TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= QAE20c02.yg.2.1
(696 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BG050964.1|BG050964 FM1_54_E04.b1_A003 Floral-Induced Me... 275 3e-073
gb|CW299015.1|CW299015 104_781_11462882_148_35655_001 Sorgh... 162 3e-068
gb|BF587276.1|BF587276 FM1_34_D09.b1_A003 Floral-Induced Me... 248 7e-065
gb|CW299014.1|CW299014 104_781_11462882_116_35659_001 Sorgh... 162 9e-058
gb|BE125777.1|BE125777 DG1_57_B08.b1_A002 Dark Grown 1 (DG1... 202 1e-057
gb|CF487437.1|CF487437 POL1_43_F12.g1_A002 Pollen Sorghum b... 175 2e-057
gb|BI075368.1|BI075368 IP1_19_F12.b1_A002 Immature pannicle... 156 2e-047
gb|BM324257.1|BM324257 PIC1_26_B11.b1_A002 Pathogen-infecte... 181 1e-044
gb|CW398117.1|CW398117 fsbb001f087g20k0 Sorghum methylation... 73 8e-042
gb|BG412794.1|BG412794 OV2_34_H07.b1_A002 Ovary 2 (OV2) Sor... 170 3e-041
gb|BG412795.1|BG412795 OV2_34_H08.b1_A002 Ovary 2 (OV2) Sor... 170 3e-041
gb|CW493896.1|CW493896 fsbb001f284o06k0 Sorghum methylation... 79 3e-041
gb|CL165780.1|CL165780 104_361_10808896_114_31820_112 Sorgh... 126 4e-041
gb|BG556907.1|BG556907 EM1_40_B08.b1_A002 Embryo 1 (EM1) So... 163 3e-040
gb|CL167736.1|CL167736 104_364_10810290_116_31803_354 Sorgh... 110 3e-040
gb|AW671741.1|AW671741 LG1_351_F12.b1_A002 Light Grown 1 (L... 144 7e-040
gb|BE361500.1|BE361500 DG1_81_B12.b1_A002 Dark Grown 1 (DG1... 155 1e-039
gb|CN143487.1|CN143487 WOUND1_16_C08.g1_A002 Wounded leaves... 148 2e-039
gb|CW339175.1|CW339175 104_839_11485133_148_36135_019 Sorgh... 94 2e-038
gb|CW267997.1|CW267997 104_738_11401044_148_35300_040 Sorgh... 78 7e-038
gb|CW135560.1|CW135560 104_520_11117914_148_34833_043 Sorgh... 102 8e-038
gb|CW117040.1|CW117040 104_493_11107445_148_34610_031 Sorgh... 74 2e-037
gb|BE595092.1|BE595092 PI1_45_E09.b1_A002 Pathogen induced ... 155 5e-037
gb|BZ367054.1|BZ367054 id02b04.g1 WGS-SbicolorF (JM107 adap... 126 7e-037
gb|BE595073.1|BE595073 PI1_45_C11.b1_A002 Pathogen induced ... 154 2e-036
gb|CL177641.1|CL177641 104_385_10893973_116_31914_037 Sorgh... 105 2e-036
gb|CW053211.1|CW053211 104_293_10515837_114_30184 Sorghum m... 110 3e-034
gb|CW249974.1|CW249974 104_712_11223133_148_35054_063 Sorgh... 74 3e-034
gb|CL156685.1|CL156685 104_343_10783033_114_31475_361 Sorgh... 101 1e-033
gb|CW053338.1|CW053338 104_293_10515908_114_30185 Sorghum m... 110 7e-033
gb|CN124070.1|CN124070 RHOH1_2_A09.g1_A002 Acid- and alkali... 134 1e-030
gb|AW923117.1|AW923117 DG1_49_C11.b1_A002 Dark Grown 1 (DG1... 134 1e-030
gb|CW360617.1|CW360617 fsbb001f028m16k0 Sorghum methylation... 97 9e-030
gb|CW339174.1|CW339174 104_839_11485133_116_36134_019 Sorgh... 68 2e-029
gb|CL156686.1|CL156686 104_343_10783033_116_31476_361 Sorgh... 101 1e-028
gb|CW123120.1|CW123120 104_502_11111040_148_34686_092 Sorgh... 74 4e-028
gb|BM323664.1|BM323664 PIC1_21_H06.b1_A002 Pathogen-infecte... 109 5e-028
gb|CW197002.1|CW197002 104_621_11181460_116_36820_012 Sorgh... 80 7e-028
gb|BM323743.1|BM323743 PIC1_22_G06.b1_A002 Pathogen-infecte... 111 3e-027
gb|CW148187.1|CW148187 104_542_11140281_116_35000_035 Sorgh... 115 5e-027
gb|CW400817.1|CW400817 fsbb001f091f04f0 Sorghum methylation... 77 6e-027
gb|AF253508.1|AF253508 Sorghum bicolor cyanogenic beta-gluc... 95 1e-026
gb|CN143668.1|CN143668 WOUND1_17_D11.g1_A002 Wounded leaves... 95 1e-026
gb|CW188764.1|CW188764 104_608_11173219_116_36729_068 Sorgh... 120 2e-026
gb|CW439638.1|CW439638 fsbb001f157o06f0 Sorghum methylation... 59 3e-026
gb|CL167735.1|CL167735 104_364_10810290_114_31802_354 Sorgh... 102 3e-026
gb|CW164218.1|CW164218 104_572_11151871_116_36465_030 Sorgh... 119 5e-026
gb|CW128995.1|CW128995 104_510_11114318_148_34753_049 Sorgh... 79 6e-026
gb|BI076057.1|BI076057 IP1_24_G09.b1_A002 Immature pannicle... 89 6e-026
gb|CW437081.1|CW437081 fsbb001f154a08k0 Sorghum methylation... 79 7e-026
gb|CW437334.1|CW437334 fsbb001f154g12k0 Sorghum methylation... 79 7e-026
gb|CW159823.1|CW159823 104_566_11149558_148_36423_093 Sorgh... 59 2e-025
gb|CN136543.1|CN136543 OX1_43_G11.g1_A002 Oxidatively-stres... 90 3e-025
gb|CN148176.1|CN148176 WOUND1_54_D09.g1_A002 Wounded leaves... 95 4e-025
gb|CW224101.1|CW224101 104_660_11203270_116_37444_091 Sorgh... 84 5e-025
gb|BF177065.1|BF177065 EM1_3_B09.g1_A002 Embryo 1 (EM1) Sor... 114 1e-024
gb|CD229624.1|CD229624 CCC1_17_E12.g1_A007 Callus culture/c... 87 2e-024
gb|CW038249.1|CW038249 104_270_10504817_114_30385 Sorghum m... 57 5e-024
gb|CW032997.1|CW032997 104_262_10501708_114_30361 Sorghum m... 89 2e-023
gb|CW426317.1|CW426317 fsbb001f137k07k0 Sorghum methylation... 110 2e-023
gb|CW398116.1|CW398116 fsbb001f087g20f0 Sorghum methylation... 51 6e-023
gb|CD208589.1|CD208589 HS1_38_B10.g1_A012 Heat-shocked seed... 95 6e-023
gb|CW360616.1|CW360616 fsbb001f028m16f0 Sorghum methylation... 74 6e-023
gb|CN145790.1|CN145790 WOUND1_35_F12.b1_A002 Wounded leaves... 95 8e-023
gb|BE600202.1|BE600202 PI1_80_E11.b1_A002 Pathogen induced ... 95 8e-023
gb|CD428941.1|CD428941 ETH1_1_F07.g1_A002 Ethylene-treated ... 95 8e-023
gb|U33817.1|SBU33817 Sorghum bicolor dhurrinase mRNA, nucle... 96 1e-022
gb|CW323932.1|CW323932 104_818_11476891_148_35908_076 Sorgh... 83 1e-022
gb|CW389480.1|CW389480 fsbb001f074l04k0 Sorghum methylation... 69 1e-022
gb|CN148726.1|CN148726 WOUND1_58_A03.g1_A002 Wounded leaves... 94 1e-022
gb|CW484046.1|CW484046 fsbb001f245p15k0 Sorghum methylation... 80 1e-022
gb|CW264362.1|CW264362 104_733_11231248_148_35250_062 Sorgh... 80 1e-022
gb|BE125076.1|BE125076 DG1_15_B11.b1_A002 Dark Grown 1 (DG1... 106 3e-022
gb|BE357382.1|BE357382 DG1_15_B11.b2_A002 Dark Grown 1 (DG1... 106 3e-022
gb|CW114453.1|CW114453 104_489_11106000_148_34568_094 Sorgh... 75 4e-022
gb|CN148142.1|CN148142 WOUND1_54_A06.g1_A002 Wounded leaves... 78 7e-022
gb|CW402418.1|CW402418 fsbb001f093k23k0 Sorghum methylation... 72 2e-021
gb|CD232926.1|CD232926 SS1_10_A10.g1_A012 Salt-stressed see... 90 2e-021
gb|CW179291.1|CW179291 104_593_11160023_148_36627_090 Sorgh... 72 2e-021
gb|BZ367944.1|BZ367944 id07e02.b1 WGS-SbicolorF (JM107 adap... 83 2e-021
gb|CW183756.1|CW183756 104_599_11164783_148_36676_020 Sorgh... 71 3e-021
gb|CW313480.1|CW313480 104_803_11471307_148_35790_004 Sorgh... 72 5e-021
gb|CW285108.1|CW285108 104_762_11410158_116_35504_027 Sorgh... 72 5e-021
gb|CW100471.1|CW100471 104_467_11004117_116_34388_081 Sorgh... 72 5e-021
gb|CL181574.1|CL181574 104_392_10896842_148_31925_218 Sorgh... 63 6e-021
gb|CW426316.1|CW426316 fsbb001f137k07f0 Sorghum methylation... 102 7e-021
gb|CF761407.1|CF761407 DSAF1_74_G02.b1_A011 Drought-stresse... 101 9e-021
>gb|BG050964.1|BG050964 FM1_54_E04.b1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 447
Score = 275 bits (596), Expect = 3e-073
Identities = 110/148 (74%), Positives = 123/148 (83%)
Frame = -3 / +3
Query: 541 NSSTEPYIVVHNILLSHATAVARYRNKYQATQKGKVGIVLDFNWYEPFTNSTEDQKAAQR 362
NS+TEPYIV HN LL+HA AVARYR KYQA QKGKVGIVLDFNWYE TNS +DQ AAQR
Sbjct: 3 NSATEPYIVAHNFLLAHAAAVARYRTKYQAAQKGKVGIVLDFNWYEALTNSPDDQAAAQR 182
Query: 361 ARDFHIGWFLDPLINGQYPKIMQDIVKDRLPSFTPEQAKLVKGSSDYFGINQYTTYYIAD 182
ARDFHIGWF+DPLING YP+IMQD+VK+RLP FTPEQAKLVKGS+DY GIN+YT+ Y+
Sbjct: 183 ARDFHIGWFVDPLINGHYPQIMQDLVKERLPRFTPEQAKLVKGSADYIGINEYTSSYMKG 362
Query: 181 QQTPPQGPPSYSSDWGVQYYFQRNGVQI 98
Q+ Q P SYS+DW VQY F RNG I
Sbjct: 363 QKLLQQTPSSYSADWQVQYVFARNGKPI 446
Score = 194 bits (419), Expect = 9e-049
Identities = 98/145 (67%), Positives = 104/145 (71%)
Frame = +3 / -3
Query: 108 PFL*K*YWTPQSDE*LGGPCGGVC*SAM*YVVY*LIPK*SDEPLTSLACSGVKLGSRSFT 287
P K YWT QS E*L G C M* VY LIP *S EPLT+LACSGV LGS SFT
Sbjct: 436 PLRAKTYWTCQSAE*LLGVCWSSFCPFM*LDVYSLIPM*SAEPLTNLACSGVNLGSLSFT 257
Query: 288 MSCIIFGYCPFINGSRNQPIWKSLALCAAF*SSVEFVKGSYQLKSRTIPTLPF*VAWYLL 467
SCII G CPFINGS NQP+WKSLAL AA SS EFV+ SYQLKSRTIPTLPF A Y +
Sbjct: 256 RSCIICG*CPFINGSTNQPMWKSLALWAAAWSSGEFVRASYQLKSRTIPTLPFWAA*YFV 77
Query: 468 RYLATAVA*DRRML*TTM*GSVDEF 542
RYLATA A +R L* T+*GSV EF
Sbjct: 76 RYLATAAACAKRKL*ATI*GSVAEF 2
Score = 149 bits (319), Expect = 6e-035
Identities = 66/129 (51%), Positives = 79/129 (61%)
Frame = +2 / -2
Query: 98 NLHAIPLKVILDAPVGRVARWSLRRSLLICNVVCSILIDPEIV**ALD*LGLFRCETW*P 277
N AI K ILD P+GRVA L L +V + ID +V ALD L R E *P
Sbjct: 446 NWFAIACKNILDLPIGRVATGRLLEQFLSLHVAGCVFIDTNVVCRALDQFSLLRSEPG*P 267
Query: 278 VFHNVLHYLWILPIY*WIKKPTNMEVPGPLRCFLIFS*VCKRFIPVEVKNYPDLAFLSCL 457
+FH +LHYLWI+ IY WI KP N+EVP L C L+ *VCK FIPVEV++ +L L L
Sbjct: 266 LFHKILHYLWIMSIYQWINKPANVEVPSSLGCCLVIR*VCKSFIPVEVQDNSNLTLLGSL 87
Query: 458 VFIAVSCNC 484
+F VSCNC
Sbjct: 86 IFCTVSCNC 60
Score = 137 bits (294), Expect = 2e-031
Identities = 72/148 (48%), Positives = 88/148 (59%)
Frame = -2 / +2
Query: 542 ELIDRTLHCCS*HSPISCYCSCKIPQ*IPGNSERQGRDSS*LQLV*TFYKLN*RSKSSAK 363
E +RTL+CCS* S +C CSCKIP I G E G + LQLV*+ YKL * SS K
Sbjct: 2 EFSNRTLYCCS*FSLGTCCCSCKIPYKISGCPEG*GWNCPGLQLV*SSYKLT**PGSSPK 181
