TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= L20621.2.1
(1220 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CW033844.1|CW033844 104_263_10502188_114_30359 Sorghum m... 270 1e-080
gb|CW228649.1|CW228649 104_668_11206494_116_37254_021 Sorgh... 155 7e-070
gb|CW289715.1|CW289715 104_768_11412628_116_35546_004 Sorgh... 155 7e-070
gb|CW045261.1|CW045261 104_281_10509453_114_30236 Sorghum m... 155 7e-070
gb|CW228650.1|CW228650 104_668_11206494_148_37253_021 Sorgh... 191 7e-069
gb|CX619515.1|CX619515 GABR1_46_B03.b1_A002 GA- or brassino... 155 4e-061
gb|CX620595.1|CX620595 GABR1_52_G03.g1_A002 GA- or brassino... 201 1e-052
gb|BE357457.1|BE357457 DG1_20_B04.b2_A002 Dark Grown 1 (DG1... 155 4e-047
gb|BZ342488.1|BZ342488 ic83h06.b1 WGS-SbicolorF (JM107 adap... 111 1e-044
gb|CW513474.1|CW513474 115_4_10511640_1_30021 Sorghum unfil... 110 1e-041
gb|CW338135.1|CW338135 104_838_11484582_116_36125_025 Sorgh... 97 1e-040
gb|CW158850.1|CW158850 104_564_11149046_148_36401_051 Sorgh... 73 1e-040
gb|CN138418.1|CN138418 OX1_63_E01.g1_A002 Oxidatively-stres... 68 1e-038
gb|AW922545.1|AW922545 DG1_20_B04.g1_A002 Dark Grown 1 (DG1... 155 2e-038
gb|CX620512.1|CX620512 GABR1_52_G03.b1_A002 GA- or brassino... 155 2e-038
gb|BG357669.1|BG357669 OV2_32_G10.g1_A002 Ovary 2 (OV2) Sor... 124 6e-038
gb|CW499023.1|CW499023 fsbb001f293j08f0 Sorghum methylation... 70 2e-035
gb|CW199665.1|CW199665 104_624_11183633_148_36850_065 Sorgh... 81 1e-034
gb|CX607235.1|CX607235 ANR1_7_A06.g1_A002 Anaerobic roots S... 93 5e-034
gb|CN149285.1|CN149285 WOUND1_61_G04.g1_A002 Wounded leaves... 93 7e-034
gb|CN148035.1|CN148035 WOUND1_53_G05.g1_A002 Wounded leaves... 90 6e-033
gb|CW260769.1|CW260769 104_727_11229143_116_35195_086 Sorgh... 94 8e-033
gb|CW224533.1|CW224533 104_660_11203494_148_37445_017 Sorgh... 94 3e-032
gb|CW289716.1|CW289716 104_768_11412628_148_35550_004 Sorgh... 118 3e-031
gb|CW135684.1|CW135684 104_520_11117978_116_34839_009 Sorgh... 92 3e-031
gb|CW222650.1|CW222650 104_658_11202489_148_37178_043 Sorgh... 93 1e-030
gb|CX607145.1|CX607145 ANR1_7_A06.b1_A002 Anaerobic roots S... 93 4e-030
gb|CW325782.1|CW325782 104_820_11477874_116_35926_065 Sorgh... 68 5e-030
gb|CW338136.1|CW338136 104_838_11484582_148_36124_025 Sorgh... 89 7e-030
gb|CN142049.1|CN142049 WOUND1_3_C03.g1_A002 Wounded leaves ... 84 3e-029
gb|CW273536.1|CW273536 104_746_11403953_148_35366_077 Sorgh... 88 3e-029
gb|CW213992.1|CW213992 104_645_11191856_148_37040_020 Sorgh... 65 7e-029
gb|AW679848.1|AW679848 WS1_32_F10.g1_A002 Water-stressed 1 ... 79 2e-027
gb|CW241892.1|CW241892 104_701_11219026_116_37558_043 Sorgh... 124 2e-027
gb|BE592617.1|BE592617 WS1_95_H02.b1_A002 Water-stressed 1 ... 69 6e-027
gb|CW111876.1|CW111876 104_485_11104574_116_34538_055 Sorgh... 104 2e-025
gb|CW271598.1|CW271598 104_743_11403084_116_35339_034 Sorgh... 73 2e-025
gb|CW213991.1|CW213991 104_645_11191856_116_37041_020 Sorgh... 73 2e-025
gb|CN147959.1|CN147959 WOUND1_53_G05.b1_A002 Wounded leaves... 76 6e-025
gb|CW271599.1|CW271599 104_743_11403084_148_35343_034 Sorgh... 63 8e-025
gb|CW051311.1|CW051311 104_291_10515176_114_30192 Sorghum m... 116 9e-025
gb|CW182784.1|CW182784 104_598_11164264_116_36670_058 Sorgh... 68 2e-024
gb|CW325783.1|CW325783 104_820_11477874_148_35927_065 Sorgh... 85 5e-024
gb|BG412301.1|BG412301 OV2_40_C07.b1_A002 Ovary 2 (OV2) Sor... 66 5e-024
gb|CW457734.1|CW457734 fsbb001f203k22k0 Sorghum methylation... 66 2e-023
gb|CW199664.1|CW199664 104_624_11183633_116_37058_065 Sorgh... 71 2e-023
gb|CL180837.1|CL180837 104_391_10896308_116_31928_068 Sorgh... 55 6e-023
gb|BZ342489.1|BZ342489 ic83h06.g1 WGS-SbicolorF (JM107 adap... 109 6e-023
gb|CW313125.1|CW313125 104_803_11471123_148_35790_044 Sorgh... 70 4e-022
gb|BG241362.1|BG241362 RHIZ2_51_B01.g1_A003 Rhizome2 (RHIZ2... 71 4e-022
gb|CD224131.1|CD224131 CCC1_32_B09.b1_A007 Callus culture/c... 71 9e-022
gb|CN149200.1|CN149200 WOUND1_61_G04.b1_A002 Wounded leaves... 67 1e-021
gb|CW265100.1|CW265100 104_734_11231675_148_35261_044 Sorgh... 63 3e-021
gb|CW235244.1|CW235244 104_690_11214878_148_37412_055 Sorgh... 66 5e-021
gb|CD224241.1|CD224241 CCC1_32_B09.g1_A007 Callus culture/c... 62 8e-021
>gb|CW033844.1|CW033844 104_263_10502188_114_30359 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10502188, DNA
sequence
Length = 589
Score = 270 bits (585), Expect(2) = 1e-080
Identities = 118/140 (84%), Positives = 122/140 (87%)
Frame = +3 / -2
Query: 222 PTPMPKRLDGKVAIVTGGARGIGEAIVRLFAKHGARXXXXXXXXXXGEALASALGPQVSF 401
P + RLDGKVAIVTGGARGIGEAIVRLF KHGAR GEALASALGPQVSF
Sbjct: 537 PVCLSCRLDGKVAIVTGGARGIGEAIVRLFVKHGARVVIADIDDAAGEALASALGPQVSF 358
Query: 402 VRCDVSVEDDVRRAVDWALSRHGGRLDVYCNNAGVLGRQTRAARSILSFDAAEFDRVLRV 581
VRCDVSVE+DV RAV+WALSRHGGRLDVYCNNAGVLGRQTRAA+SILSFDA EFDRVLRV
Sbjct: 357 VRCDVSVEEDVARAVEWALSRHGGRLDVYCNNAGVLGRQTRAAKSILSFDAGEFDRVLRV 178
Query: 582 NALGAALGMKHAARAMAPRR 641
NALGAALGMKHAA AMAPRR
Sbjct: 177 NALGAALGMKHAALAMAPRR 118
Score = 211 bits (456), Expect = 1e-053
Identities = 90/124 (72%), Positives = 92/124 (74%)
Frame = -1 / +1
Query: 614 VLHPERGAQRVDAEHAVELGRVEGQDAPGGARLAAQHPGXXXXXXXXXXXARQRPVHGAP 435
VLHPERGAQRVD EHAVEL RVEGQDA GGARLAAQHPG RQRP+HGA
Sbjct: 145 VLHPERGAQRVDTEHAVELARVEGQDALGGARLAAQHPGVVAVDVQTPAVPRQRPLHGAR 324
Query: 434 DVVLHGHVAAHEADXXXXXXXXXXXRGVVDVRDHHPGPVLGEQPHDGLADPARAARHNGH 255
DV+LH HVAAHEAD GVVDVRDHHPGPVL EQPHDGLAD RAARHNGH
Sbjct: 325 DVLLHRHVAAHEADLRAQRRRQRLPGGVVDVRDHHPGPVLHEQPHDGLADAPRAARHNGH 504
Query: 254 LPVQ 243
LPVQ
Sbjct: 505 LPVQ 516
Score = 211 bits (456), Expect = 1e-053
Identities = 96/150 (64%), Positives = 99/150 (66%)
Frame = -2 / +2
Query: 688 PPSTAATLATETMLPARRGAMARAACFIPSAAPSALTRSTRSNSAASKDRMLLAARVWRP 509
P + A + PARRGAMA AACFIPSAAPSALTRSTRSNS ASKDRMLLAARVWRP
Sbjct: 71 PSTPATLATETMLPPARRGAMASAACFIPSAAPSALTRSTRSNSPASKDRMLLAARVWRP 250
Query: 508 STPALLQ*TSRRPPWXXXXXXXXXXXXXXXXXXXXTKLTCGPXXXXXXXXXXXXXXAITT 329
STPALLQ*TSRRPP TKLTCGP AITT
Sbjct: 251 STPALLQ*TSRRPPCRDSAHSTARATSSSTDTSQRTKLTCGPSADASASPAASSMSAITT 430
Query: 328 RAPCLANSRTMASPIPRAPPVTMATFPSSL 239
RAPC NS TMASP+P APPVTMATFPSSL
Sbjct: 431 RAPCFTNSLTMASPMPLAPPVTMATFPSSL 520
Score = 135 bits (289), Expect(2) = 8e-035
Identities = 52/71 (73%), Positives = 53/71 (74%)
Frame = +1 / -3
Query: 403 CAATCPWRTTSGAPWTGRCRXXXXXXXXXXXXPGCWAARRAPPGASCPSTRPSSTACSAS 582
CAATC WR TS APW+GRCR PGCWAARRAPP ASCPSTR SSTACS S
Sbjct: 356 CAATCRWRRTSRAPWSGRCRGTAGVWTSTATTPGCWAARRAPPRASCPSTRASSTACSVS 177
Query: 583 TRWAPRSG*ST 615
TRWAPRSG*ST
Sbjct: 176 TRWAPRSG*ST 144
Score = 51.9 bits (107), Expect(2) = 1e-080
Identities = 20/20 (100%), Positives = 20/20 (100%)
Frame = +3 / -2
Query: 696 PHAYTASKHAIVGLTKNAAC 755
PHAYTASKHAIVGLTKNAAC
Sbjct: 60 PHAYTASKHAIVGLTKNAAC 1
Score = 34.1 bits (68), Expect(2) = 8e-035
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = +1 / -3
Query: 232 CPRGWTGRWPLXXXXXXXXXXPSCGC 309
C WTGRWPL PS GC
Sbjct: 527 CRADWTGRWPL*RAARGASARPS*GC 450
>gb|CW228649.1|CW228649 104_668_11206494_116_37254_021 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11206494, DNA
sequence
Length = 599
Score = 155 bits (333), Expect(3) = 7e-070
Identities = 68/80 (85%), Positives = 75/80 (93%)
Frame = +3 / -1
Query: 894 VTVPSDQEVEKMEEVVRGLATLKGPTLRPRDIAEAVLFLASDEARYISGHNLVVDGGVTT 1073
+TVPSD+EVEKMEEVVRGLATLKGPTLRPRDIAEAVLFLASDE+RYISGHNLVVDGGVTT
Sbjct: 341 ITVPSDEEVEKMEEVVRGLATLKGPTLRPRDIAEAVLFLASDESRYISGHNLVVDGGVTT 162
Query: 1074 SRNLIGL*INVNPFQISHSH 1133
SRNLIGL*+ P+ +HS+
Sbjct: 161 SRNLIGL*M*SVPWLRTHSN 102
Score = 142 bits (305), Expect(4) = 4e-069
Identities = 63/73 (86%), Positives = 67/73 (91%)
Frame = -2 / +1
Query: 1114 NGLTLIHKPMRFLDVVTPPSTTRLWPDIYLASSLARKSTASAMSLGLSVGPLSVARPLTT 935
+G IHKP+RFL+VVTPPSTTRLWP+IYL SSLARKSTASAMSLGLSVGPLSVA PLTT
Sbjct: 121 HGTDHIHKPIRFLEVVTPPSTTRLWPEIYLDSSLARKSTASAMSLGLSVGPLSVASPLTT 300
Query: 934 SSIFSTSWSLGTV 896
SSIFSTS SLGTV
Sbjct: 301 SSIFSTSSSLGTV 339
Score = 124 bits (266), Expect(4) = 4e-069
Identities = 50/53 (94%), Positives = 51/53 (96%)
Frame = -2 / +1
Query: 844 WPWRQALMSMGVATPKGETQLTRTPCARSSQAAFLVSPTMACLEAV*ACGPRP 686
WPWRQALMSMGVATPKG+TQLTR PCA SSQAAFLVSPTMACLEAV*ACGPRP
Sbjct: 379 WPWRQALMSMGVATPKGDTQLTRMPCAPSSQAAFLVSPTMACLEAV*ACGPRP 537
Score = 123 bits (264), Expect(3) = 7e-070
Identities = 48/50 (96%), Positives = 49/50 (98%)
Frame = +3 / -1
Query: 696 PHAYTASKHAIVGLTKNAACELRAHGVRVNCVSPFGVATPMLINAWRQGH 845
PHAYTASKHAIVGLTKNAACEL AHG+RVNCVSPFGVATPMLINAWRQGH
Sbjct: 527 PHAYTASKHAIVGLTKNAACELGAHGIRVNCVSPFGVATPMLINAWRQGH 378
Score = 100 bits (212), Expect(2) = 6e-029
Identities = 43/53 (81%), Positives = 46/53 (86%)
Frame = -1 / +3
Query: 1097 SQADEVPGCGDAAVHDKVVARYIPGLVAGQEEHRLGDVPGPERGALERGQAPD 939
SQAD+VPG GDAAVHD+VVA I LVAGQEEHRLGDVPG +RGALERGQ PD
Sbjct: 138 SQADQVPGGGDAAVHDEVVAGDIS*LVAGQEEHRLGDVPGSQRGALERGQPPD 296
Score = 49.6 bits (102), Expect(2) = 6e-029
Identities = 20/24 (83%), Positives = 21/24 (87%)
Frame = -1 / +3
Query: 824 DEHGRGDAEGRDAVDPDPVRAQLA 753
DEHGRGDAEGR AVD D VRA+LA
Sbjct: 399 DEHGRGDAEGRHAVDADAVRAELA 470
Score = 31.3 bits (62), Expect(4) = 4e-069
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = -2 / +3
