Score = 70.3 bits (147), Expect = 1e-010
Identities = 31/72 (43%), Positives = 44/72 (61%)
Frame = -2 / -2
Query: 473 LGECPSLEVWPQIVYPPQPTTLSAPLKPSEFGNRAPAAMAMLCYVIHEFLILLRGPEPLS 294
+GE +L V ++V+PPQP L+A + G RAPA + V H+ L+LL GP L
Sbjct: 680 VGEVAALRVRAEVVHPPQPAALAAARQARRLGQRAPAPFPVRPDVRHQPLVLLLGPRALV 501
Query: 293 QLLLVAARMPPH 258
++ L+AAR PPH
Sbjct: 500 RVRLLAARRPPH 465
Score = 47.8 bits (98), Expect = 6e-004
Identities = 21/33 (63%), Positives = 23/33 (69%)
Frame = -3 / -3
Query: 448 SGLR*FIHLSLQLFPHL*SPASLGTELQQPWPC 350
SG R*FIH SLQL P PA+LG+E Q P PC
Sbjct: 655 SGRR*FIHRSLQLLPQRGRPAALGSERQHPSPC 557
>gb|CW034730.1|CW034730 104_265_10502732_114_30378 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10502732, DNA
sequence
Length = 675
Score = 90.0 bits (190), Expect(2) = 4e-027
Identities = 34/44 (77%), Positives = 39/44 (88%)
Frame = +3 / -2
Query: 393 LQRCGKSCRLRWINYLRPDLKRGAFAQDEEDLIIELHAVLGNRW 524
L RCGKSCRLRWINYLRPDLKRG F DEE+ II+LHA+LGN++
Sbjct: 635 LLRCGKSCRLRWINYLRPDLKRGNFTADEEETIIKLHAMLGNKY 504
Score = 57.9 bits (120), Expect(2) = 4e-027
Identities = 21/33 (63%), Positives = 28/33 (84%)
Frame = +3 / -3
Query: 519 RWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKG 617
RWS+IA+ LPGRTDNEIKN+WN+ +KK++ G
Sbjct: 355 RWSKIASCLPGRTDNEIKNVWNTHLKKRVSPAG 257
Score = 47.3 bits (97), Expect(2) = 2e-007
Identities = 20/45 (44%), Positives = 28/45 (62%)
Frame = -2 / +3
Query: 518 VPEDSVQLDDEVFFVLGECPSLEVWPQIVYPPQPTTLSAPLKPSE 384
V E V+LDD + V GE +L+V ++V PPQP L AP +P +
Sbjct: 510 VAEHGVELDDGLLLVGGEVAALQVRAEVVDPPQPAALPAPQQPMD 644
Score = 35.4 bits (71), Expect(2) = 5e-004
Identities = 18/41 (43%), Positives = 19/41 (46%)
Frame = -3 / +1
Query: 523 HLFPRTACXXXXXXXXSWANAPLLRSGLR*FIHLSLQLFPH 401
+L P A S P RSG R* IH S QLFPH
Sbjct: 505 YLLPSMAWSLMMVSSSSAVKLPRFRSGRR*LIHRSRQLFPH 627
Score = 34.1 bits (68), Expect(2) = 5e-004
Identities = 16/22 (72%), Positives = 16/22 (72%)
Frame = -3 / +3
Query: 583 FHRFLISLSVLPGSCAAI*DHL 518
F FLISLSVLPG AI DHL
Sbjct: 291 FQTFLISLSVLPGRHDAILDHL 356
Score = 34.1 bits (68), Expect(2) = 2e-007
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = -2 / +2
Query: 599 LLDARVP*ILDLIISPPWQLRCNLRPP 519
LL RVP +LDL++ P Q R +L PP
Sbjct: 275 LLQVRVPDVLDLVVRPARQARRDLGPP 355
>gb|CW491015.1|CW491015 fsbb001f280l06f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f280l06, DNA
sequence
Length = 400
Score = 124 bits (265), Expect = 5e-027
Identities = 46/73 (63%), Positives = 58/73 (79%)
Frame = +3 / +1
Query: 387 AGLQRCGKSCRLRWINYLRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNE 566
AGL RC KSCRLRW NYLRP ++RG F+ E+ LI+ L A+LGNRW+ IA+ LP RTDN+
Sbjct: 31 AGLLRCSKSCRLRWTNYLRPGIRRGGFSDHEDRLIVHLQALLGNRWAAIASYLPDRTDND 210
Query: 567 IKNLWNSCIKKKL 605
+KN WN+ +KKKL
Sbjct: 211 VKNYWNTHLKKKL 249
Score = 59.3 bits (123), Expect = 2e-007
Identities = 24/72 (33%), Positives = 44/72 (61%)
Frame = -2 / -2
Query: 605 QLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECPSLEVWPQIVYP 426
+LLL+ RVP +LD+++ ++ + P V E+ +++DDE V+GE + ++V P
Sbjct: 249 ELLLEVRVPVVLDVVVGAVGEVGGDGGPAVAEERLEVDDEPVLVVGEAAPADARAEVVGP 70
Query: 425 PQPTTLSAPLKP 390
P+ L+AP +P
Sbjct: 69 PEAAALAAPQQP 34
Score = 39.1 bits (79), Expect = 0.24
Identities = 27/74 (36%), Positives = 31/74 (41%)