Query: 362 GQGLPYWLVS*SINKWAISKDNARHCERPATKFHT*TGQASQGLIRLFRDQSIYYILHCR 183
GLP+WLV *SI+KW +S +NAR CER AT+ H+* QGL RL Q I+ LH
Sbjct: 182 S*GLPHWLVC*SIDKWTLSTNNARSCEREATQVHS*AS*IGQGLGRLHWYQ*IHIQLHEG 361
Query: 182 STNSSAGTTELLVRLGRPILLSKEWRAN 99
+ + A LL RL PI +W+ N
Sbjct: 362 TETAPADAQ*LLCRLAGPICFCTQWQTN 445
Score = 119 bits (255), Expect = 4e-026
Identities = 71/144 (49%), Positives = 83/144 (57%)
Frame = -1 / +1
Query: 528 NLTLLFITFSYLMLLQLQDTAINTRQLRKARSG*FLTSTGMNLLQTQLKIKKQRKGPGTS 349
NL LL I FS+ MLLQLQDT N R R+ R TSTGM LLQT L ++Q K GTS
Sbjct: 16 NLILLLIIFSWHMLLQLQDTVQNIRLPRRVRLELSWTSTGMKLLQTHLMTRQQPKELGTS 195
Query: 348 ILVGFLIH**MGNIQR*CKTL*KTGYQVSHLNRPS*SRAHQTISGSINILHTTLQINKLL 169
L G LIH**M I +*CK L*K GY S L++ + SRA QT S+N T +
Sbjct: 196 TLAGLLIH**MDIIHK*CKIL*KRGYPGSLLSKLNWSRARQTTLVSMNTHPAT*RDRNCS 375
Query: 168 RRDHRATRPTGASNITFKGMACKL 97
R AT P G SN+ MA +L
Sbjct: 376 SRRPVATLPIGRSNMFLHAMANQL 447
Score = 102 bits (218), Expect = 5e-021
Identities = 69/149 (46%), Positives = 82/149 (55%)
Frame = +1 / -1
Query: 97 QFARHSFESNIGRPSRTSSSVVPAEEFVDLQCSM*YID*SRNSLMSP*LAWPVQV*NLVA 276
Q H + +IG +R SS A CS I * + SL SP* Q * VA
Sbjct: 447 QLVCHCVQKHIGPANRQSSYWASAGAVSVPSCSWMCIH*YQCSLPSP*PI*LAQE*TWVA 268
Query: 277 GLSQCLALSLDIAHLLMDQETNQYGSPWPFALLFDLQLSL*KVHTS*SQELSRPCLSELP 456
LSQ LAL +D HL MDQ+T+Q GSP F LL Q+SL*++HTS*S +P S P
Sbjct: 267 SLSQDLALFVDNVHLSMDQQTSQCGSP*LFGLLPGHQVSL*ELHTS*SPGQFQPYPSGQP 88
Query: 457 GIYCGILQLQ*HEIGECYEQQCKVLSMSS 543
I GILQLQ H E YEQQ KV ++S
Sbjct: 87 DILYGILQLQQHVPRENYEQQYKVRLLNS 1
>gb|CW299015.1|CW299015 104_781_11462882_148_35655_001 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11462882, DNA
sequence
Length = 710
Score = 162 bits (349), Expect(4) = 3e-068
Identities = 65/71 (91%), Positives = 67/71 (94%)
Frame = -3 / +2
Query: 337 FLDPLINGQYPKIMQDIVKDRLPSFTPEQAKLVKGSSDYFGINQYTTYYIADQQTPPQGP 158
FLDPLINGQYPK MQDIVKDRLPSFTPEQAKLVKGSSDYFGINQYTT YI++QQT QGP
Sbjct: 227 FLDPLINGQYPKTMQDIVKDRLPSFTPEQAKLVKGSSDYFGINQYTTNYISNQQTTQQGP 406
Query: 157 PSYSSDWGVQY 125
PSYSSDWGVQY
Sbjct: 407 PSYSSDWGVQY 439
Score = 149 bits (320), Expect(4) = 1e-061
Identities = 64/71 (90%), Positives = 66/71 (92%)
Frame = +3 / -3
Query: 126 YWTPQSDE*LGGPCGGVC*SAM*YVVY*LIPK*SDEPLTSLACSGVKLGSRSFTMSCIIF 305
Y TPQSDE*LGGPC VC* M*+VVY*LIPK*SDEPLTSLACSGVKLGSRSFTMSCI+F
Sbjct: 438 Y*TPQSDE*LGGPC*VVC*FEM*FVVY*LIPK*SDEPLTSLACSGVKLGSRSFTMSCIVF 259
Query: 306 GYCPFINGSRN 338
GYCPFINGSRN
Sbjct: 258 GYCPFINGSRN 226
Score = 140 bits (300), Expect(3) = 2e-054
Identities = 62/75 (82%), Positives = 64/75 (85%)
Frame = +2 / -2
Query: 116 LKVILDAPVGRVARWSLRRSLLICNVVCSILIDPEIV**ALD*LGLFRCETW*PVFHNVL 295
L VIL+ PV RVA WSL SLLI NVVC ILIDPEIV**ALD*L LFRCETW*P+FHNVL
Sbjct: 448 LTVILNTPVRRVAWWSLLSSLLI*NVVCCILIDPEIV**ALD*LSLFRCETW*PIFHNVL 269
Query: 296 HYLWILPIY*WIKKP 340
H LWIL IY*WIKKP
Sbjct: 268 HCLWILSIY*WIKKP 224
Score = 129 bits (276), Expect(4) = 5e-050
Identities = 59/73 (80%), Positives = 62/73 (84%)
Frame = -1 / +3
Query: 339 GFLIH**MGNIQR*CKTL*KTGYQVSHLNRPS*SRAHQTISGSINILHTTLQINKLLRRD 160
GFLIH**M NIQR C+TL*K GYQVSHLNR S*SRAHQTISGSINI TT QINKLL +D
Sbjct: 225 GFLIH**MDNIQRQCRTL*KIGYQVSHLNRLS*SRAHQTISGSINIQQTTFQINKLLSKD 404
Query: 159 HRATRPTGASNIT 121
H+ATR TG NIT
Sbjct: 405 HQATRLTGVFNIT 443
Score = 122 bits (261), Expect(3) = 1e-044
Identities = 56/68 (82%), Positives = 58/68 (85%)
Frame = -2 / +1
Query: 338 VS*SINKWAISKDNARHCERPATKFHT*TGQASQGLIRLFRDQSIYYILHCRSTNSSAGT 159
VS*SINKW ISKDNA HCER ATKFHT*TG ASQGLIRLFRDQSIY LH +STN SA T
Sbjct: 226 VS*SINKWTISKDNAGHCERSATKFHT*TG*ASQGLIRLFRDQSIYNKLHFKSTNYSART 405
Query: 158 TELLVRLG 135
T+LLV LG
Sbjct: 406 TKLLV*LG 429
Score = 120 bits (256), Expect(3) = 3e-046
Identities = 59/73 (80%), Positives = 62/73 (84%)
Frame = +1 / -1
Query: 121 SNIGRPSRTSSSVVPAEEFVDLQCSM*YID*SRNSLMSP*LAWPVQV*NLVAGLSQCLAL 300
S I PS+TSS VV AE FVDL+CS+ YID*SRNSLMSP*LA PVQV*NLVA LSQC AL
Sbjct: 443 SYIEHPSQTSSLVVLAE*FVDLKCSLLYID*SRNSLMSP*LA*PVQV*NLVADLSQCPAL 264
Query: 301 SLDIAHLLMDQET 339
SLDI HLLMDQET
Sbjct: 263 SLDIVHLLMDQET 225
Score = 95.9 bits (203), Expect(4) = 3e-068
Identities = 37/39 (94%), Positives = 37/39 (94%)
Frame = -3 / +3
Query: 454 ATQKGKVGIVLDFNWYEPFTNSTEDQKAAQRARDFHIGW 338
ATQKGKVGIVLDFNWYEP TNSTEDQ AAQRARDFHIGW
Sbjct: 27 ATQKGKVGIVLDFNWYEPLTNSTEDQAAAQRARDFHIGW 143
Score = 86.8 bits (183), Expect(4) = 1e-061
Identities = 37/41 (90%), Positives = 39/41 (95%)
Frame = +3 / -2
Query: 339 QPIWKSLALCAAF*SSVEFVKGSYQLKSRTIPTLPF*VAWY 461
QPIWKSLALCAA *SSVE V+GSYQLKSRTIPTLPF*VA+Y
Sbjct: 142 QPIWKSLALCAAA*SSVELVRGSYQLKSRTIPTLPF*VAYY 20
Score = 83.5 bits (176), Expect(3) = 2e-054
Identities = 34/41 (82%), Positives = 37/41 (90%)
Frame = +2 / -1
Query: 338 PTNMEVPGPLRCFLIFS*VCKRFIPVEVKNYPDLAFLSCLV 460
PTNME+PGPLRC LIF *V KRFIPVEV NYP+LAFLSCL+
Sbjct: 143 PTNMEIPGPLRCCLIFG*VGKRFIPVEV*NYPNLAFLSCLL 21
Score = 80.8 bits (170), Expect(3) = 3e-046
Identities = 33/40 (82%), Positives = 37/40 (92%)
Frame = +1 / -3
Query: 337 TNQYGSPWPFALLFDLQLSL*KVHTS*SQELSRPCLSELP 456
TNQYG+PWPFALL DL+LS *+VHTS*S ELS+PCLSELP
Sbjct: 144 TNQYGNPWPFALLLDLRLSW*EVHTS*SLELSQPCLSELP 25
Score = 74.4 bits (156), Expect(3) = 1e-044
Identities = 34/43 (79%), Positives = 37/43 (86%)
Frame = -1 / +1
Query: 456 RQLRKARSG*FLTSTGMNLLQTQLKIKKQRKGPGTSILVGFLI 328
RQLRKAR G*F TSTGMNLL TQ KIK+QRKGPG SILVG ++
Sbjct: 25 RQLRKARLG*F*TSTGMNLLPTQPKIKQQRKGPGISILVGKIL 153
Score = 74.4 bits (156), Expect(4) = 5e-050
Identities = 34/42 (80%), Positives = 35/42 (83%)
Frame = -2 / +2
Query: 461 IPGNSERQGRDSS*LQLV*TFYKLN*RSKSSAKGQGLPYWLV 336
I GNSERQG DSS LQLV*T Y+LN RS SSAKGQG PYWLV
Sbjct: 20 IIGNSERQGWDSSRLQLV*TSYQLNRRSSSSAKGQGFPYWLV 145
Score = 35.0 bits (70), Expect(4) = 3e-068
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = -3 / +3
Query: 106 VQIGQMAHSIWLYIVPSGM 50
+ + AHS+WLYIVP+GM
Sbjct: 654 INVPVQAHSVWLYIVPTGM 710
Score = 32.7 bits (65), Expect(4) = 1e-061
Identities = 10/14 (71%), Positives = 13/14 (92%)
Frame = +1 / -3
Query: 52 CPMGRCKAKLSAPS 93
CP+GRCKA+LS P+
Sbjct: 708 CPLGRCKARLSVPA 667
Score = 31.3 bits (62), Expect(3) = 2e-054
Identities = 11/12 (91%), Positives = 12/12 (100%)
Frame = +2 / -1
Query: 50 HARWDDVKPN*V 85
HARWDDVKP+*V
Sbjct: 710 HARWDDVKPD*V 675
Score = 27.6 bits (54), Expect(4) = 5e-050
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = -2 / +2
Query: 89 GALNLALHRPIGH 51
G L+LALHRP GH
Sbjct: 671 GTLSLALHRPNGH 709
Score = 26.7 bits (52), Expect(3) = 3e-046
Identities = 11/13 (84%), Positives = 11/13 (84%)
Frame = +3 / -2
Query: 51 MPDGTM*SQIECA 89
MP GTM*SQ ECA
Sbjct: 709 MPVGTM*SQTECA 671
Score = 26.3 bits (51), Expect(4) = 1e-061
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +3 / -2
Query: 93 CPICTPFL 116
CPICTPFL
Sbjct: 556 CPICTPFL 533
Score = 24.4 bits (47), Expect(4) = 5e-050
Identities = 7/10 (70%), Positives = 9/10 (90%)
Frame = -2 / +2
Query: 116 KEWRANWTDG 87
K+WRA+WT G
Sbjct: 533 KKWRADWTAG 562
Score = 24.0 bits (46), Expect(4) = 3e-068
Identities = 8/15 (53%), Positives = 12/15 (80%)
Frame = -3 / +3
Query: 133 VQYYFQRNGVQIGQM 89
+ + +RNGVQIGQ+
Sbjct: 516 LNFAVERNGVQIGQL 560
Score = 23.1 bits (44), Expect(3) = 1e-044
Identities = 7/13 (53%), Positives = 9/13 (69%)
Frame = -1 / +1
Query: 126 ITFKGMACKLDRW 88
+ K MAC+LD W
Sbjct: 523 LQLKEMACRLDSW 561
>gb|BF587276.1|BF587276 FM1_34_D09.b1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 503
Score = 248 bits (536), Expect = 7e-065
Identities = 101/124 (81%), Positives = 103/124 (83%)
Frame = -3 / +1
Query: 694 IXXDYAXXXFKTXXXRVKXWXXLXEPRIVAXXGYDKGLXPPXXCTQCTAXXNSSTEPYIV 515
I DYA FKT RVK W L EPRIV+ GYDKG+ PP CTQCTA NSSTEPYIV
Sbjct: 130 IFADYADFCFKTFGDRVKNWFTLNEPRIVSFLGYDKGIDPPNRCTQCTAGGNSSTEPYIV 309
Query: 514 VHNILLSHATAVARYRNKYQATQKGKVGIVLDFNWYEPFTNSTEDQKAAQRARDFHIGWF 335
VHNILLSHATAVARYRNKYQATQKGKVGIVLDFNWYEP TNSTEDQ AAQRARDFHIGWF
Sbjct: 310 VHNILLSHATAVARYRNKYQATQKGKVGIVLDFNWYEPLTNSTEDQAAAQRARDFHIGWF 489
Query: 334 LDPL 323
LDPL
Sbjct: 490 LDPL 501
Score = 220 bits (475), Expect = 2e-056
Identities = 102/125 (81%), Positives = 104/125 (83%)
Frame = +3 / -1
Query: 321 INGSRNQPIWKSLALCAAF*SSVEFVKGSYQLKSRTIPTLPF*VAWYLLRYLATAVA*DR 500
INGSRNQPIWKSLALCAA *SSVE V+GSYQLKSRTIPTLPF*VAWYLLRYLATAVA*D+
Sbjct: 503 INGSRNQPIWKSLALCAAA*SSVELVRGSYQLKSRTIPTLPF*VAWYLLRYLATAVA*DK 324
Query: 501 RML*TTM*GSVDEFXXAVHCVHXXGGXSPLS*PXNATILGSXNXXQXLTRXXXVLKXXSA 680
RML*TTM*GSVDEF AVHCVH GG PLS*P N TILGS N Q LTR VLK SA
Sbjct: 323 RML*TTM*GSVDEFPPAVHCVHRLGGSIPLS*PRNDTILGSFNVNQFLTRSPKVLKQKSA 144
Query: 681 *SXXM 695
*S M
Sbjct: 143 *SANM 129
Score = 218 bits (471), Expect = 6e-056
Identities = 95/125 (76%), Positives = 100/125 (80%)
Frame = +1 / -2
Query: 322 LMDQETNQYGSPWPFALLFDLQLSL*KVHTS*SQELSRPCLSELPGIYCGILQLQ*HEIG 501
LMDQETNQYGSPWPFALL DLQLS *+VHTS*S ELS+PCLSELPGIYCGILQ Q*HEI