Query: 694 PRPPSTAATLATETMLP 644
P+ ST ATLATETMLP
Sbjct: 528 PQAASTPATLATETMLP 578
Score = 26.3 bits (51), Expect(3) = 7e-070
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = +2 / -1
Query: 1130 PWLG*LEKEREKTAISCT*SDRF 1198
PWL R + SCT*SDRF
Sbjct: 125 PWLRTHSN*RREKKSSCT*SDRF 57
Score = 22.6 bits (43), Expect(4) = 4e-069
Identities = 7/8 (87%), Positives = 8/8 (100%)
Frame = -1 / +2
Query: 1199 KIDHFKYN 1176
+IDHFKYN
Sbjct: 56 EIDHFKYN 79
>gb|CW289715.1|CW289715 104_768_11412628_116_35546_004 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11412628, DNA
sequence
Length = 516
Score = 155 bits (333), Expect(3) = 7e-070
Identities = 68/80 (85%), Positives = 75/80 (93%)
Frame = +3 / -1
Query: 894 VTVPSDQEVEKMEEVVRGLATLKGPTLRPRDIAEAVLFLASDEARYISGHNLVVDGGVTT 1073
+TVPSD+EVEKMEEVVRGLATLKGPTLRPRDIAEAVLFLASDE+RYISGHNLVVDGGVTT
Sbjct: 294 ITVPSDEEVEKMEEVVRGLATLKGPTLRPRDIAEAVLFLASDESRYISGHNLVVDGGVTT 115
Query: 1074 SRNLIGL*INVNPFQISHSH 1133
SRNLIGL*+ P+ +HS+
Sbjct: 114 SRNLIGL*M*SVPWLRTHSN 55
Score = 142 bits (305), Expect(3) = 1e-069
Identities = 63/73 (86%), Positives = 67/73 (91%)
Frame = -2 / +2
Query: 1114 NGLTLIHKPMRFLDVVTPPSTTRLWPDIYLASSLARKSTASAMSLGLSVGPLSVARPLTT 935
+G IHKP+RFL+VVTPPSTTRLWP+IYL SSLARKSTASAMSLGLSVGPLSVA PLTT
Sbjct: 74 HGTDHIHKPIRFLEVVTPPSTTRLWPEIYLDSSLARKSTASAMSLGLSVGPLSVASPLTT 253
Query: 934 SSIFSTSWSLGTV 896
SSIFSTS SLGTV
Sbjct: 254 SSIFSTSSSLGTV 292
Score = 139 bits (298), Expect(3) = 1e-069
Identities = 57/61 (93%), Positives = 58/61 (95%)
Frame = -2 / +2
Query: 844 WPWRQALMSMGVATPKGETQLTRTPCARSSQAAFLVSPTMACLEAV*ACGPRPPSTAATL 665
WPWRQALMSMGVATPKG+TQLTR PCA SSQAAFLVSPTMACLEAV*ACGPRPPST ATL
Sbjct: 332 WPWRQALMSMGVATPKGDTQLTRMPCAPSSQAAFLVSPTMACLEAV*ACGPRPPSTPATL 511
Query: 664 A 662
A
Sbjct: 512 A 514
Score = 123 bits (264), Expect(3) = 7e-070
Identities = 48/50 (96%), Positives = 49/50 (98%)
Frame = +3 / -1
Query: 696 PHAYTASKHAIVGLTKNAACELRAHGVRVNCVSPFGVATPMLINAWRQGH 845
PHAYTASKHAIVGLTKNAACEL AHG+RVNCVSPFGVATPMLINAWRQGH
Sbjct: 480 PHAYTASKHAIVGLTKNAACELGAHGIRVNCVSPFGVATPMLINAWRQGH 331
Score = 100 bits (212), Expect(2) = 6e-029
Identities = 43/53 (81%), Positives = 46/53 (86%)
Frame = -1 / +1
Query: 1097 SQADEVPGCGDAAVHDKVVARYIPGLVAGQEEHRLGDVPGPERGALERGQAPD 939
SQAD+VPG GDAAVHD+VVA I LVAGQEEHRLGDVPG +RGALERGQ PD
Sbjct: 91 SQADQVPGGGDAAVHDEVVAGDIS*LVAGQEEHRLGDVPGSQRGALERGQPPD 249
Score = 49.6 bits (102), Expect(2) = 6e-029
Identities = 20/24 (83%), Positives = 21/24 (87%)
Frame = -1 / +1
Query: 824 DEHGRGDAEGRDAVDPDPVRAQLA 753
DEHGRGDAEGR AVD D VRA+LA
Sbjct: 352 DEHGRGDAEGRHAVDADAVRAELA 423
Score = 26.3 bits (51), Expect(3) = 7e-070
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = +2 / -1
Query: 1130 PWLG*LEKEREKTAISCT*SDRF 1198
PWL R + SCT*SDRF
Sbjct: 78 PWLRTHSN*RREKKSSCT*SDRF 10
Score = 22.6 bits (43), Expect(3) = 1e-069
Identities = 7/8 (87%), Positives = 8/8 (100%)
Frame = -1 / +3
Query: 1199 KIDHFKYN 1176
+IDHFKYN
Sbjct: 9 EIDHFKYN 32
>gb|CW045261.1|CW045261 104_281_10509453_114_30236 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10509453, DNA
sequence
Length = 505
Score = 155 bits (333), Expect(3) = 7e-070
Identities = 68/80 (85%), Positives = 75/80 (93%)
Frame = +3 / -2
Query: 894 VTVPSDQEVEKMEEVVRGLATLKGPTLRPRDIAEAVLFLASDEARYISGHNLVVDGGVTT 1073
+TVPSD+EVEKMEEVVRGLATLKGPTLRPRDIAEAVLFLASDE+RYISGHNLVVDGGVTT
Sbjct: 318 ITVPSDEEVEKMEEVVRGLATLKGPTLRPRDIAEAVLFLASDESRYISGHNLVVDGGVTT 139
Query: 1074 SRNLIGL*INVNPFQISHSH 1133
SRNLIGL*+ P+ +HS+
Sbjct: 138 SRNLIGL*M*SVPWLRTHSN 79
Score = 142 bits (305), Expect(3) = 1e-062
Identities = 63/73 (86%), Positives = 67/73 (91%)
Frame = -2 / +2
Query: 1114 NGLTLIHKPMRFLDVVTPPSTTRLWPDIYLASSLARKSTASAMSLGLSVGPLSVARPLTT 935
+G IHKP+RFL+VVTPPSTTRLWP+IYL SSLARKSTASAMSLGLSVGPLSVA PLTT
Sbjct: 98 HGTDHIHKPIRFLEVVTPPSTTRLWPEIYLDSSLARKSTASAMSLGLSVGPLSVASPLTT 277
Query: 934 SSIFSTSWSLGTV 896
SSIFSTS SLGTV
Sbjct: 278 SSIFSTSSSLGTV 316
Score = 123 bits (264), Expect(3) = 7e-070
Identities = 48/50 (96%), Positives = 49/50 (98%)
Frame = +3 / -2
Query: 696 PHAYTASKHAIVGLTKNAACELRAHGVRVNCVSPFGVATPMLINAWRQGH 845
PHAYTASKHAIVGLTKNAACEL AHG+RVNCVSPFGVATPMLINAWRQGH
Sbjct: 504 PHAYTASKHAIVGLTKNAACELGAHGIRVNCVSPFGVATPMLINAWRQGH 355
Score = 116 bits (247), Expect(3) = 1e-062
Identities = 47/50 (94%), Positives = 48/50 (96%)
Frame = -2 / +2
Query: 844 WPWRQALMSMGVATPKGETQLTRTPCARSSQAAFLVSPTMACLEAV*ACG 695
WPWRQALMSMGVATPKG+TQLTR PCA SSQAAFLVSPTMACLEAV*ACG
Sbjct: 356 WPWRQALMSMGVATPKGDTQLTRMPCAPSSQAAFLVSPTMACLEAV*ACG 505
Score = 97.7 bits (207), Expect(2) = 3e-028
Identities = 42/53 (79%), Positives = 46/53 (86%)
Frame = -1 / +1
Query: 1097 SQADEVPGCGDAAVHDKVVARYIPGLVAGQEEHRLGDVPGPERGALERGQAPD 939
SQA++VPG GDAAVHD+VVA I LVAGQEEHRLGDVPG +RGALERGQ PD
Sbjct: 115 SQANQVPGGGDAAVHDEVVAGDIS*LVAGQEEHRLGDVPGSQRGALERGQPPD 273
Score = 49.6 bits (102), Expect(2) = 3e-028
Identities = 20/24 (83%), Positives = 21/24 (87%)
Frame = -1 / +1
Query: 824 DEHGRGDAEGRDAVDPDPVRAQLA 753
DEHGRGDAEGR AVD D VRA+LA
Sbjct: 376 DEHGRGDAEGRHAVDADAVRAELA 447
Score = 26.3 bits (51), Expect(3) = 7e-070
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = +2 / -2
Query: 1130 PWLG*LEKEREKTAISCT*SDRF 1198
PWL R + SCT*SDRF
Sbjct: 102 PWLRTHSN*RREKKSSCT*SDRF 34
Score = 22.6 bits (43), Expect(3) = 1e-062
Identities = 7/8 (87%), Positives = 8/8 (100%)
Frame = -1 / +3
Query: 1199 KIDHFKYN 1176
+IDHFKYN
Sbjct: 33 EIDHFKYN 56
>gb|CW228650.1|CW228650 104_668_11206494_148_37253_021 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11206494, DNA
sequence
Length = 496
Score = 191 bits (412), Expect(2) = 7e-069
Identities = 82/101 (81%), Positives = 85/101 (84%)
Frame = +3 / +2
Query: 222 PTPMPKRLDGKVAIVTGGARGIGEAIVRLFAKHGARXXXXXXXXXXGEALASALGPQVSF 401
P + RLDGKVAIVTGGARGIGEAIVRLF KHGAR GEALASALGPQVSF
Sbjct: 194 PVCLSCRLDGKVAIVTGGARGIGEAIVRLFVKHGARVVIADIDDAAGEALASALGPQVSF 373
Query: 402 VRCDVSVEDDVRRAVDWALSRHGGRLDVYCNNAGVLGRQTR 524
VRCDVSVE+DV RAV+WALSRHGGRLDVYCNNAGVLGRQTR
Sbjct: 374 VRCDVSVEEDVARAVEWALSRHGGRLDVYCNNAGVLGRQTR 496
Score = 149 bits (319), Expect(2) = 2e-051
Identities = 63/94 (67%), Positives = 65/94 (69%)
Frame = -1 / -1
Query: 524 ARLAAQHPGXXXXXXXXXXXARQRPVHGAPDVVLHGHVAAHEADXXXXXXXXXXXRGVVD 345
ARLAAQHPG RQRP+HGA DV+LH HVAAHEAD GVVD
Sbjct: 496 ARLAAQHPGVVAVDVQTPAVPRQRPLHGARDVLLHRHVAAHEADLRAQRRRQRLPGGVVD 317
Query: 344 VRDHHPGPVLGEQPHDGLADPARAARHNGHLPVQ 243
VRDHHPGPVL EQPHDGLAD RAARHNGHLPVQ
Sbjct: 316 VRDHHPGPVLHEQPHDGLADAPRAARHNGHLPVQ 215
Score = 124 bits (266), Expect(2) = 3e-041
Identities = 55/95 (57%), Positives = 56/95 (58%)
Frame = -2 / -2
Query: 523 RVWRPSTPALLQ*TSRRPPWXXXXXXXXXXXXXXXXXXXXTKLTCGPXXXXXXXXXXXXX 344
RVWRPSTPALLQ*TSRRPP TKLTCGP
Sbjct: 495 RVWRPSTPALLQ*TSRRPPCRDSAHSTARATSSSTDTSQRTKLTCGPSADASASPAASSM 316
Query: 343 XAITTRAPCLANSRTMASPIPRAPPVTMATFPSSL 239
AITTRAPC NS TMASP+P APPVTMATFPSSL
Sbjct: 315 SAITTRAPCFTNSLTMASPMPLAPPVTMATFPSSL 211
Score = 91.8 bits (194), Expect(2) = 7e-069
Identities = 33/36 (91%), Positives = 34/36 (94%)
Frame = +3 / +3
Query: 135 DLRPEIAHAHQPVMSPSHHGWDGNGATAVPTPMPKR 242
DLRPE+AHAHQPVMSPSHHGWDGNGA VPTPMPKR
Sbjct: 3 DLRPEMAHAHQPVMSPSHHGWDGNGAAVVPTPMPKR 110
Score = 76.2 bits (160), Expect(2) = 2e-051
Identities = 31/36 (86%), Positives = 32/36 (88%)
Frame = -1 / -3
Query: 242 PLGHRCGHGCGAIAVPAVVRGRHDGLVRVRYLGAEV 135
PLGHR GH CGAIAVPAVVR RHDGLV VR+LGAEV
Sbjct: 110 PLGHRSGHDCGAIAVPAVVRRRHDGLVGVRHLGAEV 3
Score = 69.3 bits (145), Expect(3) = 3e-024
Identities = 24/40 (60%), Positives = 25/40 (62%)
Frame = +1 / +3
Query: 403 CAATCPWRTTSGAPWTGRCRXXXXXXXXXXXXPGCWAARR 522
CAATC WR TS APW+GRCR PGCWAARR
Sbjct: 375 CAATCRWRRTSRAPWSGRCRGTAGVWTSTATTPGCWAARR 494
Score = 66.1 bits (138), Expect(2) = 3e-041
Identities = 25/31 (80%), Positives = 26/31 (83%)
Frame = -2 / -1
Query: 247 SSLLGIGVGTAVAPLPSQPW*EGDMTGWCAC 155
S LLGIGVGT APLPSQPW +GDMTGW AC
Sbjct: 115 SYLLGIGVGTTAAPLPSQPWCDGDMTGWWAC 23
Score = 48.3 bits (99), Expect(3) = 3e-024
Identities = 18/23 (78%), Positives = 21/23 (91%)
Frame = +2 / +2
Query: 173 HVALSPRLGRQWRHSRAHTDAQE 241
HVA++PRLGRQWR SRAH+ AQE
Sbjct: 41 HVAVAPRLGRQWRRSRAHSYAQE 109
Score = 34.1 bits (68), Expect(3) = 3e-024
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = +1 / +3
Query: 232 CPRGWTGRWPLXXXXXXXXXXPSCGC 309
C WTGRWPL PS GC
Sbjct: 204 CRADWTGRWPL*RAARGASARPS*GC 281
>gb|CX619515.1|CX619515 GABR1_46_B03.b1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_46_B03_A002 3', mRNA sequence
Length = 602
Score = 155 bits (333), Expect(3) = 4e-061
Identities = 68/80 (85%), Positives = 75/80 (93%)
Frame = +3 / +1
Query: 894 VTVPSDQEVEKMEEVVRGLATLKGPTLRPRDIAEAVLFLASDEARYISGHNLVVDGGVTT 1073
+TVPSD+EVEKMEEVVRGLATLKGPTLRPRDIAEAVLFLASDE+RYISGHNLVVDGGVTT
Sbjct: 151 ITVPSDEEVEKMEEVVRGLATLKGPTLRPRDIAEAVLFLASDESRYISGHNLVVDGGVTT 330
Query: 1074 SRNLIGL*INVNPFQISHSH 1133
SRNLIGL*+ P+ +HS+
Sbjct: 331 SRNLIGL*M*SVPWLRTHSN 390
Score = 142 bits (305), Expect(3) = 2e-053
Identities = 63/73 (86%), Positives = 67/73 (91%)
Frame = -2 / -1
Query: 1114 NGLTLIHKPMRFLDVVTPPSTTRLWPDIYLASSLARKSTASAMSLGLSVGPLSVARPLTT 935
+G IHKP+RFL+VVTPPSTTRLWP+IYL SSLARKSTASAMSLGLSVGPLSVA PLTT
