TBLASTX 2.2.10 [Oct-19-2004]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= QAF12e06.yg.2.1
         (561 letters)

Database: Sorghum_nucl_with_EST.fasta 
           832,831 sequences; 491,359,669 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AC169370.3|  Sorghum bicolor clone SB_BBc0011I20, WORKING...   224   e-103
gb|BI212063.1|BI212063  IP1_61_B03.g1_A002 Immature pannicle...   184   7e-046
gb|CN140420.1|CN140420  OX1_36_B10.b1_A002 Oxidatively-stres...    84   3e-034
gb|CD210962.1|CD210962  HS1_58_B05.b1_A012 Heat-shocked seed...   143   3e-033
gb|CW037385.1|CW037385  104_269_10504310_115_30384 Sorghum m...   135   6e-031
gb|CN149194.1|CN149194  WOUND1_61_F10.b1_A002 Wounded leaves...    84   6e-030
gb|BI139893.1|BI139893  IP1_47_A12.b1_A002 Immature pannicle...    97   7e-030
gb|CW306008.1|CW306008  104_791_11466607_148_36273_024 Sorgh...    78   8e-026
gb|BZ628082.1|BZ628082  ih57h02.g1 WGS-SbicolorF (DH5a methy...   107   2e-022
gb|CF487333.1|CF487333  POL1_43_D11.b1_A002 Pollen Sorghum b...    91   2e-022
gb|CF485968.1|CF485968  POL1_34_H03.g1_A002 Pollen Sorghum b...   106   3e-022
gb|CW144377.1|CW144377  104_536_11137911_148_34962_056 Sorgh...    91   5e-022
>gb|AC169370.3| Sorghum bicolor clone SB_BBc0011I20, WORKING DRAFT SEQUENCE, 9
             unordered pieces
          Length = 143922

 Score =  224 bits (483), Expect(2) = e-103
 Identities = 92/106 (86%), Positives = 99/106 (93%)
 Frame = +3 / -3

                                                                         
Query: 3     ISIFGLSHFLLPDLLPSLNRVVVLDDDLIVQKDLSPLWNLDMGGKVIGAVQFCGVRLGQL 182
             ISIFG SHFLLPDLLPSLNRVVVLDDDLIVQKDLS LWNLDMGGKVIGAVQFC VRLGQL
Sbjct: 66934 ISIFGHSHFLLPDLLPSLNRVVVLDDDLIVQKDLSSLWNLDMGGKVIGAVQFCEVRLGQL 66755

                                                           
Query: 183   KPYIADHNVDDDSCVWLSGLNVIELDKWRDTGITSLHDQSVQKLRK 320
             KPY+ADHNV+ +SCVWLSGLNV+ELDKWRD GITSL+DQS QK+ +
Sbjct: 66754 KPYMADHNVNANSCVWLSGLNVVELDKWRDMGITSLYDQSFQKVSR 66617

 Score =  221 bits (477), Expect(2) = 4e-091
 Identities = 90/103 (87%), Positives = 94/103 (91%)
 Frame = -3 / +3

                                                                         
Query: 310   FWTD*SCKLVMPVSLHLSNSMTFRPDNHTHESSSTLWSAI*GFSCPNLTPQNWTAPITLP 131
             FW D*S KLVMP+SLHLSNS TF+PDNHTHE + TLWSAI*GF+ PNLT QNWTAPITLP
Sbjct: 66627 FWND*SYKLVMPMSLHLSNSTTFKPDNHTHELALTLWSAI*GFNWPNLTSQNWTAPITLP 66806

                                                        
Query: 130   PISRFHRGDKSFWTIKSSSRTTTLFKLGRRSGKRKCERPKIDM 2
             PISRFHR DKSFWTIKSSSRTTTLFKLGRRSGKRKCE PKIDM
Sbjct: 66807 PISRFHRDDKSFWTIKSSSRTTTLFKLGRRSGKRKCEWPKIDM 66935

 Score =  190 bits (410), Expect(2) = 3e-081
 Identities = 81/102 (79%), Positives = 83/102 (81%)
 Frame = -1 / +1

                                                                         
Query: 306   GLIDHANW*CQCPSIYPIQ*HSGPTTTHMNHHRRYGLLYKVSAALISLHRTGLLQSLYHP 127
             G IDH N *C CPSIYPIQ HS   TTHMN H  YGL YKVS  LISLHRTG  QSLYHP
Sbjct: 66631 GTIDHTNL*CPCPSIYPIQRHSSQITTHMN*H*HYGLPYKVSTGLISLHRTGQHQSLYHP 66810

                                                       
Query: 126   YRGSIEVTSPSGQSNHHPEQLLYSS*EEGQARGNVKGRR*IC 1
             YRGS E+TS SGQSNHHPEQLLYSS*EEGQARGNV GR+*IC
Sbjct: 66811 YRGSTEMTSLSGQSNHHPEQLLYSS*EEGQARGNVNGRK*IC 66936

