TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= QAO3g02.yg.2.1
(344 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AW745683.1|AW745683 WS1_36_B11.g1_A002 Water-stressed 1 ... 193 6e-049
gb|CD229164.1|CD229164 CCC1_13_B11.b1_A007 Callus culture/c... 193 6e-049
gb|CD229180.1|CD229180 CCC1_13_B11.g1_A007 Callus culture/c... 193 6e-049
gb|CN129758.1|CN129758 RHOH1_37_F03.b1_A002 Acid- and alkal... 193 6e-049
gb|CN130862.1|CN130862 RHOH1_44_G05.b1_A002 Acid- and alkal... 193 6e-049
gb|CD213035.1|CD213035 HS1_28_E12.b1_A012 Heat-shocked seed... 190 8e-048
gb|AW680764.1|AW680764 WS1_7_B09.b1_A002 Water-stressed 1 (... 166 1e-040
gb|AW746681.1|AW746681 WS1_54_H03.g1_A002 Water-stressed 1 ... 166 1e-040
gb|CD211575.1|CD211575 HS1_63_F12.b1_A012 Heat-shocked seed... 166 1e-040
gb|CD212152.1|CD212152 HS1_71_G04.b1_A012 Heat-shocked seed... 166 1e-040
gb|CN135327.1|CN135327 OX1_32_C03.b1_A002 Oxidatively-stres... 166 1e-040
gb|CL173030.1|CL173030 104_376_10890597_116_31795_117 Sorgh... 87 2e-040
gb|CW209293.1|CW209293 104_639_11189160_116_36988_092 Sorgh... 84 4e-040
gb|CD210972.1|CD210972 HS1_58_D09.b1_A012 Heat-shocked seed... 160 7e-039
gb|AW677678.1|AW677678 WS1_10_F06.b1_A002 Water-stressed 1 ... 105 4e-038
gb|CD211415.1|CD211415 HS1_60_B03.b1_A012 Heat-shocked seed... 144 4e-034
gb|CL167683.1|CL167683 104_364_10810249_114_31802_313 Sorgh... 75 8e-027
gb|CL167684.1|CL167684 104_364_10810249_116_31803_313 Sorgh... 87 3e-024
gb|CD208906.1|CD208906 HS1_45_A03.b1_A012 Heat-shocked seed... 107 7e-023
gb|CD462225.1|CD462225 SA1_40_H09.b1_A002 Salicylic acid-tr... 107 7e-023
gb|CX609224.1|CX609224 ANR1_11_H11.b1_A002 Anaerobic roots ... 64 7e-023
gb|AW745934.1|AW745934 WS1_38_G07.b1_A002 Water-stressed 1 ... 68 2e-022
gb|BM331418.1|BM331418 PIC1_65_H04.g1_A002 Pathogen-infecte... 105 2e-022
gb|AW745330.1|AW745330 WS1_33_F10.b1_A002 Water-stressed 1 ... 68 2e-022
gb|BE593477.1|BE593477 WS1_98_C11.b1_A002 Water-stressed 1 ... 68 2e-022
gb|CN134411.1|CN134411 OX1_26_E07.b1_A002 Oxidatively-stres... 68 4e-022
gb|CN148546.1|CN148546 WOUND1_57_F11.b1_A002 Wounded leaves... 68 2e-021
>gb|AW745683.1|AW745683 WS1_36_B11.g1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 647
Score = 193 bits (417), Expect = 6e-049
Identities = 80/102 (78%), Positives = 81/102 (79%)
Frame = +1 / +2
Query: 16 YLFDSTNDVSVLPXXHTIHVKCLKEMEEHCQFACPLCSXXXXXMXXXXERLXXXXXXLSD 195
YLF+STNDVSVLP HTIHVKCLKEMEEHCQFACPLCS M ERL LSD
Sbjct: 56 YLFESTNDVSVLPCGHTIHVKCLKEMEEHCQFACPLCSKSVCDMSKAWERLDMELATLSD 235
Query: 196 SCDHKMVRILCNDCGAISDVQFHLIAHKCQNXXSYNTRXI*S 321
SCD KMVRILCNDCGAISDVQFHLIAHKCQN SYNTR I*S
Sbjct: 236 SCDDKMVRILCNDCGAISDVQFHLIAHKCQNCKSYNTRQI*S 361
Score = 186 bits (400), Expect = 1e-046
Identities = 79/102 (77%), Positives = 80/102 (78%)
Frame = -1 / -3
Query: 320 LQIXRVLYXXXFWHLCAIKWNCTSDIAPQSLHNMRTIL*SQESDRXXXXXXSLSXXXXMX 141
LQI RVLY FWHLCAIKWNCTSDIAPQSLHNMRTIL SQESDR SLS M
Sbjct: 360 LQIWRVLYDLQFWHLCAIKWNCTSDIAPQSLHNMRTILSSQESDRVASSMSSLSHAFDMS 181
Query: 140 XXXLEQRGHANWQCSSISFRHFT*MV*XXGRTETSFVESNKY 15
LEQRGHANWQCSSIS RHFT*MV* GRTETSFV+SNKY
Sbjct: 180 QTDLEQRGHANWQCSSISLRHFT*MV*PQGRTETSFVDSNKY 55
Score = 186 bits (400), Expect = 1e-046
Identities = 75/110 (68%), Positives = 77/110 (70%)
Frame = -2 / -1
Query: 343 CXXXCDXXFKSXGCCMXXXSGTCAQSNGTAHLILPRSRCIICGPFCDHRSQTEXXXXXXA 164
C C+ FKS GCCM SGTCAQSNGTAHLI PRSRCIICGPF HRSQTE
Sbjct: 383 CRVTCNSYFKSGGCCMTCNSGTCAQSNGTAHLI*PRSRCIICGPFYHHRSQTELPAPCRV 204
Query: 163 FPXXXXCXXXXWSKGGMQTGSALPFLSGTLHEWYDXKAGRKHHLSNRTST 14
P C WSKGGMQTGSA PFL GTLHEWYD KAG+KHH S RTST
Sbjct: 203 SPMPSTCHKPTWSKGGMQTGSAPPFL*GTLHEWYDHKAGQKHHSSTRTST 54
Score = 172 bits (370), Expect = 2e-042
Identities = 78/105 (74%), Positives = 81/105 (77%)
Frame = -3 / -2
Query: 330 AXXTSNLAGVV*XXILALVRNQMELHI*YCPAVVA*YADHFVITGVRQXXXXXXEPFPXX 151
A TSNLAGVV* ILALVRNQMELHI*Y PAVVA*YADHF+ITGVRQ E P
Sbjct: 370 AILTSNLAGVV*LAILALVRNQMELHI*YSPAVVA*YADHFIITGVRQSCQLHVESLPCL 191
Query: 150 XHVXXXXGAKGACKLAVLFHFFQALYMNGMTXRQDGNIICRIEQV 16
HV GAKGACKLAVL HFF+ALYMNGMT RQD NII R+EQV
Sbjct: 190 RHVTNRLGAKGACKLAVLLHFFEALYMNGMTTRQDRNIIRRLEQV 56
Score = 163 bits (350), Expect = 1e-039
Identities = 72/102 (70%), Positives = 75/102 (73%)
Frame = +3 / +1
Query: 15 VLVRFDK*CFRPAXXSYHSCKVPERNGRALPVCMPPLLQXXXXHXXXXGKAXXXXXXSV* 194
VLVR D+*CF PA SYHSCKVP+RNG ALPVCMPPLLQ H G+ SV*
Sbjct: 55 VLVRVDE*CFCPALWSYHSCKVPQRNGGALPVCMPPLLQVGL*HVEGMGETRHGAGNSV* 234
Query: 195 LL*SQNGPHIMQRLRGNIRCAVPFDCAQVPEXXXIQHPXDLK 320
LL* NGPHIMQRLRG IRCAVPFDCAQVPE IQHP DLK
Sbjct: 235 LL***NGPHIMQRLRGYIRCAVPFDCAQVPELQVIQHPPDLK 360
Score = 153 bits (329), Expect = 9e-037
Identities = 68/109 (62%), Positives = 71/109 (65%)
Frame = +2 / +3
Query: 17 TCSIRQMMFPSCLXVIPFMXXXXXXXXXXXXLHAPFAPXXXXTXXXXGKGSXXXXXLCLT 196
TCS R+MMF SCL VIPFM LHAPFAP T G+ S LCLT
Sbjct: 57 TCSSRRMMFLSCLVVIPFM*SASKKWRSTASLHAPFAPSRFVTCRRHGRDSTWSWQLCLT 236
Query: 197 PVITKWSAYYATTAGQYQMCSSI*LRTSARXXXHTTPARFEVXIAXXXT 343
PV+ KWSAYYATTAG YQMCSSI*LRTSAR HTTPARFEV IA T
Sbjct: 237 PVMIKWSAYYATTAGLYQMCSSI*LRTSARIASHTTPARFEVRIASHTT 383
>gb|CD229164.1|CD229164 CCC1_13_B11.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_13_B11_A007 3', mRNA sequence
Length = 638
Score = 193 bits (417), Expect = 6e-049
Identities = 80/102 (78%), Positives = 81/102 (79%)
Frame = +1 / +3
Query: 16 YLFDSTNDVSVLPXXHTIHVKCLKEMEEHCQFACPLCSXXXXXMXXXXERLXXXXXXLSD 195
YLF+STNDVSVLP HTIHVKCLKEMEEHCQFACPLCS M ERL LSD
Sbjct: 3 YLFESTNDVSVLPCGHTIHVKCLKEMEEHCQFACPLCSKSVCDMSKAWERLDMELATLSD 182
Query: 196 SCDHKMVRILCNDCGAISDVQFHLIAHKCQNXXSYNTRXI*S 321
SCD KMVRILCNDCGAISDVQFHLIAHKCQN SYNTR I*S
Sbjct: 183 SCDDKMVRILCNDCGAISDVQFHLIAHKCQNCKSYNTRQI*S 308
Score = 186 bits (400), Expect = 1e-046
Identities = 79/102 (77%), Positives = 80/102 (78%)
Frame = -1 / -2
Query: 320 LQIXRVLYXXXFWHLCAIKWNCTSDIAPQSLHNMRTIL*SQESDRXXXXXXSLSXXXXMX 141
LQI RVLY FWHLCAIKWNCTSDIAPQSLHNMRTIL SQESDR SLS M
Sbjct: 307 LQIWRVLYDLQFWHLCAIKWNCTSDIAPQSLHNMRTILSSQESDRVASSMSSLSHAFDMS 128
Query: 140 XXXLEQRGHANWQCSSISFRHFT*MV*XXGRTETSFVESNKY 15
LEQRGHANWQCSSIS RHFT*MV* GRTETSFV+SNKY
Sbjct: 127 QTDLEQRGHANWQCSSISLRHFT*MV*PQGRTETSFVDSNKY 2
Score = 183 bits (394), Expect = 9e-046
Identities = 73/110 (66%), Positives = 77/110 (70%)
Frame = -2 / -3
Query: 343 CXXXCDXXFKSXGCCMXXXSGTCAQSNGTAHLILPRSRCIICGPFCDHRSQTEXXXXXXA 164
C C+ F+S GCCM SGTCAQSNGTAHLI PRSRCIICGPF HRSQTE
Sbjct: 330 CRVTCNSYFRSGGCCMTCNSGTCAQSNGTAHLI*PRSRCIICGPFYHHRSQTELPAPCRV 151
Query: 163 FPXXXXCXXXXWSKGGMQTGSALPFLSGTLHEWYDXKAGRKHHLSNRTST 14
P C W+KGGMQTGSA PFL GTLHEWYD KAG+KHH S RTST
Sbjct: 150 SPMPSTCHKPTWNKGGMQTGSAPPFL*GTLHEWYDHKAGQKHHSSTRTST 1
Score = 168 bits (361), Expect = 3e-041
Identities = 76/105 (72%), Positives = 80/105 (76%)
Frame = -3 / -1
Query: 330 AXXTSNLAGVV*XXILALVRNQMELHI*YCPAVVA*YADHFVITGVRQXXXXXXEPFPXX 151
A TS+LAGVV* ILALVRNQMELHI*Y PAVVA*YADHF+ITGVRQ E P
Sbjct: 317 AILTSDLAGVV*LAILALVRNQMELHI*YSPAVVA*YADHFIITGVRQSCQLHVESLPCL 138
Query: 150 XHVXXXXGAKGACKLAVLFHFFQALYMNGMTXRQDGNIICRIEQV 16
HV G KGACKLAVL HFF+ALYMNGMT RQD NII R+EQV
Sbjct: 137 RHVTNRLGTKGACKLAVLLHFFEALYMNGMTTRQDRNIIRRLEQV 3
Score = 161 bits (346), Expect = 4e-039
Identities = 71/102 (69%), Positives = 74/102 (72%)
Frame = +3 / +2
Query: 15 VLVRFDK*CFRPAXXSYHSCKVPERNGRALPVCMPPLLQXXXXHXXXXGKAXXXXXXSV* 194
VLVR D+*CF PA SYHSCKVP+RNG ALPVCMPPL Q H G+ SV*
Sbjct: 2 VLVRVDE*CFCPALWSYHSCKVPQRNGGALPVCMPPLFQVGL*HVEGMGETRHGAGNSV* 181
Query: 195 LL*SQNGPHIMQRLRGNIRCAVPFDCAQVPEXXXIQHPXDLK 320
LL* NGPHIMQRLRG IRCAVPFDCAQVPE IQHP DLK
Sbjct: 182 LL***NGPHIMQRLRGYIRCAVPFDCAQVPELQVIQHPPDLK 307
Score = 148 bits (317), Expect = 4e-035
Identities = 66/109 (60%), Positives = 69/109 (63%)
Frame = +2 / +1
Query: 17 TCSIRQMMFPSCLXVIPFMXXXXXXXXXXXXLHAPFAPXXXXTXXXXGKGSXXXXXLCLT 196