Sbjct: 371 HGTDHIHKPIRFLEVVTPPSTTRLWPEIYLDSSLARKSTASAMSLGLSVGPLSVASPLTT 192
Query: 934 SSIFSTSWSLGTV 896
SSIFSTS SLGTV
Sbjct: 191 SSIFSTSSSLGTV 153
Score = 100 bits (212), Expect(2) = 6e-029
Identities = 43/53 (81%), Positives = 46/53 (86%)
Frame = -1 / -3
Query: 1097 SQADEVPGCGDAAVHDKVVARYIPGLVAGQEEHRLGDVPGPERGALERGQAPD 939
SQAD+VPG GDAAVHD+VVA I LVAGQEEHRLGDVPG +RGALERGQ PD
Sbjct: 354 SQADQVPGGGDAAVHDEVVAGDIS*LVAGQEEHRLGDVPGSQRGALERGQPPD 196
Score = 94.5 bits (200), Expect(3) = 4e-061
Identities = 36/38 (94%), Positives = 37/38 (97%)
Frame = +3 / +1
Query: 732 GLTKNAACELRAHGVRVNCVSPFGVATPMLINAWRQGH 845
GLTKNAACEL AHG+RVNCVSPFGVATPMLINAWRQGH
Sbjct: 1 GLTKNAACELGAHGIRVNCVSPFGVATPMLINAWRQGH 114
Score = 85.4 bits (180), Expect(3) = 2e-053
Identities = 34/37 (91%), Positives = 35/37 (94%)
Frame = -2 / -1
Query: 844 WPWRQALMSMGVATPKGETQLTRTPCARSSQAAFLVS 734
WPWRQALMSMGVATPKG+TQLTR PCA SSQAAFLVS
Sbjct: 113 WPWRQALMSMGVATPKGDTQLTRMPCAPSSQAAFLVS 3
Score = 49.6 bits (102), Expect(2) = 6e-029
Identities = 20/24 (83%), Positives = 21/24 (87%)
Frame = -1 / -3
Query: 824 DEHGRGDAEGRDAVDPDPVRAQLA 753
DEHGRGDAEGR AVD D VRA+LA
Sbjct: 93 DEHGRGDAEGRHAVDADAVRAELA 22
Score = 26.3 bits (51), Expect(3) = 4e-061
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = +2 / +1
Query: 1130 PWLG*LEKEREKTAISCT*SDRF 1198
PWL R + SCT*SDRF
Sbjct: 367 PWLRTHSN*RREKKSSCT*SDRF 435
Score = 22.6 bits (43), Expect(3) = 2e-053
Identities = 7/8 (87%), Positives = 8/8 (100%)
Frame = -1 / -2
Query: 1199 KIDHFKYN 1176
+IDHFKYN
Sbjct: 436 EIDHFKYN 413
>gb|CX620595.1|CX620595 GABR1_52_G03.g1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_52_G03_A002 5', mRNA sequence
Length = 437
Score = 201 bits (434), Expect = 2e-050
Identities = 84/108 (77%), Positives = 86/108 (79%)
Frame = -1 / -3
Query: 407 AHEADXXXXXXXXXXXRGVVDVRDHHPGPVLGEQPHDGLADPARAARHNGHLPVQPLGHR 228
AHEAD GVVDVRDHHPGPVL EQPHDGLAD RAARHNGHLPVQ LGHR
Sbjct: 435 AHEADLRAQRRRQRLPGGVVDVRDHHPGPVLHEQPHDGLADAPRAARHNGHLPVQSLGHR 256
Query: 227 CGHGCGAIAVPAVVRGRHDGLVRVRYLGAEVQRRHSCRGVGGEASVHV 84
GH CGAIAVPAVVR RHDGLV VR+LGAEV+RRHSCR VGGEA VHV
Sbjct: 255 SGHDCGAIAVPAVVRRRHDGLVGVRHLGAEVERRHSCRCVGGEARVHV 112
Score = 187 bits (402), Expect(3) = 1e-052
Identities = 77/91 (84%), Positives = 78/91 (85%)
Frame = +3 / +1
Query: 135 DLRPEIAHAHQPVMSPSHHGWDGNGATAVPTPMPKRLDGKVAIVTGGARGIGEAIVRLFA 314
DLRPE+AHAHQPVMSPSHHGWDGNGA VPTPMPKRLDGKVAIVTGGARGIGEAIVRLF
Sbjct: 163 DLRPEMAHAHQPVMSPSHHGWDGNGAAVVPTPMPKRLDGKVAIVTGGARGIGEAIVRLFV 342
Query: 315 KHGARXXXXXXXXXXGEALASALGPQVSFVR 407
KHGAR GEALASALGPQVSFVR
Sbjct: 343 KHGARVVIADIDDAAGEALASALGPQVSFVR 435
Score = 147 bits (316), Expect = 3e-034
Identities = 62/106 (58%), Positives = 64/106 (60%)
Frame = -2 / -1
Query: 400 KLTCGPXXXXXXXXXXXXXXAITTRAPCLANSRTMASPIPRAPPVTMATFPSSLLGIGVG 221
KLTCGP AITTRAPC NS TMASP+P APPVTMATFPSSLLGIGVG
Sbjct: 428 KLTCGPSADASASPAASSMSAITTRAPCFTNSLTMASPMPLAPPVTMATFPSSLLGIGVG 249
Query: 220 TAVAPLPSQPW*EGDMTGWCACXXXXXXXXXXXXXXXXXXXXACMY 83
T APLPSQPW +GDMTGW AC ACMY
Sbjct: 248 TTAAPLPSQPWCDGDMTGWWACAISGRRSSAGIAAAA*EARLACMY 111
Score = 37.7 bits (76), Expect(3) = 1e-052
Identities = 13/16 (81%), Positives = 14/16 (87%)
Frame = +1 / +2
Query: 79 IHTCTLASPPTPRQLC 126
+HTCT ASPPT RQLC
Sbjct: 107 LHTCTRASPPTQRQLC 154
Score = 23.1 bits (44), Expect(3) = 1e-052
Identities = 8/21 (38%), Positives = 11/21 (52%)
Frame = +1 / +2
Query: 1 HALASCVFLCELWCGGRDTHS 63
H+ + L ELWCG H+
Sbjct: 35 HSRTRLLCLRELWCGRDSRHT 97
>gb|BE357457.1|BE357457 DG1_20_B04.b2_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 555
Score = 155 bits (333), Expect(3) = 4e-047
Identities = 68/80 (85%), Positives = 75/80 (93%)
Frame = +3 / +1
Query: 894 VTVPSDQEVEKMEEVVRGLATLKGPTLRPRDIAEAVLFLASDEARYISGHNLVVDGGVTT 1073
+TVPSD+EVEKMEEVVRGLATLKGPTLRPRDIAEAVLFLASDE+RYISGHNLVVDGGVTT
Sbjct: 97 ITVPSDEEVEKMEEVVRGLATLKGPTLRPRDIAEAVLFLASDESRYISGHNLVVDGGVTT 276
Query: 1074 SRNLIGL*INVNPFQISHSH 1133
SRNLIGL*+ P+ +HS+
Sbjct: 277 SRNLIGL*M*SVPWLRTHSN 336
Score = 142 bits (305), Expect(3) = 2e-042
Identities = 63/73 (86%), Positives = 67/73 (91%)
Frame = -2 / -2
Query: 1114 NGLTLIHKPMRFLDVVTPPSTTRLWPDIYLASSLARKSTASAMSLGLSVGPLSVARPLTT 935
+G IHKP+RFL+VVTPPSTTRLWP+IYL SSLARKSTASAMSLGLSVGPLSVA PLTT
Sbjct: 317 HGTDHIHKPIRFLEVVTPPSTTRLWPEIYLDSSLARKSTASAMSLGLSVGPLSVASPLTT 138
Query: 934 SSIFSTSWSLGTV 896
SSIFSTS SLGTV
Sbjct: 137 SSIFSTSSSLGTV 99
Score = 100 bits (212), Expect(2) = 8e-023
Identities = 43/53 (81%), Positives = 46/53 (86%)
Frame = -1 / -1
Query: 1097 SQADEVPGCGDAAVHDKVVARYIPGLVAGQEEHRLGDVPGPERGALERGQAPD 939
SQAD+VPG GDAAVHD+VVA I LVAGQEEHRLGDVPG +RGALERGQ PD
Sbjct: 300 SQADQVPGGGDAAVHDEVVAGDIS*LVAGQEEHRLGDVPGSQRGALERGQPPD 142
Score = 47.8 bits (98), Expect(3) = 2e-042
Identities = 17/17 (100%), Positives = 17/17 (100%)
Frame = -2 / -2
Query: 844 WPWRQALMSMGVATPKG 794
WPWRQALMSMGVATPKG
Sbjct: 59 WPWRQALMSMGVATPKG 9
Score = 47.3 bits (97), Expect(3) = 4e-047
Identities = 17/17 (100%), Positives = 17/17 (100%)
Frame = +3 / +1
Query: 795 PFGVATPMLINAWRQGH 845
PFGVATPMLINAWRQGH
Sbjct: 10 PFGVATPMLINAWRQGH 60
Score = 29.0 bits (57), Expect(2) = 8e-023
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = -1 / -1
Query: 824 DEHGRGDAEG 795
DEHGRGDAEG
Sbjct: 39 DEHGRGDAEG 10
Score = 26.3 bits (51), Expect(3) = 4e-047
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = +2 / +1
Query: 1130 PWLG*LEKEREKTAISCT*SDRF 1198
PWL R + SCT*SDRF
Sbjct: 313 PWLRTHSN*RREKKSSCT*SDRF 381
Score = 22.6 bits (43), Expect(3) = 2e-042
Identities = 7/8 (87%), Positives = 8/8 (100%)
Frame = -1 / -3
Query: 1199 KIDHFKYN 1176
+IDHFKYN
Sbjct: 382 EIDHFKYN 359
>gb|BZ342488.1|BZ342488 ic83h06.b1 WGS-SbicolorF (JM107 adapted methyl filtered) Sorghum
bicolor genomic clone ic83h06 5', DNA sequence
Length = 650
Score = 111 bits (237), Expect(2) = 1e-044
Identities = 48/67 (71%), Positives = 50/67 (74%)
Frame = -1 / +3
Query: 242 PLGHRCGHGCGAIAVPAVVRGRHDGLVRVRYLGAEVQRRHSCRGVGGEASVHVCMXXXXX 63
PLGHR GH CGAIAVPAVVR RHDGLV VR+LGAEV+RRHSCR VGGEA VHV
Sbjct: 231 PLGHRSGHDCGAIAVPAVVRRRHDGLVGVRHLGAEVERRHSCRCVGGEARVHVWSSGVCV 410
Query: 62 LCVSRPP 42
VS P
Sbjct: 411 SRVSTTP 431
Score = 91.8 bits (194), Expect(3) = 7e-041
Identities = 33/36 (91%), Positives = 34/36 (94%)
Frame = +3 / -1
Query: 135 DLRPEIAHAHQPVMSPSHHGWDGNGATAVPTPMPKR 242
DLRPE+AHAHQPVMSPSHHGWDGNGA VPTPMPKR
Sbjct: 338 DLRPEMAHAHQPVMSPSHHGWDGNGAAVVPTPMPKR 231
Score = 90.9 bits (192), Expect(2) = 1e-044
Identities = 35/38 (92%), Positives = 35/38 (92%)
Frame = -1 / +1
Query: 356 GVVDVRDHHPGPVLGEQPHDGLADPARAARHNGHLPVQ 243
GVVDVRDHHPGPVL EQPHDGLAD RAARHNGHLPVQ
Sbjct: 13 GVVDVRDHHPGPVLHEQPHDGLADAPRAARHNGHLPVQ 126
Score = 73.9 bits (155), Expect(2) = 7e-027
Identities = 33/79 (41%), Positives = 35/79 (44%)
Frame = -2 / +1
Query: 247 SSLLGIGVGTAVAPLPSQPW*EGDMTGWCACXXXXXXXXXXXXXXXXXXXXACMYXXXXX 68
S LLGIGVGT APLPSQPW +GDMTGW AC ACMY
Sbjct: 226 SYLLGIGVGTTAAPLPSQPWCDGDMTGWWACAISGRRSSAGIAAAA*EARLACMYGVVVC 405
Query: 67 XXXXCLDHHTTAHKERHKR 11
HH + R R
Sbjct: 406 VCLESRPHHNSRRHRRRVR 462
Score = 73.5 bits (154), Expect(3) = 7e-041
Identities = 33/49 (67%), Positives = 34/49 (69%)
Frame = +3 / -3
Query: 222 PTPMPKRLDGKVAIVTGGARGIGEAIVRLFAKHGARXXXXXXXXXXGEA 368
P + RLDGKVAIVTGGARGIGEAIVRLF KHGAR GEA
Sbjct: 147 PVCLSCRLDGKVAIVTGGARGIGEAIVRLFVKHGARVVIADIDDAAGEA 1
Score = 68.9 bits (144), Expect(2) = 7e-027
Identities = 28/33 (84%), Positives = 29/33 (87%)
Frame = -2 / +2
Query: 337 ITTRAPCLANSRTMASPIPRAPPVTMATFPSSL 239
ITTRAPC NS TMASP+P APPVTMATFPSSL
Sbjct: 32 ITTRAPCFTNSLTMASPMPLAPPVTMATFPSSL 130
Score = 42.8 bits (87), Expect(3) = 7e-041
Identities = 16/29 (55%), Positives = 19/29 (65%)
Frame = +1 / -2
Query: 40 CGGRDTHSSSNNNIHTCTLASPPTPRQLC 126
CG +T + +HTCT ASPPT RQLC
Sbjct: 433 CGVVETRDTHTPLLHTCTRASPPTQRQLC 347
>gb|CW513474.1|CW513474 115_4_10511640_1_30021 Sorghum unfiltered library (LibID: 115)
Sorghum bicolor genomic clone 10511640, DNA sequence
Length = 638
Score = 110 bits (235), Expect(2) = 1e-041
Identities = 45/53 (84%), Positives = 47/53 (88%)
Frame = -1 / +1
Query: 242 PLGHRCGHGCGAIAVPAVVRGRHDGLVRVRYLGAEVQRRHSCRGVGGEASVHV 84
PLGHR GH CGAIAVPAVVR RHDGLV VR+LGAEV+RRHSCR VGGEA VHV
Sbjct: 208 PLGHRSGHDCGAIAVPAVVRRRHDGLVGVRHLGAEVERRHSCRCVGGEARVHV 366
Score = 91.8 bits (194), Expect(4) = 6e-040
Identities = 33/36 (91%), Positives = 34/36 (94%)
Frame = +3 / -3
Query: 135 DLRPEIAHAHQPVMSPSHHGWDGNGATAVPTPMPKR 242
DLRPE+AHAHQPVMSPSHHGWDGNGA VPTPMPKR
Sbjct: 315 DLRPEMAHAHQPVMSPSHHGWDGNGAAVVPTPMPKR 208
Score = 81.7 bits (172), Expect(2) = 1e-041
Identities = 31/34 (91%), Positives = 31/34 (91%)
Frame = -1 / +2
Query: 344 VRDHHPGPVLGEQPHDGLADPARAARHNGHLPVQ 243
VRDHHPGPVL EQPHDGLAD RAARHNGHLPVQ
Sbjct: 2 VRDHHPGPVLHEQPHDGLADAPRAARHNGHLPVQ 103
Score = 69.8 bits (146), Expect(4) = 6e-040
Identities = 30/36 (83%), Positives = 31/36 (86%)
Frame = +3 / -2
Query: 222 PTPMPKRLDGKVAIVTGGARGIGEAIVRLFAKHGAR 329
P + RLDGKVAIVTGGARGIGEAIVRLF KHGAR
Sbjct: 124 PVCLSCRLDGKVAIVTGGARGIGEAIVRLFVKHGAR 17
Score = 69.8 bits (146), Expect(2) = 1e-025
Identities = 29/55 (52%), Positives = 30/55 (54%)
Frame = -2 / +2
Query: 247 SSLLGIGVGTAVAPLPSQPW*EGDMTGWCACXXXXXXXXXXXXXXXXXXXXACMY 83