 Score =  187 bits (403), Expect(2) = 3e-081
 Identities = 86/103 (83%), Positives = 91/103 (88%)
 Frame = +1 / -1

                                                                         
Query: 1     TYLSSAFHISSCLTFFLA*IE*LFWMMI*LSRRTCHLYGTSIWVVK*LEQSSSVE*D*GS 180
             TYL SA HISSCLTFFLA*IE*LFWMMI*LSR+TCHL GTSIWVVK*L  SSSV+*D* S
Sbjct: 66936 TYLFSAIHISSCLTFFLA*IE*LFWMMI*LSRKTCHLCGTSIWVVK*LVLSSSVK*D*AS 66757

                                                        
Query: 181   *NLI*QTITSMMIHVCGCRA*MSLNWINGGTLALPVCMINQSR 309
             *NLI QTI SM+IHVCG  A*MSLNWINGGT AL VCMIN+S+
Sbjct: 66756 *NLIWQTIMSMLIHVCGYLA*MSLNWINGGTWALQVCMINRSK 66628

 Score =  181 bits (390), Expect(2) = e-103
 Identities = 71/80 (88%), Positives = 76/80 (95%)
 Frame = +3 / -1

                                                                         
Query: 309   KLRKDSLKSQRLQALPAGLLAFQDLVYPLEDSWVESGLGHDYGISHVDIEKAATLHYNGV 488
             +LRKD LKSQR QALPA LLAFQDLVYPLEDSWV+SGLGHDYGISHVDIEKAATLHYNGV
Sbjct: 66468 QLRKDRLKSQRFQALPASLLAFQDLVYPLEDSWVQSGLGHDYGISHVDIEKAATLHYNGV 66289

                                 
Query: 489   MKPWLDLGILDYKNYWRKYL 548
             MKPWLDLGI DYK+YWR+Y+
Sbjct: 66288 MKPWLDLGIHDYKSYWREYM 66229

 Score =  160 bits (345), Expect(2) = 8e-066
 Identities = 75/105 (71%), Positives = 82/105 (78%)
 Frame = -2 / +2

                                                                         
Query: 317   SQLLD*LIMQTGNASVPPFIQFNDIQARQPHT*IIIDVMVCYIRFQLP*SHSTELDCSNH 138
             + LL+ LI+QT NA VPPFIQFNDIQAR PHT*I ID+MVC+IRFQL *SH TELD +NH
Sbjct: 66620 TDLLERLIIQTCNAHVPPFIQFNDIQAR*PHT*ISIDIMVCHIRFQLA*SHFTELDSTNH 66799

                                                          
Query: 137   FTTHIEVP*R*QVLLDXXXXXXXXXXXQARKKVRQEEM*KAEDRY 3
             FTTHIEVP R*QV LD           QARKKVRQEEM* AE+RY
Sbjct: 66800 FTTHIEVPQR*QVFLDNQIIIQNNYSIQARKKVRQEEM*MAENRY 66934

 Score =  158 bits (339), Expect(2) = 2e-071
 Identities = 71/103 (68%), Positives = 76/103 (73%)
 Frame = +2 / -2

                                                                         
Query: 2     HIYLRPFTFPLA*PXXXXXXXXXXG**FDCPEGLVTSMEPRYGW*SDWSSPVLWSEIRAA 181
             HIY RPFTFPLA*P          G**FDCPE LV S+EPRYGW*SDW  PVL SEIR  
Sbjct: 66935 HIYFRPFTFPLA*PSS*LE*SSCSG**FDCPERLVISVEPRYGW*SDWCCPVL*SEIRPV 66756

                                                        
Query: 182   ETLYSRP*RR**FMCVVVGPECH*IG*MEGHWHYQFA*SISPE 310
             ETLY RP* + *FMCVV+  EC *IG*MEGH HY+F *SI P+
Sbjct: 66755 ETLYGRP*CQC*FMCVVIWLECR*IG*MEGHGHYKFV*SIVPK 66627

 Score =  144 bits (310), Expect(2) = 3e-081
 Identities = 61/78 (78%), Positives = 66/78 (84%)
 Frame = +2 / -3

                                                                         
Query: 311   VAKGQPEISATASTPCRSTCLSRPGISFGRFMG*VRPWT*LWNQPCRYREGCYSALQWCD 490
             VAKG PEI+A + TPC+ TCLSR GISFGRFMG +RPWT*LWN   RYR+GCYSAL WCD
Sbjct: 66466 VAKGPPEITAISGTPCKFTCLSRSGISFGRFMGSIRPWT*LWN*SRRYRKGCYSAL*WCD 66287

                               
Query: 491   ETLA*LGDT*LQELLEEV 544
             ETLA*LGDT*L ELLE V
Sbjct: 66286 ETLA*LGDT*L*ELLEGV 66233

 Score =  144 bits (308), Expect(2) = 4e-091
 Identities = 62/71 (87%), Positives = 67/71 (94%)
 Frame = -2 / +1