Frame = -3 / -3
Query: 604 SFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANAPLLRSGLR*FIH 425
SFFL F FL SLSV G A+ PR+A P G R* +H
Sbjct: 248 SFFLRCVFQ*FLTSLSVRSGR*EAMAAQRLPRSAWRWTMSLSSWSEKPPRRMPGRR*LVH 69
Query: 424 LSLQLFPHL*SPAS 383
QL H SPA+
Sbjct: 68 RRRQLLLHRSSPAN 27
>gb|CW150395.1|CW150395 104_549_11143002_148_36305_067 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11143002, DNA
sequence
Length = 680
Score = 89.5 bits (189), Expect(2) = 1e-026
Identities = 36/53 (67%), Positives = 43/53 (81%)
Frame = +3 / -3
Query: 384 LAGLQRCGKSCRLRWINYLRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQ 542
L GLQR GKSCRLRWINYLRP LKRG F+Q+EED++I L A LGN+ + + AQ
Sbjct: 315 LKGLQRNGKSCRLRWINYLRPGLKRGMFSQEEEDVVINLQAKLGNK*NSLPAQ 157
Score = 57.0 bits (118), Expect(2) = 1e-026
Identities = 21/33 (63%), Positives = 26/33 (78%)
Frame = +3 / -2
Query: 294 RKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAG 392
RKG SPEED++L ++I KHG GCWS+VP AG
Sbjct: 670 RKGCGSPEEDQRLRDYILKHGLGCWSAVPAKAG 572
Score = 40.5 bits (82), Expect(2) = 1e-006
Identities = 20/40 (50%), Positives = 23/40 (57%)
Frame = -1 / +1
Query: 405 RTFEAQRVWEQSSSSHGHALLCDS*VSHPPQGTRAPFSAS 286
RT Q + EQ SSS GHA C * S PPQ T +P +S
Sbjct: 559 RTAAHQPLQEQHSSSRGHA*GCSP*ASGPPQETHSPSGSS 678
Score = 38.2 bits (77), Expect(2) = 1e-006
Identities = 17/45 (37%), Positives = 28/45 (62%)
Frame = -2 / +1
Query: 518 VPEDSVQLDDEVFFVLGECPSLEVWPQIVYPPQPTTLSAPLKPSE 384
V + +++DD+VF +L E +L+ PQ+V P Q T L+ L+ E
Sbjct: 181 VAQLGLEVDDDVFLLLREHSALQPGPQVVDPTQTTALAISLETFE 315
Score = 37.7 bits (76), Expect(2) = 0.42
Identities = 17/35 (48%), Positives = 19/35 (54%)
Frame = +2 / -1
Query: 287 EAEKGALVP*GG*ETHESHNKAWPWLLELCSQTRW 391
E +G V *GG E H +AWP LLE CS W
Sbjct: 677 ELPEGLWVS*GGPEAQGLHPQAWPRLLECCSCKGW 573
Score = 21.7 bits (41), Expect(2) = 0.42
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = +1 / -3
Query: 1915 SSPKLSTAAMHVHAN*LLH 1971
SSP LS +MH+ A * H
Sbjct: 552 SSPLLSYPSMHIAAA*QAH 496
>gb|CW432605.1|CW432605 fsbb001f147g12k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f147g12, DNA
sequence
Length = 751
Score = 77.1 bits (162), Expect(4) = 2e-026
Identities = 26/54 (48%), Positives = 40/54 (74%)
Frame = +3 / +2
Query: 360 GCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRGAFAQDEEDLIIELHAVLGNR 521
G ++++ GL RCGKSCRLRW+NYLRP+++ G F ++E+ LI L+ +G+R
Sbjct: 341 GSFAAICSFVGLNRCGKSCRLRWLNYLRPNIRHGGFTEEEDRLICSLYISIGSR 502
Score = 51.5 bits (106), Expect(4) = 2e-026
Identities = 19/37 (51%), Positives = 25/37 (67%)
Frame = +3 / +3
Query: 252 VEMGRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHG 362
+EMGR CC K ++KG W+PEED L +I +HG G
Sbjct: 93 LEMGRAPCCNKATVKKGPWAPEEDAVLKAYIDEHGAG 203
Score = 50.1 bits (103), Expect(3) = 6e-012
Identities = 20/51 (39%), Positives = 31/51 (60%)
Frame = -2 / -1
Query: 521 PVPEDSVQLDDEVFFVLGECPSLEVWPQIVYPPQPTTLSAPLKPSEFGNRA 369
P P+ V+ DE +L E +V P++V PPQP L+AP++P + NR+
Sbjct: 502 PAPDADVEAADEPVLLLREAAVPDVGPEVVEPPQPAALAAPVQPYK*ANRS 350
Score = 37.7 bits (76), Expect(3) = 6e-012
Identities = 21/40 (52%), Positives = 23/40 (57%)
Frame = -2 / -3
Query: 365 AAMAMLCYVIHEFLILLRGPEPLSQLLLVAARMPPHLNAM 246
AA AML V E +LLR P PL LVAAR P HL +
Sbjct: 206 AAGAMLVDVGLEHGVLLRRPRPLLHRRLVAARRPAHLELL 87