S LLGIGVGT APLPSQPW +GDMTGW AC ACMY
Sbjct: 203 SYLLGIGVGTTAAPLPSQPWCDGDMTGWWACAISGRRSSAGIAAAA*EARLACMY 367
Score = 68.9 bits (144), Expect(2) = 1e-025
Identities = 28/33 (84%), Positives = 29/33 (87%)
Frame = -2 / +3
Query: 337 ITTRAPCLANSRTMASPIPRAPPVTMATFPSSL 239
ITTRAPC NS TMASP+P APPVTMATFPSSL
Sbjct: 9 ITTRAPCFTNSLTMASPMPLAPPVTMATFPSSL 107
Score = 37.7 bits (76), Expect(4) = 6e-040
Identities = 13/16 (81%), Positives = 14/16 (87%)
Frame = +1 / -1
Query: 79 IHTCTLASPPTPRQLC 126
+HTCT ASPPT RQLC
Sbjct: 371 LHTCTRASPPTQRQLC 324
Score = 23.1 bits (44), Expect(4) = 6e-040
Identities = 8/21 (38%), Positives = 11/21 (52%)
Frame = +1 / -1
Query: 1 HALASCVFLCELWCGGRDTHS 63
H+ + L ELWCG H+
Sbjct: 443 HSRTRLLCLRELWCGRDSRHT 381
>gb|CW338135.1|CW338135 104_838_11484582_116_36125_025 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11484582, DNA
sequence
Length = 727
Score = 96.8 bits (205), Expect(4) = 1e-040
Identities = 44/99 (44%), Positives = 54/99 (54%)
Frame = +3 / -3
Query: 543 SFDAAEFDRVLRVNALGAALGMKHAARAMAPRRXXXXXXXXXXXXXXXXXXPHAYTASKH 722
S D +FDRV+ VNA G G+KHAAR M PRR P AYTASK
Sbjct: 551 SIDLHDFDRVVAVNARGVLAGVKHAARVMLPRRGGSIICTASTTSLLGGILPPAYTASKA 372
Query: 723 AIVGLTKNAACELRAHGVRVNCVSPFGVATPMLINAWRQ 839
A+VGL + A E+ GVRVN +SP + TP+ + A Q
Sbjct: 371 AVVGLVRAVAAEVARSGVRVNAISPHAIPTPLTMAAVAQ 255
Score = 93.6 bits (198), Expect(3) = 1e-030
Identities = 46/96 (47%), Positives = 55/96 (57%)
Frame = -2 / +1
Query: 829 ALMSMGVATPKGETQLTRTPCARSSQAAFLVSPTMACLEAV*ACGPRPPSTAATLATETM 650
A + GV GE LTRTP +S A PT A LEAV A G PP+ LA + M
Sbjct: 265 AAIVSGVGMACGEMALTRTPERATSAATARTRPTTAALEAVYAGGSMPPNKEVVLAVQMM 444
Query: 649 LPARRGAMARAACFIPSAAPSALTRSTRSNSAASKD 542
LP RRG+M RAAC P++ P ALT +TRS S S +
Sbjct: 445 LPPRRGSMTRAACLTPASTPRALTATTRSKSWRSME 552
Score = 70.3 bits (147), Expect(4) = 1e-040
Identities = 28/59 (47%), Positives = 39/59 (66%)
Frame = +3 / -3
Query: 903 PSDQEVEKMEEVVRGLATLKGPTLRPRDIAEAVLFLASDEARYISGHNLVVDGGVTTSR 1079
P E V +G + GP L +D+A+A L+LASDEA+Y++GHNL+VDGG T S+
Sbjct: 248 PEGTVEEHRRIVEKGYNEMVGPVLEEKDVAKAALYLASDEAKYVNGHNLLVDGGYTVSK 72
Score = 51.9 bits (107), Expect(3) = 1e-030
Identities = 26/52 (50%), Positives = 31/52 (59%)
Frame = -2 / +1
Query: 1069 VTPPSTTRLWPDIYLASSLARKSTASAMSLGLSVGPLSVARPLTTSSIFSTS 914
V PPST+RLWP YLASS AR S A A S S GP P +T + S++
Sbjct: 82 VYPPSTSRLWPLTYLASSDARYSAAFATSFSSSTGPTISL*PFSTILLCSST 237
Score = 29.9 bits (59), Expect(4) = 1e-040
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +3 / -3
Query: 399 FVRCDVSVEDDVRRAVDWALSRHG 470
+ RCDV+ E V AVD A+ HG
Sbjct: 686 YTRCDVTDEAQVAAAVDLAVGLHG 615
Score = 28.1 bits (55), Expect(4) = 1e-040
Identities = 12/17 (70%), Positives = 12/17 (70%)
Frame = +3 / -3
Query: 471 GRLDVYCNNAGVLGRQT 521
GRLDV NNAGV G T
Sbjct: 617 GRLDVMFNNAGVFGDVT 567
Score = 27.6 bits (54), Expect(3) = 1e-030
Identities = 12/17 (70%), Positives = 12/17 (70%)
Frame = -2 / +1
Query: 520 VWRPSTPALLQ*TSRRP 470
V P TPALL TSRRP
Sbjct: 568 VTSPKTPALLNMTSRRP 618
>gb|CW158850.1|CW158850 104_564_11149046_148_36401_051 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11149046, DNA
sequence
Length = 686
Score = 73.5 bits (154), Expect(5) = 1e-040
Identities = 32/60 (53%), Positives = 41/60 (68%)
Frame = +3 / -3
Query: 915 EVEKMEEVVRGLATLKGPTLRPRDIAEAVLFLASDEARYISGHNLVVDGGVTTSRNLIGL 1094
E E E+ + +A LKG LR DIA AVL+LASD+ARYISGHNL++DGG + G+
Sbjct: 222 EGEAFEQAMEAVANLKGVRLRVADIAAAVLYLASDDARYISGHNLLLDGGFSIVNPSFGI 43
Score = 66.1 bits (138), Expect(5) = 1e-040
Identities = 25/40 (62%), Positives = 30/40 (75%)
Frame = +3 / -3
Query: 699 HAYTASKHAIVGLTKNAACELRAHGVRVNCVSPFGVATPM 818
HAYT +K +V LT+NAA EL HG+RVNCVSP ATP+
Sbjct: 363 HAYTCAKRGLVALTENAAAELGRHGIRVNCVSPAAAATPL 244
Score = 42.8 bits (87), Expect(5) = 1e-040
Identities = 19/37 (51%), Positives = 22/37 (59%)
Frame = +3 / -3
Query: 525 AARSILSFDAAEFDRVLRVNALGAALGMKHAARAMAP 635
A SI +F+RVL VN +G LG KHAAR M P
Sbjct: 540 ACHSIRESTKEDFERVLSVNLVGPFLGTKHAARVMVP 430
Score = 36.8 bits (74), Expect(5) = 1e-040
Identities = 15/25 (60%), Positives = 19/25 (76%)
Frame = +3 / -3
Query: 396 SFVRCDVSVEDDVRRAVDWALSRHG 470
S+V CDV+VE DV AVD A++R G
Sbjct: 657 SYVHCDVTVEADVAAAVDHAVARFG 583
Score = 23.1 bits (44), Expect(5) = 1e-040
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = +3 / -3
Query: 471 GRLDVYCNNAGVLGRQTRAAR 533
G LD+ NNAG+ G + R
Sbjct: 585 GALDIMFNNAGIGGAACHSIR 523
>gb|CN138418.1|CN138418 OX1_63_E01.g1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_63_E01_A002 5', mRNA sequence
Length = 709
Score = 67.5 bits (141), Expect(5) = 1e-038
Identities = 26/40 (65%), Positives = 32/40 (80%)
Frame = +3 / +3
Query: 699 HAYTASKHAIVGLTKNAACELRAHGVRVNCVSPFGVATPM 818
+AY +K A+V LT+NAA EL HG+RVNCVSP GVATP+
Sbjct: 492 YAYACAKRALVALTENAAAELGRHGIRVNCVSPAGVATPL 611
Score = 66.1 bits (138), Expect(4) = 4e-034
Identities = 29/44 (65%), Positives = 31/44 (70%)
Frame = -2 / -1
Query: 334 TTRAPCLANSRTMASPIPRAPPVTMATFPSSLLGIGVGTAVAPL 203
TTRAPC NSRT+ SPIP APPV MATFP + LG VG A L
Sbjct: 133 TTRAPCSTNSRTVRSPIPLAPPVIMATFPCNFLGGVVGRATVLL 2
Score = 66.1 bits (138), Expect(5) = 1e-038
Identities = 27/61 (44%), Positives = 37/61 (60%)
Frame = +3 / +3
Query: 204 NGATAVPTPMPKRLDGKVAIVTGGARGIGEAIVRLFAKHGARXXXXXXXXXXGEALASAL 383
+ A+PT P++L GKVA++TGGA GIGE VRLF +HGAR G + + +
Sbjct: 3 SSTVALPTTPPRKLQGKVAMITGGASGIGERTVRLFVEHGARVVVADIQDEAGARVCADV 182
Query: 384 G 386
G
Sbjct: 183 G 185
Score = 64.3 bits (134), Expect(4) = 4e-034
Identities = 34/64 (53%), Positives = 35/64 (54%)
Frame = -2 / -1
Query: 826 LMSMGVATPKGETQLTRTPCARSSQAAFLVSPTMACLEAV*ACGPRPPSTAATLATETML 647
LM GVATP GETQ TR PC SS AAF VS T A A P + AATL M
Sbjct: 619 LMVSGVATPAGETQFTRMPCRPSSAAAFSVSATSARFAHAYAYEDAPVTAAATLDVPMMQ 440
Query: 646 PARR 635
P RR
Sbjct: 439 PPRR 428
Score = 45.5 bits (93), Expect(5) = 1e-038
Identities = 20/39 (51%), Positives = 24/39 (61%)
Frame = +3 / +3
Query: 525 AARSILSFDAAEFDRVLRVNALGAALGMKHAARAMAPRR 641
A S+ A+F+RVL VN +G LG KHAAR M P R
Sbjct: 315 ACYSVRDSGKADFERVLAVNLVGPFLGTKHAARVMVPAR 431
Score = 42.8 bits (87), Expect(4) = 4e-034
Identities = 18/38 (47%), Positives = 21/38 (55%)
Frame = -2 / -1
Query: 646 PARRGAMARAACFIPSAAPSALTRSTRSNSAASKDRML 533
P R G + RAAC +P P+ T STRS SA R L
Sbjct: 436 PRRAGTITRAACLVPRNGPTRFTASTRSKSALPLSRTL 323
Score = 32.7 bits (65), Expect(5) = 1e-038
Identities = 13/25 (52%), Positives = 17/25 (68%)
Frame = +3 / +3
Query: 396 SFVRCDVSVEDDVRRAVDWALSRHG 470
S+ CDV+ EDDV AVD A++ G
Sbjct: 198 SYFHCDVTSEDDVAAAVDHAVATFG 272
Score = 29.5 bits (58), Expect(4) = 4e-034
Identities = 16/44 (36%), Positives = 17/44 (38%)
Frame = -1 / -3
Query: 461 RQRPVHGAPDVVLHGHVAAHEADXXXXXXXXXXXRGVVDVRDHH 330
R VH DVVL GHVA A G+V HH
Sbjct: 263 RHGVVHRGSDVVLAGHVAVEVAGGARANVGADARAGLVLDVGHH 132
Score = 23.5 bits (45), Expect(5) = 1e-038
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = +3 / +3
Query: 471 GRLDVYCNNAGVLG 512
G LD+ NNAGV G
Sbjct: 270 GALDIMFNNAGVSG 311
>gb|AW922545.1|AW922545 DG1_20_B04.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 501
Score = 155 bits (333), Expect(2) = 2e-038
Identities = 68/80 (85%), Positives = 75/80 (93%)
Frame = +3 / +2
Query: 894 VTVPSDQEVEKMEEVVRGLATLKGPTLRPRDIAEAVLFLASDEARYISGHNLVVDGGVTT 1073
+TVPSD+EVEKMEEVVRGLATLKGPTLRPRDIAEAVLFLASDE+RYISGHNLVVDGGVTT
Sbjct: 29 ITVPSDEEVEKMEEVVRGLATLKGPTLRPRDIAEAVLFLASDESRYISGHNLVVDGGVTT 208
Query: 1074 SRNLIGL*INVNPFQISHSH 1133
SRNLIGL*+ P+ +HS+
Sbjct: 209 SRNLIGL*M*SVPWLRTHSN 268
Score = 142 bits (305), Expect(2) = 1e-033
Identities = 63/73 (86%), Positives = 67/73 (91%)
Frame = -2 / -1
Query: 1114 NGLTLIHKPMRFLDVVTPPSTTRLWPDIYLASSLARKSTASAMSLGLSVGPLSVARPLTT 935
+G IHKP+RFL+VVTPPSTTRLWP+IYL SSLARKSTASAMSLGLSVGPLSVA PLTT
Sbjct: 249 HGTDHIHKPIRFLEVVTPPSTTRLWPEIYLDSSLARKSTASAMSLGLSVGPLSVASPLTT 70
Query: 934 SSIFSTSWSLGTV 896
SSIFSTS SLGTV
Sbjct: 69 SSIFSTSSSLGTV 31
Score = 26.3 bits (51), Expect(2) = 2e-038
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = +2 / +2
Query: 1130 PWLG*LEKEREKTAISCT*SDRF 1198
PWL R + SCT*SDRF
Sbjct: 245 PWLRTHSN*RREKKSSCT*SDRF 313
Score = 22.6 bits (43), Expect(2) = 1e-033
Identities = 7/8 (87%), Positives = 8/8 (100%)
Frame = -1 / -2
Query: 1199 KIDHFKYN 1176
+IDHFKYN
Sbjct: 314 EIDHFKYN 291
>gb|CX620512.1|CX620512 GABR1_52_G03.b1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_52_G03_A002 3', mRNA sequence
Length = 344
Score = 155 bits (333), Expect(2) = 2e-038
Identities = 68/80 (85%), Positives = 75/80 (93%)
Frame = +3 / +1
Query: 894 VTVPSDQEVEKMEEVVRGLATLKGPTLRPRDIAEAVLFLASDEARYISGHNLVVDGGVTT 1073
+TVPSD+EVEKMEEVVRGLATLKGPTLRPRDIAEAVLFLASDE+RYISGHNLVVDGGVTT
Sbjct: 1 ITVPSDEEVEKMEEVVRGLATLKGPTLRPRDIAEAVLFLASDESRYISGHNLVVDGGVTT 180
Query: 1074 SRNLIGL*INVNPFQISHSH 1133
SRNLIGL*+ P+ +HS+
Sbjct: 181 SRNLIGL*M*SVPWLRTHSN 240
Score = 142 bits (305), Expect(2) = 1e-033
Identities = 63/73 (86%), Positives = 67/73 (91%)
Frame = -2 / -1
Query: 1114 NGLTLIHKPMRFLDVVTPPSTTRLWPDIYLASSLARKSTASAMSLGLSVGPLSVARPLTT 935
+G IHKP+RFL+VVTPPSTTRLWP+IYL SSLARKSTASAMSLGLSVGPLSVA PLTT
Sbjct: 221 HGTDHIHKPIRFLEVVTPPSTTRLWPEIYLDSSLARKSTASAMSLGLSVGPLSVASPLTT 42
Query: 934 SSIFSTSWSLGTV 896