TCS R+MMF SCL VIPFM LHAPF P T G+ S LCLT
Sbjct: 4 TCSSRRMMFLSCLVVIPFM*SASKKWRSTASLHAPFVPSRFVTCRRHGRDSTWSWQLCLT 183
Query: 197 PVITKWSAYYATTAGQYQMCSSI*LRTSARXXXHTTPARFEVXIAXXXT 343
PV+ KWSAYYATTAG YQMCSSI*LRTSAR HTTPAR EV IA T
Sbjct: 184 PVMIKWSAYYATTAGLYQMCSSI*LRTSARIASHTTPARSEVRIASHTT 330
>gb|CD229180.1|CD229180 CCC1_13_B11.g1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_13_B11_A007 5', mRNA sequence
Length = 654
Score = 193 bits (417), Expect = 6e-049
Identities = 80/102 (78%), Positives = 81/102 (79%)
Frame = +1 / +3
Query: 16 YLFDSTNDVSVLPXXHTIHVKCLKEMEEHCQFACPLCSXXXXXMXXXXERLXXXXXXLSD 195
YLF+STNDVSVLP HTIHVKCLKEMEEHCQFACPLCS M ERL LSD
Sbjct: 246 YLFESTNDVSVLPCGHTIHVKCLKEMEEHCQFACPLCSKSVCDMSKAWERLDMELATLSD 425
Query: 196 SCDHKMVRILCNDCGAISDVQFHLIAHKCQNXXSYNTRXI*S 321
SCD KMVRILCNDCGAISDVQFHLIAHKCQN SYNTR I*S
Sbjct: 426 SCDDKMVRILCNDCGAISDVQFHLIAHKCQNCKSYNTRQI*S 551
Score = 186 bits (400), Expect = 1e-046
Identities = 79/102 (77%), Positives = 80/102 (78%)
Frame = -1 / -3
Query: 320 LQIXRVLYXXXFWHLCAIKWNCTSDIAPQSLHNMRTIL*SQESDRXXXXXXSLSXXXXMX 141
LQI RVLY FWHLCAIKWNCTSDIAPQSLHNMRTIL SQESDR SLS M
Sbjct: 550 LQIWRVLYDLQFWHLCAIKWNCTSDIAPQSLHNMRTILSSQESDRVASSMSSLSHAFDMS 371
Query: 140 XXXLEQRGHANWQCSSISFRHFT*MV*XXGRTETSFVESNKY 15
LEQRGHANWQCSSIS RHFT*MV* GRTETSFV+SNKY
Sbjct: 370 QTDLEQRGHANWQCSSISLRHFT*MV*PQGRTETSFVDSNKY 245
Score = 183 bits (394), Expect = 9e-046
Identities = 73/110 (66%), Positives = 77/110 (70%)
Frame = -2 / -1
Query: 343 CXXXCDXXFKSXGCCMXXXSGTCAQSNGTAHLILPRSRCIICGPFCDHRSQTEXXXXXXA 164
C C+ F+S GCCM SGTCAQSNGTAHLI PRSRCIICGPF HRSQTE
Sbjct: 573 CRVTCNSYFRSGGCCMTCNSGTCAQSNGTAHLI*PRSRCIICGPFYHHRSQTELPAPCRV 394
Query: 163 FPXXXXCXXXXWSKGGMQTGSALPFLSGTLHEWYDXKAGRKHHLSNRTST 14
P C W+KGGMQTGSA PFL GTLHEWYD KAG+KHH S RTST
Sbjct: 393 SPMPSTCHKPTWNKGGMQTGSAPPFL*GTLHEWYDHKAGQKHHSSTRTST 244
Score = 168 bits (361), Expect = 3e-041
Identities = 76/105 (72%), Positives = 80/105 (76%)
Frame = -3 / -2
Query: 330 AXXTSNLAGVV*XXILALVRNQMELHI*YCPAVVA*YADHFVITGVRQXXXXXXEPFPXX 151
A TS+LAGVV* ILALVRNQMELHI*Y PAVVA*YADHF+ITGVRQ E P
Sbjct: 560 AILTSDLAGVV*LAILALVRNQMELHI*YSPAVVA*YADHFIITGVRQSCQLHVESLPCL 381
Query: 150 XHVXXXXGAKGACKLAVLFHFFQALYMNGMTXRQDGNIICRIEQV 16
HV G KGACKLAVL HFF+ALYMNGMT RQD NII R+EQV
Sbjct: 380 RHVTNRLGTKGACKLAVLLHFFEALYMNGMTTRQDRNIIRRLEQV 246
Score = 161 bits (346), Expect = 4e-039
Identities = 71/102 (69%), Positives = 74/102 (72%)
Frame = +3 / +2
Query: 15 VLVRFDK*CFRPAXXSYHSCKVPERNGRALPVCMPPLLQXXXXHXXXXGKAXXXXXXSV* 194
VLVR D+*CF PA SYHSCKVP+RNG ALPVCMPPL Q H G+ SV*
Sbjct: 245 VLVRVDE*CFCPALWSYHSCKVPQRNGGALPVCMPPLFQVGL*HVEGMGETRHGAGNSV* 424
Query: 195 LL*SQNGPHIMQRLRGNIRCAVPFDCAQVPEXXXIQHPXDLK 320
LL* NGPHIMQRLRG IRCAVPFDCAQVPE IQHP DLK
Sbjct: 425 LL***NGPHIMQRLRGYIRCAVPFDCAQVPELQVIQHPPDLK 550
Score = 148 bits (317), Expect = 4e-035
Identities = 66/109 (60%), Positives = 69/109 (63%)
Frame = +2 / +1
Query: 17 TCSIRQMMFPSCLXVIPFMXXXXXXXXXXXXLHAPFAPXXXXTXXXXGKGSXXXXXLCLT 196
TCS R+MMF SCL VIPFM LHAPF P T G+ S LCLT
Sbjct: 247 TCSSRRMMFLSCLVVIPFM*SASKKWRSTASLHAPFVPSRFVTCRRHGRDSTWSWQLCLT 426
Query: 197 PVITKWSAYYATTAGQYQMCSSI*LRTSARXXXHTTPARFEVXIAXXXT 343
PV+ KWSAYYATTAG YQMCSSI*LRTSAR HTTPAR EV IA T
Sbjct: 427 PVMIKWSAYYATTAGLYQMCSSI*LRTSARIASHTTPARSEVRIASHTT 573
>gb|CN129758.1|CN129758 RHOH1_37_F03.b1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_37_F03_A002 3', mRNA sequence
Length = 832
Score = 193 bits (417), Expect = 6e-049
Identities = 80/102 (78%), Positives = 81/102 (79%)
Frame = +1 / +1
Query: 16 YLFDSTNDVSVLPXXHTIHVKCLKEMEEHCQFACPLCSXXXXXMXXXXERLXXXXXXLSD 195
YLF+STNDVSVLP HTIHVKCLKEMEEHCQFACPLCS M ERL LSD
Sbjct: 163 YLFESTNDVSVLPCGHTIHVKCLKEMEEHCQFACPLCSKSVCDMSKAWERLDMELATLSD 342
Query: 196 SCDHKMVRILCNDCGAISDVQFHLIAHKCQNXXSYNTRXI*S 321
SCD KMVRILCNDCGAISDVQFHLIAHKCQN SYNTR I*S
Sbjct: 343 SCDDKMVRILCNDCGAISDVQFHLIAHKCQNCKSYNTRQI*S 468
Score = 186 bits (400), Expect = 1e-046
Identities = 79/102 (77%), Positives = 80/102 (78%)
Frame = -1 / -3
Query: 320 LQIXRVLYXXXFWHLCAIKWNCTSDIAPQSLHNMRTIL*SQESDRXXXXXXSLSXXXXMX 141
LQI RVLY FWHLCAIKWNCTSDIAPQSLHNMRTIL SQESDR SLS M
Sbjct: 467 LQIWRVLYDLQFWHLCAIKWNCTSDIAPQSLHNMRTILSSQESDRVASSMSSLSHAFDMS 288
Query: 140 XXXLEQRGHANWQCSSISFRHFT*MV*XXGRTETSFVESNKY 15
LEQRGHANWQCSSIS RHFT*MV* GRTETSFV+SNKY
Sbjct: 287 QTDLEQRGHANWQCSSISLRHFT*MV*PQGRTETSFVDSNKY 162
Score = 184 bits (397), Expect = 4e-046
Identities = 74/110 (67%), Positives = 77/110 (70%)
Frame = -2 / -1
Query: 343 CXXXCDXXFKSXGCCMXXXSGTCAQSNGTAHLILPRSRCIICGPFCDHRSQTEXXXXXXA 164
C C+ F+S GCCM SGTCAQSNGTAHLI PRSRCIICGPF HRSQTE
Sbjct: 490 CRVTCNSYFRSGGCCMTCNSGTCAQSNGTAHLI*PRSRCIICGPFYHHRSQTELPAPCRV 311
Query: 163 FPXXXXCXXXXWSKGGMQTGSALPFLSGTLHEWYDXKAGRKHHLSNRTST 14
P C WSKGGMQTGSA PFL GTLHEWYD KAG+KHH S RTST
Sbjct: 310 SPMPSTCHKPTWSKGGMQTGSAPPFL*GTLHEWYDHKAGQKHHSSTRTST 161
Score = 170 bits (365), Expect = 9e-042
Identities = 77/105 (73%), Positives = 81/105 (77%)
Frame = -3 / -2
Query: 330 AXXTSNLAGVV*XXILALVRNQMELHI*YCPAVVA*YADHFVITGVRQXXXXXXEPFPXX 151
A TS+LAGVV* ILALVRNQMELHI*Y PAVVA*YADHF+ITGVRQ E P
Sbjct: 477 AILTSDLAGVV*LAILALVRNQMELHI*YSPAVVA*YADHFIITGVRQSCQLHVESLPCL 298
Query: 150 XHVXXXXGAKGACKLAVLFHFFQALYMNGMTXRQDGNIICRIEQV 16
HV GAKGACKLAVL HFF+ALYMNGMT RQD NII R+EQV
Sbjct: 297 RHVTNRLGAKGACKLAVLLHFFEALYMNGMTTRQDRNIIRRLEQV 163
Score = 163 bits (350), Expect = 1e-039
Identities = 72/102 (70%), Positives = 75/102 (73%)
Frame = +3 / +3
Query: 15 VLVRFDK*CFRPAXXSYHSCKVPERNGRALPVCMPPLLQXXXXHXXXXGKAXXXXXXSV* 194
VLVR D+*CF PA SYHSCKVP+RNG ALPVCMPPLLQ H G+ SV*
Sbjct: 162 VLVRVDE*CFCPALWSYHSCKVPQRNGGALPVCMPPLLQVGL*HVEGMGETRHGAGNSV* 341
Query: 195 LL*SQNGPHIMQRLRGNIRCAVPFDCAQVPEXXXIQHPXDLK 320
LL* NGPHIMQRLRG IRCAVPFDCAQVPE IQHP DLK
Sbjct: 342 LL***NGPHIMQRLRGYIRCAVPFDCAQVPELQVIQHPPDLK 467
Score = 149 bits (321), Expect = 1e-035
Identities = 67/109 (61%), Positives = 70/109 (64%)
Frame = +2 / +2
Query: 17 TCSIRQMMFPSCLXVIPFMXXXXXXXXXXXXLHAPFAPXXXXTXXXXGKGSXXXXXLCLT 196
TCS R+MMF SCL VIPFM LHAPFAP T G+ S LCLT
Sbjct: 164 TCSSRRMMFLSCLVVIPFM*SASKKWRSTASLHAPFAPSRFVTCRRHGRDSTWSWQLCLT 343
Query: 197 PVITKWSAYYATTAGQYQMCSSI*LRTSARXXXHTTPARFEVXIAXXXT 343
PV+ KWSAYYATTAG YQMCSSI*LRTSAR HTTPAR EV IA T
Sbjct: 344 PVMIKWSAYYATTAGLYQMCSSI*LRTSARIASHTTPARSEVRIASHTT 490
>gb|CN130862.1|CN130862 RHOH1_44_G05.b1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_44_G05_A002 3', mRNA sequence
Length = 764
Score = 193 bits (417), Expect = 6e-049
Identities = 80/102 (78%), Positives = 81/102 (79%)
Frame = +1 / +3
Query: 16 YLFDSTNDVSVLPXXHTIHVKCLKEMEEHCQFACPLCSXXXXXMXXXXERLXXXXXXLSD 195
YLF+STNDVSVLP HTIHVKCLKEMEEHCQFACPLCS M ERL LSD
Sbjct: 99 YLFESTNDVSVLPCGHTIHVKCLKEMEEHCQFACPLCSKSVCDMSKAWERLDMELATLSD 278
Query: 196 SCDHKMVRILCNDCGAISDVQFHLIAHKCQNXXSYNTRXI*S 321
SCD KMVRILCNDCGAISDVQFHLIAHKCQN SYNTR I*S
Sbjct: 279 SCDDKMVRILCNDCGAISDVQFHLIAHKCQNCKSYNTRQI*S 404
Score = 186 bits (400), Expect = 1e-046
Identities = 79/102 (77%), Positives = 80/102 (78%)
Frame = -1 / -2
Query: 320 LQIXRVLYXXXFWHLCAIKWNCTSDIAPQSLHNMRTIL*SQESDRXXXXXXSLSXXXXMX 141
LQI RVLY FWHLCAIKWNCTSDIAPQSLHNMRTIL SQESDR SLS M
Sbjct: 403 LQIWRVLYDLQFWHLCAIKWNCTSDIAPQSLHNMRTILSSQESDRVASSMSSLSHAFDMS 224
Query: 140 XXXLEQRGHANWQCSSISFRHFT*MV*XXGRTETSFVESNKY 15
LEQRGHANWQCSSIS RHFT*MV* GRTETSFV+SNKY
Sbjct: 223 QTDLEQRGHANWQCSSISLRHFT*MV*PQGRTETSFVDSNKY 98
Score = 184 bits (397), Expect = 4e-046
Identities = 74/110 (67%), Positives = 77/110 (70%)
Frame = -2 / -3
Query: 343 CXXXCDXXFKSXGCCMXXXSGTCAQSNGTAHLILPRSRCIICGPFCDHRSQTEXXXXXXA 164
C C+ F+S GCCM SGTCAQSNGTAHLI PRSRCIICGPF HRSQTE
Sbjct: 426 CRVTCNSYFRSGGCCMTCNSGTCAQSNGTAHLI*PRSRCIICGPFYHHRSQTELPAPCRV 247
Query: 163 FPXXXXCXXXXWSKGGMQTGSALPFLSGTLHEWYDXKAGRKHHLSNRTST 14
P C WSKGGMQTGSA PFL GTLHEWYD KAG+KHH S RTST