                                                                         
Query: 521   IKYPQVKPRFHHTIVVQSSSLLYIDMADSIIMSKA*LNP*IFQRIYQVLKGK*TCRECLQ 342
             I YPQVKPRFHHTI+VQSSSL YID+ +SIIMSKA*LNP*IFQRIYQ+LKGK*TCRECL+
Sbjct: 66256 IMYPQVKPRFHHTIIVQSSSLFYIDVTNSIIMSKA*LNP*IFQRIYQILKGK*TCRECLK 66435

                        
Query: 341   SLRFQAVLSQL 309
             SL FQAVLSQL
Sbjct: 66436 SL*FQAVLSQL 66468

 Score =  141 bits (303), Expect(2) = 2e-071
 Identities = 60/73 (82%), Positives = 64/73 (87%)
 Frame = +1 / -2

                                                                         
Query: 304   SRSCERTA*NLSDCKHSLQVYLPFKTWYILWKIHGLSQALDMIMESAMSI*RRLLLCTTM 483
             S SCERTA*N SD +HSLQVYLPFK WYILWKIHG +QALDMIME   SI*+RLLLCT M
Sbjct: 66473 SCSCERTA*NHSDFRHSLQVYLPFKIWYILWKIHGFNQALDMIMELVTSI*KRLLLCTIM 66294

                          
Query: 484   V**NLGLTWGYLI 522
             V**NLGLTWGY+I
Sbjct: 66293 V**NLGLTWGYMI 66255

 Score =  141 bits (303), Expect(2) = 3e-081
 Identities = 67/78 (85%), Positives = 69/78 (88%)
 Frame = -3 / +2

                                                                         
Query: 544   YFLQ*FL*SSIPKSSQGFITPL*CRVAAFSISTWLIP*SCPRPDSTHESSKGYTRS*KAS 365
             Y LQ* L*S IPKSSQGFITPL*CRVAAFSIST LIP*SCPRPD THESSKGYTRS*KAS
Sbjct: 66233 YSLQ*LL*SCIPKSSQGFITPL*CRVAAFSIST*LIP*SCPRPD*THESSKGYTRS*KAS 66412

                               
Query: 364   RPAGSACSR*DFRLSFRN 311
             + AGSA +R DFR SFRN
Sbjct: 66413 KLAGSA*NRCDFRRSFRN 66466

 Score =  120 bits (256), Expect(2) = 8e-066
 Identities = 52/66 (78%), Positives = 56/66 (84%)
 Frame = -1 / +3

                                                                         
Query: 504   QAKVSSHHCSAE*QPSLYRHG*FHNHVQGLTQPMNLPKDIPGLERQVDLQGVLAVAEISG 325
             QAKVSSHH SAE*QP LYR  *FHNHVQGL +PMNLPKDIP LERQV+LQGV  +A ISG
Sbjct: 66273 QAKVSSHHYSAE*QPFLYRRD*FHNHVQGLIEPMNLPKDIPDLERQVNLQGVPEIAVISG 66452

                   
Query: 324   CPFATS 307
              PFAT+
Sbjct: 66453 GPFATA 66470

 Score =  111 bits (237), Expect(5) = 4e-058
 Identities = 48/60 (80%), Positives = 54/60 (90%)
 Frame = +3 / -2

                                                                         
Query: 309   KLRKDSLKSQRLQALPAGLLAFQDLVYPLEDSWVESGLGHDYGISHVDIEKAATLHYNGV 488
             +LRK+SLKSQR QAL A LLAFQ LVYPLEDSWV+SGLGHD GIS+V+IEKAATL +NGV
Sbjct: 51917 QLRKNSLKSQRTQALVASLLAFQVLVYPLEDSWVQSGLGHDCGISYVNIEKAATLQHNGV 51738

 Score =  107 bits (229), Expect(3) = 2e-043
 Identities = 41/59 (69%), Positives = 46/59 (77%)
 Frame = +2 / -1

                                                                        
Query: 311   VAKGQPEISATASTPCRSTCLSRPGISFGRFMG*VRPWT*LWNQPCRYREGCYSALQWC 487
             V K QPEI+A  ST C+ TCLS   ISFGRFMG +RPWT*LWNQ C+YR+GCYSA  WC
Sbjct: 51915 VEKEQPEITANTSTGCKFTCLSSSSISFGRFMGSIRPWT*LWNQLCQYRKGCYSAA*WC 51739

 Score =  100 bits (213), Expect(3) = 2e-044
 Identities = 43/60 (71%), Positives = 48/60 (80%)
 Frame = -1 / +2

                                                                         
Query: 486   HHCSAE*QPSLYRHG*FHNHVQGLTQPMNLPKDIPGLERQVDLQGVLAVAEISGCPFATS 307
             HH +AE*QP LY H *FHNHVQGL +PMNLPKDI  LERQV+LQ VL  A ISGC F+T+
Sbjct: 51740 HHYAAE*QPFLY*HN*FHNHVQGLIEPMNLPKDILELERQVNLQPVLVFAVISGCSFSTA 51919

 Score =  100 bits (213), Expect(3) = 5e-053
 Identities = 47/60 (78%), Positives = 52/60 (86%)
 Frame = -2 / +3