Sbjct: 502 LMDQETNQYGSPWPFALLLDLQLSW*EVHTS*SLELSQPCLSELPGIYCGILQQQ*HEIR 323
Query: 502 ECYEQQCKVLSMSSHXQCIVCTXXGGXALYHNQXMLLSLAHXXXXSX*LXXXXS*NXXQH 681
CYEQQCKVLSMSSH QCIVCT GG +LYHNQ M+LSLAH S *L S*N +H
Sbjct: 322 GCYEQQCKVLSMSSHRQCIVCTD*GGQSLYHNQGMILSLAHLM*TSS*LDRQKS*NKNRH 143
Query: 682 SXXXC 696
S C
Sbjct: 142 SQQIC 128
Score = 209 bits (450), Expect = 5e-053
Identities = 97/125 (77%), Positives = 98/125 (78%)
Frame = -2 / +3
Query: 695 HXX*LC*XXFQDXXXSSQXLXXIX*AKDSSIXWL**RAXPPXXVHTMHCXXELIDRTLHC 516
H *LC FQD SSQ L I *AKDS I WL**R PP VHTMHC ELIDRTLHC
Sbjct: 129 HIC*LCRFLFQDFWRSSQELVHIK*AKDSIIPWL**RD*PP*SVHTMHCRWELIDRTLHC 308
Query: 515 CS*HSPISCYCSCKIPQ*IPGNSERQGRDSS*LQLV*TFYKLN*RSKSSAKGQGLPYWLV 336
CS*H ISCYC CKIPQ*IPGNSERQG DSS LQLV*T Y+LN*RS SSAKGQGLPYWLV
Sbjct: 309 CS*HPLISCYCCCKIPQ*IPGNSERQGWDSSRLQLV*TSYQLN*RSSSSAKGQGLPYWLV 488
Query: 335 S*SIN 321
S*SIN
Sbjct: 489 S*SIN 503
Score = 204 bits (441), Expect = 8e-052
Identities = 98/125 (78%), Positives = 99/125 (79%)
Frame = -1 / +2
Query: 696 TXXXTMLXXVSRXXXXESXTGXXXMSQG**HXLVMIKGXXPLXGAHNALXVXTHRQNLTL 517
T TM VSR ES TG MSQG* H LVMIKG PL GAHNAL V THRQNLTL
Sbjct: 128 TYLLTMPIFVSRLLAIESRTGSH*MSQG*YHSLVMIKGLTPLIGAHNALPVGTHRQNLTL 307
Query: 516 LFITFSYLMLLQLQDTAINTRQLRKARSG*FLTSTGMNLLQTQLKIKKQRKGPGTSILVG 337
LFIT SYLMLL LQDTAINTRQLRKAR G*F TSTGMNLL TQLKIK+QRKGPGTSILVG
Sbjct: 308 LFITSSYLMLLLLQDTAINTRQLRKARLG*F*TSTGMNLLPTQLKIKQQRKGPGTSILVG 487
Query: 336 FLIH* 322
FLIH*
Sbjct: 488 FLIH* 502
Score = 116 bits (247), Expect(2) = 3e-043
Identities = 49/53 (92%), Positives = 50/53 (94%)
Frame = +2 / -3
Query: 323 *WIKKPTNMEVPGPLRCFLIFS*VCKRFIPVEVKNYPDLAFLSCLVFIAVSCN 481
*WIKKPTNMEVPGPLRC LIFS*V KRFIPVEV NYP+LAFLSCLVFIAVSCN
Sbjct: 501 *WIKKPTNMEVPGPLRCCLIFS*VGKRFIPVEV*NYPNLAFLSCLVFIAVSCN 343
Score = 80.8 bits (170), Expect(2) = 3e-043
Identities = 36/56 (64%), Positives = 36/56 (64%)
Frame = +2 / -3
Query: 527 FCR*VXTXSALCAPXRGXKPFIITXXCYYPWLX*XXPVLDSXXXXLETXXSIVXXY 694
FCR*V T SALCAP RG PFIIT YYPWL * PVLDS LET IV Y
Sbjct: 297 FCR*VPTGSALCAPIRGVNPFIITKE*YYPWLI*CEPVLDSIAKSLETKIGIVSKY 130
>gb|CW299014.1|CW299014 104_781_11462882_116_35659_001 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11462882, DNA
sequence
Length = 662
Score = 162 bits (349), Expect(4) = 9e-058
Identities = 65/71 (91%), Positives = 67/71 (94%)
Frame = -3 / -2
Query: 337 FLDPLINGQYPKIMQDIVKDRLPSFTPEQAKLVKGSSDYFGINQYTTYYIADQQTPPQGP 158
FLDPLINGQYPK MQDIVKDRLPSFTPEQAKLVKGSSDYFGINQYTT YI++QQT QGP
Sbjct: 532 FLDPLINGQYPKTMQDIVKDRLPSFTPEQAKLVKGSSDYFGINQYTTNYISNQQTTQQGP 353
Query: 157 PSYSSDWGVQY 125
PSYSSDWGVQY
Sbjct: 352 PSYSSDWGVQY 320
Score = 149 bits (320), Expect(4) = 2e-054
Identities = 64/71 (90%), Positives = 66/71 (92%)
Frame = +3 / +3
Query: 126 YWTPQSDE*LGGPCGGVC*SAM*YVVY*LIPK*SDEPLTSLACSGVKLGSRSFTMSCIIF 305
Y TPQSDE*LGGPC VC* M*+VVY*LIPK*SDEPLTSLACSGVKLGSRSFTMSCI+F
Sbjct: 321 Y*TPQSDE*LGGPC*VVC*FEM*FVVY*LIPK*SDEPLTSLACSGVKLGSRSFTMSCIVF 500
Query: 306 GYCPFINGSRN 338
GYCPFINGSRN
Sbjct: 501 GYCPFINGSRN 533
Score = 140 bits (300), Expect(3) = 2e-046
Identities = 62/75 (82%), Positives = 64/75 (85%)
Frame = +2 / +2
Query: 116 LKVILDAPVGRVARWSLRRSLLICNVVCSILIDPEIV**ALD*LGLFRCETW*PVFHNVL 295
L VIL+ PV RVA WSL SLLI NVVC ILIDPEIV**ALD*L LFRCETW*P+FHNVL
Sbjct: 311 LTVILNTPVRRVAWWSLLSSLLI*NVVCCILIDPEIV**ALD*LSLFRCETW*PIFHNVL 490
Query: 296 HYLWILPIY*WIKKP 340
H LWIL IY*WIKKP
Sbjct: 491 HCLWILSIY*WIKKP 535
Score = 129 bits (276), Expect(4) = 8e-047
Identities = 59/73 (80%), Positives = 62/73 (84%)
Frame = -1 / -3
Query: 339 GFLIH**MGNIQR*CKTL*KTGYQVSHLNRPS*SRAHQTISGSINILHTTLQINKLLRRD 160
GFLIH**M NIQR C+TL*K GYQVSHLNR S*SRAHQTISGSINI TT QINKLL +D
Sbjct: 534 GFLIH**MDNIQRQCRTL*KIGYQVSHLNRLS*SRAHQTISGSINIQQTTFQINKLLSKD 355
Query: 159 HRATRPTGASNIT 121
H+ATR TG NIT
Sbjct: 354 HQATRLTGVFNIT 316
Score = 122 bits (261), Expect(4) = 8e-040
Identities = 56/68 (82%), Positives = 58/68 (85%)
Frame = -2 / -1
Query: 338 VS*SINKWAISKDNARHCERPATKFHT*TGQASQGLIRLFRDQSIYYILHCRSTNSSAGT 159
VS*SINKW ISKDNA HCER ATKFHT*TG ASQGLIRLFRDQSIY LH +STN SA T
Sbjct: 533 VS*SINKWTISKDNAGHCERSATKFHT*TG*ASQGLIRLFRDQSIYNKLHFKSTNYSART 354
Query: 158 TELLVRLG 135
T+LLV LG
Sbjct: 353 TKLLV*LG 330
Score = 120 bits (256), Expect(3) = 1e-037
Identities = 59/73 (80%), Positives = 62/73 (84%)
Frame = +1 / +1
Query: 121 SNIGRPSRTSSSVVPAEEFVDLQCSM*YID*SRNSLMSP*LAWPVQV*NLVAGLSQCLAL 300
S I PS+TSS VV AE FVDL+CS+ YID*SRNSLMSP*LA PVQV*NLVA LSQC AL
Sbjct: 316 SYIEHPSQTSSLVVLAE*FVDLKCSLLYID*SRNSLMSP*LA*PVQV*NLVADLSQCPAL 495
Query: 301 SLDIAHLLMDQET 339
SLDI HLLMDQET
Sbjct: 496 SLDIVHLLMDQET 534
Score = 59.7 bits (124), Expect(4) = 9e-058
Identities = 21/30 (70%), Positives = 25/30 (83%)
Frame = -3 / -3
Query: 106 VQIGQMAHSIWLYIVPSGMYGVVNYLKEKY 17
+ + AHS+WLYIVP+GMYGVV YLKEKY
Sbjct: 105 INVPVQAHSVWLYIVPTGMYGVVTYLKEKY 16
Score = 56.5 bits (117), Expect(4) = 2e-054
Identities = 20/27 (74%), Positives = 24/27 (88%)
Frame = +1 / +3
Query: 13 AGTFPLGSSRLHTCPMGRCKAKLSAPS 93
+GTFPLG RLHTCP+GRCKA+LS P+
Sbjct: 12 SGTFPLGR*RLHTCPLGRCKARLSVPA 92
Score = 56.1 bits (116), Expect(4) = 8e-047
Identities = 21/25 (84%), Positives = 22/25 (88%)
Frame = -2 / -2
Query: 89 GALNLALHRPIGHVWSRELPKGKVP 15
G L+LALHRP GHVWSR LPKGKVP
Sbjct: 88 GTLSLALHRPNGHVWSRHLPKGKVP 14
Score = 50.6 bits (104), Expect(3) = 2e-046
Identities = 21/24 (87%), Positives = 21/24 (87%)
Frame = +3 / +2
Query: 18 YFSFR*FTTPYMPDGTM*SQIECA 89
YFSFR* TTPYMP GTM*SQ ECA
Sbjct: 17 YFSFR*VTTPYMPVGTM*SQTECA 88
Score = 46.4 bits (95), Expect(3) = 1e-037
Identities = 20/23 (86%), Positives = 21/23 (91%)
Frame = +2 / +1
Query: 17 VLFL*VVHDSIHARWDDVKPN*V 85
VLFL*V DSIHARWDDVKP+*V
Sbjct: 16 VLFL*VGDDSIHARWDDVKPD*V 84
Score = 41.8 bits (85), Expect(4) = 8e-040
Identities = 19/23 (82%), Positives = 19/23 (82%)
Frame = -1 / -1
Query: 84 TQFGFTSSHRACMES*TT*RKST 16
TQ GFTSS RACMES T*RKST
Sbjct: 83 TQSGFTSSQRACMESSPT*RKST 15
Score = 38.6 bits (78), Expect(4) = 2e-054
Identities = 13/16 (81%), Positives = 15/16 (93%)
Frame = +1 / +3
Query: 337 TNQYGSPWPFALLFDL 384
T+QYG+PWPFALL DL
Sbjct: 615 THQYGNPWPFALLLDL 662
Score = 37.3 bits (75), Expect(3) = 2e-046
Identities = 13/15 (86%), Positives = 14/15 (93%)
Frame = +2 / +1
Query: 338 PTNMEVPGPLRCFLI 382
PTNME+PGPLRC LI
Sbjct: 616 PTNMEIPGPLRCCLI 660
Score = 35.4 bits (71), Expect(4) = 9e-058
Identities = 14/19 (73%), Positives = 17/19 (89%)
Frame = -1 / -1
Query: 384 KIKKQRKGPGTSILVGFLI 328
KIK+QRKGPG SILVG ++
Sbjct: 662 KIKQQRKGPGISILVGKIL 606
Score = 35.0 bits (70), Expect(4) = 8e-047
Identities = 13/16 (81%), Positives = 13/16 (81%)
Frame = -2 / -2
Query: 383 RSKSSAKGQGLPYWLV 336
RS SSAKGQG PYW V
Sbjct: 661 RSSSSAKGQGFPYWWV 614
Score = 33.6 bits (67), Expect(4) = 8e-040
Identities = 13/14 (92%), Positives = 13/14 (92%)
Frame = -3 / -3
Query: 382 DQKAAQRARDFHIG 341
DQ AAQRARDFHIG
Sbjct: 660 DQAAAQRARDFHIG 619
Score = 31.8 bits (63), Expect(3) = 1e-037
Identities = 13/14 (92%), Positives = 13/14 (92%)
Frame = +3 / +2
Query: 342 PIWKSLALCAAF*S 383
PIWKSLALCAA *S
Sbjct: 620 PIWKSLALCAAA*S 661
Score = 26.3 bits (51), Expect(4) = 2e-054
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +3 / +2
Query: 93 CPICTPFL 116
CPICTPFL
Sbjct: 203 CPICTPFL 226
Score = 24.4 bits (47), Expect(4) = 8e-047
Identities = 7/10 (70%), Positives = 9/10 (90%)
Frame = -2 / -2
Query: 116 KEWRANWTDG 87
K+WRA+WT G
Sbjct: 226 KKWRADWTAG 197
Score = 24.0 bits (46), Expect(4) = 9e-058
Identities = 8/15 (53%), Positives = 12/15 (80%)
Frame = -3 / -3
Query: 133 VQYYFQRNGVQIGQM 89
+ + +RNGVQIGQ+
Sbjct: 243 LNFAVERNGVQIGQL 199
Score = 23.1 bits (44), Expect(4) = 8e-040
Identities = 7/13 (53%), Positives = 9/13 (69%)
Frame = -1 / -1
Query: 126 ITFKGMACKLDRW 88
+ K MAC+LD W
Sbjct: 236 LQLKEMACRLDSW 198
>gb|BE125777.1|BE125777 DG1_57_B08.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 535
Score = 202 bits (435), Expect(2) = 1e-057
Identities = 77/129 (59%), Positives = 95/129 (73%)
Frame = -3 / +1
Query: 469 RNKYQATQKGKVGIVLDFNWYEPFTNSTEDQKAAQRARDFHIGWFLDPLINGQYPKIMQD 290
R KYQ TQKG++GI+LDF WYE TNST DQ AA+R+RDFH+GWFL P+I GQYP +Q
Sbjct: 4 RGKYQLTQKGRIGILLDFVWYEALTNSTADQAAAERSRDFHVGWFLHPIIYGQYPNSVQK 183
Query: 289 IVKDRLPSFTPEQAKLVKGSSDYFGINQYTTYYIADQQTPPQGPPSYSSDWGVQYYFQRN 110
IVK+RLP FT ++ +VKGS DY G+NQYT YY+ DQQ SYSSDW ++ ++RN
Sbjct: 184 IVKERLPKFTADEINIVKGSIDYVGVNQYTAYYVRDQQPNATTLLSYSSDWHAEFVYERN 363
Query: 109 GVQIGQMAH 83
GV IG H
Sbjct: 364 GVPIGPRLH 390
Score = 102 bits (218), Expect(2) = 1e-024
Identities = 58/111 (52%), Positives = 64/111 (57%)
Frame = +3 / -3
Query: 138 QSDE*LGGPCGGVC*SAM*YVVY*LIPK*SDEPLTSLACSGVKLGSRSFTMSCIIFGYCP 317
QS+E*L C*S * VY L P *S EP T L S V GS SFT+ GY P
Sbjct: 335 QSEE*LSKVVAFGC*SRT**AVYWLTPT*SIEPFTMLISSAVNFGSLSFTIF*TELGY*P 156
Query: 318 FINGSRNQPIWKSLALCAAF*SSVEFVKGSYQLKSRTIPTLPF*VAWYLLR 470