Sbjct: 246 SPMPSTCHKPTWSKGGMQTGSAPPFL*GTLHEWYDHKAGQKHHSSTRTST 97
Score = 170 bits (365), Expect = 9e-042
Identities = 77/105 (73%), Positives = 81/105 (77%)
Frame = -3 / -1
Query: 330 AXXTSNLAGVV*XXILALVRNQMELHI*YCPAVVA*YADHFVITGVRQXXXXXXEPFPXX 151
A TS+LAGVV* ILALVRNQMELHI*Y PAVVA*YADHF+ITGVRQ E P
Sbjct: 413 AILTSDLAGVV*LAILALVRNQMELHI*YSPAVVA*YADHFIITGVRQSCQLHVESLPCL 234
Query: 150 XHVXXXXGAKGACKLAVLFHFFQALYMNGMTXRQDGNIICRIEQV 16
HV GAKGACKLAVL HFF+ALYMNGMT RQD NII R+EQV
Sbjct: 233 RHVTNRLGAKGACKLAVLLHFFEALYMNGMTTRQDRNIIRRLEQV 99
Score = 163 bits (350), Expect = 1e-039
Identities = 72/102 (70%), Positives = 75/102 (73%)
Frame = +3 / +2
Query: 15 VLVRFDK*CFRPAXXSYHSCKVPERNGRALPVCMPPLLQXXXXHXXXXGKAXXXXXXSV* 194
VLVR D+*CF PA SYHSCKVP+RNG ALPVCMPPLLQ H G+ SV*
Sbjct: 98 VLVRVDE*CFCPALWSYHSCKVPQRNGGALPVCMPPLLQVGL*HVEGMGETRHGAGNSV* 277
Query: 195 LL*SQNGPHIMQRLRGNIRCAVPFDCAQVPEXXXIQHPXDLK 320
LL* NGPHIMQRLRG IRCAVPFDCAQVPE IQHP DLK
Sbjct: 278 LL***NGPHIMQRLRGYIRCAVPFDCAQVPELQVIQHPPDLK 403
Score = 149 bits (321), Expect = 1e-035
Identities = 67/109 (61%), Positives = 70/109 (64%)
Frame = +2 / +1
Query: 17 TCSIRQMMFPSCLXVIPFMXXXXXXXXXXXXLHAPFAPXXXXTXXXXGKGSXXXXXLCLT 196
TCS R+MMF SCL VIPFM LHAPFAP T G+ S LCLT
Sbjct: 100 TCSSRRMMFLSCLVVIPFM*SASKKWRSTASLHAPFAPSRFVTCRRHGRDSTWSWQLCLT 279
Query: 197 PVITKWSAYYATTAGQYQMCSSI*LRTSARXXXHTTPARFEVXIAXXXT 343
PV+ KWSAYYATTAG YQMCSSI*LRTSAR HTTPAR EV IA T
Sbjct: 280 PVMIKWSAYYATTAGLYQMCSSI*LRTSARIASHTTPARSEVRIASHTT 426
>gb|CD213035.1|CD213035 HS1_28_E12.b1_A012 Heat-shocked seedlings Sorghum bicolor cDNA
clone HS1_28_E12_A012 3', mRNA sequence
Length = 700
Score = 190 bits (409), Expect = 8e-048
Identities = 79/102 (77%), Positives = 80/102 (78%)
Frame = +1 / +1
Query: 16 YLFDSTNDVSVLPXXHTIHVKCLKEMEEHCQFACPLCSXXXXXMXXXXERLXXXXXXLSD 195
YLF+STNDVSVLP HTIHVKCLKEMEEHCQFAC LCS M ERL LSD
Sbjct: 61 YLFESTNDVSVLPCGHTIHVKCLKEMEEHCQFACALCSKSVCDMSKAWERLDMELATLSD 240
Query: 196 SCDHKMVRILCNDCGAISDVQFHLIAHKCQNXXSYNTRXI*S 321
SCD KMVRILCNDCGAISDVQFHLIAHKCQN SYNTR I*S
Sbjct: 241 SCDDKMVRILCNDCGAISDVQFHLIAHKCQNCKSYNTRQI*S 366
Score = 183 bits (394), Expect = 9e-046
Identities = 78/102 (76%), Positives = 79/102 (77%)
Frame = -1 / -3
Query: 320 LQIXRVLYXXXFWHLCAIKWNCTSDIAPQSLHNMRTIL*SQESDRXXXXXXSLSXXXXMX 141
LQI RVLY FWHLCAIKWNCTSDIAPQSLHNMRTIL SQESDR SLS M
Sbjct: 365 LQIWRVLYDLQFWHLCAIKWNCTSDIAPQSLHNMRTILSSQESDRVASSMSSLSHAFDMS 186
Query: 140 XXXLEQRGHANWQCSSISFRHFT*MV*XXGRTETSFVESNKY 15
LEQR HANWQCSSIS RHFT*MV* GRTETSFV+SNKY
Sbjct: 185 QTDLEQRAHANWQCSSISLRHFT*MV*PQGRTETSFVDSNKY 60
Score = 181 bits (389), Expect = 5e-045
Identities = 73/110 (66%), Positives = 76/110 (69%)
Frame = -2 / -1
Query: 343 CXXXCDXXFKSXGCCMXXXSGTCAQSNGTAHLILPRSRCIICGPFCDHRSQTEXXXXXXA 164
C C+ F+S GCCM SGTCAQSNGTAHLI PRSRCIICGPF HRSQTE
Sbjct: 388 CRVTCNSYFRSGGCCMTCNSGTCAQSNGTAHLI*PRSRCIICGPFYHHRSQTELPAPCRV 209
Query: 163 FPXXXXCXXXXWSKGGMQTGSALPFLSGTLHEWYDXKAGRKHHLSNRTST 14
P C WSKG MQTGSA PFL GTLHEWYD KAG+KHH S RTST
Sbjct: 208 SPMPSTCHKPTWSKGRMQTGSAPPFL*GTLHEWYDHKAGQKHHSSTRTST 59
Score = 170 bits (365), Expect = 9e-042
Identities = 77/105 (73%), Positives = 81/105 (77%)
Frame = -3 / -2
Query: 330 AXXTSNLAGVV*XXILALVRNQMELHI*YCPAVVA*YADHFVITGVRQXXXXXXEPFPXX 151
A TS+LAGVV* ILALVRNQMELHI*Y PAVVA*YADHF+ITGVRQ E P
Sbjct: 375 AILTSDLAGVV*LAILALVRNQMELHI*YSPAVVA*YADHFIITGVRQSCQLHVESLPCL 196
Query: 150 XHVXXXXGAKGACKLAVLFHFFQALYMNGMTXRQDGNIICRIEQV 16
HV GAKGACKLAVL HFF+ALYMNGMT RQD NII R+EQV
Sbjct: 195 RHVTNRLGAKGACKLAVLLHFFEALYMNGMTTRQDRNIIRRLEQV 61
Score = 159 bits (341), Expect = 2e-038
Identities = 71/102 (69%), Positives = 74/102 (72%)
Frame = +3 / +3
Query: 15 VLVRFDK*CFRPAXXSYHSCKVPERNGRALPVCMPPLLQXXXXHXXXXGKAXXXXXXSV* 194
VLVR D+*CF PA SYHSCKVP+RNG ALPVCM PLLQ H G+ SV*
Sbjct: 60 VLVRVDE*CFCPALWSYHSCKVPQRNGGALPVCMRPLLQVGL*HVEGMGETRHGAGNSV* 239
Query: 195 LL*SQNGPHIMQRLRGNIRCAVPFDCAQVPEXXXIQHPXDLK 320
LL* NGPHIMQRLRG IRCAVPFDCAQVPE IQHP DLK
Sbjct: 240 LL***NGPHIMQRLRGYIRCAVPFDCAQVPELQVIQHPPDLK 365
Score = 149 bits (321), Expect = 1e-035
Identities = 67/109 (61%), Positives = 70/109 (64%)
Frame = +2 / +2
Query: 17 TCSIRQMMFPSCLXVIPFMXXXXXXXXXXXXLHAPFAPXXXXTXXXXGKGSXXXXXLCLT 196
TCS R+MMF SCL VIPFM LHAPFAP T G+ S LCLT
Sbjct: 62 TCSSRRMMFLSCLVVIPFM*SASKKWRSTASLHAPFAPSRFVTCRRHGRDSTWSWQLCLT 241
Query: 197 PVITKWSAYYATTAGQYQMCSSI*LRTSARXXXHTTPARFEVXIAXXXT 343
PV+ KWSAYYATTAG YQMCSSI*LRTSAR HTTPAR EV IA T
Sbjct: 242 PVMIKWSAYYATTAGLYQMCSSI*LRTSARIASHTTPARSEVRIASHTT 388
>gb|AW680764.1|AW680764 WS1_7_B09.b1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA, mRNA
sequence
Length = 574
Score = 166 bits (357), Expect = 1e-040
Identities = 68/87 (78%), Positives = 68/87 (78%)
Frame = +1 / +2
Query: 61 HTIHVKCLKEMEEHCQFACPLCSXXXXXMXXXXERLXXXXXXLSDSCDHKMVRILCNDCG 240
HTIHVKCLKEMEEHCQFACPLCS M ERL LSDSCD KMVRILCNDCG
Sbjct: 11 HTIHVKCLKEMEEHCQFACPLCSKSVCDMSKAWERLDMELATLSDSCDDKMVRILCNDCG 190
Query: 241 AISDVQFHLIAHKCQNXXSYNTRXI*S 321
AISDVQFHLIAHKCQN SYNTR I*S
Sbjct: 191 AISDVQFHLIAHKCQNCKSYNTRQI*S 271
Score = 158 bits (340), Expect = 3e-038
Identities = 63/95 (66%), Positives = 65/95 (68%)
Frame = -2 / -3
Query: 343 CXXXCDXXFKSXGCCMXXXSGTCAQSNGTAHLILPRSRCIICGPFCDHRSQTEXXXXXXA 164
C C+ F+S GCCM SGTCAQSNGTAHLI PRSRCIICGPF HRSQTE
Sbjct: 293 CRVTCNSYFRSGGCCMTCNSGTCAQSNGTAHLI*PRSRCIICGPFYHHRSQTELPAPCRV 114
Query: 163 FPXXXXCXXXXWSKGGMQTGSALPFLSGTLHEWYD 59
P C WSKGGMQTGSA PFL GTLHEWYD
Sbjct: 113 SPMPSTCHKPTWSKGGMQTGSAPPFL*GTLHEWYD 9
Score = 158 bits (339), Expect = 4e-038
Identities = 67/87 (77%), Positives = 67/87 (77%)
Frame = -1 / -2
Query: 320 LQIXRVLYXXXFWHLCAIKWNCTSDIAPQSLHNMRTIL*SQESDRXXXXXXSLSXXXXMX 141
LQI RVLY FWHLCAIKWNCTSDIAPQSLHNMRTIL SQESDR SLS M
Sbjct: 270 LQIWRVLYDLQFWHLCAIKWNCTSDIAPQSLHNMRTILSSQESDRVASSMSSLSHAFDMS 91
Query: 140 XXXLEQRGHANWQCSSISFRHFT*MV* 60
LEQRGHANWQCSSIS RHFT*MV*
Sbjct: 90 QTDLEQRGHANWQCSSISLRHFT*MV* 10
Score = 149 bits (319), Expect = 2e-035
Identities = 67/91 (73%), Positives = 70/91 (76%)
Frame = -3 / -1
Query: 330 AXXTSNLAGVV*XXILALVRNQMELHI*YCPAVVA*YADHFVITGVRQXXXXXXEPFPXX 151
A TS+LAGVV* ILALVRNQMELHI*Y PAVVA*YADHF+ITGVRQ E P
Sbjct: 280 AILTSDLAGVV*LAILALVRNQMELHI*YSPAVVA*YADHFIITGVRQSCQLHVESLPCL 101
Query: 150 XHVXXXXGAKGACKLAVLFHFFQALYMNGMT 58
HV GAKGACKLAVL HFF+ALYMNGMT
Sbjct: 100 RHVTNRLGAKGACKLAVLLHFFEALYMNGMT 8
Score = 144 bits (308), Expect = 7e-034
Identities = 63/90 (70%), Positives = 65/90 (72%)
Frame = +3 / +1
Query: 51 AXXSYHSCKVPERNGRALPVCMPPLLQXXXXHXXXXGKAXXXXXXSV*LL*SQNGPHIMQ 230
A SYHSCKVP+RNG ALPVCMPPLLQ H G+ SV*LL* NGPHIMQ
Sbjct: 1 ARGSYHSCKVPQRNGGALPVCMPPLLQVGL*HVEGMGETRHGAGNSV*LL***NGPHIMQ 180
Query: 231 RLRGNIRCAVPFDCAQVPEXXXIQHPXDLK 320
RLRG IRCAVPFDCAQVPE IQHP DLK
Sbjct: 181 RLRGYIRCAVPFDCAQVPELQVIQHPPDLK 270
Score = 126 bits (270), Expect = 1e-028
Identities = 57/95 (60%), Positives = 59/95 (62%)
Frame = +2 / +3
Query: 59 VIPFMXXXXXXXXXXXXLHAPFAPXXXXTXXXXGKGSXXXXXLCLTPVITKWSAYYATTA 238
VIPFM LHAPFAP T G+ S LCLTPV+ KWSAYYATTA
Sbjct: 9 VIPFM*SASKKWRSTASLHAPFAPSRFVTCRRHGRDSTWSWQLCLTPVMIKWSAYYATTA 188
Query: 239 GQYQMCSSI*LRTSARXXXHTTPARFEVXIAXXXT 343
G YQMCSSI*LRTSAR HTTPAR EV IA T
Sbjct: 189 GLYQMCSSI*LRTSARIASHTTPARSEVRIASHTT 293
>gb|AW746681.1|AW746681 WS1_54_H03.g1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 547
Score = 166 bits (357), Expect = 1e-040
Identities = 68/87 (78%), Positives = 68/87 (78%)
Frame = +1 / +3
Query: 61 HTIHVKCLKEMEEHCQFACPLCSXXXXXMXXXXERLXXXXXXLSDSCDHKMVRILCNDCG 240
HTIHVKCLKEMEEHCQFACPLCS M ERL LSDSCD KMVRILCNDCG
Sbjct: 3 HTIHVKCLKEMEEHCQFACPLCSKSVCDMSKAWERLDMELATLSDSCDDKMVRILCNDCG 182
Query: 241 AISDVQFHLIAHKCQNXXSYNTRXI*S 321
AISDVQFHLIAHKCQN SYNTR I*S
Sbjct: 183 AISDVQFHLIAHKCQNCKSYNTRQI*S 263
Score = 160 bits (343), Expect = 1e-038
Identities = 64/95 (67%), Positives = 65/95 (68%)
Frame = -2 / -2