                                                                         
Query: 488   HTIVVQSSSLLYIDMADSIIMSKA*LNP*IFQRIYQVLKGK*TCRECLQSLRFQAVLSQL 309
             +TI++QSSSL YID+ DS IMSKA*LNP*IFQRIY  LKGK*TC +CL SL FQAVLSQL
Sbjct: 51738 YTIMLQSSSLFYIDITDSTIMSKA*LNP*IFQRIY*NLKGK*TCNQCLCSL*FQAVLSQL 51917

 Score = 99.6 bits (211), Expect(3) = 2e-033
 Identities = 44/57 (77%), Positives = 49/57 (85%)
 Frame = +1 / -3

                                                                      
Query: 316   ERTA*NLSDCKHSLQVYLPFKTWYILWKIHGLSQALDMIMESAMSI*RRLLLCTTMV 486
             ERTA*N S+ KH LQVYLPFK  YILWKIHG +QALDMI+ES MSI*+RLLLC+ MV
Sbjct: 51910 ERTA*NHSEHKHWLQVYLPFKF*YILWKIHGFNQALDMIVESVMSI*KRLLLCSIMV 51740

 Score = 99.6 bits (211), Expect(3) = 3e-037
 Identities = 46/59 (77%), Positives = 48/59 (81%)
 Frame = -3 / +1

                                                                        
Query: 487   TPL*CRVAAFSISTWLIP*SCPRPDSTHESSKGYTRS*KASRPAGSACSR*DFRLSFRN 311
             TPL CRVAAFSI T LIP SCPRPD THESSKGYTR+*KAS+ A SAC R DFRL F N
Sbjct: 51739 TPLCCRVAAFSILT*LIPQSCPRPD*THESSKGYTRT*KASKLATSACVRCDFRLFFLN 51915

 Score = 87.2 bits (184), Expect(5) = 4e-058
 Identities = 35/44 (79%), Positives = 40/44 (90%)
 Frame = +3 / -3

                                                         
Query: 183   KPYIADHNVDDDSCVWLSGLNVIELDKWRDTGITSLHDQSVQKL 314
             K  IADHNV+ +SCVWLSGLNVIELDKWRDTGITSL+D S+QK+
Sbjct: 52204 KKTIADHNVNANSCVWLSGLNVIELDKWRDTGITSLYD*SLQKV 52073

 Score = 86.3 bits (182), Expect(3) = 5e-053
 Identities = 34/40 (85%), Positives = 37/40 (92%)
 Frame = -3 / +3

                                                     
Query: 310   FWTD*SCKLVMPVSLHLSNSMTFRPDNHTHESSSTLWSAI 191
             FW+D*S KLVMPVSLHLSNSMTFRPDNHTHE + TLWSA+
Sbjct: 52077 FWSD*SYKLVMPVSLHLSNSMTFRPDNHTHELALTLWSAM 52196

 Score = 78.0 bits (164), Expect(3) = 5e-053
 Identities = 32/44 (72%), Positives = 38/44 (86%)
 Frame = -3 / +2

                                                         
Query: 160   QNWTAPITLPPISRFHRGDKSFWTIKSSSRTTTLFKLGRRSGKR 29
             QNWTAPITL PISRF++ +KSF TIKSSSRTTTLFK+GR   ++
Sbjct: 52259 QNWTAPITLLPISRFNKDNKSFCTIKSSSRTTTLFKVGRSGKRK 52390

 Score = 78.0 bits (164), Expect(3) = 2e-044
 Identities = 32/42 (76%), Positives = 37/42 (88%)
 Frame = -2 / +2

                                                       
Query: 317   SQLLD*LIMQTGNASVPPFIQFNDIQARQPHT*IIIDVMVCY 192
             + LL+ LI+QT +A VPPFIQFNDIQARQPHT*I ID+MVCY
Sbjct: 52070 TDLLERLIIQTRDAGVPPFIQFNDIQARQPHT*ISIDIMVCY 52195

 Score = 74.8 bits (157), Expect(3) = 2e-043
 Identities = 31/39 (79%), Positives = 34/39 (87%)
 Frame = +1 / -1

                                                    
Query: 193   *QTITSMMIHVCGCRA*MSLNWINGGTLALPVCMINQSR 309
             *QTI SM+IHVCGC A*MSLNWINGGT A  VCMIN+S+
Sbjct: 52194 *QTIMSMLIHVCGCLA*MSLNWINGGTPASRVCMINRSK 52078

 Score = 74.8 bits (157), Expect(5) = 4e-058
 Identities = 33/38 (86%), Positives = 34/38 (89%)
 Frame = +3 / -1

                                                   
Query: 45    LPSLNRVVVLDDDLIVQKDLSPLWNLDMGGKVIGAVQF 158
             LP+LNRVVVLDDDLIVQKDL  L NLDMG KVIGAVQF
Sbjct: 52374 LPTLNRVVVLDDDLIVQKDLLSLLNLDMGSKVIGAVQF 52261