Score = 35.4 bits (71), Expect = 3.0
Identities = 22/44 (50%), Positives = 23/44 (52%)
Frame = +1 / +1
Query: 235 PRFCIALRWGGILAATSRS*ERGSGPLRRMRNS*IT*QSMAMAA 366
PR + RW G AAT R * RG G RR S T SMA AA
Sbjct: 76 PRGTSSSRWAGRRAATRRR*RRGRGRRRRTPCSRPTSTSMAPAA 207
Score = 29.9 bits (59), Expect(4) = 2e-026
Identities = 11/15 (73%), Positives = 13/15 (86%)
Frame = +3 / +2
Query: 510 LGNRWSQIAAQLPGR 554
LG RW+ IAAQLPG+
Sbjct: 677 LGIRWATIAAQLPGK 721
Score = 28.6 bits (56), Expect(3) = 6e-012
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = -3 / -2
Query: 550 PGSCAAI*DHLFPR 509
PGSCAAI HL PR
Sbjct: 717 PGSCAAIVAHLMPR 676
Score = 26.7 bits (52), Expect(4) = 2e-026
Identities = 8/11 (72%), Positives = 10/11 (90%)
Frame = +3 / +3
Query: 549 GRTDNEIKNLW 581
GRTDN++KN W
Sbjct: 717 GRTDNDVKNHW 749
>gb|CD204206.1|CD204206 HS1_4_C12.g1_A012 Heat-shocked seedlings Sorghum bicolor cDNA clone
HS1_4_C12_A012 5', mRNA sequence
Length = 697
Score = 114 bits (244), Expect(2) = 2e-026
Identities = 44/67 (65%), Positives = 51/67 (76%)
Frame = +3 / +3
Query: 381 KLAGLQRCGKSCRLRWINYLRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTD 560
+ AGL+R GKSCRLRW+NYL P L+RG DEE I+ELHA G+RWS+IA LPGRTD
Sbjct: 492 RAAGLRRTGKSCRLRWVNYLHPGLRRGRITADEERRIVELHAQWGSRWSRIARSLPGRTD 671
Query: 561 NEIKNLW 581
EIKN W
Sbjct: 672 XEIKNFW 692
Score = 47.3 bits (97), Expect = 8e-004
Identities = 27/65 (41%), Positives = 30/65 (46%)
Frame = -3 / -1
Query: 577 RFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANAPLLRSGLR*FIHLSLQLFPHL 398
+FLIS SV PG A+ DHL P A S P R G R*F H QL P
Sbjct: 688 KFLISXSVRPGKLLAMRDHLLPHCAWSSTMRRSSSAVMRPRRRPGWR*FTHRRRQLLPVR 509
Query: 397 *SPAS 383
PA+
Sbjct: 508 RRPAA 494
Score = 41.4 bits (84), Expect = 0.049
Identities = 19/59 (32%), Positives = 30/59 (50%)
Frame = -2 / -3
Query: 581 P*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECPSLEVWPQIVYPPQPTTLS 405
P +LDL++ Q + RPP V+L D V G+ S E ++V+PP+ L+
Sbjct: 692 PEVLDLVVGASGQAPGDARPPASPLRVELHDASLLVGGDAASPEARVEVVHPPEAAALA 516
Score = 27.2 bits (53), Expect(2) = 2e-026
Identities = 9/15 (60%), Positives = 13/15 (86%)
Frame = +3 / +1
Query: 291 LRKGLWSPEEDEKLM 335
+RKG W+ EEDE+L+
Sbjct: 460 MRKGPWTDEEDEQLV 504
>gb|CW168224.1|CW168224 104_577_11154029_148_36496_019 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11154029, DNA
sequence
Length = 689
Score = 83.5 bits (176), Expect(2) = 2e-026
Identities = 31/38 (81%), Positives = 35/38 (92%)
Frame = +3 / +2
Query: 282 KQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGL 395
+QKLRKGLWSPEEDEKL NHI ++G GCWSSVPKLAG+
Sbjct: 413 QQKLRKGLWSPEEDEKLYNHIIRYGVGCWSSVPKLAGM 526
Score = 58.3 bits (121), Expect(2) = 2e-026
Identities = 21/21 (100%), Positives = 21/21 (100%)
Frame = +3 / +2
Query: 390 GLQRCGKSCRLRWINYLRPDL 452
GLQRCGKSCRLRWINYLRPDL
Sbjct: 626 GLQRCGKSCRLRWINYLRPDL 688
Score = 36.3 bits (73), Expect(2) = 1e-005
Identities = 19/38 (50%), Positives = 24/38 (63%)
Frame = -2 / -2
Query: 386 EFGNRAPAAMAMLCYVIHEFLILLRGPEPLSQLLLVAA 273
E G+ APA A+ V+ E L+ L PE L+QLLL AA
Sbjct: 517 ELGHGAPAPDAVADDVVVELLVFLGRPESLAQLLLHAA 404
Score = 35.0 bits (70), Expect(2) = 1e-005
Identities = 16/30 (53%), Positives = 19/30 (63%)
Frame = -3 / -3
Query: 451 RSGLR*FIHLSLQLFPHL*SPASLGTELQQ 362
RSG R* IH S QL PHL SP + + Q+