SSIFSTS SLGTV
Sbjct: 41 SSIFSTSSSLGTV 3
Score = 26.3 bits (51), Expect(2) = 2e-038
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = +2 / +1
Query: 1130 PWLG*LEKEREKTAISCT*SDRF 1198
PWL R + SCT*SDRF
Sbjct: 217 PWLRTHSN*RREKKSSCT*SDRF 285
Score = 22.6 bits (43), Expect(2) = 1e-033
Identities = 7/8 (87%), Positives = 8/8 (100%)
Frame = -1 / -2
Query: 1199 KIDHFKYN 1176
+IDHFKYN
Sbjct: 286 EIDHFKYN 263
>gb|BG357669.1|BG357669 OV2_32_G10.g1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA
sequence
Length = 660
Score = 124 bits (266), Expect(2) = 1e-037
Identities = 58/102 (56%), Positives = 63/102 (61%)
Frame = -2 / -3
Query: 841 PWRQALMSMGVATPKGETQLTRTPCARSSQAAFLVSPTMACLEAV*ACGPRPPSTAATLA 662
PW + M V T G+TQLTRTP SS A LVSPT ACL+AV ACGP PP ATLA
Sbjct: 346 PWGRCGMDSAVGTA*GDTQLTRTPWRPSSAATLLVSPTTACLDAVYACGPSPPMALATLA 167
Query: 661 TETMLPARRGAMARAACFIPSAAPSALTRSTRSNSAASKDRM 536
++TM P G M RAACFIP P L STR SA S RM
Sbjct: 166 SDTMEPRFCGIMTRAACFIPRNTPCTLMSSTRRTSAKSTARM 41
Score = 113 bits (242), Expect(2) = 6e-038
Identities = 51/102 (50%), Positives = 60/102 (58%)
Frame = +3 / +3
Query: 537 ILSFDAAEFDRVLRVNALGAALGMKHAARAMAPRRXXXXXXXXXXXXXXXXXXPHAYTAS 716
I + D AE RVL +N G LGMKHAAR M P++ PHAYTAS
Sbjct: 42 IRAVDFAEVRRVLDINVHGVFLGMKHAARVMIPQKRGSIVSLASVASAIGGLGPHAYTAS 221
Query: 717 KHAIVGLTKNAACELRAHGVRVNCVSPFGVATPMLINAWRQG 842
KHA+VGLTK+ A EL HGVRVNCVSP+ V T + + QG
Sbjct: 222 KHAVVGLTKSVAAELGRHGVRVNCVSPYAVPTALSMPHLPQG 347
Score = 66.1 bits (138), Expect(2) = 6e-038
Identities = 28/44 (63%), Positives = 34/44 (77%)
Frame = +3 / +3
Query: 939 VRGLATLKGPTLRPRDIAEAVLFLASDEARYISGHNLVVDGGVT 1070
V G A LKG P+D+A+AVL+LASDEARY+S NL+VDGG T
Sbjct: 387 VGGEANLKGVDAMPKDVAQAVLYLASDEARYVSALNLMVDGGFT 518
Score = 54.2 bits (112), Expect(2) = 1e-037
Identities = 28/48 (58%), Positives = 32/48 (66%)
Frame = -2 / -3
Query: 1081 FLDVVTPPSTTRLWPDIYLASSLARKSTASAMSLGLSVGPLSVARPLT 938
+L V PPST RL YLASSLAR STA A SLG++ PL +A P T
Sbjct: 529 WLTAVKPPSTMRLSALTYLASSLARYSTAWATSLGMASTPLRLASPPT 386
>gb|CW499023.1|CW499023 fsbb001f293j08f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f293j08, DNA
sequence
Length = 616
Score = 69.8 bits (146), Expect(4) = 2e-035
Identities = 29/50 (58%), Positives = 37/50 (74%)
Frame = +3 / -1
Query: 915 EVEKMEEVVRGLATLKGPTLRPRDIAEAVLFLASDEARYISGHNLVVDGG 1064
E E E+ + +A LKG LR DIA AVL++A D+ARYISGHNL++DGG
Sbjct: 175 EGEAFEQAMEAVANLKGVRLRVADIAAAVLYIARDDARYISGHNLLLDGG 26
Score = 64.8 bits (135), Expect(4) = 2e-035
Identities = 24/40 (60%), Positives = 30/40 (75%)
Frame = +3 / -1
Query: 699 HAYTASKHAIVGLTKNAACELRAHGVRVNCVSPFGVATPM 818
HAYT +K +V LT+NA+ EL HG+RVNCVSP ATP+
Sbjct: 316 HAYTCAKRGLVALTENASAELGRHGIRVNCVSPAAAATPL 197
Score = 39.6 bits (80), Expect(4) = 2e-035
Identities = 16/37 (43%), Positives = 22/37 (59%)
Frame = +3 / -1
Query: 525 AARSILSFDAAEFDRVLRVNALGAALGMKHAARAMAP 635
+ SI +F+RV+ VN +G +G KHAAR M P
Sbjct: 493 SCHSIRESTKEDFERVISVNLVGPFMGTKHAARVMVP 383
Score = 33.1 bits (66), Expect(4) = 2e-035
Identities = 13/24 (54%), Positives = 18/24 (75%)
Frame = +3 / -1
Query: 399 FVRCDVSVEDDVRRAVDWALSRHG 470
+V+CDV+VE DV AVD + +R G
Sbjct: 607 YVQCDVTVESDVAAAVDHSEARFG 536
>gb|CW199665.1|CW199665 104_624_11183633_148_36850_065 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11183633, DNA
sequence
Length = 712
Score = 81.3 bits (171), Expect(3) = 3e-023
Identities = 35/57 (61%), Positives = 39/57 (68%)
Frame = -2 / +1
Query: 814 GVATPKGETQLTRTPCARSSQAAFLVSPTMACLEAV*ACGPRPPSTAATLATETMLP 644
GVATP G+TQLTRTPC SS AA P+ ACL+AV GP PP + ATLA TM P
Sbjct: 259 GVATPPGDTQLTRTPCLPSSPAAARTRPSSACLDAVYDAGPNPPCSDATLAVHTMAP 429
Score = 71.2 bits (149), Expect(5) = 1e-034
Identities = 29/41 (70%), Positives = 34/41 (82%)
Frame = +3 / -3
Query: 696 PHAYTASKHAIVGLTKNAACELRAHGVRVNCVSPFGVATPM 818
P +YTASKHA++GL + AA EL HGVRVNCVSP GVATP+
Sbjct: 377 PASYTASKHALLGLVRAAAGELGRHGVRVNCVSPGGVATPL 255
Score = 64.3 bits (134), Expect(5) = 1e-034
Identities = 26/38 (68%), Positives = 31/38 (81%)
Frame = +3 / -3
Query: 957 LKGPTLRPRDIAEAVLFLASDEARYISGHNLVVDGGVT 1070
L+G LR D+AEA LFLASD+A +ISGHNLVVDG +T
Sbjct: 191 LQGKVLRADDVAEAALFLASDQAAFISGHNLVVDGAIT 78
Score = 44.6 bits (91), Expect(5) = 1e-034
Identities = 19/32 (59%), Positives = 23/32 (71%)
Frame = +3 / -3
Query: 534 SILSFDAAEFDRVLRVNALGAALGMKHAARAM 629
S++ D AE DRV+ VN GAA +KHAARAM
Sbjct: 551 SVMDMDLAELDRVMAVNFRGAAACVKHAARAM 456
Score = 38.6 bits (78), Expect(3) = 3e-023
Identities = 18/33 (54%), Positives = 21/33 (63%)
Frame = -2 / +1
Query: 646 PARRGAMARAACFIPSAAPSALTRSTRSNSAAS 548
P +ARAACF +AAP LT TRS+SA S
Sbjct: 439 PEPDATIARAACFTHAAAPRKLTAITRSSSARS 537
Score = 32.7 bits (65), Expect(3) = 3e-023
Identities = 20/39 (51%), Positives = 21/39 (53%)
Frame = -2 / +1
Query: 1078 LDVVTPPSTTRLWPDIYLASSLARKSTASAMSLGLSVGP 962
L V PSTTRL P + A S AR S ASA S S P
Sbjct: 70 LTAVMAPSTTRL*PLMKAAWSDARNSAASATSSARSTFP 186
Score = 25.4 bits (49), Expect(5) = 1e-034
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = +2 / -2
Query: 1052 RGRRRHHIQEPHRLVNQ 1102
R RRRHH ++P R ++
Sbjct: 99 RRRRRHHCRQPRRAADR 49
Score = 22.1 bits (42), Expect(5) = 1e-034
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = +3 / -3
Query: 474 RLDVYCNNAGVL 509
RLDV +NAGVL
Sbjct: 599 RLDVMMSNAGVL 564
>gb|CX607235.1|CX607235 ANR1_7_A06.g1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_7_A06_A002 5', mRNA sequence
Length = 816
Score = 93.2 bits (197), Expect(3) = 9e-026
Identities = 46/92 (50%), Positives = 51/92 (55%)
Frame = -2 / -3
Query: 823 MSMGVATPKGETQLTRTPCARSSQAAFLVSPTMACLEAV*ACGPRPPSTAATLATETMLP 644
++ GV GE LTRTP A PT A LE * G PSTA LA + MLP
Sbjct: 739 IASGVGIACGEMALTRTPERAICPATARTIPTTATLETQ*GVGAMSPSTAVVLAVQMMLP 560
Query: 643 ARRGAMARAACFIPSAAPSALTRSTRSNSAAS 548
RRG M RAACF P++ P ALT TRS SA S
Sbjct: 559 VRRGTMTRAACFTPASTPRALTAMTRSKSARS 464
Score = 92.7 bits (196), Expect(4) = 5e-034
Identities = 41/105 (39%), Positives = 55/105 (52%)
Frame = +3 / +3
Query: 525 AARSILSFDAAEFDRVLRVNALGAALGMKHAARAMAPRRXXXXXXXXXXXXXXXXXXPHA 704
AA S+ + D A+FDRV+ VNA G G+KHAAR M PRR P
Sbjct: 441 AASSLGAIDLADFDRVMAVNARGVLAGVKHAARVMVPRRTGSIICTASTTAVLGDMAPTP 620
Query: 705 YTASKHAIVGLTKNAACELRAHGVRVNCVSPFGVATPMLINAWRQ 839
Y SK A+VG+ + A ++ GVRVN +SP + TP+ + Q
Sbjct: 621 YCVSKVAVVGIVRAVAGQMARSGVRVNAISPHAIPTPLAMATMAQ 755
Score = 52.8 bits (109), Expect(4) = 5e-034
Identities = 23/50 (46%), Positives = 31/50 (62%)
Frame = +3 / +3
Query: 237 KRLDGKVAIVTGGARGIGEAIVRLFAKHGARXXXXXXXXXXGEALASALG 386
+RL GKVA++TGGA GIG+A F ++GAR G A+A+ LG
Sbjct: 159 QRLAGKVAVITGGASGIGKATAAEFVRNGARVIIADVQDDLGHAVATELG 308
Score = 45.1 bits (92), Expect(3) = 9e-026
Identities = 19/31 (61%), Positives = 22/31 (70%)
Frame = -2 / -3
Query: 331 TRAPCLANSRTMASPIPRAPPVTMATFPSSL 239
T AP L NS +A PIP APPV ATFP++L
Sbjct: 253 TLAPFLTNSAAVAFPIPLAPPVITATFPANL 161
Score = 31.3 bits (62), Expect(4) = 5e-034
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = +3 / +3
Query: 393 VSFVRCDVSVEDDVRRAVDWALSRHG 470
V + RCDV+ E V AVD A+ HG
Sbjct: 318 VRYTRCDVTDEAQVAAAVDLAVQLHG 395
Score = 25.4 bits (49), Expect(4) = 5e-034
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = +3 / +3
Query: 471 GRLDVYCNNAGVLG 512
GRLDV NNAG+ G
Sbjct: 393 GRLDVMYNNAGIGG 434
Score = 23.5 bits (45), Expect(3) = 9e-026
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = -2 / -3
Query: 511 PSTPALLQ*TSRRP 470
P PALL TSRRP
Sbjct: 433 PPMPALLYITSRRP 392
>gb|CN149285.1|CN149285 WOUND1_61_G04.g1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_61_G04_A002 5', mRNA sequence
Length = 776
Score = 93.2 bits (197), Expect(3) = 9e-026
Identities = 46/92 (50%), Positives = 51/92 (55%)
Frame = -2 / -2
Query: 823 MSMGVATPKGETQLTRTPCARSSQAAFLVSPTMACLEAV*ACGPRPPSTAATLATETMLP 644
++ GV GE LTRTP A PT A LE * G PSTA LA + MLP
Sbjct: 700 IASGVGIACGEMALTRTPERAICPATARTIPTTATLETQ*GVGAMSPSTAVVLAVQMMLP 521
Query: 643 ARRGAMARAACFIPSAAPSALTRSTRSNSAAS 548
RRG M RAACF P++ P ALT TRS SA S
Sbjct: 520 VRRGTMTRAACFTPASTPRALTAMTRSKSARS 425
Score = 92.3 bits (195), Expect(4) = 7e-034
Identities = 40/98 (40%), Positives = 53/98 (54%)
Frame = +3 / +3
Query: 525 AARSILSFDAAEFDRVLRVNALGAALGMKHAARAMAPRRXXXXXXXXXXXXXXXXXXPHA 704
AA S+ + D A+FDRV+ VNA G G+KHAAR M PRR P
Sbjct: 402 AASSLGAIDLADFDRVMAVNARGVLAGVKHAARVMVPRRTGSIICTASTTAVLGDMAPTP 581
Query: 705 YTASKHAIVGLTKNAACELRAHGVRVNCVSPFGVATPM 818
Y SK A+VG+ + A ++ GVRVN +SP + TP+
Sbjct: 582 YCVSKVAVVGIVRAVAGQMARSGVRVNAISPHAIPTPL 695
Score = 52.8 bits (109), Expect(4) = 7e-034
Identities = 23/50 (46%), Positives = 31/50 (62%)
Frame = +3 / +3
Query: 237 KRLDGKVAIVTGGARGIGEAIVRLFAKHGARXXXXXXXXXXGEALASALG 386
+RL GKVA++TGGA GIG+A F ++GAR G A+A+ LG
Sbjct: 120 QRLAGKVAVITGGASGIGKATAAEFVRNGARVIIADVQDDLGHAVATELG 269
Score = 45.1 bits (92), Expect(3) = 9e-026
Identities = 19/31 (61%), Positives = 22/31 (70%)
Frame = -2 / -2
Query: 331 TRAPCLANSRTMASPIPRAPPVTMATFPSSL 239
T AP L NS +A PIP APPV ATFP++L
Sbjct: 214 TLAPFLTNSAAVAFPIPLAPPVITATFPANL 122
Score = 31.3 bits (62), Expect(4) = 7e-034
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = +3 / +3
Query: 393 VSFVRCDVSVEDDVRRAVDWALSRHG 470
V + RCDV+ E V AVD A+ HG