 Score = 73.5 bits (154), Expect(3) = 3e-037
 Identities = 29/39 (74%), Positives = 32/39 (82%)
 Frame = -1 / +1

                                                    
Query: 306   GLIDHANW*CQCPSIYPIQ*HSGPTTTHMNHHRRYGLLY 190
             G I+H N *C+CPSIYPIQ*HSG TTTHMN H  YGLL+
Sbjct: 52081 GAINHTNS*CRCPSIYPIQ*HSGQTTTHMN*H*HYGLLW 52197

 Score = 65.7 bits (137), Expect(3) = 2e-033
 Identities = 29/46 (63%), Positives = 35/46 (76%)
 Frame = +2 / -2

                                                           
Query: 191   YSRP*RR**FMCVVVGPECH*IG*MEGHWHYQFA*SISPEVAKGQP 328
             +SRP* + *FMCVVV PECH*IG*MEGH H++F * I+P+     P
Sbjct: 52196 HSRP*CQC*FMCVVVWPECH*IG*MEGHRHHEFV*LIAPKGQLNSP 52059

 Score = 57.4 bits (119), Expect(3) = 2e-044
 Identities = 24/38 (63%), Positives = 30/38 (78%)
 Frame = -1 / +3

                                                   
Query: 159   RTGLLQSLYHPYRGSIEVTSPSGQSNHHPEQLLYSS*E 46
             RTG  +SLY+PY+GS ++T+ S QSNH PEQLL S *E
Sbjct: 52260 RTGQHRSLYYPYQGSTKITNLSAQSNHRPEQLLCSR*E 52373

 Score = 50.1 bits (103), Expect(3) = 2e-043
 Identities = 26/40 (65%), Positives = 28/40 (70%)
 Frame = +1 / -2

                                                     
Query: 46    FLA*IE*LFWMMI*LSRRTCHLYGTSIWVVK*LEQSSSVE 165
             FL * E*LFW MI*L R+ C+L  T IWVVK*   SSS E
Sbjct: 52373 FLP*TE*LFWTMI*LCRKICYLC*TLIWVVK*SVLSSSGE 52254

 Score = 38.6 bits (78), Expect(3) = 3e-037
 Identities = 21/52 (40%), Positives = 27/52 (51%)
 Frame = -2 / +1

                                                                 
Query: 185   FQLP*SHSTELDCSNHFTTHIEVP*R*QVLLDXXXXXXXXXXXQARKKVRQE 30
             F  P   S ELD ++HFTTHI+V  R*Q+ L            Q RK  ++E
Sbjct: 52234 FNCPNLTSPELDSTDHFTTHIKVQQR*QIFLHNQIIVQNNYSVQGRKVRQEE 52389

 Score = 33.1 bits (66), Expect(3) = 2e-033
 Identities = 17/29 (58%), Positives = 18/29 (62%)
 Frame = +2 / -3

                                          
Query: 74    G**FDCPEGLVTSMEPRYGW*SDWSSPVL 160
             G *FDC E  V  +EP YG *SD   PVL
Sbjct: 52345 GR*FDCAERFVIFVEP*YG**SDRCCPVL 52259

 Score = 29.5 bits (58), Expect(5) = 4e-058
 Identities = 10/14 (71%), Positives = 12/14 (85%)
 Frame = +2 / -3

                           
Query: 2     HIYLRPFTFPLA*P 43
             H+Y +PF FPLA*P
Sbjct: 52414 HMYFQPFKFPLA*P 52373

 Score = 29.0 bits (57), Expect(5) = 4e-058
 Identities = 9/10 (90%), Positives = 10/10 (100%)
 Frame = +3 / -2

                       
Query: 495   PWLDLGILDY 524
             PWLDLG+LDY
Sbjct: 51737 PWLDLGLLDY 51708
>gb|BI212063.1|BI212063 IP1_61_B03.g1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
           mRNA sequence
          Length = 648

 Score =  184 bits (397), Expect = 7e-046
 Identities = 70/146 (47%), Positives = 100/146 (68%)
 Frame = +3 / +1

                                                                       
Query: 111 LWNLDMGGKVIGAVQFCGVRLGQLKPYIADHNVDDDSCVWLSGLNVIELDKWRDTGITSL 290
           LWN+DMG KV GAV+ CG++LG++K  +     D + C W+SG+N+I LDKWR+  +T  
Sbjct: 4   LWNIDMGDKVNGAVELCGLKLGEMKNVLGKTAYDPNLCAWMSGVNLINLDKWREHNVTEN 183

                                                                       
Query: 291 HDQSVQKLRKDSLKSQRLQALPAGLLAFQDLVYPLEDSWVESGLGHDYGISHVDIEKAAT 470
           +   ++K +     S R  A P  LL+FQ L+YPL++    +GLG+DYGI  V   ++A+
Sbjct: 184 YLLLMKKFKFKDELSLRAAAFPLSLLSFQHLIYPLDEKLTLAGLGYDYGIDEVVARRSAS 363