Query: 343 CXXXCDXXFKSXGCCMXXXSGTCAQSNGTAHLILPRSRCIICGPFCDHRSQTEXXXXXXA 164
C C+ FKS GCCM SGTCAQSNGTAHLI PRSRCIICGPF HRSQTE
Sbjct: 285 CRVTCNSYFKSGGCCMTCNSGTCAQSNGTAHLI*PRSRCIICGPFYHHRSQTELPAPCRV 106
Query: 163 FPXXXXCXXXXWSKGGMQTGSALPFLSGTLHEWYD 59
P C WSKGGMQTGSA PFL GTLHEWYD
Sbjct: 105 SPMPSTCHKPTWSKGGMQTGSAPPFL*GTLHEWYD 1
Score = 158 bits (339), Expect = 4e-038
Identities = 67/87 (77%), Positives = 67/87 (77%)
Frame = -1 / -1
Query: 320 LQIXRVLYXXXFWHLCAIKWNCTSDIAPQSLHNMRTIL*SQESDRXXXXXXSLSXXXXMX 141
LQI RVLY FWHLCAIKWNCTSDIAPQSLHNMRTIL SQESDR SLS M
Sbjct: 262 LQIWRVLYDLQFWHLCAIKWNCTSDIAPQSLHNMRTILSSQESDRVASSMSSLSHAFDMS 83
Query: 140 XXXLEQRGHANWQCSSISFRHFT*MV* 60
LEQRGHANWQCSSIS RHFT*MV*
Sbjct: 82 QTDLEQRGHANWQCSSISLRHFT*MV* 2
Score = 149 bits (319), Expect = 2e-035
Identities = 67/90 (74%), Positives = 69/90 (76%)
Frame = -3 / -3
Query: 330 AXXTSNLAGVV*XXILALVRNQMELHI*YCPAVVA*YADHFVITGVRQXXXXXXEPFPXX 151
A TSNLAGVV* ILALVRNQMELHI*Y PAVVA*YADHF+ITGVRQ E P
Sbjct: 272 AILTSNLAGVV*LAILALVRNQMELHI*YSPAVVA*YADHFIITGVRQSCQLHVESLPCL 93
Query: 150 XHVXXXXGAKGACKLAVLFHFFQALYMNGM 61
HV GAKGACKLAVL HFF+ALYMNGM
Sbjct: 92 RHVTNRLGAKGACKLAVLLHFFEALYMNGM 3
Score = 143 bits (306), Expect = 1e-033
Identities = 62/87 (71%), Positives = 64/87 (73%)
Frame = +3 / +2
Query: 60 SYHSCKVPERNGRALPVCMPPLLQXXXXHXXXXGKAXXXXXXSV*LL*SQNGPHIMQRLR 239
SYHSCKVP+RNG ALPVCMPPLLQ H G+ SV*LL* NGPHIMQRLR
Sbjct: 2 SYHSCKVPQRNGGALPVCMPPLLQVGL*HVEGMGETRHGAGNSV*LL***NGPHIMQRLR 181
Query: 240 GNIRCAVPFDCAQVPEXXXIQHPXDLK 320
G IRCAVPFDCAQVPE IQHP DLK
Sbjct: 182 GYIRCAVPFDCAQVPELQVIQHPPDLK 262
Score = 130 bits (278), Expect = 9e-030
Identities = 58/95 (61%), Positives = 60/95 (63%)
Frame = +2 / +1
Query: 59 VIPFMXXXXXXXXXXXXLHAPFAPXXXXTXXXXGKGSXXXXXLCLTPVITKWSAYYATTA 238
VIPFM LHAPFAP T G+ S LCLTPV+ KWSAYYATTA
Sbjct: 1 VIPFM*SASKKWRSTASLHAPFAPSRFVTCRRHGRDSTWSWQLCLTPVMIKWSAYYATTA 180
Query: 239 GQYQMCSSI*LRTSARXXXHTTPARFEVXIAXXXT 343
G YQMCSSI*LRTSAR HTTPARFEV IA T
Sbjct: 181 GLYQMCSSI*LRTSARIASHTTPARFEVRIASHTT 285
>gb|CD211575.1|CD211575 HS1_63_F12.b1_A012 Heat-shocked seedlings Sorghum bicolor cDNA
clone HS1_63_F12_A012 3', mRNA sequence
Length = 757
Score = 166 bits (357), Expect = 1e-040
Identities = 68/87 (78%), Positives = 68/87 (78%)
Frame = +1 / +1
Query: 61 HTIHVKCLKEMEEHCQFACPLCSXXXXXMXXXXERLXXXXXXLSDSCDHKMVRILCNDCG 240
HTIHVKCLKEMEEHCQFACPLCS M ERL LSDSCD KMVRILCNDCG
Sbjct: 1 HTIHVKCLKEMEEHCQFACPLCSKSVCDMSKAWERLDMELATLSDSCDDKMVRILCNDCG 180
Query: 241 AISDVQFHLIAHKCQNXXSYNTRXI*S 321
AISDVQFHLIAHKCQN SYNTR I*S
Sbjct: 181 AISDVQFHLIAHKCQNCKSYNTRQI*S 261
Score = 157 bits (338), Expect = 5e-038
Identities = 66/86 (76%), Positives = 66/86 (76%)
Frame = -1 / -3
Query: 320 LQIXRVLYXXXFWHLCAIKWNCTSDIAPQSLHNMRTIL*SQESDRXXXXXXSLSXXXXMX 141
LQI RVLY FWHLCAIKWNCTSDIAPQSLHNMRTIL SQESDR SLS M
Sbjct: 260 LQIWRVLYDLQFWHLCAIKWNCTSDIAPQSLHNMRTILSSQESDRVASSMSSLSHAFDMS 81
Query: 140 XXXLEQRGHANWQCSSISFRHFT*MV 63
LEQRGHANWQCSSIS RHFT*MV
Sbjct: 80 QTDLEQRGHANWQCSSISLRHFT*MV 3
Score = 155 bits (334), Expect = 2e-037
Identities = 62/94 (65%), Positives = 64/94 (68%)
Frame = -2 / -1
Query: 343 CXXXCDXXFKSXGCCMXXXSGTCAQSNGTAHLILPRSRCIICGPFCDHRSQTEXXXXXXA 164
C C+ F+S GCCM SGTCAQSNGTAHLI PRSRCIICGPF HRSQTE
Sbjct: 283 CRVTCNSYFRSGGCCMTCNSGTCAQSNGTAHLI*PRSRCIICGPFYHHRSQTELPAPCRV 104
Query: 163 FPXXXXCXXXXWSKGGMQTGSALPFLSGTLHEWY 62
P C WSKGGMQTGSA PFL GTLHEWY
Sbjct: 103 SPMPSTCHKPTWSKGGMQTGSAPPFL*GTLHEWY 2
Score = 146 bits (314), Expect = 1e-034
Identities = 66/90 (73%), Positives = 69/90 (76%)
Frame = -3 / -2
Query: 330 AXXTSNLAGVV*XXILALVRNQMELHI*YCPAVVA*YADHFVITGVRQXXXXXXEPFPXX 151
A TS+LAGVV* ILALVRNQMELHI*Y PAVVA*YADHF+ITGVRQ E P
Sbjct: 270 AILTSDLAGVV*LAILALVRNQMELHI*YSPAVVA*YADHFIITGVRQSCQLHVESLPCL 91
Query: 150 XHVXXXXGAKGACKLAVLFHFFQALYMNGM 61
HV GAKGACKLAVL HFF+ALYMNGM
Sbjct: 90 RHVTNRLGAKGACKLAVLLHFFEALYMNGM 1
Score = 141 bits (302), Expect = 5e-033
Identities = 61/86 (70%), Positives = 63/86 (73%)
Frame = +3 / +3
Query: 63 YHSCKVPERNGRALPVCMPPLLQXXXXHXXXXGKAXXXXXXSV*LL*SQNGPHIMQRLRG 242
YHSCKVP+RNG ALPVCMPPLLQ H G+ SV*LL* NGPHIMQRLRG
Sbjct: 3 YHSCKVPQRNGGALPVCMPPLLQVGL*HVEGMGETRHGAGNSV*LL***NGPHIMQRLRG 182
Query: 243 NIRCAVPFDCAQVPEXXXIQHPXDLK 320
IRCAVPFDCAQVPE IQHP DLK
Sbjct: 183 YIRCAVPFDCAQVPELQVIQHPPDLK 260
Score = 124 bits (266), Expect = 4e-028
Identities = 56/94 (59%), Positives = 58/94 (61%)
Frame = +2 / +2
Query: 62 IPFMXXXXXXXXXXXXLHAPFAPXXXXTXXXXGKGSXXXXXLCLTPVITKWSAYYATTAG 241
IPFM LHAPFAP T G+ S LCLTPV+ KWSAYYATTAG
Sbjct: 2 IPFM*SASKKWRSTASLHAPFAPSRFVTCRRHGRDSTWSWQLCLTPVMIKWSAYYATTAG 181
Query: 242 QYQMCSSI*LRTSARXXXHTTPARFEVXIAXXXT 343
YQMCSSI*LRTSAR HTTPAR EV IA T
Sbjct: 182 LYQMCSSI*LRTSARIASHTTPARSEVRIASHTT 283
>gb|CD212152.1|CD212152 HS1_71_G04.b1_A012 Heat-shocked seedlings Sorghum bicolor cDNA
clone HS1_71_G04_A012 3', mRNA sequence
Length = 628
Score = 166 bits (357), Expect = 1e-040
Identities = 68/87 (78%), Positives = 68/87 (78%)
Frame = +1 / +3
Query: 61 HTIHVKCLKEMEEHCQFACPLCSXXXXXMXXXXERLXXXXXXLSDSCDHKMVRILCNDCG 240
HTIHVKCLKEMEEHCQFACPLCS M ERL LSDSCD KMVRILCNDCG
Sbjct: 3 HTIHVKCLKEMEEHCQFACPLCSKSVCDMSKAWERLDMELATLSDSCDDKMVRILCNDCG 182
Query: 241 AISDVQFHLIAHKCQNXXSYNTRXI*S 321
AISDVQFHLIAHKCQN SYNTR I*S
Sbjct: 183 AISDVQFHLIAHKCQNCKSYNTRQI*S 263
Score = 158 bits (340), Expect = 3e-038
Identities = 63/95 (66%), Positives = 65/95 (68%)
Frame = -2 / -2
Query: 343 CXXXCDXXFKSXGCCMXXXSGTCAQSNGTAHLILPRSRCIICGPFCDHRSQTEXXXXXXA 164
C C+ F+S GCCM SGTCAQSNGTAHLI PRSRCIICGPF HRSQTE
Sbjct: 285 CRVTCNSYFRSGGCCMTCNSGTCAQSNGTAHLI*PRSRCIICGPFYHHRSQTELPAPCRV 106
Query: 163 FPXXXXCXXXXWSKGGMQTGSALPFLSGTLHEWYD 59
P C WSKGGMQTGSA PFL GTLHEWYD
Sbjct: 105 SPMPSTCHKPTWSKGGMQTGSAPPFL*GTLHEWYD 1
Score = 158 bits (339), Expect = 4e-038
Identities = 67/87 (77%), Positives = 67/87 (77%)
Frame = -1 / -1
Query: 320 LQIXRVLYXXXFWHLCAIKWNCTSDIAPQSLHNMRTIL*SQESDRXXXXXXSLSXXXXMX 141
LQI RVLY FWHLCAIKWNCTSDIAPQSLHNMRTIL SQESDR SLS M
Sbjct: 262 LQIWRVLYDLQFWHLCAIKWNCTSDIAPQSLHNMRTILSSQESDRVASSMSSLSHAFDMS 83
Query: 140 XXXLEQRGHANWQCSSISFRHFT*MV* 60
LEQRGHANWQCSSIS RHFT*MV*
Sbjct: 82 QTDLEQRGHANWQCSSISLRHFT*MV* 2
Score = 146 bits (314), Expect = 1e-034
Identities = 66/90 (73%), Positives = 69/90 (76%)
Frame = -3 / -3
Query: 330 AXXTSNLAGVV*XXILALVRNQMELHI*YCPAVVA*YADHFVITGVRQXXXXXXEPFPXX 151
A TS+LAGVV* ILALVRNQMELHI*Y PAVVA*YADHF+ITGVRQ E P
Sbjct: 272 AILTSDLAGVV*LAILALVRNQMELHI*YSPAVVA*YADHFIITGVRQSCQLHVESLPCL 93
Query: 150 XHVXXXXGAKGACKLAVLFHFFQALYMNGM 61
HV GAKGACKLAVL HFF+ALYMNGM
Sbjct: 92 RHVTNRLGAKGACKLAVLLHFFEALYMNGM 3
Score = 143 bits (306), Expect = 1e-033
Identities = 62/87 (71%), Positives = 64/87 (73%)
Frame = +3 / +2
Query: 60 SYHSCKVPERNGRALPVCMPPLLQXXXXHXXXXGKAXXXXXXSV*LL*SQNGPHIMQRLR 239
SYHSCKVP+RNG ALPVCMPPLLQ H G+ SV*LL* NGPHIMQRLR
Sbjct: 2 SYHSCKVPQRNGGALPVCMPPLLQVGL*HVEGMGETRHGAGNSV*LL***NGPHIMQRLR 181
Query: 240 GNIRCAVPFDCAQVPEXXXIQHPXDLK 320
G IRCAVPFDCAQVPE IQHP DLK
Sbjct: 182 GYIRCAVPFDCAQVPELQVIQHPPDLK 262
Score = 126 bits (270), Expect = 1e-028
Identities = 57/95 (60%), Positives = 59/95 (62%)
Frame = +2 / +1
Query: 59 VIPFMXXXXXXXXXXXXLHAPFAPXXXXTXXXXGKGSXXXXXLCLTPVITKWSAYYATTA 238
VIPFM LHAPFAP T G+ S LCLTPV+ KWSAYYATTA
Sbjct: 1 VIPFM*SASKKWRSTASLHAPFAPSRFVTCRRHGRDSTWSWQLCLTPVMIKWSAYYATTA 180
Query: 239 GQYQMCSSI*LRTSARXXXHTTPARFEVXIAXXXT 343
G YQMCSSI*LRTSAR HTTPAR EV IA T
Sbjct: 181 GLYQMCSSI*LRTSARIASHTTPARSEVRIASHTT 285
>gb|CN135327.1|CN135327 OX1_32_C03.b1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_32_C03_A002 3', mRNA sequence
Length = 605
Score = 166 bits (357), Expect = 1e-040
Identities = 68/87 (78%), Positives = 68/87 (78%)
Frame = +1 / +3
Query: 61 HTIHVKCLKEMEEHCQFACPLCSXXXXXMXXXXERLXXXXXXLSDSCDHKMVRILCNDCG 240
HTIHVKCLKEMEEHCQFACPLCS M ERL LSDSCD KMVRILCNDCG