Sbjct: 279 VRYTRCDVTDEAQVAAAVDLAVQLHG 356
Score = 25.4 bits (49), Expect(4) = 7e-034
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = +3 / +3
Query: 471 GRLDVYCNNAGVLG 512
GRLDV NNAG+ G
Sbjct: 354 GRLDVMYNNAGIGG 395
Score = 23.5 bits (45), Expect(3) = 9e-026
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = -2 / -2
Query: 511 PSTPALLQ*TSRRP 470
P PALL TSRRP
Sbjct: 394 PPMPALLYITSRRP 353
>gb|CN148035.1|CN148035 WOUND1_53_G05.g1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_53_G05_A002 5', mRNA sequence
Length = 799
Score = 89.5 bits (189), Expect(3) = 1e-024
Identities = 45/92 (48%), Positives = 50/92 (54%)
Frame = -2 / -2
Query: 823 MSMGVATPKGETQLTRTPCARSSQAAFLVSPTMACLEAV*ACGPRPPSTAATLATETMLP 644
++ GV E LTRTP A PT A LE * G PSTA LA + MLP
Sbjct: 753 IASGVGIACEEMALTRTPERAICPATARTIPTTATLETQ*GVGAMSPSTAVVLAVQMMLP 574
Query: 643 ARRGAMARAACFIPSAAPSALTRSTRSNSAAS 548
RRG M RAACF P++ P ALT TRS SA S
Sbjct: 573 VRRGTMTRAACFTPASTPRALTAMTRSKSARS 478
Score = 89.0 bits (188), Expect(4) = 6e-033
Identities = 40/105 (38%), Positives = 54/105 (51%)
Frame = +3 / +2
Query: 525 AARSILSFDAAEFDRVLRVNALGAALGMKHAARAMAPRRXXXXXXXXXXXXXXXXXXPHA 704
AA S+ + D A+FDRV+ VNA G G+KHAAR M PRR P
Sbjct: 455 AASSLGAIDLADFDRVMAVNARGVLAGVKHAARVMVPRRTGSIICTASTTAVLGDMAPTP 634
Query: 705 YTASKHAIVGLTKNAACELRAHGVRVNCVSPFGVATPMLINAWRQ 839
Y SK A+VG+ + A ++ GVRVN +S + TP+ + Q
Sbjct: 635 YCVSKVAVVGIVRAVAGQMARSGVRVNAISSHAIPTPLAMATMAQ 769
Score = 52.8 bits (109), Expect(4) = 6e-033
Identities = 23/50 (46%), Positives = 31/50 (62%)
Frame = +3 / +2
Query: 237 KRLDGKVAIVTGGARGIGEAIVRLFAKHGARXXXXXXXXXXGEALASALG 386
+RL GKVA++TGGA GIG+A F ++GAR G A+A+ LG
Sbjct: 173 QRLAGKVAVITGGASGIGKATAAEFVRNGARVIIADVQDDLGHAVATELG 322
Score = 45.1 bits (92), Expect(3) = 1e-024
Identities = 19/31 (61%), Positives = 22/31 (70%)
Frame = -2 / -2
Query: 331 TRAPCLANSRTMASPIPRAPPVTMATFPSSL 239
T AP L NS +A PIP APPV ATFP++L
Sbjct: 267 TLAPFLTNSAAVAFPIPLAPPVITATFPANL 175
Score = 31.3 bits (62), Expect(4) = 6e-033
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = +3 / +2
Query: 393 VSFVRCDVSVEDDVRRAVDWALSRHG 470
V + RCDV+ E V AVD A+ HG
Sbjct: 332 VRYTRCDVTDEAQVAAAVDLAVQLHG 409
Score = 25.4 bits (49), Expect(4) = 6e-033
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = +3 / +2
Query: 471 GRLDVYCNNAGVLG 512
GRLDV NNAG+ G
Sbjct: 407 GRLDVMYNNAGIGG 448
Score = 23.5 bits (45), Expect(3) = 1e-024
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = -2 / -2
Query: 511 PSTPALLQ*TSRRP 470
P PALL TSRRP
Sbjct: 447 PPMPALLYITSRRP 406
>gb|CW260769.1|CW260769 104_727_11229143_116_35195_086 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11229143, DNA
sequence
Length = 597
Score = 93.6 bits (198), Expect(2) = 3e-024
Identities = 46/85 (54%), Positives = 50/85 (58%)
Frame = -2 / -2
Query: 802 PKGETQLTRTPCARSSQAAFLVSPTMACLEAV*ACGPRPPSTAATLATETMLPARRGAMA 623
P GE LTRTP +S P A LEA+ A G R PST A L + MLPARRGAM
Sbjct: 590 P*GEMALTRTPERATSADTARTMPRTAALEALYAAGARLPSTPAVLPVQMMLPARRGAMT 411
Query: 622 RAACFIPSAAPSALTRSTRSNSAAS 548
RAACF P+ P ALT TRS S S
Sbjct: 410 RAACFTPATTPLALTAMTRSKSPRS 336
Score = 89.5 bits (189), Expect(4) = 8e-033
Identities = 37/86 (43%), Positives = 49/86 (56%)
Frame = +3 / +1
Query: 549 DAAEFDRVLRVNALGAALGMKHAARAMAPRRXXXXXXXXXXXXXXXXXXPHAYTASKHAI 728
D +FDRV+ VNA G G+KHAAR MAPRR P AY+ASK A+
Sbjct: 337 DLGDFDRVMAVNARGVVAGVKHAARVMAPRRAGSIICTGSTAGVLGSLAPAAYSASKAAV 516
Query: 729 VGLTKNAACELRAHGVRVNCVSPFGV 806
+G+ + + E+ GVRVN +SP G+
Sbjct: 517 LGIVRAVSAEVARSGVRVNAISPHGI 594
Score = 54.2 bits (112), Expect(4) = 8e-033
Identities = 23/53 (43%), Positives = 32/53 (60%)
Frame = +3 / +1
Query: 240 RLDGKVAIVTGGARGIGEAIVRLFAKHGARXXXXXXXXXXGEALASALGPQVS 398
RL GKVA++TGGA GIG+A F ++GAR G ++A+ LGP +
Sbjct: 34 RLIGKVAVITGGASGIGKATAAEFVRNGARVIIADVQDGLGHSVAAQLGPDAA 192
Score = 42.8 bits (87), Expect(2) = 3e-024
Identities = 21/50 (42%), Positives = 25/50 (50%)
Frame = -2 / -2
Query: 388 GPXXXXXXXXXXXXXXAITTRAPCLANSRTMASPIPRAPPVTMATFPSSL 239
GP A+ T AP L NS +A P+P APPV ATFP +L
Sbjct: 182 GPSWAATEWPRPSWTSAMMTLAPFLTNSAAVAFPMPLAPPVITATFPINL 33
Score = 29.0 bits (57), Expect(4) = 8e-033
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +3 / +1
Query: 399 FVRCDVSVEDDVRRAVDWALSRHG 470
+V CDV+ E V AVD A+ HG
Sbjct: 196 YVHCDVTDEAQVAAAVDLAVEVHG 267
Score = 25.4 bits (49), Expect(4) = 8e-033
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = +3 / +1
Query: 471 GRLDVYCNNAGVLG 512
GRLDV NNAG+ G
Sbjct: 265 GRLDVMFNNAGIGG 306
>gb|CW224533.1|CW224533 104_660_11203494_148_37445_017 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11203494, DNA
sequence
Length = 616
Score = 94.1 bits (199), Expect(2) = 3e-032
Identities = 41/88 (46%), Positives = 51/88 (57%)
Frame = +3 / -1
Query: 561 FDRVLRVNALGAALGMKHAARAMAPRRXXXXXXXXXXXXXXXXXXPHAYTASKHAIVGLT 740
FDRV+ +NA G G+KHAAR MAPRR PH Y+ SK A+VGL
Sbjct: 616 FDRVMAINARGVVAGVKHAARVMAPRRRGSIICTASIAGVLGSITPHPYSVSKAAVVGLV 437
Query: 741 KNAACELRAHGVRVNCVSPFGVATPMLI 824
+ A EL GVRVN VSP +ATP+++
Sbjct: 436 RAVAGELARSGVRVNAVSPNYIATPLVM 353
Score = 93.2 bits (197), Expect(2) = 4e-025
Identities = 47/87 (54%), Positives = 51/87 (58%)
Frame = -2 / +3
Query: 823 MSMGVATPKGETQLTRTPCARSSQAAFLVSPTMACLEAV*ACGPRPPSTAATLATETMLP 644
M+ GVA GET LTRTP SS A SPT A LE +* G PST A LA + MLP
Sbjct: 354 MTSGVAM*FGETALTRTPERASSPATARTSPTTAALETL*GWGVMDPSTPAMLAVQMMLP 533
Query: 643 ARRGAMARAACFIPSAAPSALTRSTRS 563
RRGAM AAC P+ P AL TRS
Sbjct: 534 RRRGAMTLAACLTPATTPRALIAMTRS 614
Score = 66.6 bits (139), Expect(2) = 3e-032
Identities = 24/48 (50%), Positives = 36/48 (75%)
Frame = +3 / -1
Query: 936 VVRGLATLKGPTLRPRDIAEAVLFLASDEARYISGHNLVVDGGVTTSR 1079
V + + ++G L+P D+A A L+LASDE++Y++GHNLVVDGG T +
Sbjct: 298 VEKSINEMEGVVLQPEDVARAALYLASDESKYVNGHNLVVDGGFTVGK 155
Score = 43.7 bits (89), Expect(2) = 4e-025
Identities = 25/52 (48%), Positives = 29/52 (55%)
Frame = -2 / +3
Query: 1069 VTPPSTTRLWPDIYLASSLARKSTASAMSLGLSVGPLSVARPLTTSSIFSTS 914
V PPSTTRL P YL SS AR S A A S G S P +T S+ S++
Sbjct: 165 VNPPSTTRLCPLTYLDSSDARYSAALATSSGWSTTPSISLMLFSTMSLCSSA 320
>gb|CW289716.1|CW289716 104_768_11412628_148_35550_004 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11412628, DNA
sequence
Length = 244
Score = 118 bits (252), Expect(2) = 3e-031
Identities = 52/65 (80%), Positives = 53/65 (81%)
Frame = +3 / +2
Query: 243 LDGKVAIVTGGARGIGEAIVRLFAKHGARXXXXXXXXXXGEALASALGPQVSFVRCDVSV 422
LDGKVAIVTGGARGIGEAIVRLF KHGAR GEALASALGP VSFVRCDVSV
Sbjct: 2 LDGKVAIVTGGARGIGEAIVRLFVKHGARVVIADIDDAAGEALASALGPHVSFVRCDVSV 181
Query: 423 EDDVR 437
E+DVR
Sbjct: 182 EEDVR 196
Score = 112 bits (239), Expect = 1e-023
Identities = 46/64 (71%), Positives = 48/64 (75%)
Frame = -1 / -1
Query: 434 DVVLHGHVAAHEADXXXXXXXXXXXRGVVDVRDHHPGPVLGEQPHDGLADPARAARHNGH 255
+V+LH HVAAHEAD GVVDVRDHHPGPVL EQPHDGLAD RAARHNGH
Sbjct: 193 NVLLHRHVAAHEADMRAQRRRQRLPGGVVDVRDHHPGPVLHEQPHDGLADAPRAARHNGH 14
Query: 254 LPVQ 243
LPVQ
Sbjct: 13 LPVQ 2
Score = 39.1 bits (79), Expect(2) = 3e-031
Identities = 14/15 (93%), Positives = 15/15 (100%)
Frame = +3 / +3
Query: 438 RAVDWALSRHGGRLD 482
RA+DWALSRHGGRLD
Sbjct: 198 RALDWALSRHGGRLD 242
>gb|CW135684.1|CW135684 104_520_11117978_116_34839_009 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11117978, DNA
sequence
Length = 684
Score = 92.3 bits (195), Expect(4) = 3e-031
Identities = 41/90 (45%), Positives = 50/90 (55%)
Frame = +3 / -2
Query: 561 FDRVLRVNALGAALGMKHAARAMAPRRXXXXXXXXXXXXXXXXXXPHAYTASKHAIVGLT 740
FDRV+ VNA G G+KHAAR M PRR P AYTASK A+VGL
Sbjct: 278 FDRVVAVNARGVLAGVKHAARVMLPRRGGSIICTASTTSLLGGILPPAYTASKAAVVGLV 99
Query: 741 KNAACELRAHGVRVNCVSPFGVATPMLINA 830
+ A E+ GVRVN +SP + TP+ + A
Sbjct: 98 RAVAAEVARSGVRVNAISPHAIPTPLTMAA 9
Score = 91.3 bits (193), Expect(3) = 2e-025
Identities = 44/89 (49%), Positives = 52/89 (58%)
Frame = -2 / +1
Query: 829 ALMSMGVATPKGETQLTRTPCARSSQAAFLVSPTMACLEAV*ACGPRPPSTAATLATETM 650
A + GV GE LTRTP +S A PT A LEAV A G PP+ LA + M
Sbjct: 10 AAIVSGVGMACGEMALTRTPERATSAATARTRPTTAALEAVYAGGSMPPNREVVLAVQMM 189
Query: 649 LPARRGAMARAACFIPSAAPSALTRSTRS 563
LP RRG+M RAAC P++ P ALT +TRS
Sbjct: 190 LPPRRGSMTRAACLTPASTPRALTATTRS 276
Score = 42.3 bits (86), Expect(4) = 3e-031
Identities = 17/30 (56%), Positives = 22/30 (73%)
Frame = +3 / -1
Query: 240 RLDGKVAIVTGGARGIGEAIVRLFAKHGAR 329
RL GKVA++TG A GIG+A F ++GAR
Sbjct: 561 RLAGKVAVITGAASGIGKATAAEFVRNGAR 472
Score = 41.4 bits (84), Expect(3) = 2e-025
Identities = 18/31 (58%), Positives = 21/31 (67%)
Frame = -2 / +2
Query: 331 TRAPCLANSRTMASPIPRAPPVTMATFPSSL 239
T AP L NS +A PIP A PV ATFP++L
Sbjct: 470 TLAPFLTNSAAVAFPIPLAAPVMTATFPANL 562
Score = 29.9 bits (59), Expect(4) = 3e-031
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +3 / -1
Query: 399 FVRCDVSVEDDVRRAVDWALSRHG 470
+ RCDV+ E V AVD A+ HG
Sbjct: 432 YTRCDVTDEAQVAAAVDLAVGLHG 361
Score = 28.1 bits (55), Expect(4) = 3e-031
Identities = 12/17 (70%), Positives = 12/17 (70%)
Frame = +3 / -1
Query: 471 GRLDVYCNNAGVLGRQT 521
GRLDV NNAGV G T
Sbjct: 363 GRLDVMFNNAGVFGDVT 313
Score = 27.6 bits (54), Expect(3) = 2e-025
Identities = 12/17 (70%), Positives = 12/17 (70%)
Frame = -2 / +2
Query: 520 VWRPSTPALLQ*TSRRP 470
V P TPALL TSRRP