                                     
Query: 471 LHYNGVMKPWLDLGILDYKNYWRKYL 548
           LHYNG MKPWL+LGI DYK YW+++L
Sbjct: 364 LHYNGNMKPWLELGIPDYKKYWKRFL 441
>gb|CN140420.1|CN140420 OX1_36_B10.b1_A002 Oxidatively-stressed leaves and roots Sorghum
           bicolor cDNA clone OX1_36_B10_A002 3', mRNA sequence
          Length = 836

 Score = 84.0 bits (177), Expect(3) = 3e-034
 Identities = 32/69 (46%), Positives = 44/69 (63%)
 Frame = +3 / +3

                                                                       
Query: 339 RLQALPAGLLAFQDLVYPLEDSWVESGLGHDYGISHVDIEKAATLHYNGVMKPWLDLGIL 518
           +L  LP GL+ F     PLE SW   GLG++  IS  +I  AA +H+NG MKPWLD+G+ 
Sbjct: 399 KLGTLPPGLITFYSTTKPLEKSWHVLGLGYNPSISMEEIRNAAVVHFNGNMKPWLDIGMN 578

                    
Query: 519 DYKNYWRKY 545
            +++ W KY
Sbjct: 579 QFRHLWTKY 605

 Score = 71.2 bits (149), Expect(3) = 3e-034
 Identities = 26/53 (49%), Positives = 39/53 (73%)
 Frame = +3 / +3

                                                                
Query: 3   ISIFGLSHFLLPDLLPSLNRVVVLDDDLIVQKDLSPLWNLDMGGKVIGAVQFC 161
           +S+     F LP++ P L+R++ LDDD++VQ+DL+ LW +DM GKV GAV+ C
Sbjct: 51  LSMLNHLRFYLPEMYPKLHRILFLDDDVVVQRDLTGLWKIDMDGKVNGAVETC 209

 Score = 29.0 bits (57), Expect(3) = 3e-034
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +3 / +3

                             
Query: 216 DSCVWLSGLNVIELDKWR 269
           ++C W  G+N  +LD WR
Sbjct: 282 NACGWAYGMNFFDLDSWR 335
>gb|CD210962.1|CD210962 HS1_58_B05.b1_A012 Heat-shocked seedlings Sorghum bicolor cDNA
           clone HS1_58_B05_A012 3', mRNA sequence
          Length = 733

 Score =  143 bits (306), Expect = 3e-033
 Identities = 54/113 (47%), Positives = 77/113 (68%)
 Frame = +3 / +1

                                                                       
Query: 210 DDDSCVWLSGLNVIELDKWRDTGITSLHDQSVQKLRKDSLKSQRLQALPAGLLAFQDLVY 389
           D + C W+SG+N+I LDKWR+  +T  +   ++K +     S R  A P  LL+FQ L+Y
Sbjct: 4   DPNLCAWMSGVNLINLDKWREHNVTENYLLLMKKFKFKDELSLRAAAFPLSLLSFQHLIY 183

                                                                
Query: 390 PLEDSWVESGLGHDYGISHVDIEKAATLHYNGVMKPWLDLGILDYKNYWRKYL 548
           PL++    +GLG+DYGI  V   ++A+LHYNG MKPWL+LGI DYK YW+++L
Sbjct: 184 PLDEKLTLAGLGYDYGIDEVVARRSASLHYNGNMKPWLELGIPDYKKYWKRFL 342
>gb|CW037385.1|CW037385 104_269_10504310_115_30384 Sorghum methylation filtered library
           (LibID: 104) Sorghum bicolor genomic clone 10504310, DNA
           sequence
          Length = 689

 Score =  135 bits (289), Expect = 6e-031
 Identities = 49/94 (52%), Positives = 72/94 (76%)
 Frame = +3 / +2

                                                                       
Query: 3   ISIFGLSHFLLPDLLPSLNRVVVLDDDLIVQKDLSPLWNLDMGGKVIGAVQFCGVRLGQL 182
           +S+F  SHF++P++   LN+VVVLDDD++VQ+DLS LWN+DMG KV GAV+ CG++LG++
Sbjct: 71  LSLFSHSHFVIPEIFKYLNKVVVLDDDVVVQRDLSFLWNIDMGDKVNGAVELCGLKLGEM 250

                                             
Query: 183 KPYIADHNVDDDSCVWLSGLNVIELDKWRDTGIT 284
           K  +     D + C W+SG+N+I LDKWR+  +T
Sbjct: 251 KNVLGKTAYDPNLCAWMSGVNLINLDKWREHNVT 352
>gb|CN149194.1|CN149194 WOUND1_61_F10.b1_A002 Wounded leaves Sorghum bicolor cDNA clone
           WOUND1_61_F10_A002 3', mRNA sequence
          Length = 807

 Score = 84.0 bits (177), Expect(3) = 6e-030
 Identities = 32/70 (45%), Positives = 45/70 (64%)
 Frame = +3 / +2