+ G RN P WKSL L AA S+VEFV+ SY KSR IP LPF V+ Y R
Sbjct: 155 *MIGCRNHPTWKSLDLSAAAWSAVEFVRASYHTKSRRIPILPFCVS*YFPR 3
Score = 42.8 bits (87), Expect(2) = 1e-057
Identities = 16/24 (66%), Positives = 19/24 (79%)
Frame = -3 / +3
Query: 88 AHSIWLYIVPSGMYGVVNYLKEKY 17
A+S WLYIVP G+Y V Y+KEKY
Sbjct: 396 ANSDWLYIVPWGLYKAVTYVKEKY 467
Score = 31.3 bits (62), Expect(2) = 1e-024
Identities = 15/24 (62%), Positives = 15/24 (62%)
Frame = +3 / -1
Query: 18 YFSFR*FTTPYMPDGTM*SQIECA 89
YFS * T Y P GTM*SQ E A
Sbjct: 466 YFSLT*VTALYSPQGTM*SQSEFA 395
>gb|CF487437.1|CF487437 POL1_43_F12.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_43_F12_A002 5', mRNA sequence
Length = 754
Score = 175 bits (377), Expect(3) = 2e-057
Identities = 70/120 (58%), Positives = 88/120 (73%)
Frame = -3 / +1
Query: 541 NSSTEPYIVVHNILLSHATAVARYRNKYQATQKGKVGIVLDFNWYEPFTNSTEDQKAAQR 362
++S EPYI H++LLSHA AV YR KY+ Q GK+GI+LDF WYEP T S ED+ AA R
Sbjct: 160 STSPEPYIAGHHLLLSHAAAVKLYREKYKVHQGGKIGILLDFVWYEPLTKSIEDEFAAHR 339
Query: 361 ARDFHIGWFLDPLINGQYPKIMQDIVKDRLPSFTPEQAKLVKGSSDYFGINQYTTYYIAD 182
AR F +GWFL P+ G YP+ M+ IV RLP+FT EQ+ +VKGS+DY IN YTTYY ++
Sbjct: 340 ARMFTLGWFLHPITYGHYPETMEKIVMGRLPNFTFEQSAMVKGSADYIAINHYTTYYASN 519
Score = 56.5 bits (117), Expect(3) = 2e-057
Identities = 20/46 (43%), Positives = 31/46 (67%)
Frame = -3 / +1
Query: 154 SYSSDWGVQYYFQRNGVQIGQMAHSIWLYIVPSGMYGVVNYLKEKY 17
SY +DW + ++R+GV IG +S WLY+VP G+Y + + KEK+
Sbjct: 541 SYLNDWHAKISYERDGVPIGPRGYSDWLYVVPWGLYKALIWTKEKF 678
Score = 30.4 bits (60), Expect(3) = 2e-057
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = -3 / +3
Query: 682 YAXXXFKTXXXRVKXWXXLXEPRIV 608
+A FKT RVK W + EPR V
Sbjct: 105 FADFCFKTYGDRVKFWFTINEPRAV 179
>gb|BI075368.1|BI075368 IP1_19_F12.b1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 620
Score = 156 bits (335), Expect(3) = 2e-047
Identities = 60/84 (71%), Positives = 71/84 (84%)
Frame = -3 / +1
Query: 376 KAAQRARDFHIGWFLDPLINGQYPKIMQDIVKDRLPSFTPEQAKLVKGSSDYFGINQYTT 197
+ AQRARDFHIGWF+DPLING YP+IMQD+VK+RLP FTPEQAKLVKGS+DY GIN+YT+
Sbjct: 4 RGAQRARDFHIGWFVDPLINGHYPQIMQDLVKERLPRFTPEQAKLVKGSADYIGINEYTS 183
Query: 196 YYIADQQTPPQGPPSYSSDWGVQY 125
Y+ Q+ Q P SYS+DW VQY
Sbjct: 184 SYMKGQKLLQQTPSSYSADWQVQY 255
Score = 118 bits (253), Expect(2) = 4e-032
Identities = 57/82 (69%), Positives = 59/82 (71%)
Frame = +3 / -1
Query: 126 YWTPQSDE*LGGPCGGVC*SAM*YVVY*LIPK*SDEPLTSLACSGVKLGSRSFTMSCIIF 305
YWT QS E*L G C M* VY LIP *S EPLT+LACSGV LGS SFT SCII
Sbjct: 254 YWTCQSAE*LLGVCWSSFCPFM*LDVYSLIPM*SAEPLTNLACSGVNLGSLSFTRSCIIC 75
Query: 306 GYCPFINGSRNQPIWKSLALCA 371
G CPFINGS NQP+WKSLAL A
Sbjct: 74 G*CPFINGSTNQPMWKSLALWA 9
Score = 93.6 bits (198), Expect(2) = 4e-023
Identities = 41/81 (50%), Positives = 49/81 (60%)
Frame = +2 / -3
Query: 125 ILDAPVGRVARWSLRRSLLICNVVCSILIDPEIV**ALD*LGLFRCETW*PVFHNVLHYL 304
ILD P+GRVA L L +V + ID +V ALD L R E *P+FH +LHYL
Sbjct: 255 ILDLPIGRVATGRLLEQFLSLHVAGCVFIDTNVVCRALDQFSLLRSEPG*PLFHKILHYL 76
Query: 305 WILPIY*WIKKPTNMEVPGPL 367
WI+ IY WI KP N+EVP L
Sbjct: 75 WIMSIYQWINKPANVEVPSSL 13
Score = 53.3 bits (110), Expect(3) = 2e-047
Identities = 20/24 (83%), Positives = 22/24 (91%)
Frame = -3 / +2
Query: 88 AHSIWLYIVPSGMYGVVNYLKEKY 17
A+S WLYIVP+GMYG VNYLKEKY
Sbjct: 524 ANSNWLYIVPTGMYGCVNYLKEKY 595
Score = 42.3 bits (86), Expect(2) = 4e-032
Identities = 18/24 (75%), Positives = 20/24 (83%)
Frame = +3 / -3
Query: 18 YFSFR*FTTPYMPDGTM*SQIECA 89
YFS R*FT PY+P GTM*SQ+E A
Sbjct: 594 YFSLR*FTHPYIPVGTM*SQLEFA 523
Score = 37.3 bits (75), Expect(2) = 4e-023
Identities = 14/25 (56%), Positives = 18/25 (72%)
Frame = +1 / -1
Query: 19 TFPLGSSRLHTCPMGRCKAKLSAPS 93
T P GSS +HT P GRCKA ++P+
Sbjct: 593 TSP*GSSHIHTSPSGRCKAN*NSPT 519
Score = 21.7 bits (41), Expect(3) = 2e-047
Identities = 5/9 (55%), Positives = 7/9 (77%)
Frame = -2 / +3
Query: 113 EWRANWTDG 87
+W+ NWT G
Sbjct: 363 QWQTNWTKG 389
>gb|BM324257.1|BM324257 PIC1_26_B11.b1_A002 Pathogen-infected compatible 1 (PIC1) Sorghum
bicolor cDNA, mRNA sequence
Length = 487
Score = 181 bits (389), Expect = 1e-044
Identities = 73/106 (68%), Positives = 77/106 (72%)
Frame = -3 / +1
Query: 694 IXXDYAXXXFKTXXXRVKXWXXLXEPRIVAXXGYDKGLXPPXXCTQCTAXXNSSTEPYIV 515
+ DYA FK+ VK W EPRIVA GYD G PP CT+C A NS+TEPYIV
Sbjct: 169 LFTDYADFCFKSFGDHVKHWFTFNEPRIVALLGYDGGSIPPQRCTKCAAGGNSATEPYIV 348
Query: 514 VHNILLSHATAVARYRNKYQATQKGKVGIVLDFNWYEPFTNSTEDQ 377
HN LLSHA AVARYRNKYQA QKGKVGIVLDFNWYEP TNSTEDQ
Sbjct: 349 AHNFLLSHAAAVARYRNKYQAAQKGKVGIVLDFNWYEPLTNSTEDQ 486
Score = 133 bits (285), Expect = 3e-030
Identities = 68/102 (66%), Positives = 72/102 (70%)
Frame = +3 / -3
Query: 381 SSVEFVKGSYQLKSRTIPTLPF*VAWYLLRYLATAVA*DRRML*TTM*GSVDEFXXAVHC 560
SSVEFV+GSYQLKSRTIPT PF* A YLLRYLATA A D+R L* T+*GSV EF A H
Sbjct: 482 SSVEFVRGSYQLKSRTIPTFPF*AA*YLLRYLATAAACDKRKL*ATI*GSVAEFPPAAHL 303
Query: 561 VHXXGGXSPLS*PXNATILGSXNXXQXLTRXXXVLKXXSA*S 686
VH GG P S*P +ATILGS N Q T LK SA*S
Sbjct: 302 VHL*GGIDPPS*PSSATILGSLNVNQCFT*SPKDLKQKSA*S 177
>gb|CW398117.1|CW398117 fsbb001f087g20k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f087g20, DNA
sequence
Length = 748
Score = 73.0 bits (153), Expect(4) = 8e-042
Identities = 28/49 (57%), Positives = 34/49 (69%)
Frame = -3 / -1
Query: 337 FLDPLINGQYPKIMQDIVKDRLPSFTPEQAKLVKGSSDYFGINQYTTYY 191
F DP G YP +M+ V DRLP FT ++A LVKG+ D+ GIN YTTYY
Sbjct: 160 FADPFFFGDYPALMRSRVGDRLPKFTADEAALVKGALDFVGINHYTTYY 14
Score = 59.3 bits (123), Expect(4) = 8e-042
Identities = 20/39 (51%), Positives = 29/39 (74%)
Frame = -3 / -1
Query: 454 ATQKGKVGIVLDFNWYEPFTNSTEDQKAAQRARDFHIGW 338
ATQ G++GI D W+EP TN+T D +AA+R ++F +GW
Sbjct: 373 ATQNGELGIAFDVMWFEPMTNTTADIEAAKRGQEFQLGW 257
Score = 49.6 bits (102), Expect(4) = 8e-042
Identities = 20/42 (47%), Positives = 22/42 (52%)
Frame = -3 / -3
Query: 685 DYAXXXFKTXXXRVKXWXXLXEPRIVAXXGYDKGLXPPXXCT 560
+YA FK RVK W L EP VA GYD GL P C+
Sbjct: 731 EYAETCFKAFGDRVKHWITLNEPHTVAIQGYDAGLQAPGRCS 606
Score = 46.0 bits (94), Expect(4) = 8e-042
Identities = 17/31 (54%), Positives = 21/31 (67%)
Frame = -3 / -3
Query: 541 NSSTEPYIVVHNILLSHATAVARYRNKYQAT 449
NS TEPYIV HN +L+HAT YR Y+ +
Sbjct: 575 NSGTEPYIVAHNFILAHATVSDIYRRNYKVS 483
>gb|BG412794.1|BG412794 OV2_34_H07.b1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA
sequence
Length = 562
Score = 170 bits (365), Expect = 3e-041
Identities = 68/98 (69%), Positives = 79/98 (80%)
Frame = -3 / +1
Query: 310 YPKIMQDIVKDRLPSFTPEQAKLVKGSSDYFGINQYTTYYIADQQTPPQGPPSYSSDWGV 131
YP+IMQD+VK+RLP FTPEQAKLVKGS+DY GIN+YT+ Y+ Q+ Q P SYS+DW V
Sbjct: 1 YPQIMQDLVKERLPRFTPEQAKLVKGSADYIGINEYTSSYMKGQKLLQQTPSSYSADWQV 180
Query: 130 QYYFQRNGVQIGQMAHSIWLYIVPSGMYGVVNYLKEKY 17
QY F RNG IG A+S WLYIVP+GMYG VNYLKEKY
Sbjct: 181 QYVFARNGKPIGPKANSNWLYIVPTGMYGCVNYLKEKY 294
Score = 119 bits (255), Expect = 4e-026
Identities = 62/97 (63%), Positives = 65/97 (67%)
Frame = +3 / -3
Query: 18 YFSFR*FTTPYMPDGTM*SQIECAICPICTPFL*K*YWTPQSDE*LGGPCGGVC*SAM*Y 197
YFS R*FT PY+P GTM*SQ+E A PI P K YWT QS E*L G C M*
Sbjct: 293 YFSLR*FTHPYIPVGTM*SQLEFAFGPIGLPLRAKTYWTCQSAE*LLGVCWSSFCPFM*L 114
Query: 198 VVY*LIPK*SDEPLTSLACSGVKLGSRSFTMSCIIFG 308
VY LIP *S EPLT+LACSGV LGS SFT SCII G
Sbjct: 113 DVYSLIPM*SAEPLTNLACSGVNLGSLSFTRSCIICG 3
>gb|BG412795.1|BG412795 OV2_34_H08.b1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA
sequence
Length = 492
Score = 170 bits (365), Expect = 3e-041
Identities = 67/98 (68%), Positives = 80/98 (81%)
Frame = -3 / +1
Query: 310 YPKIMQDIVKDRLPSFTPEQAKLVKGSSDYFGINQYTTYYIADQQTPPQGPPSYSSDWGV 131
YP++MQD+VK+RLP+FTPEQAKLVKGS+DY GIN+YT+ Y+ Q+ Q P SYS+DW V
Sbjct: 1 YPQLMQDLVKERLPTFTPEQAKLVKGSADYIGINEYTSSYMKGQKLLQQTPSSYSADWQV 180
Query: 130 QYYFQRNGVQIGQMAHSIWLYIVPSGMYGVVNYLKEKY 17
QY F RNG IG A+S WLYIVP+GMYG VNYLKEKY
Sbjct: 181 QYVFARNGKPIGPKANSNWLYIVPTGMYGCVNYLKEKY 294
Score = 115 bits (246), Expect = 7e-025
Identities = 60/97 (61%), Positives = 64/97 (65%)
Frame = +3 / -2
Query: 18 YFSFR*FTTPYMPDGTM*SQIECAICPICTPFL*K*YWTPQSDE*LGGPCGGVC*SAM*Y 197
YFS R*FT PY+P GTM*SQ+E A PI P K YWT QS E*L G C M*
Sbjct: 293 YFSLR*FTHPYIPVGTM*SQLEFAFGPIGLPLRAKTYWTCQSAE*LLGVCWSSFCPFM*L 114
Query: 198 VVY*LIPK*SDEPLTSLACSGVKLGSRSFTMSCIIFG 308
VY LIP *S EPLT+LACSGV +GS SFT SCI G
Sbjct: 113 DVYSLIPM*SAEPLTNLACSGVNVGSLSFTRSCISCG 3
>gb|CW493896.1|CW493896 fsbb001f284o06k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f284o06, DNA
sequence
Length = 761
Score = 79.4 bits (167), Expect(4) = 3e-041
Identities = 31/59 (52%), Positives = 38/59 (64%)
Frame = -3 / +2
Query: 337 FLDPLINGQYPKIMQDIVKDRLPSFTPEQAKLVKGSSDYFGINQYTTYYIADQQTPPQG 161
F DP G YP +M+ V DRLP FT ++A LVKG+ D+ GIN YTTYY T P+G
Sbjct: 545 FADPFFFGDYPALMRSRVGDRLPKFTADEAALVKGALDFVGINHYTTYYTKHNSTNPRG 721
Score = 59.3 bits (123), Expect(4) = 3e-041
Identities = 20/39 (51%), Positives = 29/39 (74%)
Frame = -3 / +2
Query: 454 ATQKGKVGIVLDFNWYEPFTNSTEDQKAAQRARDFHIGW 338
ATQ G++GI D W+EP TN+T D +AA+R ++F +GW