Sbjct: 314 VTSPKTPALLNMTSRRP 364
>gb|CW222650.1|CW222650 104_658_11202489_148_37178_043 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11202489, DNA
sequence
Length = 675
Score = 93.2 bits (197), Expect(2) = 3e-024
Identities = 46/92 (50%), Positives = 51/92 (55%)
Frame = -2 / +3
Query: 823 MSMGVATPKGETQLTRTPCARSSQAAFLVSPTMACLEAV*ACGPRPPSTAATLATETMLP 644
++ GV GE LTRTP A PT A LE * G PSTA LA + MLP
Sbjct: 348 IASGVGIACGEMALTRTPERAICPATARTIPTTATLETQ*GVGAMSPSTAVVLAVQMMLP 527
Query: 643 ARRGAMARAACFIPSAAPSALTRSTRSNSAAS 548
RRG M RAACF P++ P ALT TRS SA S
Sbjct: 528 VRRGTMTRAACFTPASTPRALTAMTRSKSARS 623
Score = 90.4 bits (191), Expect(2) = 1e-030
Identities = 40/105 (38%), Positives = 54/105 (51%)
Frame = +3 / -3
Query: 525 AARSILSFDAAEFDRVLRVNALGAALGMKHAARAMAPRRXXXXXXXXXXXXXXXXXXPHA 704
A S+ + D A+FDRV+ VNA G G+KHAAR M PRR P
Sbjct: 646 ARSSLGAIDLADFDRVMAVNARGVLAGVKHAARVMVPRRTGSIICTASTTAVLGDMAPTP 467
Query: 705 YTASKHAIVGLTKNAACELRAHGVRVNCVSPFGVATPMLINAWRQ 839
Y SK A+VG+ + A ++ GVRVN +SP + TP+ + Q
Sbjct: 466 YCVSKVAVVGIVRAVAGQMARSGVRVNAISPHAIPTPLAMATMAQ 332
Score = 65.2 bits (136), Expect(2) = 1e-030
Identities = 26/48 (54%), Positives = 34/48 (70%)
Frame = +3 / -3
Query: 942 RGLATLKGPTLRPRDIAEAVLFLASDEARYISGHNLVVDGGVTTSRNL 1085
R + + GP L DIA A ++LASDEA+Y++G NLVVDGG T S+ L
Sbjct: 286 RDMNEMAGPVLEAEDIARAAVYLASDEAKYVNGQNLVVDGGYTVSKAL 143
Score = 43.7 bits (89), Expect(2) = 3e-024
Identities = 22/36 (61%), Positives = 23/36 (63%)
Frame = -2 / +3
Query: 1069 VTPPSTTRLWPDIYLASSLARKSTASAMSLGLSVGP 962
V PPSTTR P YLASS AR + A AMS S GP
Sbjct: 159 VYPPSTTRFCPFTYLASSDAR*TAALAMSSASSTGP 266
>gb|CX607145.1|CX607145 ANR1_7_A06.b1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_7_A06_A002 3', mRNA sequence
Length = 686
Score = 93.2 bits (197), Expect(2) = 3e-024
Identities = 46/92 (50%), Positives = 51/92 (55%)
Frame = -2 / -3
Query: 823 MSMGVATPKGETQLTRTPCARSSQAAFLVSPTMACLEAV*ACGPRPPSTAATLATETMLP 644
++ GV GE LTRTP A PT A LE * G PSTA LA + MLP
Sbjct: 285 IASGVGIACGEMALTRTPERAICPATARTIPTTATLETQ*GVGAMSPSTAVVLAVQMMLP 106
Query: 643 ARRGAMARAACFIPSAAPSALTRSTRSNSAAS 548
RRG M RAACF P++ P ALT TRS SA S
Sbjct: 105 VRRGTMTRAACFTPASTPRALTAMTRSKSARS 10
Score = 88.6 bits (187), Expect(2) = 4e-030
Identities = 38/99 (38%), Positives = 51/99 (51%)
Frame = +3 / +2
Query: 543 SFDAAEFDRVLRVNALGAALGMKHAARAMAPRRXXXXXXXXXXXXXXXXXXPHAYTASKH 722
+ D A+FDRV+ VNA G G+KHAAR M PRR P Y SK
Sbjct: 5 AIDLADFDRVMAVNARGVLAGVKHAARVMVPRRTGSIICTASTTAVLGDMAPTPYCVSKV 184
Query: 723 AIVGLTKNAACELRAHGVRVNCVSPFGVATPMLINAWRQ 839
A+VG+ + A ++ GVRVN +SP + TP+ + Q
Sbjct: 185 AVVGIVRAVAGQMARSGVRVNAISPHAIPTPLAMATMAQ 301
Score = 65.2 bits (136), Expect(2) = 4e-030
Identities = 26/48 (54%), Positives = 34/48 (70%)
Frame = +3 / +2
Query: 942 RGLATLKGPTLRPRDIAEAVLFLASDEARYISGHNLVVDGGVTTSRNL 1085
R + + GP L DIA A ++LASDEA+Y++G NLVVDGG T S+ L
Sbjct: 347 RDMNEMAGPVLEAEDIARAAVYLASDEAKYVNGQNLVVDGGYTVSKAL 490
Score = 43.7 bits (89), Expect(2) = 3e-024
Identities = 22/36 (61%), Positives = 23/36 (63%)
Frame = -2 / -3
Query: 1069 VTPPSTTRLWPDIYLASSLARKSTASAMSLGLSVGP 962
V PPSTTR P YLASS AR + A AMS S GP
Sbjct: 474 VYPPSTTRFCPFTYLASSDAR*TAALAMSSASSTGP 367
>gb|CW325782.1|CW325782 104_820_11477874_116_35926_065 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11477874, DNA
sequence
Length = 613
Score = 68.0 bits (142), Expect(4) = 5e-030
Identities = 25/50 (50%), Positives = 38/50 (76%)
Frame = +3 / -3
Query: 936 VVRGLATLKGPTLRPRDIAEAVLFLASDEARYISGHNLVVDGGVTTSRNL 1085
V G++ L+G L+ D+A A ++LASDEA++++GHNLVVDGG T S+ +
Sbjct: 155 VETGMSELRGAVLQVEDVARAAVYLASDEAKFVTGHNLVVDGGFTASKRI 6
Score = 48.7 bits (100), Expect(4) = 5e-030
Identities = 19/47 (40%), Positives = 29/47 (61%)
Frame = +3 / -3
Query: 705 YTASKHAIVGLTKNAACELRAHGVRVNCVSPFGVATPMLINAWRQGH 845
Y+ SK ++ + + AA EL GVRVN +SP +ATP+L+ + H
Sbjct: 329 YSLSKATVISVVRAAADELARSGVRVNAISPHAIATPLLVRGLARLH 189
Score = 48.3 bits (99), Expect(4) = 5e-030
Identities = 20/38 (52%), Positives = 24/38 (63%)
Frame = +3 / -3
Query: 525 AARSILSFDAAEFDRVLRVNALGAALGMKHAARAMAPR 638
A + S D A+FDRV+ VNA A +KHAAR M PR
Sbjct: 509 APAPLASLDLADFDRVMAVNARSAVAALKHAARVMVPR 396
Score = 23.5 bits (45), Expect(4) = 5e-030
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +3 / -3
Query: 414 VSVEDDVRRAVDWALSRHGGRLDVYCN 494
V+ E + AVD A++RHG +Y N
Sbjct: 611 VTDEAQIAAAVDLAVARHGRLDVLYSN 531
>gb|CW338136.1|CW338136 104_838_11484582_148_36124_025 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11484582, DNA
sequence
Length = 631
Score = 89.0 bits (188), Expect(3) = 7e-025
Identities = 42/85 (49%), Positives = 50/85 (58%)
Frame = -2 / -1
Query: 796 GETQLTRTPCARSSQAAFLVSPTMACLEAV*ACGPRPPSTAATLATETMLPARRGAMARA 617
GE LTRTP +S PT A LEAV A G PP+ LA + MLP RRG+M RA
Sbjct: 616 GEMALTRTPERATSAVTARTRPTTAALEAVYAGGSMPPNKEVVLAVQMMLPPRRGSMTRA 437
Query: 616 ACFIPSAAPSALTRSTRSNSAASKD 542
AC P++ P ALT +TRS S S +
Sbjct: 436 ACLTPASTPRALTATTRSKSWRSME 362
Score = 87.7 bits (185), Expect(4) = 7e-030
Identities = 39/88 (44%), Positives = 47/88 (53%)
Frame = +3 / +3
Query: 543 SFDAAEFDRVLRVNALGAALGMKHAARAMAPRRXXXXXXXXXXXXXXXXXXPHAYTASKH 722
S D +FDRV+ VNA G G+KHAAR M PRR P AYTASK
Sbjct: 363 SIDLHDFDRVVAVNARGVLAGVKHAARVMLPRRGGSIICTASTTSLLGGILPPAYTASKA 542
Query: 723 AIVGLTKNAACELRAHGVRVNCVSPFGV 806
A+VGL + E+ GVRVN +SP +
Sbjct: 543 AVVGLVRAVTAEVARSGVRVNAISPHAI 626
Score = 42.3 bits (86), Expect(4) = 7e-030
Identities = 17/30 (56%), Positives = 22/30 (73%)
Frame = +3 / +3
Query: 240 RLDGKVAIVTGGARGIGEAIVRLFAKHGAR 329
RL GKVA++TG A GIG+A F ++GAR
Sbjct: 99 RLAGKVAVITGAASGIGKATAAEFVRNGAR 188
Score = 41.4 bits (84), Expect(3) = 7e-025
Identities = 18/31 (58%), Positives = 21/31 (67%)
Frame = -2 / -1
Query: 331 TRAPCLANSRTMASPIPRAPPVTMATFPSSL 239
T AP L NS +A PIP A PV ATFP++L
Sbjct: 190 TLAPFLTNSAAVAFPIPLAAPVMTATFPANL 98
Score = 29.9 bits (59), Expect(4) = 7e-030
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +3 / +3
Query: 399 FVRCDVSVEDDVRRAVDWALSRHG 470
+ RCDV+ E V AVD A+ HG
Sbjct: 228 YTRCDVTDEAQVAAAVDLAVGLHG 299
Score = 28.1 bits (55), Expect(4) = 7e-030
Identities = 12/17 (70%), Positives = 12/17 (70%)
Frame = +3 / +3
Query: 471 GRLDVYCNNAGVLGRQT 521
GRLDV NNAGV G T
Sbjct: 297 GRLDVMFNNAGVFGDVT 347
Score = 27.6 bits (54), Expect(3) = 7e-025
Identities = 12/17 (70%), Positives = 12/17 (70%)
Frame = -2 / -1
Query: 520 VWRPSTPALLQ*TSRRP 470
V P TPALL TSRRP
Sbjct: 346 VTSPKTPALLNMTSRRP 296
>gb|CN142049.1|CN142049 WOUND1_3_C03.g1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_3_C03_A002 5', mRNA sequence
Length = 729
Score = 84.5 bits (178), Expect(3) = 3e-023
Identities = 41/78 (52%), Positives = 44/78 (56%)
Frame = -2 / -2
Query: 781 TRTPCARSSQAAFLVSPTMACLEAV*ACGPRPPSTAATLATETMLPARRGAMARAACFIP 602
TRTP A PT A LE * G PSTA LA + MLP RRG M RAACF P
Sbjct: 728 TRTPERAICPATARTIPTTATLETQ*GVGAMSPSTAVVLAVQMMLPVRRGTMTRAACFTP 549
Query: 601 SAAPSALTRSTRSNSAAS 548
++ P ALT TRS SA S
Sbjct: 548 ASTPRALTAMTRSKSARS 495
Score = 76.2 bits (160), Expect(4) = 3e-029
Identities = 35/86 (40%), Positives = 45/86 (52%)
Frame = +3 / +1
Query: 525 AARSILSFDAAEFDRVLRVNALGAALGMKHAARAMAPRRXXXXXXXXXXXXXXXXXXPHA 704
AA S+ + D A+FDRV+ VNA G G+KHAAR M PRR P
Sbjct: 472 AASSLGAIDLADFDRVMAVNARGVLAGVKHAARVMVPRRTGSIICTASTTAVLGDMAPTP 651
Query: 705 YTASKHAIVGLTKNAACELRAHGVRV 782
Y SK A+VG+ + A ++ GVRV
Sbjct: 652 YCVSKVAVVGIVRAVAGQMARSGVRV 729
Score = 52.8 bits (109), Expect(4) = 3e-029
Identities = 23/50 (46%), Positives = 31/50 (62%)
Frame = +3 / +1
Query: 237 KRLDGKVAIVTGGARGIGEAIVRLFAKHGARXXXXXXXXXXGEALASALG 386
+RL GKVA++TGGA GIG+A F ++GAR G A+A+ LG
Sbjct: 190 QRLAGKVAVITGGASGIGKATAAEFVRNGARVIIADVQDDLGHAVATELG 339
Score = 45.1 bits (92), Expect(3) = 3e-023
Identities = 19/31 (61%), Positives = 22/31 (70%)
Frame = -2 / -2
Query: 331 TRAPCLANSRTMASPIPRAPPVTMATFPSSL 239
T AP L NS +A PIP APPV ATFP++L
Sbjct: 284 TLAPFLTNSAAVAFPIPLAPPVITATFPANL 192
Score = 31.3 bits (62), Expect(4) = 3e-029
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = +3 / +1
Query: 393 VSFVRCDVSVEDDVRRAVDWALSRHG 470
V + RCDV+ E V AVD A+ HG
Sbjct: 349 VRYTRCDVTDEAQVAAAVDLAVQLHG 426
Score = 25.4 bits (49), Expect(4) = 3e-029
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = +3 / +1
Query: 471 GRLDVYCNNAGVLG 512
GRLDV NNAG+ G
Sbjct: 424 GRLDVMYNNAGIGG 465
Score = 23.5 bits (45), Expect(3) = 3e-023
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = -2 / -2
Query: 511 PSTPALLQ*TSRRP 470
P PALL TSRRP
Sbjct: 464 PPMPALLYITSRRP 423
>gb|CW273536.1|CW273536 104_746_11403953_148_35366_077 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11403953, DNA
sequence
Length = 616
Score = 88.1 bits (186), Expect(2) = 1e-023
Identities = 44/81 (54%), Positives = 48/81 (59%)
Frame = -2 / +2
Query: 823 MSMGVATPKGETQLTRTPCARSSQAAFLVSPTMACLEAV*ACGPRPPSTAATLATETMLP 644
M+ GVA GET LTRTP SS A SPT A LE +* G PST A LA + MLP
Sbjct: 347 MTSGVAM*FGETALTRTPERASSPATARTSPTTAALETL*GWGVMDPSTPAMLAVQMMLP 526
Query: 643 ARRGAMARAACFIPSAAPSAL 581
RRGAM AAC P+ P AL
Sbjct: 527 RRRGAMTLAACLTPATTPRAL 589
Score = 84.0 bits (177), Expect(2) = 3e-029
Identities = 37/82 (45%), Positives = 46/82 (56%)
Frame = +3 / -2