Sbjct: 687 RSGRR*LIHRSRQLLPHLCSPVPMADDGQR 598
Score = 30.4 bits (60), Expect(2) = 0.070
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = -1 / -1
Query: 387 RVWEQSSSSHGHALLCDS*VSHPPQGTRAPFSASA 283
R W +SSS+ + C S P+ TR P +ASA
Sbjct: 518 RAWARSSSTRRRSG*CGCRASRLPRATRVPCAASA 414
Score = 28.1 bits (55), Expect(2) = 0.070
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = -2 / -2
Query: 452 EVWPQIVYPPQPTTLSAPLKPSEFG 378
+V Q+V PP+ L+APL+P G
Sbjct: 688 QVGAQVVDPPKSAALAAPLQPCTNG 614
>gb|CW170503.1|CW170503 104_580_11155240_116_36516_050 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11155240, DNA
sequence
Length = 588
Score = 122 bits (260), Expect = 3e-026
Identities = 53/113 (46%), Positives = 68/113 (60%)
Frame = +3 / -2
Query: 387 AGLQRCGKSCRLRWINYLRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNE 566
AGL+R GKSCRLRW+NYL P L+RG DEE I+ELHA G+RWS+IA LPGRTDNE
Sbjct: 527 AGLRRTGKSCRLRWVNYLHPGLRRGRITADEERRIVELHAQWGSRWSRIARSLPGRTDNE 348
Query: 567 IKNLWNSCIKKKLRQKGIDPNTHKPLTEADHGGAAPTISTERTSGSSDINPSS 725
IKN W + +KK ++ +T A+ + S S +P+S
Sbjct: 347 IKNFWRTRTRKKALEERRAAGAAAAVTATAEPAASSSSSVTMISECRPGSPNS 189
Score = 55.6 bits (115), Expect = 3e-006
Identities = 32/77 (41%), Positives = 36/77 (46%)
Frame = -3 / +1
Query: 604 SFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANAPLLRSGLR*FIH 425
+FFL+ +FLISLSV PG A+ DHL P A S P R G R*F H
Sbjct: 310 AFFLVLVLQKFLISLSVRPGKLLAMRDHLLPHCAWSSTMRRSSSAVMRPRRRPGWR*FTH 489
Query: 424 LSLQLFPHL*SPASLGT 374
QL P PA T
Sbjct: 490 RRRQLLPVRRRPARTTT 540
Score = 41.8 bits (85), Expect = 0.036
Identities = 22/69 (31%), Positives = 33/69 (47%)
Frame = -2 / +3
Query: 611 LPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECPSLEVWPQIV 432
L LL P +LDL++ Q + RPP V+L D V G+ S E ++V
Sbjct: 303 LESLLPGPCPPEVLDLVVGASGQAPGDARPPASPLRVELHDASLLVGGDAASPEARVEVV 482
Query: 431 YPPQPTTLS 405
+PP+ L+
Sbjct: 483 HPPEAAALA 509
>gb|CW312811.1|CW312811 104_802_11470957_116_35780_049 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11470957, DNA
sequence
Length = 627
Score = 122 bits (260), Expect = 3e-026
Identities = 53/113 (46%), Positives = 68/113 (60%)
Frame = +3 / +2
Query: 387 AGLQRCGKSCRLRWINYLRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNE 566
AGL+R GKSCRLRW+NYL P L+RG DEE I+ELHA G+RWS+IA LPGRTDNE
Sbjct: 110 AGLRRTGKSCRLRWVNYLHPGLRRGRITADEERRIVELHAQWGSRWSRIARSLPGRTDNE 289
Query: 567 IKNLWNSCIKKKLRQKGIDPNTHKPLTEADHGGAAPTISTERTSGSSDINPSS 725
IKN W + +KK ++ +T A+ + S S +P+S
Sbjct: 290 IKNFWRTRTRKKALEERRAAGAAAAVTATAEPAASSSSSVTMISECRPGSPNS 448
Score = 55.6 bits (115), Expect = 3e-006
Identities = 32/77 (41%), Positives = 36/77 (46%)
Frame = -3 / -1
Query: 604 SFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANAPLLRSGLR*FIH 425
+FFL+ +FLISLSV PG A+ DHL P A S P R G R*F H
Sbjct: 327 AFFLVLVLQKFLISLSVRPGKLLAMRDHLLPHCAWSSTMRRSSSAVMRPRRRPGWR*FTH 148
Query: 424 LSLQLFPHL*SPASLGT 374
QL P PA T
Sbjct: 147 RRRQLLPVRRRPARTTT 97
Score = 41.8 bits (85), Expect = 0.036
Identities = 22/69 (31%), Positives = 33/69 (47%)
Frame = -2 / -3
Query: 611 LPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECPSLEVWPQIV 432
L LL P +LDL++ Q + RPP V+L D V G+ S E ++V
Sbjct: 334 LESLLPGPCPPEVLDLVVGASGQAPGDARPPASPLRVELHDASLLVGGDAASPEARVEVV 155
Query: 431 YPPQPTTLS 405