Sbjct: 3 HTIHVKCLKEMEEHCQFACPLCSKSVCDMSKAWERLDMELATLSDSCDDKMVRILCNDCG 182
Query: 241 AISDVQFHLIAHKCQNXXSYNTRXI*S 321
AISDVQFHLIAHKCQN SYNTR I*S
Sbjct: 183 AISDVQFHLIAHKCQNCKSYNTRQI*S 263
Score = 158 bits (340), Expect = 3e-038
Identities = 63/95 (66%), Positives = 65/95 (68%)
Frame = -2 / -3
Query: 343 CXXXCDXXFKSXGCCMXXXSGTCAQSNGTAHLILPRSRCIICGPFCDHRSQTEXXXXXXA 164
C C+ F+S GCCM SGTCAQSNGTAHLI PRSRCIICGPF HRSQTE
Sbjct: 285 CRVTCNSYFRSGGCCMTCNSGTCAQSNGTAHLI*PRSRCIICGPFYHHRSQTELPAPCRV 106
Query: 163 FPXXXXCXXXXWSKGGMQTGSALPFLSGTLHEWYD 59
P C WSKGGMQTGSA PFL GTLHEWYD
Sbjct: 105 SPMPSTCHKPTWSKGGMQTGSAPPFL*GTLHEWYD 1
Score = 158 bits (339), Expect = 4e-038
Identities = 67/87 (77%), Positives = 67/87 (77%)
Frame = -1 / -2
Query: 320 LQIXRVLYXXXFWHLCAIKWNCTSDIAPQSLHNMRTIL*SQESDRXXXXXXSLSXXXXMX 141
LQI RVLY FWHLCAIKWNCTSDIAPQSLHNMRTIL SQESDR SLS M
Sbjct: 262 LQIWRVLYDLQFWHLCAIKWNCTSDIAPQSLHNMRTILSSQESDRVASSMSSLSHAFDMS 83
Query: 140 XXXLEQRGHANWQCSSISFRHFT*MV* 60
LEQRGHANWQCSSIS RHFT*MV*
Sbjct: 82 QTDLEQRGHANWQCSSISLRHFT*MV* 2
Score = 146 bits (314), Expect = 1e-034
Identities = 66/90 (73%), Positives = 69/90 (76%)
Frame = -3 / -1
Query: 330 AXXTSNLAGVV*XXILALVRNQMELHI*YCPAVVA*YADHFVITGVRQXXXXXXEPFPXX 151
A TS+LAGVV* ILALVRNQMELHI*Y PAVVA*YADHF+ITGVRQ E P
Sbjct: 272 AILTSDLAGVV*LAILALVRNQMELHI*YSPAVVA*YADHFIITGVRQSCQLHVESLPCL 93
Query: 150 XHVXXXXGAKGACKLAVLFHFFQALYMNGM 61
HV GAKGACKLAVL HFF+ALYMNGM
Sbjct: 92 RHVTNRLGAKGACKLAVLLHFFEALYMNGM 3
Score = 143 bits (306), Expect = 1e-033
Identities = 62/87 (71%), Positives = 64/87 (73%)
Frame = +3 / +2
Query: 60 SYHSCKVPERNGRALPVCMPPLLQXXXXHXXXXGKAXXXXXXSV*LL*SQNGPHIMQRLR 239
SYHSCKVP+RNG ALPVCMPPLLQ H G+ SV*LL* NGPHIMQRLR
Sbjct: 2 SYHSCKVPQRNGGALPVCMPPLLQVGL*HVEGMGETRHGAGNSV*LL***NGPHIMQRLR 181
Query: 240 GNIRCAVPFDCAQVPEXXXIQHPXDLK 320
G IRCAVPFDCAQVPE IQHP DLK
Sbjct: 182 GYIRCAVPFDCAQVPELQVIQHPPDLK 262
Score = 126 bits (270), Expect = 1e-028
Identities = 57/95 (60%), Positives = 59/95 (62%)
Frame = +2 / +1
Query: 59 VIPFMXXXXXXXXXXXXLHAPFAPXXXXTXXXXGKGSXXXXXLCLTPVITKWSAYYATTA 238
VIPFM LHAPFAP T G+ S LCLTPV+ KWSAYYATTA
Sbjct: 1 VIPFM*SASKKWRSTASLHAPFAPSRFVTCRRHGRDSTWSWQLCLTPVMIKWSAYYATTA 180
Query: 239 GQYQMCSSI*LRTSARXXXHTTPARFEVXIAXXXT 343
G YQMCSSI*LRTSAR HTTPAR EV IA T
Sbjct: 181 GLYQMCSSI*LRTSARIASHTTPARSEVRIASHTT 285
>gb|CL173030.1|CL173030 104_376_10890597_116_31795_117 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10890597, DNA
sequence
Length = 751
Score = 86.8 bits (183), Expect(3) = 1e-038
Identities = 32/44 (72%), Positives = 34/44 (77%)
Frame = -2 / +1
Query: 343 CXXXCDXXFKSXGCCMXXXSGTCAQSNGTAHLILPRSRCIICGP 212
C C+ F+S GCCM SGTCAQSNGTAHLI PRSRCIICGP
Sbjct: 40 CRVTCNSYFRSGGCCMTCNSGTCAQSNGTAHLI*PRSRCIICGP 171
Score = 85.4 bits (180), Expect(3) = 5e-038
Identities = 33/43 (76%), Positives = 36/43 (83%)
Frame = -1 / +3
Query: 320 LQIXRVLYXXXFWHLCAIKWNCTSDIAPQSLHNMRTIL*SQES 192
LQI RVLY FWHLCAIKWNCTSDIAPQSLHNMRT + ++ S
Sbjct: 63 LQIWRVLYDLQFWHLCAIKWNCTSDIAPQSLHNMRTYMGTKSS 191
Score = 81.3 bits (171), Expect(3) = 2e-040
Identities = 33/36 (91%), Positives = 33/36 (91%)
Frame = +1 / -1
Query: 214 VRILCNDCGAISDVQFHLIAHKCQNXXSYNTRXI*S 321
VRILCNDCGAISDVQFHLIAHKCQN SYNTR I*S
Sbjct: 169 VRILCNDCGAISDVQFHLIAHKCQNCKSYNTRQI*S 62
Score = 79.4 bits (167), Expect(3) = 5e-032
Identities = 32/39 (82%), Positives = 32/39 (82%)
Frame = +3 / -3
Query: 204 SQNGPHIMQRLRGNIRCAVPFDCAQVPEXXXIQHPXDLK 320
S GPHIMQRLRG IRCAVPFDCAQVPE IQHP DLK
Sbjct: 179 SHVGPHIMQRLRGYIRCAVPFDCAQVPELQVIQHPPDLK 63
Score = 75.3 bits (158), Expect(3) = 2e-040
Identities = 30/38 (78%), Positives = 32/38 (84%)
Frame = +1 / -2
Query: 13 RYLFDSTNDVSVLPXXHTIHVKCLKEMEEHCQFACPLC 126
+YLF+STNDVSVLP HTIHVKCLKEMEEHCQ A C
Sbjct: 639 QYLFESTNDVSVLPCGHTIHVKCLKEMEEHCQ*AGSSC 526
Score = 68.9 bits (144), Expect(2) = 2e-023
Identities = 33/39 (84%), Positives = 34/39 (87%)
Frame = -3 / +2
Query: 330 AXXTSNLAGVV*XXILALVRNQMELHI*YCPAVVA*YAD 214
A TS+LAGVV* ILALVRNQMELHI*Y PAVVA*YAD
Sbjct: 53 AILTSDLAGVV*LAILALVRNQMELHI*YSPAVVA*YAD 169
Score = 67.0 bits (140), Expect(3) = 5e-038
Identities = 29/37 (78%), Positives = 30/37 (81%)
Frame = -1 / +2
Query: 125 QRGHANWQCSSISFRHFT*MV*XXGRTETSFVESNKY 15
Q A WQCSSIS RHFT*MV* GRTETSFV+SNKY
Sbjct: 527 QEEPAYWQCSSISLRHFT*MV*PQGRTETSFVDSNKY 637
Score = 66.1 bits (138), Expect(3) = 1e-038
Identities = 26/32 (81%), Positives = 27/32 (84%)
Frame = -2 / +3
Query: 109 TGSALPFLSGTLHEWYDXKAGRKHHLSNRTST 14
TGSA PFL GTLHEWYD KAG+KHH S RTST
Sbjct: 543 TGSAPPFL*GTLHEWYDHKAGQKHHSSTRTST 638
Score = 61.6 bits (128), Expect(3) = 5e-032
Identities = 25/32 (78%), Positives = 27/32 (84%)
Frame = +3 / -1
Query: 15 VLVRFDK*CFRPAXXSYHSCKVPERNGRALPV 110
VLVR D+*CF PA SYHSCKVP+RNG ALPV
Sbjct: 637 VLVRVDE*CFCPALWSYHSCKVPQRNGGALPV 542
Score = 60.6 bits (126), Expect(2) = 2e-023
Identities = 25/31 (80%), Positives = 27/31 (87%)
Frame = -3 / +1
Query: 108 LAVLFHFFQALYMNGMTXRQDGNIICRIEQV 16
LAVL HFF+ALYMNGMT RQD NII R+EQV
Sbjct: 544 LAVLLHFFEALYMNGMTTRQDRNIIRRLEQV 636
Score = 47.3 bits (97), Expect(3) = 2e-040
Identities = 20/37 (54%), Positives = 21/37 (56%)
Frame = +1 / -2
Query: 106 QFACPLCSXXXXXMXXXXERLXXXXXXLSDSCDHKMV 216
+FACPLCS M ERL LSDSCD KMV
Sbjct: 471 RFACPLCSKSVCDMSKAWERLDMELATLSDSCDDKMV 361
Score = 45.1 bits (92), Expect(3) = 1e-038
Identities = 22/41 (53%), Positives = 23/41 (56%)
Frame = -1 / +2
Query: 215 TIL*SQESDRXXXXXXSLSXXXXMXXXXLEQRGHANWQCSS 93
TIL SQESDR SLS M LEQRGHAN + S
Sbjct: 362 TILSSQESDRVASSMSSLSHAFDMSQTDLEQRGHANLEIYS 484
Score = 43.2 bits (88), Expect(3) = 5e-038
Identities = 18/36 (50%), Positives = 18/36 (50%)
Frame = -2 / +3
Query: 214 PFCDHRSQTEXXXXXXAFPXXXXCXXXXWSKGGMQT 107
PF HRSQTE P C WSKGGMQT
Sbjct: 363 PFYHHRSQTELPAPCRVSPMPSTCHKPTWSKGGMQT 470
Score = 34.5 bits (69), Expect(3) = 5e-032
Identities = 19/38 (50%), Positives = 20/38 (52%)
Frame = +3 / -1
Query: 102 LPVCMPPLLQXXXXHXXXXGKAXXXXXXSV*LL*SQNG 215
L VCMPPLLQ H G+ SV*LL* NG
Sbjct: 475 LQVCMPPLLQVGL*HVEGMGETRHGAGNSV*LL***NG 362
>gb|CW209293.1|CW209293 104_639_11189160_116_36988_092 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11189160, DNA
sequence
Length = 678
Score = 84.0 bits (177), Expect(3) = 3e-038
Identities = 32/43 (74%), Positives = 36/43 (83%)
Frame = -1 / -3
Query: 320 LQIXRVLYXXXFWHLCAIKWNCTSDIAPQSLHNMRTIL*SQES 192
LQI R+LY FWHLCAIKWNCTSDIAPQSLHNMRT + ++ S
Sbjct: 667 LQIWRLLYDLQFWHLCAIKWNCTSDIAPQSLHNMRTYMGTKSS 539
Score = 83.5 bits (176), Expect(3) = 8e-038
Identities = 31/40 (77%), Positives = 33/40 (82%)
Frame = -2 / -1
Query: 331 CDXXFKSXGCCMXXXSGTCAQSNGTAHLILPRSRCIICGP 212
C+ F+S GCCM SGTCAQSNGTAHLI PRSRCIICGP
Sbjct: 678 CNSYFRSGGCCMTCNSGTCAQSNGTAHLI*PRSRCIICGP 559
Score = 79.0 bits (166), Expect(3) = 4e-040
Identities = 32/36 (88%), Positives = 32/36 (88%)
Frame = +1 / +3
Query: 214 VRILCNDCGAISDVQFHLIAHKCQNXXSYNTRXI*S 321
VRILCNDCGAISDVQFHLIAHKCQN SYN R I*S
Sbjct: 561 VRILCNDCGAISDVQFHLIAHKCQNCKSYNNRQI*S 668
Score = 75.8 bits (159), Expect(3) = 2e-031
Identities = 31/39 (79%), Positives = 31/39 (79%)
Frame = +3 / +2
Query: 204 SQNGPHIMQRLRGNIRCAVPFDCAQVPEXXXIQHPXDLK 320
S GPHIMQRLRG IRCAVPFDCAQVPE IQ P DLK
Sbjct: 551 SHVGPHIMQRLRGYIRCAVPFDCAQVPELQVIQQPPDLK 667
Score = 75.3 bits (158), Expect(3) = 4e-040
Identities = 30/38 (78%), Positives = 32/38 (84%)
Frame = +1 / +1
Query: 13 RYLFDSTNDVSVLPXXHTIHVKCLKEMEEHCQFACPLC 126
+YLF+STNDVSVLP HTIHVKCLKEMEEHCQ A C
Sbjct: 91 QYLFESTNDVSVLPCGHTIHVKCLKEMEEHCQ*AGSSC 204
Score = 67.0 bits (140), Expect(3) = 8e-038
Identities = 29/37 (78%), Positives = 30/37 (81%)
Frame = -1 / -2
Query: 125 QRGHANWQCSSISFRHFT*MV*XXGRTETSFVESNKY 15
Q A WQCSSIS RHFT*MV* GRTETSFV+SNKY
Sbjct: 203 QEEPAYWQCSSISLRHFT*MV*PQGRTETSFVDSNKY 93
Score = 66.1 bits (138), Expect(3) = 3e-038
Identities = 26/32 (81%), Positives = 27/32 (84%)