Sbjct: 332 ATQNGELGIAFDVMWFEPMTNTTADIEAAKRGQEFQLGW 448
Score = 46.0 bits (94), Expect(4) = 3e-041
Identities = 17/31 (54%), Positives = 21/31 (67%)
Frame = -3 / +1
Query: 541 NSSTEPYIVVHNILLSHATAVARYRNKYQAT 449
NS TEPYIV HN +L+HAT YR Y+ +
Sbjct: 130 NSGTEPYIVAHNFILAHATVSDIYRRNYKVS 222
Score = 41.4 bits (84), Expect(4) = 3e-041
Identities = 16/30 (53%), Positives = 17/30 (56%)
Frame = -3 / +1
Query: 649 RVKXWXXLXEPRIVAXXGYDKGLXPPXXCT 560
RVK W L EP VA GYD GL P C+
Sbjct: 10 RVKHWITLNEPHTVAIQGYDAGLQAPGRCS 99
>gb|CL165780.1|CL165780 104_361_10808896_114_31820_112 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10808896, DNA
sequence
Length = 682
Score = 126 bits (269), Expect(4) = 4e-041
Identities = 49/71 (69%), Positives = 59/71 (83%)
Frame = -3 / +1
Query: 337 FLDPLINGQYPKIMQDIVKDRLPSFTPEQAKLVKGSSDYFGINQYTTYYIADQQTPPQGP 158
F+DPLING YP+IMQD+VK+RLP FTPEQAKLVKGS+DY GIN+YT+ Y+ Q+ Q P
Sbjct: 142 FVDPLINGHYPQIMQDLVKERLPRFTPEQAKLVKGSADYIGINEYTSSYMKGQKLLQQTP 321
Query: 157 PSYSSDWGVQY 125
SYS+DW VQY
Sbjct: 322 SSYSADWQVQY 354
Score = 97.3 bits (206), Expect(3) = 8e-026
Identities = 48/71 (67%), Positives = 49/71 (69%)
Frame = +3 / -3
Query: 126 YWTPQSDE*LGGPCGGVC*SAM*YVVY*LIPK*SDEPLTSLACSGVKLGSRSFTMSCIIF 305
YWT QS E*L G C M* VY LIP *S EPLT+LACSGV LGS SFT SCII
Sbjct: 353 YWTCQSAE*LLGVCWSSFCPFM*LDVYSLIPM*SAEPLTNLACSGVNLGSLSFTRSCIIC 174
Query: 306 GYCPFINGSRN 338
G CPFINGS N
Sbjct: 173 G*CPFINGSTN 141
Score = 43.2 bits (88), Expect(4) = 4e-041
Identities = 16/20 (80%), Positives = 18/20 (90%)
Frame = -3 / +2
Query: 88 AHSIWLYIVPSGMYGVVNYL 29
A+S WLYIVP+GMYG VNYL
Sbjct: 623 ANSNWLYIVPTGMYGCVNYL 682
Score = 36.8 bits (74), Expect(4) = 4e-041
Identities = 13/16 (81%), Positives = 14/16 (87%)
Frame = -3 / +2
Query: 385 EDQKAAQRARDFHIGW 338
+D AAQRARDFHIGW
Sbjct: 2 DDLSAAQRARDFHIGW 49
Score = 34.5 bits (69), Expect(3) = 8e-026
Identities = 15/20 (75%), Positives = 17/20 (85%)
Frame = +3 / -2
Query: 30 R*FTTPYMPDGTM*SQIECA 89
R*FT PY+P GTM*SQ+E A
Sbjct: 681 R*FTHPYIPVGTM*SQLEFA 622
Score = 26.7 bits (52), Expect(3) = 8e-026
Identities = 12/16 (75%), Positives = 13/16 (81%)
Frame = +3 / -2
Query: 339 QPIWKSLALCAAF*SS 386
QP+WKSLAL AA SS
Sbjct: 48 QPMWKSLALWAAERSS 1
Score = 21.7 bits (41), Expect(4) = 4e-041
Identities = 5/9 (55%), Positives = 7/9 (77%)
Frame = -2 / +3
Query: 113 EWRANWTDG 87
+W+ NWT G
Sbjct: 462 QWQTNWTKG 488
>gb|BG556907.1|BG556907 EM1_40_B08.b1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 556
Score = 163 bits (350), Expect(2) = 3e-040
Identities = 62/118 (52%), Positives = 83/118 (70%)
Frame = -3 / +2
Query: 541 NSSTEPYIVVHNILLSHATAVARYRNKYQATQKGKVGIVLDFNWYEPFTNSTEDQKAAQR 362
NS+TEPYI H+++L+HA+AV+ YR KYQA Q G++G+ L WYEP T + +D AA R
Sbjct: 89 NSTTEPYIAAHHLVLAHASAVSLYREKYQAEQGGRIGLTLLGWWYEPATETPDDIAAAAR 268
Query: 361 ARDFHIGWFLDPLINGQYPKIMQDIVKDRLPSFTPEQAKLVKGSSDYFGINQYTTYYI 188
DFH+GWF+ P++ G YP +M+ V RLPSFT E+AK VKGS D+ G N Y Y+
Sbjct: 269 MNDFHVGWFMHPMVYGDYPPVMRKNVGSRLPSFTNEEAKRVKGSFDFVGFNHYVAVYV 442
Score = 23.5 bits (45), Expect(2) = 3e-040
Identities = 6/13 (46%), Positives = 10/13 (76%)
Frame = -3 / +2
Query: 598 GYDKGLXPPXXCT 560
G+D+G+ PP C+
Sbjct: 20 GFDQGILPPQRCS 58
>gb|CL167736.1|CL167736 104_364_10810290_116_31803_354 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10810290, DNA
sequence
Length = 757
Score = 110 bits (235), Expect(2) = 3e-040
Identities = 43/81 (53%), Positives = 52/81 (64%)
Frame = -3 / +1
Query: 685 DYAXXXFKTXXXRVKXWXXLXEPRIVAXXGYDKGLXPPXXCTQCTAXXNSSTEPYIVVHN 506
DYA F+T RVK W EPR VA GYD GL P C++C A NS+TEPY+ H+
Sbjct: 82 DYAEFCFQTFGDRVKNWFTFNEPRCVAALGYDNGLHAPGRCSECAAGGNSTTEPYLAAHH 261
Query: 505 ILLSHATAVARYRNKYQATQK 443
++LSHA AV RYR+KYQ K
Sbjct: 262 LILSHAAAVRRYRDKYQVKCK 324
Score = 78.0 bits (164), Expect(2) = 3e-040
Identities = 28/40 (70%), Positives = 34/40 (85%)
Frame = -3 / +2
Query: 457 QATQKGKVGIVLDFNWYEPFTNSTEDQKAAQRARDFHIGW 338
Q QKG++GI+LDF WYEPF++S DQ AAQRARDFH+GW
Sbjct: 455 QLYQKGRIGILLDFVWYEPFSDSNADQAAAQRARDFHLGW 574
>gb|AW671741.1|AW671741 LG1_351_F12.b1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 663
Score = 144 bits (309), Expect(2) = 7e-040
Identities = 56/120 (46%), Positives = 72/120 (60%)
Frame = -3 / +3
Query: 541 NSSTEPYIVVHNILLSHATAVARYRNKYQATQKGKVGIVLDFNWYEPFTNSTEDQKAAQR 362
NSSTEPYI HN++L+HA V Y+ Y+ Q G VGI + WYEP N T+D A R
Sbjct: 258 NSSTEPYIAAHNMILAHAKTVNIYKKNYKTKQGGSVGITVYMRWYEPLRNITDDHLAVSR 437
Query: 361 ARDFHIGWFLDPLINGQYPKIMQDIVKDRLPSFTPEQAKLVKGSSDYFGINQYTTYYIAD 182
A+ F WFLDPL G YP M+ I+ LP FT + +L+K D+ G+N Y T Y+ D
Sbjct: 438 AQSFEAPWFLDPLFFGDYPHQMRQILGPNLPEFTEGEKQLMKNQIDFIGVNHYKTLYVKD 617
Score = 40.9 bits (83), Expect(2) = 7e-040
Identities = 17/49 (34%), Positives = 22/49 (44%)
Frame = -3 / +3
Query: 682 YAXXXFKTXXXRVKXWXXLXEPRIVAXXGYDKGLXPPXXCTQCTAXXNS 536
+A FK RVK W EP ++A Y G PP C++ NS
Sbjct: 108 FAEICFKMFGDRVKHWATFNEPNLMAKLAYFNGKFPPSHCSKPFGKCNS 254
>gb|BE361500.1|BE361500 DG1_81_B12.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 641
Score = 155 bits (333), Expect(2) = 1e-039
Identities = 58/113 (51%), Positives = 82/113 (72%)
Frame = -3 / +1
Query: 541 NSSTEPYIVVHNILLSHATAVARYRNKYQATQKGKVGIVLDFNWYEPFTNSTEDQKAAQR 362
NS+TEPY+V H++LL+HA+AV+ YR KYQ Q G++G+ L WYEP T+ ED +AA R
Sbjct: 118 NSTTEPYVVAHHLLLAHASAVSLYRRKYQGEQGGRIGLTLLAYWYEPATHKPEDVQAAAR 297
Query: 361 ARDFHIGWFLDPLINGQYPKIMQDIVKDRLPSFTPEQAKLVKGSSDYFGINQY 203
A DF +GWF+ PL++G YP +M+ RLP T +++ +V+GS D+ GINQY
Sbjct: 298 ANDFTLGWFMHPLVHGDYPPVMRRNAGSRLPVLTAQESAMVRGSFDFVGINQY 456
Score = 29.0 bits (57), Expect(2) = 1e-039
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = -3 / +1
Query: 622 EPRIVAXXGYDKGLXPPXXCT 560
EP I GYD+G PP C+
Sbjct: 16 EPNIEPLGGYDQGYLPPRRCS 78
>gb|CN143487.1|CN143487 WOUND1_16_C08.g1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_16_C08_A002 5', mRNA sequence
Length = 811
Score = 148 bits (318), Expect(2) = 2e-039
Identities = 61/120 (50%), Positives = 72/120 (60%)
Frame = -3 / +1
Query: 541 NSSTEPYIVVHNILLSHATAVARYRNKYQATQKGKVGIVLDFNWYEPFTNSTEDQKAAQR 362
NSSTEPYI HN++L+HA AV YR Y+ Q G +GI L WYEP N TED A R
Sbjct: 112 NSSTEPYIAAHNMILAHAMAVNIYRKNYKVKQGGSIGISLYMRWYEPLRNITEDHLAVSR 291
Query: 361 ARDFHIGWFLDPLINGQYPKIMQDIVKDRLPSFTPEQAKLVKGSSDYFGINQYTTYYIAD 182
A F WFLDPL G YP M+ I+ LP FT + +L+K D+ GIN Y T YI D
Sbjct: 292 ALSFQAPWFLDPLFFGDYPHQMRQILGPNLPKFTKGEKQLLKNQIDFIGINHYETLYIKD 471
Score = 35.4 bits (71), Expect(2) = 2e-039
Identities = 17/46 (36%), Positives = 26/46 (56%)
Frame = -3 / +1
Query: 154 SYSSDWGVQYYFQRNGVQIGQMAHSIWLYIVPSGMYGVVNYLKEKY 17
+Y+ D V +RNG+ IG+ +VPS M +V YLK++Y
Sbjct: 499 TYAGDALVTESAERNGILIGKPTPVANTCVVPSSMEKLVMYLKQRY 636
>gb|CW339175.1|CW339175 104_839_11485133_148_36135_019 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11485133, DNA
sequence
Length = 691
Score = 94.1 bits (199), Expect(3) = 2e-038
Identities = 36/65 (55%), Positives = 46/65 (70%)
Frame = -3 / -1
Query: 394 NSTEDQKAAQRARDFHIGWFLDPLINGQYPKIMQDIVKDRLPSFTPEQAKLVKGSSDYFG 215
+S D KA QR+ DF GWFLDP+++G+YP M + DRLP FT QAKL+KGS D+ G
Sbjct: 199 SSAADVKAVQRSLDFMYGWFLDPIVHGEYPGTMLGYLGDRLPRFTAAQAKLIKGSYDFIG 20
Query: 214 INQYT 200
+N YT
Sbjct: 19 VNYYT 5
Score = 68.4 bits (143), Expect(3) = 2e-038
Identities = 26/52 (50%), Positives = 36/52 (69%)
Frame = -3 / -1
Query: 541 NSSTEPYIVVHNILLSHATAVARYRNKYQATQKGKVGIVLDFNWYEPFTNST 386
+S+ EPY V HNI+L+HA AVA Y KY+ Q+G++GI + NWY P S+
Sbjct: 349 DSAREPYTVTHNIILAHAEAVALYNAKYKPAQRGQIGITVVSNWYVPTNASS 194
Score = 36.3 bits (73), Expect(3) = 2e-038
Identities = 15/42 (35%), Positives = 18/42 (42%)
Frame = -3 / -1
Query: 685 DYAXXXFKTXXXRVKXWXXLXEPRIVAXXGYDKGLXPPXXCT 560
D+A FK RVK W EP + GY G P C+
Sbjct: 505 DFAEVCFKEFGDRVKAWTTFNEPWTYSYQGYAVGKSAPGRCS 380
>gb|CW267997.1|CW267997 104_738_11401044_148_35300_040 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11401044, DNA
sequence
Length = 659
Score = 78.0 bits (164), Expect(3) = 7e-038
Identities = 28/40 (70%), Positives = 34/40 (85%)
Frame = -3 / -1
Query: 457 QATQKGKVGIVLDFNWYEPFTNSTEDQKAAQRARDFHIGW 338
Q QKG++GI+LDF WYEPF++S DQ AAQRARDFH+GW
Sbjct: 437 QLYQKGRIGILLDFVWYEPFSDSNADQAAAQRARDFHLGW 318
Score = 71.6 bits (150), Expect(3) = 7e-038
Identities = 27/41 (65%), Positives = 35/41 (85%)
Frame = -3 / -3
Query: 337 FLDPLINGQYPKIMQDIVKDRLPSFTPEQAKLVKGSSDYFG 215
FLDP+ING+YP MQ+IVKDRLP F+ E++++VKGS DY G
Sbjct: 123 FLDPIINGRYPYSMQEIVKDRLPLFSDEESRMVKGSIDYVG 1
Score = 49.6 bits (102), Expect(3) = 7e-038
Identities = 18/30 (60%), Positives = 23/30 (76%)
Frame = -3 / -3
Query: 532 TEPYIVVHNILLSHATAVARYRNKYQATQK 443
TEPY+ H+++LSHA AV RYR+KYQ K
Sbjct: 657 TEPYLAAHHLILSHAAAVRRYRDKYQVKCK 568
>gb|CW135560.1|CW135560 104_520_11117914_148_34833_043 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11117914, DNA
sequence
Length = 663
Score = 102 bits (217), Expect(2) = 8e-038
Identities = 40/71 (56%), Positives = 52/71 (73%)