+PP+ L+
Sbjct: 154 HPPEAAALA 128
>gb|CD232287.1|CD232287 SS1_39_B06.g1_A012 Salt-stressed seedlings Sorghum bicolor cDNA
clone SS1_39_B06_A012 5', mRNA sequence
Length = 371
Score = 122 bits (260), Expect = 3e-026
Identities = 47/74 (63%), Positives = 56/74 (75%)
Frame = +3 / +2
Query: 381 KLAGLQRCGKSCRLRWINYLRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTD 560
+ AGL+R GKSCRLRW+NYL P L+RG DEE I+ELHA G+RWS+IA LPGRTD
Sbjct: 86 RAAGLRRTGKSCRLRWVNYLHPGLRRGRITADEERRIVELHAQWGSRWSRIARSLPGRTD 265
Query: 561 NEIKNLWNSCIKKK 602
NEIKN W + +KK
Sbjct: 266 NEIKNFWRTRTRKK 307
Score = 55.6 bits (115), Expect = 3e-006
Identities = 31/74 (41%), Positives = 36/74 (48%)
Frame = -3 / -3
Query: 604 SFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANAPLLRSGLR*FIH 425
+FFL+ +FLISLSV PG A+ DHL P A S P R G R*F H
Sbjct: 309 AFFLVLVLQKFLISLSVRPGKLLAMRDHLLPHCAWSSTMRRSSSAVMRPRRRPGWR*FTH 130
Query: 424 LSLQLFPHL*SPAS 383
QL P PA+
Sbjct: 129 RRRQLLPVRRRPAA 88
Score = 41.8 bits (85), Expect = 0.036
Identities = 22/69 (31%), Positives = 33/69 (47%)
Frame = -2 / -2
Query: 611 LPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECPSLEVWPQIV 432
L LL P +LDL++ Q + RPP V+L D V G+ S E ++V
Sbjct: 316 LESLLPGPCPPEVLDLVVGASGQAPGDARPPASPLRVELHDASLLVGGDAASPEARVEVV 137
Query: 431 YPPQPTTLS 405
+PP+ L+
Sbjct: 136 HPPEAAALA 110
>gb|CX606768.1|CX606768 ANR1_4_H01.g1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_4_H01_A002 5', mRNA sequence
Length = 749
Score = 122 bits (260), Expect = 3e-026
Identities = 51/112 (45%), Positives = 68/112 (60%)
Frame = +3 / +2
Query: 387 AGLQRCGKSCRLRWINYLRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNE 566
AGL+R GKSCRLRW+NYL P L+RG DEE LI++LH G+RWS+IA LPGRTDNE
Sbjct: 125 AGLRRTGKSCRLRWVNYLHPGLRRGRITADEERLILQLHEQWGSRWSRIARSLPGRTDNE 304
Query: 567 IKNLWNSCIKKKLRQKGIDPNTHKPLTEADHGGAAPTISTERTSGSSDINPS 722
IKN W + +K+ + T + G++ + S T+ S + S
Sbjct: 305 IKNFWRTRARKQKAAAQQQQGSRSSKTASAFSGSSSSSSVTATTSRSSCSGS 460
Score = 46.0 bits (94), Expect(2) = 0.002
Identities = 22/60 (36%), Positives = 32/60 (53%)
Frame = -2 / -2
Query: 602 LLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECPSLEVWPQIVYPP 423
LL AR P +LDL++ P Q + RPP V+L D+ V G+ + E ++V PP
Sbjct: 340 LLPGARPPEVLDLVVGAPGQAPSDARPPAAPLLVELQDQALLVGGDAAAPEPRVEVVDPP 161
Score = 43.2 bits (88), Expect = 0.014
Identities = 27/75 (36%), Positives = 31/75 (41%)
Frame = -3 / -3
Query: 598 FLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANAPLLRSGLR*FIHLS 419
FL +FLISLSV PG A+ DH P + S P G R* H
Sbjct: 336 FLARVLQKFLISLSVRPGRLLAMRDHRLPHCSWSCRIRRSSSAVMRPRRSPGWR*LTHRR 157
Query: 418 LQLFPHL*SPASLGT 374
QL P PA + T
Sbjct: 156 RQLLPVRLRPAYIST 112
Score = 21.7 bits (41), Expect(2) = 0.002
Identities = 10/31 (32%), Positives = 12/31 (38%)
Frame = -3 / -1
Query: 1144 TALLPMPVPPCRGLSGGRFSPIDVERADGET 1052
T P P P CR G+ A G+T
Sbjct: 719 TCSSPPPPPRCRSRRSGQRRSTPAAAAGGDT 627
>gb|AF466199.1| Sorghum bicolor putative receptor protein kinase,
aminoalcoholphosphotransferase, putative growth-regulating
factor 1, putative GAG-POL precursor, putative GAG-POL
precursor, putative RIRE2 orf3, putative anthocyanin
regulatory C1, putative protein T30F21.6, putative copia
polyprotein, putative copia polyprotein, putative protein