Frame = -2 / -3
Query: 109 TGSALPFLSGTLHEWYDXKAGRKHHLSNRTST 14
TGSA PFL GTLHEWYD KAG+KHH S RTST
Sbjct: 187 TGSAPPFL*GTLHEWYDHKAGQKHHSSTRTST 92
Score = 64.8 bits (135), Expect(2) = 1e-022
Identities = 32/39 (82%), Positives = 33/39 (84%)
Frame = -3 / -2
Query: 330 AXXTSNLAGVV*XXILALVRNQMELHI*YCPAVVA*YAD 214
A TS+LA VV* ILALVRNQMELHI*Y PAVVA*YAD
Sbjct: 677 AILTSDLAVVV*LAILALVRNQMELHI*YSPAVVA*YAD 561
Score = 61.6 bits (128), Expect(3) = 2e-031
Identities = 25/32 (78%), Positives = 27/32 (84%)
Frame = +3 / +3
Query: 15 VLVRFDK*CFRPAXXSYHSCKVPERNGRALPV 110
VLVR D+*CF PA SYHSCKVP+RNG ALPV
Sbjct: 93 VLVRVDE*CFCPALWSYHSCKVPQRNGGALPV 188
Score = 60.6 bits (126), Expect(2) = 1e-022
Identities = 25/31 (80%), Positives = 27/31 (87%)
Frame = -3 / -1
Query: 108 LAVLFHFFQALYMNGMTXRQDGNIICRIEQV 16
LAVL HFF+ALYMNGMT RQD NII R+EQV
Sbjct: 186 LAVLLHFFEALYMNGMTTRQDRNIIRRLEQV 94
Score = 47.3 bits (97), Expect(3) = 4e-040
Identities = 20/37 (54%), Positives = 21/37 (56%)
Frame = +1 / +1
Query: 106 QFACPLCSXXXXXMXXXXERLXXXXXXLSDSCDHKMV 216
+FACPLCS M ERL LSDSCD KMV
Sbjct: 259 RFACPLCSKSVCDMSKAWERLDMELATLSDSCDDKMV 369
Score = 45.1 bits (92), Expect(3) = 3e-038
Identities = 22/41 (53%), Positives = 23/41 (56%)
Frame = -1 / -2
Query: 215 TIL*SQESDRXXXXXXSLSXXXXMXXXXLEQRGHANWQCSS 93
TIL SQESDR SLS M LEQRGHAN + S
Sbjct: 368 TILSSQESDRVASSMSSLSHAFDMSQTDLEQRGHANLEIYS 246
Score = 43.2 bits (88), Expect(3) = 8e-038
Identities = 18/36 (50%), Positives = 18/36 (50%)
Frame = -2 / -3
Query: 214 PFCDHRSQTEXXXXXXAFPXXXXCXXXXWSKGGMQT 107
PF HRSQTE P C WSKGGMQT
Sbjct: 367 PFYHHRSQTELPAPCRVSPMPSTCHKPTWSKGGMQT 260
Score = 34.5 bits (69), Expect(3) = 2e-031
Identities = 19/38 (50%), Positives = 20/38 (52%)
Frame = +3 / +3
Query: 102 LPVCMPPLLQXXXXHXXXXGKAXXXXXXSV*LL*SQNG 215
L VCMPPLLQ H G+ SV*LL* NG
Sbjct: 255 LQVCMPPLLQVGL*HVEGMGETRHGAGNSV*LL***NG 368
>gb|CD210972.1|CD210972 HS1_58_D09.b1_A012 Heat-shocked seedlings Sorghum bicolor cDNA
clone HS1_58_D09_A012 3', mRNA sequence
Length = 730
Score = 160 bits (344), Expect = 7e-039
Identities = 66/85 (77%), Positives = 66/85 (77%)
Frame = +1 / +2
Query: 67 IHVKCLKEMEEHCQFACPLCSXXXXXMXXXXERLXXXXXXLSDSCDHKMVRILCNDCGAI 246
IHVKCLKEMEEHCQFACPLCS M ERL LSDSCD KMVRILCNDCGAI
Sbjct: 2 IHVKCLKEMEEHCQFACPLCSKSVCDMSKAWERLDMELATLSDSCDDKMVRILCNDCGAI 181
Query: 247 SDVQFHLIAHKCQNXXSYNTRXI*S 321
SDVQFHLIAHKCQN SYNTR I*S
Sbjct: 182 SDVQFHLIAHKCQNCKSYNTRQI*S 256
Score = 155 bits (334), Expect = 2e-037
Identities = 65/85 (76%), Positives = 65/85 (76%)
Frame = -1 / -2
Query: 320 LQIXRVLYXXXFWHLCAIKWNCTSDIAPQSLHNMRTIL*SQESDRXXXXXXSLSXXXXMX 141
LQI RVLY FWHLCAIKWNCTSDIAPQSLHNMRTIL SQESDR SLS M
Sbjct: 255 LQIWRVLYDLQFWHLCAIKWNCTSDIAPQSLHNMRTILSSQESDRVASSMSSLSHAFDMS 76
Query: 140 XXXLEQRGHANWQCSSISFRHFT*M 66
LEQRGHANWQCSSIS RHFT*M
Sbjct: 75 QTDLEQRGHANWQCSSISLRHFT*M 1
Score = 147 bits (316), Expect = 5e-035
Identities = 60/92 (65%), Positives = 62/92 (67%)
Frame = -2 / -3
Query: 343 CXXXCDXXFKSXGCCMXXXSGTCAQSNGTAHLILPRSRCIICGPFCDHRSQTEXXXXXXA 164
C C+ F+S GCCM SGTCAQSNGTAHLI PRSRCIICGPF HRSQTE
Sbjct: 278 CRVTCNSYFRSGGCCMTCNSGTCAQSNGTAHLI*PRSRCIICGPFYHHRSQTELPAPCRV 99
Query: 163 FPXXXXCXXXXWSKGGMQTGSALPFLSGTLHE 68
P C WSKGGMQTGSA PFL GTLHE
Sbjct: 98 SPMPSTCHKPTWSKGGMQTGSAPPFL*GTLHE 3
Score = 141 bits (303), Expect = 3e-033
Identities = 64/88 (72%), Positives = 67/88 (76%)
Frame = -3 / -1
Query: 330 AXXTSNLAGVV*XXILALVRNQMELHI*YCPAVVA*YADHFVITGVRQXXXXXXEPFPXX 151
A TS+LAGVV* ILALVRNQMELHI*Y PAVVA*YADHF+ITGVRQ E P
Sbjct: 265 AILTSDLAGVV*LAILALVRNQMELHI*YSPAVVA*YADHFIITGVRQSCQLHVESLPCL 86
Query: 150 XHVXXXXGAKGACKLAVLFHFFQALYMN 67
HV GAKGACKLAVL HFF+ALYMN
Sbjct: 85 RHVTNRLGAKGACKLAVLLHFFEALYMN 2
Score = 138 bits (295), Expect = 4e-032
Identities = 60/85 (70%), Positives = 62/85 (72%)
Frame = +3 / +1
Query: 66 HSCKVPERNGRALPVCMPPLLQXXXXHXXXXGKAXXXXXXSV*LL*SQNGPHIMQRLRGN 245
HSCKVP+RNG ALPVCMPPLLQ H G+ SV*LL* NGPHIMQRLRG
Sbjct: 1 HSCKVPQRNGGALPVCMPPLLQVGL*HVEGMGETRHGAGNSV*LL***NGPHIMQRLRGY 180
Query: 246 IRCAVPFDCAQVPEXXXIQHPXDLK 320
IRCAVPFDCAQVPE IQHP DLK
Sbjct: 181 IRCAVPFDCAQVPELQVIQHPPDLK 255
Score = 119 bits (255), Expect = 1e-026
Identities = 54/92 (58%), Positives = 56/92 (60%)
Frame = +2 / +3
Query: 68 FMXXXXXXXXXXXXLHAPFAPXXXXTXXXXGKGSXXXXXLCLTPVITKWSAYYATTAGQY 247
FM LHAPFAP T G+ S LCLTPV+ KWSAYYATTAG Y
Sbjct: 3 FM*SASKKWRSTASLHAPFAPSRFVTCRRHGRDSTWSWQLCLTPVMIKWSAYYATTAGLY 182
Query: 248 QMCSSI*LRTSARXXXHTTPARFEVXIAXXXT 343
QMCSSI*LRTSAR HTTPAR EV IA T
Sbjct: 183 QMCSSI*LRTSARIASHTTPARSEVRIASHTT 278
>gb|AW677678.1|AW677678 WS1_10_F06.b1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 595
Score = 105 bits (225), Expect(2) = 4e-038
Identities = 45/59 (76%), Positives = 45/59 (76%)
Frame = +1 / +3
Query: 145 MXXXXERLXXXXXXLSDSCDHKMVRILCNDCGAISDVQFHLIAHKCQNXXSYNTRXI*S 321
M ERL LSDSCD KMVRILCNDCGAISDVQFHLIAHKCQN SYNTR I*S
Sbjct: 294 MSKAWERLDMELATLSDSCDDKMVRILCNDCGAISDVQFHLIAHKCQNCKSYNTRQI*S 470
Score = 104 bits (222), Expect(2) = 5e-036
Identities = 44/59 (74%), Positives = 44/59 (74%)
Frame = -1 / -1
Query: 320 LQIXRVLYXXXFWHLCAIKWNCTSDIAPQSLHNMRTIL*SQESDRXXXXXXSLSXXXXM 144
LQI RVLY FWHLCAIKWNCTSDIAPQSLHNMRTIL SQESDR SLS M
Sbjct: 469 LQIWRVLYDLQFWHLCAIKWNCTSDIAPQSLHNMRTILSSQESDRVASSMSSLSHAFDM 293
Score = 104 bits (221), Expect(2) = 2e-035
Identities = 41/67 (61%), Positives = 43/67 (64%)
Frame = -2 / -2
Query: 343 CXXXCDXXFKSXGCCMXXXSGTCAQSNGTAHLILPRSRCIICGPFCDHRSQTEXXXXXXA 164
C C+ F+S GCCM SGTCAQSNGTAHLI PRSRCIICGPF HRSQTE
Sbjct: 492 CRVTCNSYFRSGGCCMTCNSGTCAQSNGTAHLI*PRSRCIICGPFYHHRSQTELPAPCRV 313
Query: 163 FPXXXXC 143
P C
Sbjct: 312 SPMPSTC 292
Score = 101 bits (216), Expect(2) = 2e-033
Identities = 44/62 (70%), Positives = 46/62 (74%)
Frame = +2 / +1
Query: 158 GKGSXXXXXLCLTPVITKWSAYYATTAGQYQMCSSI*LRTSARXXXHTTPARFEVXIAXX 337
G+ S LCLTPV+ KWSAYYATTAG YQMCSSI*LRTSAR HTTPAR EV IA
Sbjct: 307 GRDSTWSWQLCLTPVMIKWSAYYATTAGLYQMCSSI*LRTSARIASHTTPARSEVRIASH 486
Query: 338 XT 343
T
Sbjct: 487 TT 492
Score = 95.9 bits (203), Expect(2) = 1e-031
Identities = 45/63 (71%), Positives = 47/63 (74%)
Frame = -3 / -3
Query: 330 AXXTSNLAGVV*XXILALVRNQMELHI*YCPAVVA*YADHFVITGVRQXXXXXXEPFPXX 151
A TS+LAGVV* ILALVRNQMELHI*Y PAVVA*YADHF+ITGVRQ E P
Sbjct: 479 AILTSDLAGVV*LAILALVRNQMELHI*YSPAVVA*YADHFIITGVRQSCQLHVESLPCL 300
Query: 150 XHV 142
HV
Sbjct: 299 RHV 291
Score = 89.0 bits (188), Expect(2) = 3e-023
Identities = 40/59 (67%), Positives = 41/59 (69%)
Frame = +3 / +2
Query: 144 HXXXXGKAXXXXXXSV*LL*SQNGPHIMQRLRGNIRCAVPFDCAQVPEXXXIQHPXDLK 320
H G+ SV*LL* NGPHIMQRLRG IRCAVPFDCAQVPE IQHP DLK
Sbjct: 293 HVEGMGETRHGAGNSV*LL***NGPHIMQRLRGYIRCAVPFDCAQVPELQVIQHPPDLK 469
Score = 71.2 bits (149), Expect(2) = 4e-038
Identities = 27/30 (90%), Positives = 28/30 (93%)
Frame = +1 / +1
Query: 16 YLFDSTNDVSVLPXXHTIHVKCLKEMEEHC 105
YLF+STNDVSVLP HTIHVKCLKEMEEHC
Sbjct: 190 YLFESTNDVSVLPCGHTIHVKCLKEMEEHC 279
Score = 65.7 bits (137), Expect(2) = 5e-036
Identities = 27/31 (87%), Positives = 28/31 (90%)
Frame = -1 / -3
Query: 107 WQCSSISFRHFT*MV*XXGRTETSFVESNKY 15
WQCSSIS RHFT*MV* GRTETSFV+SNKY
Sbjct: 281 WQCSSISLRHFT*MV*PQGRTETSFVDSNKY 189
Score = 63.8 bits (133), Expect(2) = 2e-035
Identities = 25/31 (80%), Positives = 26/31 (83%)
Frame = -2 / -1
Query: 106 GSALPFLSGTLHEWYDXKAGRKHHLSNRTST 14
GSA PFL GTLHEWYD KAG+KHH S RTST
Sbjct: 280 GSAPPFL*GTLHEWYDHKAGQKHHSSTRTST 188
Score = 59.7 bits (124), Expect(2) = 1e-031
Identities = 24/31 (77%), Positives = 27/31 (87%)
Frame = -3 / -2
Query: 108 LAVLFHFFQALYMNGMTXRQDGNIICRIEQV 16
+AVL HFF+ALYMNGMT RQD NII R+EQV
Sbjct: 282 MAVLLHFFEALYMNGMTTRQDRNIIRRLEQV 190
Score = 59.7 bits (124), Expect(2) = 2e-033
Identities = 24/31 (77%), Positives = 26/31 (83%)
Frame = +3 / +3
Query: 15 VLVRFDK*CFRPAXXSYHSCKVPERNGRALP 107
VLVR D+*CF PA SYHSCKVP+RNG ALP