                                                                       
Query: 339 RLQALPAGLLAFQDLVYPLEDSWVESGLGHDYGISHVDIEKAATLHYNGVMKPWLDLGIL 518
           +L  LP GL+ F     PLE SW   GLG++  IS  +I  AA +H+NG MKPWLD+G+ 
Sbjct: 296 KLGTLPPGLITFYSTTKPLERSWHVLGLGYNPSISMEEIRNAAVVHFNGNMKPWLDIGMN 475

                     
Query: 519 DYKNYWRKYL 548
            +++ W KY+
Sbjct: 476 QFRHLWTKYV 505

 Score = 56.5 bits (117), Expect(3) = 6e-030
 Identities = 20/35 (57%), Positives = 29/35 (82%)
 Frame = +3 / +2

                                              
Query: 57  NRVVVLDDDLIVQKDLSPLWNLDMGGKVIGAVQFC 161
           +R++ LDDD++VQ+DL+ LW +DM GKV GAV+ C
Sbjct: 2   HRILFLDDDVVVQRDLTGLWKIDMDGKVNGAVETC 106

 Score = 29.0 bits (57), Expect(3) = 6e-030
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +3 / +2

                             
Query: 216 DSCVWLSGLNVIELDKWR 269
           ++C W  G+N  +LD WR
Sbjct: 179 NACGWAYGMNFFDLDSWR 232
>gb|BI139893.1|BI139893 IP1_47_A12.b1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
           mRNA sequence
          Length = 598

 Score = 96.8 bits (205), Expect(2) = 7e-030
 Identities = 37/115 (32%), Positives = 62/115 (53%)
 Frame = +3 / +2

                                                                       
Query: 204 NVDDDSCVWLSGLNVIELDKWRDTGITSLHDQSVQKLRKDSLKSQRLQALPAGLLAFQDL 383
           ++D D C W  G+N+ +L  WR T I   +   +++  K  L   +   LP  L+AF+  
Sbjct: 179 SLDPDECAWAYGMNIFDLAAWRKTNIRDTYHFWLKENLKSGLTLWKFGTLPPALIAFRGH 358

                                                                  
Query: 384 VYPLEDSWVESGLGHDYGISHVDIEKAATLHYNGVMKPWLDLGILDYKNYWRKYL 548
           V+ ++ SW   GLG+        + +AA +HYNG  KPWLD+   + + +W K++
Sbjct: 359 VHGIDPSWHLLGLGYQDKTDIESVRRAAVIHYNGQCKPWLDIAFKNLQPFWTKHV 523

 Score = 54.7 bits (113), Expect(2) = 7e-030
 Identities = 20/32 (62%), Positives = 27/32 (84%)
 Frame = +3 / +2

                                           
Query: 66  VVLDDDLIVQKDLSPLWNLDMGGKVIGAVQFC 161
           V LDDD++VQ+DLSPLW +++ GKV GAV+ C
Sbjct: 8   VFLDDDIVVQRDLSPLWAINLEGKVNGAVETC 103
>gb|CW306008.1|CW306008 104_791_11466607_148_36273_024 Sorghum methylation filtered library
           (LibID: 104) Sorghum bicolor genomic clone 11466607, DNA
           sequence
          Length = 675

 Score = 78.0 bits (164), Expect(3) = 8e-026
 Identities = 31/66 (46%), Positives = 40/66 (60%)
 Frame = +3 / -1

                                                                       
Query: 351 LPAGLLAFQDLVYPLEDSWVESGLGHDYGISHVDIEKAATLHYNGVMKPWLDLGILDYKN 530
           LP GL+ F     PL+ SW   GLG++  I   DI  AA +H+NG MKPWLD+    YK+
Sbjct: 252 LPVGLMTFYGKTKPLDKSWHVMGLGYNPHIRPEDIGGAAVIHFNGNMKPWLDVAFNQYKH 73

                 
Query: 531 YWRKYL 548
            W KY+
Sbjct: 72  LWTKYV 55

 Score = 51.5 bits (106), Expect(3) = 8e-026
 Identities = 19/36 (52%), Positives = 27/36 (75%)
 Frame = +3 / -3

                                               
Query: 54  LNRVVVLDDDLIVQKDLSPLWNLDMGGKVIGAVQFC 161
           L RVV+L+DD++VQ+DL+ LW +DMG  V  A+  C
Sbjct: 673 LRRVVLLEDDVVVQRDLAGLWRVDMGANVNAALHTC 566

 Score = 27.6 bits (54), Expect(3) = 8e-026
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +3 / -3

                            
Query: 219 SCVWLSGLNVIELDKWR 269
           +C W  G+NV +L  WR
Sbjct: 490 ACAWSYGVNVFDLQGWR 440
>gb|BZ628082.1|BZ628082 ih57h02.g1 WGS-SbicolorF (DH5a methyl filtered) Sorghum bicolor
           genomic clone ih57h02 5', DNA sequence
          Length = 469

 Score =  107 bits (228), Expect = 2e-022
 Identities = 40/72 (55%), Positives = 53/72 (73%)
 Frame = +3 / -3