NP_196765.1, and gb protein genes, complete cds; and
putative zinc finger protein gene, partial cds
Length = 144159
Score = 91.8 bits (194), Expect(2) = 3e-026
Identities = 36/56 (64%), Positives = 43/56 (76%)
Frame = +3 / +2
Query: 387 AGLQRCGKSCRLRWINYLRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGR 554
AGL+RCGKSCRLRW+NYLRP++KRG + DEEDLII LH +LGNR + GR
Sbjct: 83621 AGLRRCGKSCRLRWLNYLRPNIKRGNISYDEEDLIIRLHKLLGNRSVSVVRAGGGR 83788
Score = 62.5 bits (130), Expect(2) = 7e-013
Identities = 21/41 (51%), Positives = 31/41 (75%)
Frame = -2 / -3
Query: 521 PVPEDSVQLDDEVFFVLGECPSLEVWPQIVYPPQPTTLSAP 399
PV E+ V+ DDE+ V+G+ +L+VWP++V PPQP L+AP
Sbjct: 83755 PVAEELVEADDEILLVVGDVAALDVWPEVVQPPQPAALAAP 83633
Score = 61.1 bits (127), Expect(2) = 3e-026
Identities = 20/46 (43%), Positives = 31/46 (67%)
Frame = +3 / +2
Query: 255 EMGRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAG 392
EMGR +CC K+ +++G W+ +ED+ L ++ HG G W VP+ AG
Sbjct: 83345 EMGRRACCAKEGVKRGAWTAKEDDVLAAYVKAHGEGKWREVPQKAG 83482
Score = 54.7 bits (113), Expect(2) = 4e-009
Identities = 20/31 (64%), Positives = 24/31 (77%)
Frame = +3 / +3
Query: 510 LGNRWSQIAAQLPGRTDNEIKNLWNSCIKKK 602
L RWS IA +LPGRTDNEIKN WNS + ++
Sbjct: 83826 LAGRWSLIAGRLPGRTDNEIKNYWNSTLGRR 83918
Score = 33.6 bits (67), Expect(2) = 7e-013
Identities = 16/22 (72%), Positives = 16/22 (72%)
Frame = -3 / -3
Query: 583 FHRFLISLSVLPGSCAAI*DHL 518
F FLISLSV PGS AI DHL
Sbjct: 83899 FQ*FLISLSVRPGSLPAISDHL 83834
Score = 28.6 bits (56), Expect(2) = 4e-009
Identities = 14/24 (58%), Positives = 14/24 (58%)
Frame = +1 / +3
Query: 400 GAERVVG*GG*TI*GQTSREGHSP 471
GA R G GG*T GQTS SP
Sbjct: 83634 GAARAAGCGG*TTSGQTSSAATSP 83705
>gb|CW338065.1|CW338065 104_838_11484544_148_36124_060 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11484544, DNA
sequence
Length = 735
Score = 75.8 bits (159), Expect(2) = 3e-026
Identities = 28/46 (60%), Positives = 37/46 (80%)
Frame = +3 / +1
Query: 384 LAGLQRCGKSCRLRWINYLRPDLKRGAFAQDEEDLIIELHAVLGNR 521
++GL+R GKSCRLRW+NYL+PDL R ++ EEDLI+ L +LGNR
Sbjct: 97 ISGLKRSGKSCRLRWMNYLQPDLSREPISKQEEDLIVSLQKLLGNR 234
Score = 65.7 bits (137), Expect(2) = 3e-026
Identities = 25/32 (78%), Positives = 29/32 (90%)
Frame = +3 / +2
Query: 519 RWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQK 614
RWS IAA++PGRTDNEIKN WNS IKKKL+Q+
Sbjct: 332 RWSAIAARMPGRTDNEIKNYWNSRIKKKLQQR 427
Score = 54.7 bits (113), Expect(2) = 3e-016
Identities = 24/34 (70%), Positives = 26/34 (76%)
Frame = -3 / -1
Query: 610 CLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPR 509
C SFFLM EF FLISLSVLPG AAI DHL+ +
Sbjct: 423 CWSFFLMREFQ*FLISLSVLPGILAAIADHLYKK 322
Score = 52.8 bits (109), Expect(2) = 3e-016
Identities = 25/46 (54%), Positives = 28/46 (60%)
Frame = -3 / -2
Query: 526 DHLFPRTACXXXXXXXXSWANAPLLRSGLR*FIHLSLQLFPHL*SP 389
++LFPR+ C LLRSG R*FIHLSLQLFP L SP
Sbjct: 239 NYLFPRSFCKDTMRSSSCLEMGSLLRSGCR*FIHLSLQLFPLLFSP 102
Score = 48.3 bits (99), Expect(2) = 6e-011
Identities = 22/44 (50%), Positives = 28/44 (63%)
Frame = -2 / -1
Query: 521 PVPEDSVQLDDEVFFVLGECPSLEVWPQIVYPPQPTTLSAPLKP 390
PV + +Q DEV F+LG+ EVW QIV+P Q L APL+P
Sbjct: 234 PVS*EFLQGYDEVLFLLGDGLPAEVWLQIVHPSQSAALPAPLQP 103
Score = 41.4 bits (84), Expect(2) = 0.002
Identities = 20/31 (64%), Positives = 23/31 (74%)
Frame = +2 / +1