Sbjct: 189 VLVRVDE*CFCPALWSYHSCKVPQRNGGALP 281
Score = 38.2 bits (77), Expect(2) = 3e-023
Identities = 15/19 (78%), Positives = 16/19 (84%)
Frame = +2 / +2
Query: 17 TCSIRQMMFPSCLXVIPFM 73
TCS R+MMF SCL VIPFM
Sbjct: 191 TCSSRRMMFLSCLVVIPFM 247
>gb|CD211415.1|CD211415 HS1_60_B03.b1_A012 Heat-shocked seedlings Sorghum bicolor cDNA
clone HS1_60_B03_A012 3', mRNA sequence
Length = 734
Score = 144 bits (310), Expect = 4e-034
Identities = 60/79 (75%), Positives = 60/79 (75%)
Frame = +1 / +2
Query: 85 KEMEEHCQFACPLCSXXXXXMXXXXERLXXXXXXLSDSCDHKMVRILCNDCGAISDVQFH 264
KEMEEHCQFACPLCS M ERL LSDSCD KMVRILCNDCGAISDVQFH
Sbjct: 2 KEMEEHCQFACPLCSKSVCDMSKAWERLDMELATLSDSCDDKMVRILCNDCGAISDVQFH 181
Query: 265 LIAHKCQNXXSYNTRXI*S 321
LIAHKCQN SYNTR I*S
Sbjct: 182 LIAHKCQNCKSYNTRQI*S 238
Score = 142 bits (304), Expect = 2e-033
Identities = 59/78 (75%), Positives = 59/78 (75%)
Frame = -1 / -3
Query: 320 LQIXRVLYXXXFWHLCAIKWNCTSDIAPQSLHNMRTIL*SQESDRXXXXXXSLSXXXXMX 141
LQI RVLY FWHLCAIKWNCTSDIAPQSLHNMRTIL SQESDR SLS M
Sbjct: 237 LQIWRVLYDLQFWHLCAIKWNCTSDIAPQSLHNMRTILSSQESDRVASSMSSLSHAFDMS 58
Query: 140 XXXLEQRGHANWQCSSIS 87
LEQRGHANWQCSSIS
Sbjct: 57 QTDLEQRGHANWQCSSIS 4
Score = 136 bits (292), Expect = 1e-031
Identities = 55/86 (63%), Positives = 57/86 (66%)
Frame = -2 / -1
Query: 343 CXXXCDXXFKSXGCCMXXXSGTCAQSNGTAHLILPRSRCIICGPFCDHRSQTEXXXXXXA 164
C C+ F+S GCCM SGTCAQSNGTAHLI PRSRCIICGPF HRSQTE
Sbjct: 260 CRVTCNSYFRSGGCCMTCNSGTCAQSNGTAHLI*PRSRCIICGPFYHHRSQTELPAPCRV 81
Query: 163 FPXXXXCXXXXWSKGGMQTGSALPFL 86
P C WSKGGMQTGSA PFL
Sbjct: 80 SPMPSTCHKPTWSKGGMQTGSAPPFL 3
Score = 128 bits (275), Expect = 2e-029
Identities = 59/82 (71%), Positives = 61/82 (74%)
Frame = -3 / -2
Query: 330 AXXTSNLAGVV*XXILALVRNQMELHI*YCPAVVA*YADHFVITGVRQXXXXXXEPFPXX 151
A TS+LAGVV* ILALVRNQMELHI*Y PAVVA*YADHF+ITGVRQ E P
Sbjct: 247 AILTSDLAGVV*LAILALVRNQMELHI*YSPAVVA*YADHFIITGVRQSCQLHVESLPCL 68
Query: 150 XHVXXXXGAKGACKLAVLFHFF 85
HV GAKGACKLAVL HFF
Sbjct: 67 RHVTNRLGAKGACKLAVLLHFF 2
Score = 121 bits (258), Expect = 5e-027
Identities = 54/79 (68%), Positives = 56/79 (70%)
Frame = +3 / +1
Query: 84 ERNGRALPVCMPPLLQXXXXHXXXXGKAXXXXXXSV*LL*SQNGPHIMQRLRGNIRCAVP 263
+RNG ALPVCMPPLLQ H G+ SV*LL* NGPHIMQRLRG IRCAVP
Sbjct: 1 QRNGGALPVCMPPLLQVGL*HVEGMGETRHGAGNSV*LL***NGPHIMQRLRGYIRCAVP 180
Query: 264 FDCAQVPEXXXIQHPXDLK 320
FDCAQVPE IQHP DLK
Sbjct: 181 FDCAQVPELQVIQHPPDLK 237
Score = 118 bits (253), Expect = 3e-026
Identities = 52/78 (66%), Positives = 54/78 (69%)
Frame = +2 / +3
Query: 110 LHAPFAPXXXXTXXXXGKGSXXXXXLCLTPVITKWSAYYATTAGQYQMCSSI*LRTSARX 289
LHAPFAP T G+ S LCLTPV+ KWSAYYATTAG YQMCSSI*LRTSAR
Sbjct: 27 LHAPFAPSRFVTCRRHGRDSTWSWQLCLTPVMIKWSAYYATTAGLYQMCSSI*LRTSARI 206
Query: 290 XXHTTPARFEVXIAXXXT 343
HTTPAR EV IA T
Sbjct: 207 ASHTTPARSEVRIASHTT 260
>gb|CL167683.1|CL167683 104_364_10810249_114_31802_313 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10810249, DNA
sequence
Length = 726
Score = 75.3 bits (158), Expect(3) = 8e-027
Identities = 30/38 (78%), Positives = 32/38 (84%)
Frame = +1 / +1
Query: 13 RYLFDSTNDVSVLPXXHTIHVKCLKEMEEHCQFACPLC 126
+YLF+STNDVSVLP HTIHVKCLKEMEEHCQ A C
Sbjct: 214 QYLFESTNDVSVLPCGHTIHVKCLKEMEEHCQ*AGSSC 327
Score = 67.0 bits (140), Expect(3) = 5e-023
Identities = 29/37 (78%), Positives = 30/37 (81%)
Frame = -1 / -2
Query: 125 QRGHANWQCSSISFRHFT*MV*XXGRTETSFVESNKY 15
Q A WQCSSIS RHFT*MV* GRTETSFV+SNKY
Sbjct: 326 QEEPAYWQCSSISLRHFT*MV*PQGRTETSFVDSNKY 216
Score = 66.1 bits (138), Expect(3) = 3e-024
Identities = 26/32 (81%), Positives = 27/32 (84%)
Frame = -2 / -3
Query: 109 TGSALPFLSGTLHEWYDXKAGRKHHLSNRTST 14
TGSA PFL GTLHEWYD KAG+KHH S RTST
Sbjct: 310 TGSAPPFL*GTLHEWYDHKAGQKHHSSTRTST 215
Score = 47.3 bits (97), Expect(3) = 8e-027
Identities = 20/37 (54%), Positives = 21/37 (56%)
Frame = +1 / +1
Query: 106 QFACPLCSXXXXXMXXXXERLXXXXXXLSDSCDHKMV 216
+FACPLCS M ERL LSDSCD KMV
Sbjct: 382 RFACPLCSKSVCDMSKAWERLDMELATLSDSCDDKMV 492
Score = 45.1 bits (92), Expect(3) = 3e-024
Identities = 22/41 (53%), Positives = 23/41 (56%)
Frame = -1 / -2
Query: 215 TIL*SQESDRXXXXXXSLSXXXXMXXXXLEQRGHANWQCSS 93
TIL SQESDR SLS M LEQRGHAN + S
Sbjct: 491 TILSSQESDRVASSMSSLSHAFDMSQTDLEQRGHANLEIYS 369
Score = 43.2 bits (88), Expect(3) = 5e-023
Identities = 18/36 (50%), Positives = 18/36 (50%)
Frame = -2 / -3
Query: 214 PFCDHRSQTEXXXXXXAFPXXXXCXXXXWSKGGMQT 107
PF HRSQTE P C WSKGGMQT
Sbjct: 490 PFYHHRSQTELPAPCRVSPMPSTCHKPTWSKGGMQT 383
Score = 37.7 bits (76), Expect(3) = 3e-024
Identities = 14/15 (93%), Positives = 14/15 (93%)
Frame = -2 / -1
Query: 256 AHLILPRSRCIICGP 212
AHLI PRSRCIICGP
Sbjct: 726 AHLI*PRSRCIICGP 682
Score = 35.0 bits (70), Expect(3) = 8e-027
Identities = 13/14 (92%), Positives = 14/14 (100%)
Frame = +1 / +3
Query: 214 VRILCNDCGAISDV 255
VRILCNDCGAIS+V
Sbjct: 684 VRILCNDCGAISNV 725
Score = 34.5 bits (69), Expect(3) = 5e-023
Identities = 14/21 (66%), Positives = 17/21 (80%)
Frame = -1 / -3
Query: 254 TSDIAPQSLHNMRTIL*SQES 192
T DIAPQSLHNMRT + ++ S
Sbjct: 724 TFDIAPQSLHNMRTYMGTKSS 662
>gb|CL167684.1|CL167684 104_364_10810249_116_31803_313 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10810249, DNA
sequence
Length = 757
Score = 86.8 bits (183), Expect(2) = 3e-024
Identities = 32/44 (72%), Positives = 34/44 (77%)
Frame = -2 / +2
Query: 343 CXXXCDXXFKSXGCCMXXXSGTCAQSNGTAHLILPRSRCIICGP 212
C C+ F+S GCCM SGTCAQSNGTAHLI PRSRCIICGP
Sbjct: 275 CRVTCNSYFRSGGCCMTCNSGTCAQSNGTAHLI*PRSRCIICGP 406
Score = 85.4 bits (180), Expect(2) = 3e-023
Identities = 33/43 (76%), Positives = 36/43 (83%)
Frame = -1 / +1
Query: 320 LQIXRVLYXXXFWHLCAIKWNCTSDIAPQSLHNMRTIL*SQES 192
LQI RVLY FWHLCAIKWNCTSDIAPQSLHNMRT + ++ S
Sbjct: 298 LQIWRVLYDLQFWHLCAIKWNCTSDIAPQSLHNMRTYMGTKSS 426
Score = 81.3 bits (171), Expect(2) = 3e-024
Identities = 33/36 (91%), Positives = 33/36 (91%)
Frame = +1 / -3
Query: 214 VRILCNDCGAISDVQFHLIAHKCQNXXSYNTRXI*S 321
VRILCNDCGAISDVQFHLIAHKCQN SYNTR I*S
Sbjct: 404 VRILCNDCGAISDVQFHLIAHKCQNCKSYNTRQI*S 297
Score = 50.6 bits (104), Expect(2) = 3e-024
Identities = 21/43 (48%), Positives = 23/43 (53%)
Frame = +1 / -1
Query: 106 QFACPLCSXXXXXMXXXXERLXXXXXXLSDSCDHKMVRILCND 234
+FACPLCS M ERL LSDSCD KMV C +
Sbjct: 706 RFACPLCSKSVCDMSKAWERLDMELATLSDSCDDKMVIFFCEN 578
Score = 45.1 bits (92), Expect(2) = 3e-024
Identities = 22/41 (53%), Positives = 23/41 (56%)
Frame = -1 / +3
Query: 215 TIL*SQESDRXXXXXXSLSXXXXMXXXXLEQRGHANWQCSS 93
TIL SQESDR SLS M LEQRGHAN + S
Sbjct: 597 TILSSQESDRVASSMSSLSHAFDMSQTDLEQRGHANLEIYS 719
Score = 43.2 bits (88), Expect(2) = 3e-023
Identities = 18/36 (50%), Positives = 18/36 (50%)
Frame = -2 / +1
Query: 214 PFCDHRSQTEXXXXXXAFPXXXXCXXXXWSKGGMQT 107
PF HRSQTE P C WSKGGMQT
Sbjct: 598 PFYHHRSQTELPAPCRVSPMPSTCHKPTWSKGGMQT 705
>gb|CD208906.1|CD208906 HS1_45_A03.b1_A012 Heat-shocked seedlings Sorghum bicolor cDNA
clone HS1_45_A03_A012 3', mRNA sequence
Length = 522
Score = 107 bits (228), Expect = 7e-023
Identities = 42/72 (58%), Positives = 44/72 (61%)
Frame = -2 / -1
Query: 343 CXXXCDXXFKSXGCCMXXXSGTCAQSNGTAHLILPRSRCIICGPFCDHRSQTEXXXXXXA 164
C C+ F+S GCCM SGTCAQSNGTAHLI PRSRCIICGPF HRSQTE
Sbjct: 216 CRVTCNSYFRSGGCCMTCNSGTCAQSNGTAHLI*PRSRCIICGPFYHHRSQTELPAPCRV 37
Query: 163 FPXXXXCXXXXW 128
P C W
Sbjct: 36 SPMPSTCHKPTW 1
Score = 105 bits (225), Expect = 2e-022
Identities = 45/59 (76%), Positives = 45/59 (76%)
Frame = +1 / +3
Query: 145 MXXXXERLXXXXXXLSDSCDHKMVRILCNDCGAISDVQFHLIAHKCQNXXSYNTRXI*S 321
M ERL LSDSCD KMVRILCNDCGAISDVQFHLIAHKCQN SYNTR I*S
Sbjct: 18 MSKAWERLDMELATLSDSCDDKMVRILCNDCGAISDVQFHLIAHKCQNCKSYNTRQI*S 194
Score = 105 bits (224), Expect = 3e-022
Identities = 45/64 (70%), Positives = 45/64 (70%)
Frame = -1 / -3
Query: 320 LQIXRVLYXXXFWHLCAIKWNCTSDIAPQSLHNMRTIL*SQESDRXXXXXXSLSXXXXMX 141
LQI RVLY FWHLCAIKWNCTSDIAPQSLHNMRTIL SQESDR SLS M
Sbjct: 193 LQIWRVLYDLQFWHLCAIKWNCTSDIAPQSLHNMRTILSSQESDRVASSMSSLSHAFDMS 14