Frame = -3 / -2
Query: 337 FLDPLINGQYPKIMQDIVKDRLPSFTPEQAKLVKGSSDYFGINQYTTYYIADQQTPPQGP 158
FLDP+ING+YP MQ+IVKDRLP F+ E++++VKGS DY GIN YT++Y+ D T P
Sbjct: 323 FLDPIINGRYPYSMQEIVKDRLPLFSDEESRMVKGSIDYVGINHYTSFYMKDPGTWNLTP 144
Query: 157 PSYSSDWGVQY 125
SY DW V +
Sbjct: 143 VSYQDDWHVGF 111
Score = 78.0 bits (164), Expect(2) = 8e-038
Identities = 28/40 (70%), Positives = 34/40 (85%)
Frame = -3 / -3
Query: 457 QATQKGKVGIVLDFNWYEPFTNSTEDQKAAQRARDFHIGW 338
Q QKG++GI+LDF WYEPF++S DQ AAQRARDFH+GW
Sbjct: 637 QLYQKGRIGILLDFVWYEPFSDSNADQAAAQRARDFHLGW 518
>gb|CW117040.1|CW117040 104_493_11107445_148_34610_031 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11107445, DNA
sequence
Length = 714
Score = 73.9 bits (155), Expect(4) = 2e-037
Identities = 29/55 (52%), Positives = 35/55 (63%)
Frame = -3 / -2
Query: 337 FLDPLINGQYPKIMQDIVKDRLPSFTPEQAKLVKGSSDYFGINQYTTYYIADQQT 173
F DP G YP +M+ V DRLP FT ++A LVKG+ D+ GIN YTTYY T
Sbjct: 185 FADPFFFGDYPALMRSRVGDRLPKFTADEAALVKGALDFVGINHYTTYYTKHNST 21
Score = 59.3 bits (123), Expect(4) = 2e-037
Identities = 20/39 (51%), Positives = 29/39 (74%)
Frame = -3 / -2
Query: 454 ATQKGKVGIVLDFNWYEPFTNSTEDQKAAQRARDFHIGW 338
ATQ G++GI D W+EP TN+T D +AA+R ++F +GW
Sbjct: 398 ATQNGELGIAFDVMWFEPMTNTTADIEAAKRGQEFQLGW 282
Score = 46.0 bits (94), Expect(4) = 2e-037
Identities = 17/31 (54%), Positives = 21/31 (67%)
Frame = -3 / -1
Query: 541 NSSTEPYIVVHNILLSHATAVARYRNKYQAT 449
NS TEPYIV HN +L+HAT YR Y+ +
Sbjct: 600 NSGTEPYIVAHNFILAHATVSDIYRRNYKVS 508
Score = 33.6 bits (67), Expect(4) = 2e-037
Identities = 12/28 (42%), Positives = 14/28 (50%)
Frame = -3 / -1
Query: 643 KXWXXLXEPRIVAXXGYDKGLXPPXXCT 560
K W L EP + GYD GL P C+
Sbjct: 714 KHWITLNEPHTLPIQGYDAGLQAPGRCS 631
>gb|BE595092.1|BE595092 PI1_45_E09.b1_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 497
Score = 155 bits (334), Expect = 5e-037
Identities = 59/114 (51%), Positives = 79/114 (69%)
Frame = -3 / +2
Query: 529 EPYIVVHNILLSHATAVARYRNKYQATQKGKVGIVLDFNWYEPFTNSTEDQKAAQRARDF 350
EPYI H+++L+HA+AV+ YR KYQA Q G++G+ L WYEP T + +D AA R DF
Sbjct: 11 EPYIAAHHLVLAHASAVSLYREKYQAEQGGRIGLTLLGWWYEPATETPDDIAAAARMNDF 190
Query: 349 HIGWFLDPLINGQYPKIMQDIVKDRLPSFTPEQAKLVKGSSDYFGINQYTTYYI 188
H+GWF+ P++ G YP +M+ V RLPSFT E+AK VKGS D+ G N Y Y+
Sbjct: 191 HVGWFMHPMVYGDYPPVMRKNVGSRLPSFTNEEAKRVKGSFDFVGFNHYVAVYV 352
>gb|BZ367054.1|BZ367054 id02b04.g1 WGS-SbicolorF (JM107 adapted methyl filtered) Sorghum
bicolor genomic clone id02b04 5', DNA sequence
Length = 617
Score = 126 bits (269), Expect(3) = 7e-037
Identities = 49/71 (69%), Positives = 59/71 (83%)
Frame = -3 / +3
Query: 337 FLDPLINGQYPKIMQDIVKDRLPSFTPEQAKLVKGSSDYFGINQYTTYYIADQQTPPQGP 158
F+DPLING YP+IMQD+VK+RLP FTPEQAKLVKGS+DY GIN+YT+ Y+ Q+ Q P
Sbjct: 162 FVDPLINGHYPQIMQDLVKERLPRFTPEQAKLVKGSADYIGINEYTSSYMKGQKLLQQTP 341
Query: 157 PSYSSDWGVQY 125
SYS+DW VQY
Sbjct: 342 SSYSADWQVQY 374
Score = 97.3 bits (206), Expect(2) = 9e-024
Identities = 48/71 (67%), Positives = 49/71 (69%)
Frame = +3 / -2
Query: 126 YWTPQSDE*LGGPCGGVC*SAM*YVVY*LIPK*SDEPLTSLACSGVKLGSRSFTMSCIIF 305
YWT QS E*L G C M* VY LIP *S EPLT+LACSGV LGS SFT SCII
Sbjct: 373 YWTCQSAE*LLGVCWSSFCPFM*LDVYSLIPM*SAEPLTNLACSGVNLGSLSFTRSCIIC 194
Query: 306 GYCPFINGSRN 338
G CPFINGS N
Sbjct: 193 G*CPFINGSTN 161
Score = 47.8 bits (98), Expect(3) = 7e-037
Identities = 18/23 (78%), Positives = 19/23 (82%)
Frame = -3 / +1
Query: 406 EPFTNSTEDQKAAQRARDFHIGW 338
E TNS +DQ AAQRARDFHIGW
Sbjct: 1 EALTNSPDDQAAAQRARDFHIGW 69
Score = 34.1 bits (68), Expect(2) = 9e-024
Identities = 13/23 (56%), Positives = 15/23 (65%)
Frame = +2 / -3
Query: 338 PTNMEVPGPLRCFLIFS*VCKRF 406
P N+EVP L C L+ *VCK F
Sbjct: 69 PANVEVPSSLGCCLVIR*VCKSF 1
Score = 21.7 bits (41), Expect(3) = 7e-037
Identities = 5/9 (55%), Positives = 7/9 (77%)
Frame = -2 / +2
Query: 113 EWRANWTDG 87
+W+ NWT G
Sbjct: 482 QWQTNWTKG 508
>gb|BE595073.1|BE595073 PI1_45_C11.b1_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 660
Score = 154 bits (330), Expect = 2e-036
Identities = 61/120 (50%), Positives = 81/120 (67%)
Frame = -3 / +1
Query: 541 NSSTEPYIVVHNILLSHATAVARYRNKYQATQKGKVGIVLDFNWYEPFTNSTEDQKAAQR 362
NSS EPYI HN+LL+HA+A YR KYQA QKG VGI + W P TNST D +A+QR
Sbjct: 85 NSSVEPYIAAHNMLLAHASATRLYREKYQAVQKGVVGINIYTMWAYPLTNSTADLEASQR 264
Query: 361 ARDFHIGWFLDPLINGQYPKIMQDIVKDRLPSFTPEQAKLVKGSSDYFGINQYTTYYIAD 182
DF+ GW L+PL+ G YP +++ V RLPSF Q++ ++G+ D+ GIN Y + Y+ D
Sbjct: 265 FLDFYCGWILEPLVFGDYPSVVKKNVGSRLPSFRKVQSEAIRGTIDFIGINHYLSVYVND 444
>gb|CL177641.1|CL177641 104_385_10893973_116_31914_037 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10893973, DNA
sequence
Length = 563
Score = 105 bits (224), Expect(2) = 2e-036
Identities = 46/100 (46%), Positives = 59/100 (59%)
Frame = -3 / +1
Query: 394 NSTEDQKAAQRARDFHIGWFLDPLINGQYPKIMQDIVKDRLPSFTPEQAKLVKGSSDYFG 215
+S D KA QR+ DF GWFLDP+++G+YP M + DRLP FT QAKL+KGS + G
Sbjct: 163 SSAADVKAVQRSLDFMYGWFLDPIVHGEYPGTMLGYLGDRLPRFTAAQAKLIKGSYYFIG 342
Query: 214 INQYTTYYIADQQTPPQGPPSYSSDWGVQYYFQRNGVQIG 95
+N YT Y+ A P SY+ D R+GV IG
Sbjct: 343 VNYYTAYFAAA*PAPNGKEQSYNRDIRANTSGYRDGVPIG 462
Score = 68.4 bits (143), Expect(2) = 2e-036
Identities = 26/52 (50%), Positives = 36/52 (69%)
Frame = -3 / +1
Query: 541 NSSTEPYIVVHNILLSHATAVARYRNKYQATQKGKVGIVLDFNWYEPFTNST 386
+S+ EPY V HNI+L+HA AVA Y KY+ Q+G++GI + NWY P S+
Sbjct: 13 DSAREPYTVTHNIILAHAEAVALYNAKYKPAQRGQIGITVVSNWYVPTNASS 168
>gb|CW053211.1|CW053211 104_293_10515837_114_30184 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10515837, DNA
sequence
Length = 664
Score = 110 bits (235), Expect(2) = 3e-034
Identities = 44/64 (68%), Positives = 46/64 (71%)
Frame = -3 / +3
Query: 646 VKXWXXLXEPRIVAXXGYDKGLXPPXXCTQCTAXXNSSTEPYIVVHNILLSHATAVARYR 467
VK W EPRIVA GYD G PP CT+C A NS+TEPYIV HN LLSHA AVARYR
Sbjct: 18 VKHWFTFNEPRIVALLGYDGGSIPPQRCTKCAAGGNSATEPYIVAHNFLLSHAAAVARYR 197
Query: 466 NKYQ 455
NKYQ
Sbjct: 198 NKYQ 209
Score = 81.3 bits (171), Expect(2) = 1e-023
Identities = 40/63 (63%), Positives = 43/63 (68%)
Frame = +3 / -1
Query: 459 YLLRYLATAVA*DRRML*TTM*GSVDEFXXAVHCVHXXGGXSPLS*PXNATILGSXNXXQ 638
YLLRYLATA A D+R L* T+*GSV EF A H VH GG P S*P +ATILGS N Q
Sbjct: 205 YLLRYLATAAACDKRKL*ATI*GSVAEFPPAAHLVHL*GGIDPPS*PSSATILGSLNVNQ 26
Query: 639 XLT 647
T
Sbjct: 25 CFT 17
Score = 57.9 bits (120), Expect(2) = 3e-034
Identities = 22/24 (91%), Positives = 22/24 (91%)
Frame = -3 / +2
Query: 454 ATQKGKVGIVLDFNWYEPFTNSTE 383
A QKGKVGIVLDFNWYEP TNSTE
Sbjct: 593 AAQKGKVGIVLDFNWYEPLTNSTE 664
Score = 51.5 bits (106), Expect(2) = 1e-023
Identities = 21/25 (84%), Positives = 23/25 (92%)
Frame = +3 / -2
Query: 384 SVEFVKGSYQLKSRTIPTLPF*VAW 458
SVEFV+GSYQLKSRTIPT PF* A+
Sbjct: 663 SVEFVRGSYQLKSRTIPTFPF*AAY 589
>gb|CW249974.1|CW249974 104_712_11223133_148_35054_063 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11223133, DNA
sequence
Length = 691
Score = 74.4 bits (156), Expect(3) = 3e-034
Identities = 29/50 (58%), Positives = 35/50 (70%)
Frame = -3 / +2
Query: 337 FLDPLINGQYPKIMQDIVKDRLPSFTPEQAKLVKGSSDYFGINQYTTYYI 188
F DP G YP+IM+ V RLP FT E+A LVKGS D+ GIN YTT+Y+
Sbjct: 542 FADPFFFGDYPEIMRSRVGKRLPKFTAEEAALVKGSLDFMGINHYTTFYV 691
Score = 62.0 bits (129), Expect(3) = 3e-034
Identities = 22/40 (55%), Positives = 30/40 (75%)
Frame = -3 / +2
Query: 457 QATQKGKVGIVLDFNWYEPFTNSTEDQKAAQRARDFHIGW 338
QATQ G++GI D WYEP +NST D +A +RA++F +GW
Sbjct: 281 QATQNGQLGISFDVIWYEPMSNSTADVEATKRAQEFQLGW 400
Score = 50.6 bits (104), Expect(3) = 3e-034
Identities = 19/29 (65%), Positives = 22/29 (75%)
Frame = -3 / +2
Query: 541 NSSTEPYIVVHNILLSHATAVARYRNKYQ 455
NS TEPYIV HNI+L+HAT Y NKY+
Sbjct: 20 NSGTEPYIVAHNIILAHATVADIYMNKYK 106
>gb|CL156685.1|CL156685 104_343_10783033_114_31475_361 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10783033, DNA
sequence
Length = 682
Score = 101 bits (216), Expect(3) = 1e-033
Identities = 38/68 (55%), Positives = 51/68 (75%)
Frame = -3 / -2
Query: 541 NSSTEPYIVVHNILLSHATAVARYRNKYQATQKGKVGIVLDFNWYEPFTNSTEDQKAAQR 362
NS+TEPY+V H++LL+HA+AV+ YR KYQ Q G++G+ L WYEP T+ ED +AA R
Sbjct: 582 NSTTEPYVVAHHLLLAHASAVSLYRRKYQGEQGGRIGLTLLAYWYEPATHKPEDVQAAAR 403
Query: 361 ARDFHIGW 338
A DF +GW
Sbjct: 402 ANDFTLGW 379
Score = 56.5 bits (117), Expect(3) = 1e-033
Identities = 20/45 (44%), Positives = 31/45 (68%)
Frame = -3 / -1
Query: 337 FLDPLINGQYPKIMQDIVKDRLPSFTPEQAKLVKGSSDYFGINQY 203
F+ PL++G YP +M+ RLP T +++ +V+GS D+ GINQY
Sbjct: 199 FMHPLVHGDYPPVMRRNAGSRLPVLTAQESAMVRGSFDFVGINQY 65
Score = 26.7 bits (52), Expect(3) = 1e-033
Identities = 9/20 (45%), Positives = 11/20 (55%)
Frame = -3 / -2
Query: 619 PRIVAXXGYDKGLXPPXXCT 560
P I GYD+G PP C+
Sbjct: 681 PNIEPLGGYDQGYLPPRRCS 622
>gb|CW053338.1|CW053338 104_293_10515908_114_30185 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10515908, DNA
sequence
Length = 660
Score = 110 bits (235), Expect(2) = 7e-033
Identities = 44/64 (68%), Positives = 46/64 (71%)