Query: 521 VVSNCSAAARED***DQESMELVHQEEAEAE 613
VV +CS A +D **DQE +EL HQEEA AE
Sbjct: 334 VVCDCSKDAWKDR**DQELLELTHQEEAPAE 426
Score = 41.4 bits (84), Expect(2) = 6e-011
Identities = 19/32 (59%), Positives = 22/32 (68%)
Frame = -2 / -3
Query: 611 LPQLLLDARVP*ILDLIISPPWQLRCNLRPPV 516
L +LLLDA VP +LDLII P CN RPP+
Sbjct: 424 LLELLLDA*VPVVLDLIICPSRHPCCNRRPPI 329
Score = 35.4 bits (71), Expect = 3.0
Identities = 18/36 (50%), Positives = 20/36 (55%)
Frame = +1 / +3
Query: 535 QRSCQGGLIMRSRIYGTRASRRS*GRKALIPTPTSH 642
Q+ C G IMRSR GT ASRRS R T+H
Sbjct: 348 QQGCLEGQIMRSRTTGTHASRRSSSRG*TPAATTNH 455
Score = 26.3 bits (51), Expect(2) = 0.002
Identities = 15/30 (50%), Positives = 17/30 (56%)
Frame = +1 / +2
Query: 382 NSLGFKGAERVVG*GG*TI*GQTSREGHSP 471
+S G +GA R * G*TI QTS SP
Sbjct: 95 SSQG*RGAGRAAD*DG*TICSQTSAGSPSP 184
>gb|CW217449.1|CW217449 104_650_11195661_148_37134_085 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11195661, DNA
sequence
Length = 678
Score = 75.8 bits (159), Expect(2) = 3e-026
Identities = 28/46 (60%), Positives = 37/46 (80%)
Frame = +3 / -1
Query: 384 LAGLQRCGKSCRLRWINYLRPDLKRGAFAQDEEDLIIELHAVLGNR 521
++GL+R GKSCRLRW+NYL+PDL R ++ EEDLI+ L +LGNR
Sbjct: 660 ISGLKRSGKSCRLRWMNYLQPDLSREPISKQEEDLIVSLQKLLGNR 523
Score = 65.7 bits (137), Expect(2) = 3e-026
Identities = 25/32 (78%), Positives = 29/32 (90%)
Frame = +3 / -2
Query: 519 RWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQK 614
RWS IAA++PGRTDNEIKN WNS IKKKL+Q+
Sbjct: 425 RWSAIAARMPGRTDNEIKNYWNSRIKKKLQQR 330
Score = 54.7 bits (113), Expect(2) = 3e-016
Identities = 24/34 (70%), Positives = 26/34 (76%)
Frame = -3 / +1
Query: 610 CLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPR 509
C SFFLM EF FLISLSVLPG AAI DHL+ +
Sbjct: 334 CWSFFLMREFQ*FLISLSVLPGILAAIADHLYKK 435
Score = 52.8 bits (109), Expect(2) = 3e-016
Identities = 25/46 (54%), Positives = 28/46 (60%)
Frame = -3 / +2
Query: 526 DHLFPRTACXXXXXXXXSWANAPLLRSGLR*FIHLSLQLFPHL*SP 389
++LFPR+ C LLRSG R*FIHLSLQLFP L SP
Sbjct: 518 NYLFPRSFCKDTMRSSSCLEMGSLLRSGCR*FIHLSLQLFPLLFSP 655
Score = 48.3 bits (99), Expect(2) = 6e-011
Identities = 22/44 (50%), Positives = 28/44 (63%)
Frame = -2 / +1
Query: 521 PVPEDSVQLDDEVFFVLGECPSLEVWPQIVYPPQPTTLSAPLKP 390
PV + +Q DEV F+LG+ EVW QIV+P Q L APL+P
Sbjct: 523 PVS*EFLQGYDEVLFLLGDGLPAEVWLQIVHPSQSAALPAPLQP 654
Score = 41.4 bits (84), Expect(2) = 6e-011
Identities = 19/32 (59%), Positives = 22/32 (68%)
Frame = -2 / +3
Query: 611 LPQLLLDARVP*ILDLIISPPWQLRCNLRPPV 516
L +LLLDA VP +LDLII P CN RPP+
Sbjct: 333 LLELLLDA*VPVVLDLIICPSRHPCCNRRPPI 428
Score = 41.4 bits (84), Expect(2) = 0.002
Identities = 20/31 (64%), Positives = 23/31 (74%)
Frame = +2 / -1
Query: 521 VVSNCSAAARED***DQESMELVHQEEAEAE 613
VV +CS A +D **DQE +EL HQEEA AE
Sbjct: 423 VVCDCSKDAWKDR**DQELLELTHQEEAPAE 331
Score = 35.4 bits (71), Expect = 3.0
Identities = 18/36 (50%), Positives = 20/36 (55%)
Frame = +1 / -3
Query: 535 QRSCQGGLIMRSRIYGTRASRRS*GRKALIPTPTSH 642
Q+ C G IMRSR GT ASRRS R T+H
Sbjct: 409 QQGCLEGQIMRSRTTGTHASRRSSSRG*TPAATTNH 302
Score = 26.3 bits (51), Expect(2) = 0.002
Identities = 15/30 (50%), Positives = 17/30 (56%)
Frame = +1 / -2
Query: 382 NSLGFKGAERVVG*GG*TI*GQTSREGHSP 471
+S G +GA R * G*TI QTS SP
Sbjct: 662 SSQG*RGAGRAAD*DG*TICSQTSAGSPSP 573