Query: 140 XXXL 129
L
Sbjct: 13 QTDL 2
Score = 103 bits (220), Expect = 9e-022
Identities = 46/72 (63%), Positives = 48/72 (66%)
Frame = +2 / +1
Query: 128 PXXXXTXXXXGKGSXXXXXLCLTPVITKWSAYYATTAGQYQMCSSI*LRTSARXXXHTTP 307
P T G+ S LCLTPV+ KWSAYYATTAG YQMCSSI*LRTSAR HTTP
Sbjct: 1 PSRFVTCRRHGRDSTWSWQLCLTPVMIKWSAYYATTAGLYQMCSSI*LRTSARIASHTTP 180
Query: 308 ARFEVXIAXXXT 343
AR EV IA T
Sbjct: 181 ARSEVRIASHTT 216
>gb|CD462225.1|CD462225 SA1_40_H09.b1_A002 Salicylic acid-treated seedlings Sorghum bicolor
cDNA clone SA1_40_H09_A002 3', mRNA sequence
Length = 690
Score = 107 bits (228), Expect = 7e-023
Identities = 42/72 (58%), Positives = 44/72 (61%)
Frame = -2 / -1
Query: 343 CXXXCDXXFKSXGCCMXXXSGTCAQSNGTAHLILPRSRCIICGPFCDHRSQTEXXXXXXA 164
C C+ F+S GCCM SGTCAQSNGTAHLI PRSRCIICGPF HRSQTE
Sbjct: 216 CRVTCNSYFRSGGCCMTCNSGTCAQSNGTAHLI*PRSRCIICGPFYHHRSQTELPAPCRV 37
Query: 163 FPXXXXCXXXXW 128
P C W
Sbjct: 36 SPMPSTCHKPTW 1
Score = 105 bits (225), Expect = 2e-022
Identities = 45/59 (76%), Positives = 45/59 (76%)
Frame = +1 / +3
Query: 145 MXXXXERLXXXXXXLSDSCDHKMVRILCNDCGAISDVQFHLIAHKCQNXXSYNTRXI*S 321
M ERL LSDSCD KMVRILCNDCGAISDVQFHLIAHKCQN SYNTR I*S
Sbjct: 18 MSKAWERLDMELATLSDSCDDKMVRILCNDCGAISDVQFHLIAHKCQNCKSYNTRQI*S 194
Score = 105 bits (224), Expect = 3e-022
Identities = 45/64 (70%), Positives = 45/64 (70%)
Frame = -1 / -3
Query: 320 LQIXRVLYXXXFWHLCAIKWNCTSDIAPQSLHNMRTIL*SQESDRXXXXXXSLSXXXXMX 141
LQI RVLY FWHLCAIKWNCTSDIAPQSLHNMRTIL SQESDR SLS M
Sbjct: 193 LQIWRVLYDLQFWHLCAIKWNCTSDIAPQSLHNMRTILSSQESDRVASSMSSLSHAFDMS 14
Query: 140 XXXL 129
L
Sbjct: 13 QTDL 2
Score = 103 bits (220), Expect = 9e-022
Identities = 46/72 (63%), Positives = 48/72 (66%)
Frame = +2 / +1
Query: 128 PXXXXTXXXXGKGSXXXXXLCLTPVITKWSAYYATTAGQYQMCSSI*LRTSARXXXHTTP 307
P T G+ S LCLTPV+ KWSAYYATTAG YQMCSSI*LRTSAR HTTP
Sbjct: 1 PSRFVTCRRHGRDSTWSWQLCLTPVMIKWSAYYATTAGLYQMCSSI*LRTSARIASHTTP 180
Query: 308 ARFEVXIAXXXT 343
AR EV IA T
Sbjct: 181 ARSEVRIASHTT 216
>gb|CX609224.1|CX609224 ANR1_11_H11.b1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_11_H11_A002 3', mRNA sequence
Length = 753
Score = 63.8 bits (133), Expect(2) = 7e-023
Identities = 25/51 (49%), Positives = 32/51 (62%)
Frame = +1 / +2
Query: 16 YLFDSTNDVSVLPXXHTIHVKCLKEMEEHCQFACPLCSXXXXXMXXXXERL 168
YLFDST +SVL HTIH++CL EM H QF+CP+C M ++L
Sbjct: 194 YLFDSTKAISVLHCGHTIHLECLYEMRAHQQFSCPVCLRSACNMSDIWQKL 346
Score = 62.9 bits (131), Expect(2) = 7e-023
Identities = 22/34 (64%), Positives = 27/34 (79%)
Frame = +1 / +2
Query: 208 KMVRILCNDCGAISDVQFHLIAHKCQNXXSYNTR 309
KM+ ILCNDCG ++VQFH++AHKC SYNTR
Sbjct: 392 KMIWILCNDCGMTANVQFHILAHKCPGCSSYNTR 493
>gb|AW745934.1|AW745934 WS1_38_G07.b1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 476
Score = 68.4 bits (143), Expect(2) = 2e-022
Identities = 25/51 (49%), Positives = 32/51 (62%)
Frame = +1 / +1
Query: 16 YLFDSTNDVSVLPXXHTIHVKCLKEMEEHCQFACPLCSXXXXXMXXXXERL 168
YLFDST D+SVL HTIH++C+ EM H F+CP+CS M +L
Sbjct: 82 YLFDSTKDISVLQCGHTIHLECMNEMRAHHHFSCPVCSRSACDMSATWRKL 234
Score = 56.1 bits (116), Expect(2) = 2e-022
Identities = 21/34 (61%), Positives = 24/34 (70%)
Frame = +1 / +1
Query: 208 KMVRILCNDCGAISDVQFHLIAHKCQNXXSYNTR 309
KMV ILCNDC A S V+FH++ KC SYNTR
Sbjct: 280 KMVWILCNDCSATSSVRFHVLGQKCPGCSSYNTR 381
>gb|BM331418.1|BM331418 PIC1_65_H04.g1_A002 Pathogen-infected compatible 1 (PIC1) Sorghum
bicolor cDNA, mRNA sequence
Length = 541
Score = 105 bits (225), Expect = 2e-022
Identities = 45/59 (76%), Positives = 45/59 (76%)
Frame = +1 / +2
Query: 145 MXXXXERLXXXXXXLSDSCDHKMVRILCNDCGAISDVQFHLIAHKCQNXXSYNTRXI*S 321
M ERL LSDSCD KMVRILCNDCGAISDVQFHLIAHKCQN SYNTR I*S
Sbjct: 17 MSKAWERLDMELATLSDSCDDKMVRILCNDCGAISDVQFHLIAHKCQNCKSYNTRQI*S 193
Score = 105 bits (224), Expect = 3e-022
Identities = 45/64 (70%), Positives = 45/64 (70%)
Frame = -1 / -2
Query: 320 LQIXRVLYXXXFWHLCAIKWNCTSDIAPQSLHNMRTIL*SQESDRXXXXXXSLSXXXXMX 141
LQI RVLY FWHLCAIKWNCTSDIAPQSLHNMRTIL SQESDR SLS M
Sbjct: 192 LQIWRVLYDLQFWHLCAIKWNCTSDIAPQSLHNMRTILSSQESDRVASSMSSLSHAFDMS 13
Query: 140 XXXL 129
L
Sbjct: 12 QTDL 1
Score = 104 bits (221), Expect = 7e-022
Identities = 41/67 (61%), Positives = 43/67 (64%)
Frame = -2 / -3
Query: 343 CXXXCDXXFKSXGCCMXXXSGTCAQSNGTAHLILPRSRCIICGPFCDHRSQTEXXXXXXA 164
C C+ F+S GCCM SGTCAQSNGTAHLI PRSRCIICGPF HRSQTE
Sbjct: 215 CRVTCNSYFRSGGCCMTCNSGTCAQSNGTAHLI*PRSRCIICGPFYHHRSQTELPAPCRV 36
Query: 163 FPXXXXC 143
P C
Sbjct: 35 SPMPSTC 15
Score = 101 bits (216), Expect = 3e-021
Identities = 44/62 (70%), Positives = 46/62 (74%)
Frame = +2 / +3
Query: 158 GKGSXXXXXLCLTPVITKWSAYYATTAGQYQMCSSI*LRTSARXXXHTTPARFEVXIAXX 337
G+ S LCLTPV+ KWSAYYATTAG YQMCSSI*LRTSAR HTTPAR EV IA
Sbjct: 30 GRDSTWSWQLCLTPVMIKWSAYYATTAGLYQMCSSI*LRTSARIASHTTPARSEVRIASH 209
Query: 338 XT 343
T
Sbjct: 210 TT 215
>gb|AW745330.1|AW745330 WS1_33_F10.b1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 580
Score = 68.4 bits (143), Expect(2) = 2e-022
Identities = 25/51 (49%), Positives = 32/51 (62%)
Frame = +1 / +2
Query: 16 YLFDSTNDVSVLPXXHTIHVKCLKEMEEHCQFACPLCSXXXXXMXXXXERL 168
YLFDST D+SVL HTIH++C+ EM H F+CP+CS M +L
Sbjct: 281 YLFDSTKDISVLQCGHTIHLECMNEMRAHHHFSCPVCSRSACDMSATWRKL 433
Score = 56.1 bits (116), Expect(2) = 2e-022
Identities = 21/34 (61%), Positives = 24/34 (70%)
Frame = +1 / +2
Query: 208 KMVRILCNDCGAISDVQFHLIAHKCQNXXSYNTR 309
KMV ILCNDC A S V+FH++ KC SYNTR
Sbjct: 479 KMVWILCNDCSATSSVRFHVLGQKCPGCSSYNTR 580
>gb|BE593477.1|BE593477 WS1_98_C11.b1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 581
Score = 68.4 bits (143), Expect(2) = 2e-022
Identities = 25/51 (49%), Positives = 32/51 (62%)
Frame = +1 / +2
Query: 16 YLFDSTNDVSVLPXXHTIHVKCLKEMEEHCQFACPLCSXXXXXMXXXXERL 168
YLFDST D+SVL HTIH++C+ EM H F+CP+CS M +L
Sbjct: 281 YLFDSTKDISVLQCGHTIHLECMNEMRAHHHFSCPVCSRSACDMSATWRKL 433
Score = 56.1 bits (116), Expect(2) = 2e-022
Identities = 21/34 (61%), Positives = 24/34 (70%)
Frame = +1 / +2
Query: 208 KMVRILCNDCGAISDVQFHLIAHKCQNXXSYNTR 309
KMV ILCNDC A S V+FH++ KC SYNTR
Sbjct: 479 KMVWILCNDCSATSSVRFHVLGQKCPGCSSYNTR 580
>gb|CN134411.1|CN134411 OX1_26_E07.b1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_26_E07_A002 3', mRNA sequence
Length = 812
Score = 68.4 bits (143), Expect(2) = 4e-022
Identities = 25/51 (49%), Positives = 32/51 (62%)
Frame = +1 / +2
Query: 16 YLFDSTNDVSVLPXXHTIHVKCLKEMEEHCQFACPLCSXXXXXMXXXXERL 168
YLFDST D+SVL HTIH++C+ EM H F+CP+CS M +L
Sbjct: 116 YLFDSTKDISVLQCGHTIHLECMNEMRAHHHFSCPVCSRSACDMSATWRKL 268
Score = 56.1 bits (116), Expect(2) = 4e-022
Identities = 21/34 (61%), Positives = 24/34 (70%)
Frame = +1 / +2
Query: 208 KMVRILCNDCGAISDVQFHLIAHKCQNXXSYNTR 309
KMV ILCNDC A S V+FH++ KC SYNTR
Sbjct: 314 KMVWILCNDCSATSSVRFHVLGQKCPGCSSYNTR 415
>gb|CN148546.1|CN148546 WOUND1_57_F11.b1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_57_F11_A002 3', mRNA sequence
Length = 828
Score = 68.4 bits (143), Expect(2) = 2e-021
Identities = 25/51 (49%), Positives = 32/51 (62%)
Frame = +1 / +3
Query: 16 YLFDSTNDVSVLPXXHTIHVKCLKEMEEHCQFACPLCSXXXXXMXXXXERL 168
YLFDST D+SVL HTIH++C+ EM H F+CP+CS M +L
Sbjct: 135 YLFDSTKDISVLQCGHTIHLECMNEMRAHHHFSCPVCSRSACDMSATWRKL 287
Score = 53.3 bits (110), Expect(2) = 2e-021
Identities = 20/34 (58%), Positives = 23/34 (67%)
Frame = +1 / +3
Query: 208 KMVRILCNDCGAISDVQFHLIAHKCQNXXSYNTR 309
KMV ILCNDC A S V+ H++ KC SYNTR
Sbjct: 333 KMVWILCNDCSATSSVRLHVLGQKCPGCSSYNTR 434
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 337,275,810
Number of Sequences: 832831
Number of extensions: 3317655
Number of successful extensions: 213616
Number of sequences better than 1.0e-020: 28
length of database: 163,786,556
effective HSP length: 51
effective length of database: 121,312,175
effective search space used: 7642667025
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)