                                                                       
Query: 333 SQRLQALPAGLLAFQDLVYPLEDSWVESGLGHDYGISHVDIEKAATLHYNGVMKPWLDLG 512
           S R  A P  LL+FQ L+YPL++    +GLG+DYGI  V   ++A+LHYNG MKPWL+LG
Sbjct: 392 SLRAAAFPLSLLSFQHLIYPLDEKLTLAGLGYDYGIDEVVARRSASLHYNGNMKPWLELG 213

                       
Query: 513 ILDYKNYWRKYL 548
           I DYK YW+++L
Sbjct: 212 IPDYKKYWKRFL 177
>gb|CF487333.1|CF487333 POL1_43_D11.b1_A002 Pollen Sorghum bicolor cDNA clone
           POL1_43_D11_A002 3', mRNA sequence
          Length = 661

 Score = 90.9 bits (192), Expect(2) = 2e-022
 Identities = 34/70 (48%), Positives = 46/70 (65%)
 Frame = +3 / +2

                                                                       
Query: 339 RLQALPAGLLAFQDLVYPLEDSWVESGLGHDYGISHVDIEKAATLHYNGVMKPWLDLGIL 518
           +L  LP GLL F  L +PL+ SW   GLG++  I   +I+ AA +HYNG MKPWL+L + 
Sbjct: 158 KLGTLPPGLLTFYKLTHPLDKSWHVLGLGYNPSIDRSEIDSAAVVHYNGNMKPWLELAMT 337

                     
Query: 519 DYKNYWRKYL 548
            Y+ YW KY+
Sbjct: 338 KYRPYWTKYI 367

 Score = 35.4 bits (71), Expect(2) = 2e-022
 Identities = 10/30 (33%), Positives = 19/30 (63%)
 Frame = +3 / +2

                                         
Query: 204 NVDDDSCVWLSGLNVIELDKWRDTGITSLH 293
           N D ++C W  G+N+ +L +W+   IT ++
Sbjct: 29  NFDPNACGWAYGMNIFDLREWKKKDITGIY 118
>gb|CF485968.1|CF485968 POL1_34_H03.g1_A002 Pollen Sorghum bicolor cDNA clone
           POL1_34_H03_A002 5', mRNA sequence
          Length = 620

 Score =  106 bits (226), Expect = 3e-022
 Identities = 41/76 (53%), Positives = 54/76 (71%)
 Frame = +3 / +1

                                                                       
Query: 321 DSLKSQRLQALPAGLLAFQDLVYPLEDSWVESGLGHDYGISHVDIEKAATLHYNGVMKPW 500
           D   S R  ALP  LL+FQ L+YPL++    SGLG+DYGI     + +A+LHYNG MKPW
Sbjct: 46  DDEASLRASALPISLLSFQHLLYPLDERLTLSGLGYDYGIKEEVAQSSASLHYNGNMKPW 225

                           
Query: 501 LDLGILDYKNYWRKYL 548
           L+LGI DY+ YW+++L
Sbjct: 226 LELGIPDYRKYWKRFL 273
>gb|CW144377.1|CW144377 104_536_11137911_148_34962_056 Sorghum methylation filtered library
           (LibID: 104) Sorghum bicolor genomic clone 11137911, DNA
           sequence
          Length = 622

 Score = 90.9 bits (192), Expect(2) = 5e-022
 Identities = 34/70 (48%), Positives = 46/70 (65%)
 Frame = +3 / +2

                                                                       
Query: 339 RLQALPAGLLAFQDLVYPLEDSWVESGLGHDYGISHVDIEKAATLHYNGVMKPWLDLGIL 518
           +L  LP GLL F  L +PL+ SW   GLG++  I   +I+ AA +HYNG MKPWL+L + 
Sbjct: 299 KLGTLPPGLLTFYKLTHPLDKSWHVLGLGYNPSIDRSEIDSAAVVHYNGNMKPWLELAMT 478

                     
Query: 519 DYKNYWRKYL 548
            Y+ YW KY+
Sbjct: 479 KYRPYWTKYI 508

 Score = 35.4 bits (71), Expect(2) = 5e-022
 Identities = 10/30 (33%), Positives = 19/30 (63%)
 Frame = +3 / +2

                                         
Query: 204 NVDDDSCVWLSGLNVIELDKWRDTGITSLH 293
           N D ++C W  G+N+ +L +W+   IT ++
Sbjct: 35  NFDPNACGWAYGMNIFDLREWKKKDITGIY 124
  Database: Sorghum_nucl_with_EST.fasta
    Posted date:  Feb 7, 2006  2:54 PM
  Number of letters in database: 491,359,669
  Number of sequences in database:  832,831
  
Lambda     K      H
   0.318    0.134    0.401 


Matrix: BLOSUM62
Number of Hits to DB: 714,580,064
Number of Sequences: 832831
Number of extensions: 10382893
Number of successful extensions: 87792
Number of sequences better than 1.0e-020: 18
length of database: 163,786,556
effective HSP length: 53
effective length of database: 119,646,513
effective search space used: 15912986229
frameshift window, decay const: 40,  0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)