>gb|CD227025.1|CD227025 CCC1_49_D01.g1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_49_D01_A007 5', mRNA sequence
Length = 615
Score = 103 bits (219), Expect(2) = 3e-026
Identities = 40/69 (57%), Positives = 49/69 (71%)
Frame = +3 / +1
Query: 399 RCGKSCRLRWINYLRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNL 578
R GKSCRLRW N L P ++R F +E+ I+ HA LGNRW+ IA LPGRTDN +KN
Sbjct: 295 RSGKSCRLRWCNQLSPQVERRPFTPEEDAAILAAHARLGNRWAAIARLLPGRTDNAVKNH 474
Query: 579 WNSCIKKKL 605
WNS +K+KL
Sbjct: 475 WNSSLKRKL 501
Score = 38.2 bits (77), Expect(2) = 3e-026
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = +3 / +1
Query: 297 KGLWSPEEDEKLMNHITKHGHGCWSSV 377
KG WSPEEDE L + +HG W+++
Sbjct: 196 KGPWSPEEDEALRRLVERHGARNWTAI 276
Score = 37.3 bits (75), Expect = 0.85
Identities = 19/35 (54%), Positives = 20/35 (57%)
Frame = -3 / -2
Query: 604 SFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTAC 500
SF L EF FL +LSV PG AI FPR AC
Sbjct: 500 SFRLSDEFQWFLTALSVRPGRRRAIAAQRFPRRAC 396
Score = 35.4 bits (71), Expect = 3.0
Identities = 20/71 (28%), Positives = 35/71 (49%)
Frame = -2 / -1
Query: 605 QLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECPSLEVWPQIVYP 426
+L L+ RVP +LD ++ + + P V + V+ D + E +L + Q+V P
Sbjct: 501 ELPLERRVPMVLDGVVGAAGKEARDRGPAVSQARVRGQDRGVLLGREGAALHLRGQLVAP 322
Query: 425 PQPTTLSAPLK 393
P+P L P +
Sbjct: 321 PEPARLPRPAR 289
>gb|CX623122.1|CX623122 GABR1_67_H01.g1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_67_H01_A002 5', mRNA sequence
Length = 785
Score = 105 bits (224), Expect(2) = 3e-026
Identities = 41/60 (68%), Positives = 47/60 (78%)
Frame = +3 / +3
Query: 387 AGLQRCGKSCRLRWINYLRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNE 566
AGL+R GKSCRLRW+NYL P L+RG DEE I+ELHA G+RWS+IA LPGRTDNE
Sbjct: 606 AGLRRTGKSCRLRWVNYLHPGLRRGRITADEERRIVELHAQWGSRWSRIARSLPGRTDNE 785
Score = 42.3 bits (86), Expect = 0.026
Identities = 26/64 (40%), Positives = 27/64 (42%)
Frame = -3 / -2
Query: 565 SLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANAPLLRSGLR*FIHLSLQLFPHL*SPA 386
SLSV PG A+ DHL P A S P R G R*F H QL P PA
Sbjct: 784 SLSVRPGKLLAMRDHLLPHCAWSSTMRRSSSAVMRPRRRPGWR*FTHRRRQLLPVRRRPA 605
Query: 385 SLGT 374
T
Sbjct: 604 RTTT 593
Score = 39.6 bits (80), Expect(2) = 3e-026
Identities = 15/39 (38%), Positives = 24/39 (61%)
Frame = +3 / +1
Query: 291 LRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCG 407
+RKG W+ EEDE+L+ + G W + K++GL+ G
Sbjct: 241 MRKGPWTDEEDEQLVRFVRLFGERRWDFLAKVSGLRGGG 357
Score = 34.1 bits (68), Expect = 7.9
Identities = 16/54 (29%), Positives = 26/54 (48%)
Frame = -2 / -1
Query: 566 LIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECPSLEVWPQIVYPPQPTTLS 405
L++ Q + RPP V+L D V G+ S E ++V+PP+ L+
Sbjct: 785 LVVGASGQAPGDARPPASPLRVELHDASLLVGGDAASPEARVEVVHPPEAAALA 624
Database: Sorghum_nucl_with_EST.fasta
Posted date: May 2, 2006 3:37 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 2,614,130,797
Number of Sequences: 832831
Number of extensions: 41118489
Number of successful extensions: 215347
Number of sequences better than 10.0: 962
length of database: 163,786,556
effective HSP length: 57
effective length of database: 116,315,189
effective search space used: 70487004534
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)