Frame = -3 / +3
Query: 646 VKXWXXLXEPRIVAXXGYDKGLXPPXXCTQCTAXXNSSTEPYIVVHNILLSHATAVARYR 467
VK W EPRIVA GYD G PP CT+C A NS+TEPYIV HN LLSHA AVARYR
Sbjct: 18 VKHWFTFNEPRIVALLGYDGGSIPPQRCTKCAAGGNSATEPYIVAHNFLLSHAAAVARYR 197
Query: 466 NKYQ 455
NKYQ
Sbjct: 198 NKYQ 209
Score = 81.3 bits (171), Expect(2) = 4e-023
Identities = 40/63 (63%), Positives = 43/63 (68%)
Frame = +3 / -3
Query: 459 YLLRYLATAVA*DRRML*TTM*GSVDEFXXAVHCVHXXGGXSPLS*PXNATILGSXNXXQ 638
YLLRYLATA A D+R L* T+*GSV EF A H VH GG P S*P +ATILGS N Q
Sbjct: 205 YLLRYLATAAACDKRKL*ATI*GSVAEFPPAAHLVHL*GGIDPPS*PSSATILGSLNVNQ 26
Query: 639 XLT 647
T
Sbjct: 25 CFT 17
Score = 53.3 bits (110), Expect(2) = 7e-033
Identities = 20/22 (90%), Positives = 20/22 (90%)
Frame = -3 / +2
Query: 454 ATQKGKVGIVLDFNWYEPFTNS 389
A QKGKVGIVLDFNWYEP TNS
Sbjct: 593 AAQKGKVGIVLDFNWYEPLTNS 658
Score = 49.6 bits (102), Expect(2) = 4e-023
Identities = 20/24 (83%), Positives = 22/24 (91%)
Frame = +3 / -1
Query: 387 VEFVKGSYQLKSRTIPTLPF*VAW 458
VEFV+GSYQLKSRTIPT PF* A+
Sbjct: 660 VEFVRGSYQLKSRTIPTFPF*AAY 589
>gb|CN124070.1|CN124070 RHOH1_2_A09.g1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_2_A09_A002 5', mRNA sequence
Length = 626
Score = 134 bits (288), Expect = 1e-030
Identities = 51/118 (43%), Positives = 75/118 (63%)
Frame = -3 / +3
Query: 523 YIVVHNILLSHATAVARYRNKYQATQKGKVGIVLDFNWYEPFTNSTEDQKAAQRARDFHI 344
Y+ H+ +L+HA AV YR K++A Q G+VG V+D W EPF+ EDQ AAQR DF +
Sbjct: 231 YLAAHHQILAHAAAVDVYRRKFKAAQGGEVGFVVDCEWAEPFSEKAEDQIAAQRRIDFQL 410
Query: 343 GWFLDPLINGQYPKIMQDIVKDRLPSFTPEQAKLVKGSSDYFGINQYTTYYIADQQTP 170
GW+LDP+ G YP+ M+ + LP+F+ + + ++ D+ G+N YT+ IA Q P
Sbjct: 411 GWYLDPIYFGDYPESMRQRLGSDLPTFSEKDKEFIRNKIDFIGLNHYTSRLIAHHQNP 584
>gb|AW923117.1|AW923117 DG1_49_C11.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 421
Score = 134 bits (287), Expect = 1e-030
Identities = 50/94 (53%), Positives = 65/94 (69%)
Frame = -3 / +2
Query: 541 NSSTEPYIVVHNILLSHATAVARYRNKYQATQKGKVGIVLDFNWYEPFTNSTEDQKAAQR 362
NS EPY+ HNI++SHA AV Y+ YQA Q G +GIV WYEP TN+TED AA+R
Sbjct: 137 NSHREPYVAAHNIIMSHAAAVRNYKESYQAKQGGSIGIVTAMKWYEPLTNTTEDILAARR 316
Query: 361 ARDFHIGWFLDPLINGQYPKIMQDIVKDRLPSFT 260
A+ F WFLDP+ G YP+ M++I++ LP+FT
Sbjct: 317 AQPFETEWFLDPIFFGDYPRAMREILQSNLPTFT 418
>gb|CW360617.1|CW360617 fsbb001f028m16k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f028m16, DNA
sequence
Length = 637
Score = 96.8 bits (205), Expect(2) = 9e-030
Identities = 36/65 (55%), Positives = 48/65 (73%)
Frame = -3 / +2
Query: 532 TEPYIVVHNILLSHATAVARYRNKYQATQKGKVGIVLDFNWYEPFTNSTEDQKAAQRARD 353
TEPY+V H++LL+HA+AV+ YR KYQ Q G++G+ L WYEP T+ ED +AA RA D
Sbjct: 20 TEPYVVAHHLLLAHASAVSLYRRKYQGEQGGRIGLTLLAYWYEPATHKPEDVQAAARAND 199
Query: 352 FHIGW 338
F +GW
Sbjct: 200 FTLGW 214
Score = 56.5 bits (117), Expect(2) = 9e-030
Identities = 20/45 (44%), Positives = 31/45 (68%)
Frame = -3 / +1
Query: 337 FLDPLINGQYPKIMQDIVKDRLPSFTPEQAKLVKGSSDYFGINQY 203
F+ PL++G YP +M+ RLP T +++ +V+GS D+ GINQY
Sbjct: 394 FMHPLVHGDYPPVMRRNAGSRLPVLTAQESAMVRGSFDFVGINQY 528
>gb|CW339174.1|CW339174 104_839_11485133_116_36134_019 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11485133, DNA
sequence
Length = 649
Score = 68.4 bits (143), Expect(3) = 2e-029
Identities = 26/52 (50%), Positives = 36/52 (69%)
Frame = -3 / +1
Query: 541 NSSTEPYIVVHNILLSHATAVARYRNKYQATQKGKVGIVLDFNWYEPFTNST 386
+S+ EPY V HNI+L+HA AVA Y KY+ Q+G++GI + NWY P S+
Sbjct: 358 DSAREPYTVTHNIILAHAEAVALYNAKYKPAQRGQIGITVVSNWYVPTNASS 513
Score = 63.4 bits (132), Expect(3) = 2e-029
Identities = 24/45 (53%), Positives = 31/45 (68%)
Frame = -3 / +1
Query: 394 NSTEDQKAAQRARDFHIGWFLDPLINGQYPKIMQDIVKDRLPSFT 260
+S D KA QR+ DF GWFLDP+++G+YP M + DRLP FT
Sbjct: 508 SSAADVKAVQRSLDFMYGWFLDPIVHGEYPGTMLGYLGDRLPRFT 642
Score = 36.3 bits (73), Expect(3) = 2e-029
Identities = 15/42 (35%), Positives = 18/42 (42%)
Frame = -3 / +1
Query: 685 DYAXXXFKTXXXRVKXWXXLXEPRIVAXXGYDKGLXPPXXCT 560
D+A FK RVK W EP + GY G P C+
Sbjct: 202 DFAEVCFKEFGDRVKAWTTFNEPWTYSYQGYAVGKSAPGRCS 327
>gb|CL156686.1|CL156686 104_343_10783033_116_31476_361 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10783033, DNA
sequence
Length = 712
Score = 101 bits (216), Expect(2) = 1e-028
Identities = 38/68 (55%), Positives = 51/68 (75%)
Frame = -3 / +1
Query: 541 NSSTEPYIVVHNILLSHATAVARYRNKYQATQKGKVGIVLDFNWYEPFTNSTEDQKAAQR 362
NS+TEPY+V H++LL+HA+AV+ YR KYQ Q G++G+ L WYEP T+ ED +AA R
Sbjct: 454 NSTTEPYVVAHHLLLAHASAVSLYRRKYQGEQGGRIGLTLLAYWYEPATHKPEDVQAAAR 633
Query: 361 ARDFHIGW 338
A DF +GW
Sbjct: 634 ANDFTLGW 657
Score = 45.5 bits (93), Expect(2) = 1e-028
Identities = 17/41 (41%), Positives = 22/41 (53%)
Frame = -3 / +1
Query: 682 YAXXXFKTXXXRVKXWXXLXEPRIVAXXGYDKGLXPPXXCT 560
YA F++ RVK W + EP I GYD+G PP C+
Sbjct: 292 YADVCFRSFGDRVKHWITVNEPNIEPLGGYDQGYLPPRRCS 414
>gb|CW123120.1|CW123120 104_502_11111040_148_34686_092 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11111040, DNA
sequence
Length = 616
Score = 73.9 bits (155), Expect(3) = 4e-028
Identities = 29/55 (52%), Positives = 35/55 (63%)
Frame = -3 / +2
Query: 337 FLDPLINGQYPKIMQDIVKDRLPSFTPEQAKLVKGSSDYFGINQYTTYYIADQQT 173
F DP G YP +M+ V DRLP FT ++A LVKG+ D+ GIN YTTYY T
Sbjct: 395 FADPFFFGDYPALMRSRVGDRLPKFTADEAALVKGALDFVGINHYTTYYTKHNST 559
Score = 59.3 bits (123), Expect(3) = 4e-028
Identities = 20/39 (51%), Positives = 29/39 (74%)
Frame = -3 / +2
Query: 454 ATQKGKVGIVLDFNWYEPFTNSTEDQKAAQRARDFHIGW 338
ATQ G++GI D W+EP TN+T D +AA+R ++F +GW
Sbjct: 182 ATQNGELGIAFDVMWFEPMTNTTADIEAAKRGQEFQLGW 298
Score = 30.4 bits (60), Expect(3) = 4e-028
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = -3 / +1
Query: 520 IVVHNILLSHATAVARYRNKYQAT 449
IV HN +L+HAT YR Y+ +
Sbjct: 1 IVAHNFILAHATVSDIYRRNYKVS 72
>gb|BM323664.1|BM323664 PIC1_21_H06.b1_A002 Pathogen-infected compatible 1 (PIC1) Sorghum
bicolor cDNA, mRNA sequence
Length = 548
Score = 109 bits (233), Expect(2) = 5e-028
Identities = 41/85 (48%), Positives = 56/85 (65%)
Frame = -3 / +2
Query: 550 AXXNSSTEPYIVVHNILLSHATAVARYRNKYQATQKGKVGIVLDFNWYEPFTNSTEDQKA 371
A NS EPY+ HN++LSHATAV Y+ KYQ QKG +GIV+ W+ P T++ D+ A
Sbjct: 293 AQGNSDAEPYVATHNVVLSHATAVEIYKRKYQRKQKGMIGIVMAAFWFVPLTDTPVDRMA 472
Query: 370 AQRARDFHIGWFLDPLINGQYPKIM 296
+RA F + W+LDP++ G YP M
Sbjct: 473 TERALAFSVPWYLDPIVYGDYPPEM 547
Score = 35.9 bits (72), Expect(2) = 5e-028
Identities = 13/36 (36%), Positives = 15/36 (41%)
Frame = -3 / +2
Query: 667 FKTXXXRVKXWXXLXEPRIVAXXGYDKGLXPPXXCT 560
F RVK W EP + GY G PP C+
Sbjct: 167 FAAFGDRVKHWATFNEPNVAMTKGYMLGTYPPGRCS 274
>gb|CW197002.1|CW197002 104_621_11181460_116_36820_012 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11181460, DNA
sequence
Length = 792
Score = 80.3 bits (169), Expect(3) = 7e-028
Identities = 32/66 (48%), Positives = 44/66 (66%)
Frame = -3 / -3
Query: 337 FLDPLINGQYPKIMQDIVKDRLPSFTPEQAKLVKGSSDYFGINQYTTYYIADQQTPPQGP 158
F+DPL+ G YP M+ +V +RLP FT EQ+KL+KG+ D+ G+N YTTYY A G
Sbjct: 259 FMDPLVGGDYPLSMRRLVGNRLPRFTKEQSKLLKGAFDFIGLNYYTTYYAASLPPSSNGL 80
Query: 157 PSYSSD 140
S ++D
Sbjct: 79 YSSNTD 62
Score = 46.9 bits (96), Expect(3) = 7e-028
Identities = 17/40 (42%), Positives = 25/40 (62%)
Frame = -3 / -2
Query: 457 QATQKGKVGIVLDFNWYEPFTNSTEDQKAAQRARDFHIGW 338
QA Q+GK+G+ L W+ P + S ++ A RA DF +GW
Sbjct: 488 QAVQRGKIGVTLVSLWFLPLSPSKSNEDAVTRALDFMLGW 369
Score = 38.6 bits (78), Expect(3) = 7e-028
Identities = 15/29 (51%), Positives = 19/29 (65%)
Frame = -3 / -3
Query: 541 NSSTEPYIVVHNILLSHATAVARYRNKYQ 455
+S EPY V H+ LL+H AV Y+ KYQ
Sbjct: 766 DSGREPYTVCHHQLLAHGEAVRLYKEKYQ 680
>gb|BM323743.1|BM323743 PIC1_22_G06.b1_A002 Pathogen-infected compatible 1 (PIC1) Sorghum
bicolor cDNA, mRNA sequence
Length = 515
Score = 111 bits (236), Expect(2) = 3e-027
Identities = 47/86 (54%), Positives = 58/86 (67%)
Frame = -3 / +1
Query: 541 NSSTEPYIVVHNILLSHATAVARYRNKYQATQKGKVGIVLDFNWYEPFTNSTEDQKAAQR 362
NS+TEPYI HN++LSHA AV+ YR +YQ Q G +GI + WYEPF N+T D A +R
Sbjct: 253 NSTTEPYIAGHNMILSHANAVSVYRKRYQEKQGGHIGISICAIWYEPFGNTTADILAVER 432
Query: 361 ARDFHIGWFLDPLINGQYPKIMQDIV 284
A F WFLDPLI G YP M+ I+
Sbjct: 433 ALSFGGPWFLDPLILGDYPIEMRKIL 510
Score = 32.2 bits (64), Expect(2) = 3e-027
Identities = 13/42 (30%), Positives = 17/42 (40%)
Frame = -3 / +1
Query: 682 YAXXXFKTXXXRVKXWXXLXEPRIVAXXGYDKGLXPPXXCTQ 557
+A FK RVK W + + Y G PP C+Q
Sbjct: 103 FAEVCFKMFGDRVKFWITFNQANLSLKFSYMDGWYPPSRCSQ 228
>gb|CW148187.1|CW148187 104_542_11140281_116_35000_035 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11140281, DNA
sequence
Length = 669
Score = 115 bits (245), Expect(2) = 5e-027
Identities = 50/126 (39%), Positives = 69/126 (54%)
Frame = -3 / -1
Query: 394 NSTEDQKAAQRARDFHIGWFLDPLINGQYPKIMQDIVKDRLPSFTPEQAKLVKGSSDYFG 215
+S D KA QR+ DF GWFLDP+++G+YP M + DRLP FT QAKL+KGS D+ G
Sbjct: 612 SSAADVKAVQRSLDFMYGWFLDPIVHGEYPGTMLGYLGDRLPRFTAAQAKLIKGSYDFIG 433
Query: 214 INQYTTYYIADQQTPPQGPPSYSSDWGVQYYFQRNGVQIGQMAHSIWLYIVPSGMYGVVN 35
+N YT Y+ + + P SY D R+GV IG + P G+ ++
Sbjct: 432 VNYYTAYFASAKPAPNGMEQSYDGDIRANTSGYRDGVPIGTPEFVPIFFEYPQGLRELLL 253
Query: 34 YLKEKY 17
Y +Y
Sbjct: 252 YTSRRY 235
Score = 27.2 bits (53), Expect(2) = 5e-027
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = -3 / -1
Query: 448 QKGKVGIVLDFNWYEPFTNST 386
Q+G++GI + NWY P S+
Sbjct: 669 QRGQIGITVVSNWYVPTNASS 607
>gb|CW400817.1|CW400817 fsbb001f091f04f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f091f04, DNA
sequence
Length = 738
Score = 77.1 bits (162), Expect(3) = 6e-027
Identities = 28/49 (57%), Positives = 38/49 (77%)
Frame = -3 / +1
Query: 337 FLDPLINGQYPKIMQDIVKDRLPSFTPEQAKLVKGSSDYFGINQYTTYY 191
F+DPL+ G YP M+ +V +RLP FT EQ+KL+KG+ D+ G+N YTTYY
Sbjct: 589 FMDPLVGGDYPLSMRRLVGNRLPRFTKEQSKLLKGAFDFIGLNYYTTYY 735
Score = 46.9 bits (96), Expect(3) = 6e-027
Identities = 17/40 (42%), Positives = 25/40 (62%)
Frame = -3 / +3
Query: 457 QATQKGKVGIVLDFNWYEPFTNSTEDQKAAQRARDFHIGW 338
QA Q+GK+G+ L W+ P + S ++ A RA DF +GW
Sbjct: 360 QAVQRGKIGVTLVSLWFLPLSPSKSNEDAVTRALDFMLGW 479
Score = 38.6 bits (78), Expect(3) = 6e-027
Identities = 15/29 (51%), Positives = 19/29 (65%)
Frame = -3 / +1
Query: 541 NSSTEPYIVVHNILLSHATAVARYRNKYQ 455
+S EPY V H+ LL+H AV Y+ KYQ
Sbjct: 82 DSGREPYTVCHHQLLAHGEAVRLYKEKYQ 168
>gb|AF253508.1|AF253508 Sorghum bicolor cyanogenic beta-glucosidase dhurrinase-2 mRNA,
complete cds
Length = 1935
Score = 94.5 bits (200), Expect(3) = 1e-026
Identities = 33/92 (35%), Positives = 61/92 (66%)
Frame = -3 / +2
Query: 466 NKYQATQKGKVGIVLDFNWYEPFTNSTEDQKAAQRARDFHIGWFLDPLINGQYPKIMQDI 287
NK+ +KG++G+ L+ P+ ++ D++A +R D+++GW+L+P++ G YP M+
Sbjct: 926 NKFHRGEKGRIGLALNVMGTVPYGSTFLDEQAHERCMDYNLGWYLEPVVRGDYPHSMRSS 1105
Query: 286 VKDRLPSFTPEQAKLVKGSSDYFGINQYTTYY 191
V+DRLP FT ++ + + GS D GIN Y++ +
Sbjct: 1106 VRDRLPHFTEKEQQKLVGSYDMIGINYYSSRF 1201
Score = 32.7 bits (65), Expect(3) = 1e-026
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = -3 / +2
Query: 541 NSSTEPYIVVHNILLSHATAVARY 470
+S EPY+V HN LL+HA V Y
Sbjct: 854 DSIREPYLVGHNFLLAHAETVDLY 925
Score = 31.8 bits (63), Expect(3) = 1e-026
Identities = 10/32 (31%), Positives = 19/32 (59%)
Frame = -3 / +2
Query: 112 NGVQIGQMAHSIWLYIVPSGMYGVVNYLKEKY 17
NG IG + W+Y+ P G+ ++ +K++Y
Sbjct: 1286 NGNTIGPATGNAWVYMYPKGLKDILMIMKKRY 1381
>gb|CN143668.1|CN143668 WOUND1_17_D11.g1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_17_D11_A002 5', mRNA sequence
Length = 776
Score = 94.5 bits (200), Expect(3) = 1e-026
Identities = 33/92 (35%), Positives = 61/92 (66%)
Frame = -3 / +3
Query: 466 NKYQATQKGKVGIVLDFNWYEPFTNSTEDQKAAQRARDFHIGWFLDPLINGQYPKIMQDI 287
NK+ +KG++G+ L+ P+ ++ D++A +R D+++GW+L+P++ G YP M+
Sbjct: 141 NKFHRGEKGRIGLALNVMGTVPYGSTFLDEQAHERCMDYNLGWYLEPVVRGDYPHSMRSS 320
Query: 286 VKDRLPSFTPEQAKLVKGSSDYFGINQYTTYY 191
V+DRLP FT ++ + + GS D GIN Y++ +
Sbjct: 321 VRDRLPHFTEKEQQKLVGSYDMIGINYYSSRF 416
Score = 33.6 bits (67), Expect(3) = 1e-026
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = -3 / +3
Query: 541 NSSTEPYIVVHNILLSHATAVARY 470
+S EPY+V HN+LL+HA V Y
Sbjct: 69 DSIREPYLVGHNLLLAHAETVDLY 140
Score = 30.4 bits (60), Expect(3) = 1e-026
Identities = 10/32 (31%), Positives = 18/32 (56%)
Frame = -3 / +3
Query: 112 NGVQIGQMAHSIWLYIVPSGMYGVVNYLKEKY 17
NG IG + W+Y+ P G+ ++ K++Y
Sbjct: 501 NGNTIGPATGNAWVYMYPKGLKDILMITKKRY 596
>gb|CW188764.1|CW188764 104_608_11173219_116_36729_068 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11173219, DNA
sequence
Length = 632
Score = 120 bits (257), Expect = 2e-026
Identities = 49/77 (63%), Positives = 52/77 (67%)
Frame = -3 / -1
Query: 685 DYAXXXFKTXXXRVKXWXXLXEPRIVAXXGYDKGLXPPXXCTQCTAXXNSSTEPYIVVHN 506
DYA FK+ VK W EPRIVA GYD G PP CT+C A NS+TEPYIV HN
Sbjct: 629 DYADFCFKSLGDHVKHWFTFNEPRIVALLGYDGGSIPPQRCTKCAAGGNSATEPYIVAHN 450
Query: 505 ILLSHATAVARYRNKYQ 455
LLSHA AVARYRNKYQ
Sbjct: 449 FLLSHAAAVARYRNKYQ 399
>gb|CW439638.1|CW439638 fsbb001f157o06f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f157o06, DNA
sequence
Length = 776
Score = 59.3 bits (123), Expect(3) = 3e-026
Identities = 20/52 (38%), Positives = 34/52 (65%)
Frame = -3 / +3
Query: 337 FLDPLINGQYPKIMQDIVKDRLPSFTPEQAKLVKGSSDYFGINQYTTYYIAD 182
+LDP++ G YP M+ ++ +LP+F+P + + + D+ GIN YTT Y+ D
Sbjct: 486 YLDPIVYGDYPPEMRQLLGSKLPTFSPVEKRKLGYKLDFIGINHYTTLYVKD 641
Score = 51.9 bits (107), Expect(3) = 3e-026
Identities = 19/32 (59%), Positives = 23/32 (71%)
Frame = -3 / +1
Query: 550 AXXNSSTEPYIVVHNILLSHATAVARYRNKYQ 455
A NS EPY+ HN++LSHATAV Y+ KYQ
Sbjct: 55 AQGNSDAEPYVATHNVVLSHATAVEIYKRKYQ 150
Score = 46.0 bits (94), Expect(3) = 3e-026
Identities = 17/42 (40%), Positives = 26/42 (61%)
Frame = -3 / +3
Query: 457 QATQKGKVGIVLDFNWYEPFTNSTEDQKAAQRARDFHIGWFL 332
Q QKG +GIV+ W+ P T++ D+ A +RA F + W+L
Sbjct: 255 QRKQKGMIGIVMAAFWFVPLTDTPVDRMATERALAFSVPWYL 380
>gb|CL167735.1|CL167735 104_364_10810290_114_31802_354 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10810290, DNA
sequence
Length = 732
Score = 102 bits (217), Expect(2) = 3e-026
Identities = 40/71 (56%), Positives = 52/71 (73%)
Frame = -3 / -3
Query: 337 FLDPLINGQYPKIMQDIVKDRLPSFTPEQAKLVKGSSDYFGINQYTTYYIADQQTPPQGP 158
FLDP+ING+YP MQ+IVKDRLP F+ E++++VKGS DY GIN YT++Y+ D T P
Sbjct: 553 FLDPIINGRYPYSMQEIVKDRLPLFSDEESRMVKGSIDYVGINHYTSFYMKDPGTWNLTP 374
Query: 157 PSYSSDWGVQY 125
SY DW V +
Sbjct: 373 VSYQDDWHVGF 341
Score = 39.1 bits (79), Expect(2) = 3e-026
Identities = 15/24 (62%), Positives = 18/24 (75%)
Frame = -3 / -3
Query: 88 AHSIWLYIVPSGMYGVVNYLKEKY 17
A+S WLYIVP G+ VNY+KE Y
Sbjct: 88 ANSYWLYIVPWGINKAVNYVKETY 17
>gb|CW164218.1|CW164218 104_572_11151871_116_36465_030 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11151871, DNA
sequence
Length = 758
Score = 119 bits (254), Expect = 5e-026
Identities = 48/80 (60%), Positives = 52/80 (65%)
Frame = -3 / -2
Query: 694 IXXDYAXXXFKTXXXRVKXWXXLXEPRIVAXXGYDKGLXPPXXCTQCTAXXNSSTEPYIV 515
+ DYA FKT RVK W EPRI A GYD G PP CT+C A NS+TEPYIV
Sbjct: 349 LFTDYADFCFKTYGDRVKHWFTFNEPRIAALLGYDVGSNPPQRCTKCAAGGNSATEPYIV 170
Query: 514 VHNILLSHATAVARYRNKYQ 455
HN LL+HA AVARYR KYQ
Sbjct: 169 AHNFLLAHAAAVARYRTKYQ 110
>gb|CW128995.1|CW128995 104_510_11114318_148_34753_049 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11114318, DNA
sequence
Length = 627
Score = 78.5 bits (165), Expect(2) = 6e-026
Identities = 31/90 (34%), Positives = 54/90 (60%)
Frame = -3 / -1
Query: 334 LDPLINGQYPKIMQDIVKDRLPSFTPEQAKLVKGSSDYFGINQYTTYYIADQQTPPQGPP 155
++PL+ G YP++M+ I+ RLP FT EQ+++++G++D+ GIN YT+ Y++D+
Sbjct: 309 VNPLVFGDYPEVMKRIIGSRLPRFTKEQSEMIRGTADFIGINHYTSVYVSDRSNAEDTTG 130
Query: 154 SYSSDWGVQYYFQRNGVQIGQMAHSIWLYI 65
+ V F+ N I Q+ H I+ I
Sbjct: 129 PRDYNTDVAATFRCNFCPINQLLHYIFQII 40
Score = 62.0 bits (129), Expect(2) = 6e-026
Identities = 26/52 (50%), Positives = 32/52 (61%)
Frame = -3 / -2
Query: 493 HATAVARYRNKYQATQKGKVGIVLDFNWYEPFTNSTEDQKAAQRARDFHIGW 338
HA A YR KYQATQ G VG+ + W PF+++ D A QR+ DF IGW
Sbjct: 626 HAAAARLYREKYQATQNGVVGMNVYSFWNYPFSSAPADVAATQRSLDFMIGW 471
>gb|BI076057.1|BI076057 IP1_24_G09.b1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 547
Score = 89.0 bits (188), Expect(2) = 6e-026
Identities = 35/66 (53%), Positives = 45/66 (68%)
Frame = -3 / +1
Query: 538 SSTEPYIVVHNILLSHATAVARYRNKYQATQKGKVGIVLDFNWYEPFTNSTEDQKAAQRA 359
SSTEPY+V HNILL+HA A Y+ ++ Q G +GI LD WYEP ++ ED +AA RA
Sbjct: 79 SSTEPYVVAHNILLAHAGAFHSYKQHFKKDQGGIIGIALDSKWYEPLSDVDEDTEAAARA 258
Query: 358 RDFHIG 341
DF +G
Sbjct: 259 MDFELG 276
Score = 49.6 bits (102), Expect(2) = 6e-026
Identities = 18/35 (51%), Positives = 25/35 (71%)
Frame = -3 / +3
Query: 280 DRLPSFTPEQAKLVKGSSDYFGINQYTTYYIADQQ 176
DRLP F+ + +KLV GS D+ GIN YTT Y+ + +
Sbjct: 291 DRLPKFSTQASKLVSGSLDFVGINHYTTLYVRNDR 395
>gb|CW437081.1|CW437081 fsbb001f154a08k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f154a08, DNA
sequence
Length = 761
Score = 78.5 bits (165), Expect(2) = 7e-026
Identities = 31/59 (52%), Positives = 39/59 (66%)
Frame = -3 / +3
Query: 337 FLDPLINGQYPKIMQDIVKDRLPSFTPEQAKLVKGSSDYFGINQYTTYYIADQQTPPQG 161
F DP G YP+IM+ V RLP FT E+A LVKGS D+ GIN YTT+Y+ D ++ G
Sbjct: 414 FADPFFFGDYPEIMRSRVGKRLPKFTAEEAALVKGSLDFMGINHYTTFYVQDDESSVVG 590
Score = 62.0 bits (129), Expect(2) = 7e-026
Identities = 22/40 (55%), Positives = 30/40 (75%)
Frame = -3 / +3
Query: 457 QATQKGKVGIVLDFNWYEPFTNSTEDQKAAQRARDFHIGW 338
QATQ G++GI D WYEP +NST D +A +RA++F +GW
Sbjct: 153 QATQNGQLGISFDVIWYEPMSNSTADVEATKRAQEFQLGW 272
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 801,644,538
Number of Sequences: 832831
Number of extensions: 11436401
Number of successful extensions: 68567
Number of sequences better than 1.0e-020: 94
length of database: 163,786,556
effective HSP length: 54
effective length of database: 118,813,682
effective search space used: 21030021714
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)