Query: 579 VNALGAALGMKHAARAMAPRRXXXXXXXXXXXXXXXXXXPHAYTASKHAIVGLTKNAACE 758
+NA G G+KHAAR MAPRR PH Y+ SK A+VGL + A E
Sbjct: 591 INARGVVAGVKHAARVMAPRRRGSIICTASIAGVLGSITPHPYSVSKAAVVGLVRAVAGE 412
Query: 759 LRAHGVRVNCVSPFGVATPMLI 824
L GVRVN VSP +ATP+++
Sbjct: 411 LARSGVRVNAVSPNYIATPLVM 346
Score = 66.6 bits (139), Expect(2) = 3e-029
Identities = 24/48 (50%), Positives = 36/48 (75%)
Frame = +3 / -2
Query: 936 VVRGLATLKGPTLRPRDIAEAVLFLASDEARYISGHNLVVDGGVTTSR 1079
V + + ++G L+P D+A A L+LASDE++Y++GHNLVVDGG T +
Sbjct: 291 VEKSINEMEGVVLQPEDVARAALYLASDESKYVNGHNLVVDGGFTVGK 148
Score = 43.7 bits (89), Expect(2) = 1e-023
Identities = 25/52 (48%), Positives = 29/52 (55%)
Frame = -2 / +2
Query: 1069 VTPPSTTRLWPDIYLASSLARKSTASAMSLGLSVGPLSVARPLTTSSIFSTS 914
V PPSTTRL P YL SS AR S A A S G S P +T S+ S++
Sbjct: 158 VNPPSTTRLCPLTYLDSSDARYSAALATSSGWSTTPSISLMLFSTMSLCSSA 313
>gb|CW213992.1|CW213992 104_645_11191856_148_37040_020 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11191856, DNA
sequence
Length = 466
Score = 64.8 bits (135), Expect(3) = 7e-029
Identities = 24/43 (55%), Positives = 32/43 (74%)
Frame = +3 / +1
Query: 699 HAYTASKHAIVGLTKNAACELRAHGVRVNCVSPFGVATPMLIN 827
+ Y+ SK AI G+ K AA EL HGVRVNC+SP+ V TPM+++
Sbjct: 328 YPYSVSKFAIAGIVKAAAAELSRHGVRVNCISPYAVPTPMVVD 456
Score = 63.4 bits (132), Expect(3) = 7e-029
Identities = 28/53 (52%), Positives = 34/53 (64%)
Frame = +3 / +1
Query: 471 GRLDVYCNNAGVLGRQTRAARSILSFDAAEFDRVLRVNALGAALGMKHAARAM 629
GRLDV N+AGV+G + I S D A+FD V+ VN G G+KHAARAM
Sbjct: 76 GRLDVMLNSAGVVGPLSPGTSQIASLDFAQFDAVMSVNVRGTLAGIKHAARAM 234
Score = 39.1 bits (79), Expect(3) = 7e-029
Identities = 15/24 (62%), Positives = 18/24 (75%)
Frame = +3 / +1
Query: 399 FVRCDVSVEDDVRRAVDWALSRHG 470
FV CDV+ ED V AVD A++RHG
Sbjct: 7 FVHCDVAAEDSVAAAVDAAVARHG 78
>gb|AW679848.1|AW679848 WS1_32_F10.g1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 582
Score = 78.5 bits (165), Expect(2) = 2e-027
Identities = 32/49 (65%), Positives = 37/49 (75%)
Frame = +3 / +3
Query: 696 PHAYTASKHAIVGLTKNAACELRAHGVRVNCVSPFGVATPMLINAWRQG 842
PHAYTASKHA+VGLTK+ A EL HGVRVNCVSP+ V T + + QG
Sbjct: 15 PHAYTASKHAVVGLTKSVAAELGRHGVRVNCVSPYAVPTALSMPHLPQG 161
Score = 74.4 bits (156), Expect(2) = 1e-022
Identities = 32/53 (60%), Positives = 35/53 (66%)
Frame = -2 / -3
Query: 841 PWRQALMSMGVATPKGETQLTRTPCARSSQAAFLVSPTMACLEAV*ACGPRPP 683
PW + M V T G+TQLTRTP SS A LVSPT ACL+AV ACGP PP
Sbjct: 160 PWGRCGMDSAVGTA*GDTQLTRTPWRPSSAATLLVSPTTACLDAVYACGPSPP 2
Score = 66.1 bits (138), Expect(2) = 2e-027
Identities = 28/44 (63%), Positives = 34/44 (77%)
Frame = +3 / +3
Query: 939 VRGLATLKGPTLRPRDIAEAVLFLASDEARYISGHNLVVDGGVT 1070
V G A LKG P+D+A+AVL+LASDEARY+S NL+VDGG T
Sbjct: 201 VGGEANLKGVDAMPKDVAQAVLYLASDEARYVSALNLMVDGGFT 332
Score = 54.2 bits (112), Expect(2) = 1e-022
Identities = 28/48 (58%), Positives = 32/48 (66%)
Frame = -2 / -3
Query: 1081 FLDVVTPPSTTRLWPDIYLASSLARKSTASAMSLGLSVGPLSVARPLT 938
+L V PPST RL YLASSLAR STA A SLG++ PL +A P T
Sbjct: 343 WLTAVKPPSTMRLSALTYLASSLARYSTAWATSLGMASTPLRLASPPT 200
>gb|CW241892.1|CW241892 104_701_11219026_116_37558_043 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11219026, DNA
sequence
Length = 409
Score = 124 bits (266), Expect = 2e-027
Identities = 58/102 (56%), Positives = 63/102 (61%)
Frame = -2 / -2
Query: 841 PWRQALMSMGVATPKGETQLTRTPCARSSQAAFLVSPTMACLEAV*ACGPRPPSTAATLA 662
PW + M V T G+TQLTRTP SS A LVSPT ACL+AV ACGP PP ATLA
Sbjct: 321 PWGRCGMDSAVGTA*GDTQLTRTPWRPSSAATLLVSPTTACLDAVYACGPSPPMALATLA 142
Query: 661 TETMLPARRGAMARAACFIPSAAPSALTRSTRSNSAASKDRM 536
++TM P G M RAACFIP P L STR SA S RM
Sbjct: 141 SDTMEPRFCGIMTRAACFIPRNTPCTLMSSTRRTSAKSTARM 16
Score = 113 bits (242), Expect = 5e-024
Identities = 51/102 (50%), Positives = 60/102 (58%)
Frame = +3 / +2
Query: 537 ILSFDAAEFDRVLRVNALGAALGMKHAARAMAPRRXXXXXXXXXXXXXXXXXXPHAYTAS 716
I + D AE RVL +N G LGMKHAAR M P++ PHAYTAS
Sbjct: 17 IRAVDFAEVRRVLDINVHGVFLGMKHAARVMIPQKRGSIVSLASVASAIGGLGPHAYTAS 196
Query: 717 KHAIVGLTKNAACELRAHGVRVNCVSPFGVATPMLINAWRQG 842
KHA+VGLTK+ A EL HGVRVNCVSP+ V T + + QG
Sbjct: 197 KHAVVGLTKSVAAELGRHGVRVNCVSPYAVPTALSMPHLPQG 322
>gb|BE592617.1|BE592617 WS1_95_H02.b1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 547
Score = 69.3 bits (145), Expect(4) = 6e-027
Identities = 30/50 (60%), Positives = 35/50 (70%)
Frame = +3 / +2
Query: 237 KRLDGKVAIVTGGARGIGEAIVRLFAKHGARXXXXXXXXXXGEALASALG 386
KRL+GKVA+VTGGA GIGEAIVRLF +HGA+ G+ L ALG
Sbjct: 131 KRLEGKVALVTGGATGIGEAIVRLFTEHGAKVCIADIQDEAGQQLRDALG 280
Score = 43.2 bits (88), Expect(4) = 6e-027
Identities = 19/35 (54%), Positives = 23/35 (65%)
Frame = +3 / +2
Query: 537 ILSFDAAEFDRVLRVNALGAALGMKHAARAMAPRR 641
I + D AE RVL +N G LGMKHAAR M P++
Sbjct: 428 IRAVDFAEVRRVLDINVHGVFLGMKHAARVMIPQK 532
Score = 37.7 bits (76), Expect(4) = 6e-027
Identities = 16/26 (61%), Positives = 18/26 (69%)
Frame = +3 / +2
Query: 393 VSFVRCDVSVEDDVRRAVDWALSRHG 470
V FV CDV+ E+DV RAVD A R G
Sbjct: 296 VMFVHCDVTSEEDVSRAVDAAAERFG 373
Score = 27.6 bits (54), Expect(4) = 6e-027
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = +3 / +2
Query: 453 ALSRHGGRLDVYCNNAGVLGRQTRAARSI 539
A + G LDV NNAGV G + R++
Sbjct: 353 AAAERFGALDVMVNNAGVTGAKVTDIRAV 439
>gb|CW111876.1|CW111876 104_485_11104574_116_34538_055 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11104574, DNA
sequence
Length = 401
Score = 104 bits (222), Expect = 3e-021
Identities = 51/92 (55%), Positives = 55/92 (59%)
Frame = -2 / -2
Query: 811 VATPKGETQLTRTPCARSSQAAFLVSPTMACLEAV*ACGPRPPSTAATLATETMLPARRG 632
V T G+TQ RTP SS A LVSPT AC + V*ACGP P ATLA++TM P G
Sbjct: 397 VGTE*GDTQ*ARTPRRPSSAATLLVSPTTACWDTV*ACGPSPQMALATLASDTMEPRFCG 218
Query: 631 AMARAACFIPSAAPSALTRSTRSNSAASKDRM 536
M RAACFIP P L STR SA S RM
Sbjct: 217 IMTRAACFIPRNTPCTLMSSTRRTSAKSTARM 122
Score = 99.1 bits (210), Expect(3) = 2e-025
Identities = 44/92 (47%), Positives = 52/92 (56%)
Frame = +3 / +3
Query: 537 ILSFDAAEFDRVLRVNALGAALGMKHAARAMAPRRXXXXXXXXXXXXXXXXXXPHAYTAS 716
I + D AE RVL +N G LGMKHAAR M P++ PHAYT S
Sbjct: 123 IRAVDFAEVRRVLDINVHGVFLGMKHAARVMIPQKRGSIVSLASVASAICGLGPHAYTVS 302
Query: 717 KHAIVGLTKNAACELRAHGVRVNCVSPFGVAT 812
+HA+VGLTK+ A EL GVR CVSP+ V T
Sbjct: 303 QHAVVGLTKSVAAELGRRGVRAYCVSPYSVPT 398
Score = 29.9 bits (59), Expect(3) = 2e-025
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = +3 / +3
Query: 408 CDVSVEDDVRRAVDWALSRHG 470
CD++ E+DV RAVD A R G
Sbjct: 6 CDLTSEEDVSRAVDPAAERFG 68
Score = 26.7 bits (52), Expect(3) = 2e-025
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = +3 / +3
Query: 471 GRLDVYCNNAGVLGRQTRAARSI 539
G LDV NNAGV G + R++
Sbjct: 66 GPLDVMVNNAGVTGAKVTDIRAV 134
>gb|CW271598.1|CW271598 104_743_11403084_116_35339_034 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11403084, DNA
sequence
Length = 492
Score = 73.0 bits (153), Expect(2) = 2e-025
Identities = 28/50 (56%), Positives = 38/50 (76%)
Frame = +3 / -3
Query: 936 VVRGLATLKGPTLRPRDIAEAVLFLASDEARYISGHNLVVDGGVTTSRNL 1085
++RGL LKG T DIA A ++LASD+A+Y+SGHNLVVDGG T+ + +
Sbjct: 250 IIRGLGELKGATCEAVDIARAAVYLASDDAKYVSGHNLVVDGGFTSYKRM 101
Score = 64.8 bits (135), Expect(2) = 2e-025
Identities = 24/43 (55%), Positives = 32/43 (74%)
Frame = +3 / -3
Query: 699 HAYTASKHAIVGLTKNAACELRAHGVRVNCVSPFGVATPMLIN 827
+ Y+ SK AI G+ K AA EL HGVRVNC+SP+ V TPM+++
Sbjct: 430 YPYSVSKFAIAGIVKAAAAELSRHGVRVNCISPYAVPTPMVVD 302
>gb|CW213991.1|CW213991 104_645_11191856_116_37041_020 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11191856, DNA
sequence
Length = 439
Score = 73.0 bits (153), Expect(2) = 2e-025
Identities = 28/50 (56%), Positives = 38/50 (76%)
Frame = +3 / -3
Query: 936 VVRGLATLKGPTLRPRDIAEAVLFLASDEARYISGHNLVVDGGVTTSRNL 1085
++RGL LKG T DIA A ++LASD+A+Y+SGHNLVVDGG T+ + +
Sbjct: 179 IIRGLGELKGATCEAVDIARAAVYLASDDAKYVSGHNLVVDGGFTSYKRM 30
Score = 64.8 bits (135), Expect(2) = 2e-025
Identities = 24/43 (55%), Positives = 32/43 (74%)
Frame = +3 / -3
Query: 699 HAYTASKHAIVGLTKNAACELRAHGVRVNCVSPFGVATPMLIN 827
+ Y+ SK AI G+ K AA EL HGVRVNC+SP+ V TPM+++
Sbjct: 359 YPYSVSKFAIAGIVKAAAAELSRHGVRVNCISPYAVPTPMVVD 231
>gb|CN147959.1|CN147959 WOUND1_53_G05.b1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_53_G05_A002 3', mRNA sequence
Length = 648
Score = 75.8 bits (159), Expect(2) = 6e-025
Identities = 33/85 (38%), Positives = 43/85 (50%)
Frame = +3 / +3
Query: 564 DRVLRVNALGAALGMKHAARAMAPRRXXXXXXXXXXXXXXXXXXPHAYTASKHAIVGLTK 743
DRV+ VNA G G+KHAAR M PRR P Y SK A+VG+ +
Sbjct: 3 DRVMAVNARGVLAGVKHAARVMVPRRTGSIICTASTTVVLGDMAPTPYWVSKVAVVGIVR 182
Query: 744 NAACELRAHGVRVNCVSPFGVATPM 818
A ++ GV VN +SP + TP+
Sbjct: 183 AVAGQMARSGVGVNAISPHAIPTPL 257
Score = 63.4 bits (132), Expect(2) = 6e-025
Identities = 25/48 (52%), Positives = 34/48 (70%)
Frame = +3 / +3
Query: 942 RGLATLKGPTLRPRDIAEAVLFLASDEARYISGHNLVVDGGVTTSRNL 1085
R + + GP L DIA A ++LAS+EA+Y++G NLVVDGG T S+ L
Sbjct: 324 RDMNEIAGPVLEAEDIARAAVYLASEEAKYVNGQNLVVDGGYTVSKAL 467
>gb|CW271599.1|CW271599 104_743_11403084_148_35343_034 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11403084, DNA
sequence
Length = 594
Score = 63.4 bits (132), Expect(3) = 8e-025
Identities = 28/53 (52%), Positives = 34/53 (64%)
Frame = +3 / +1
Query: 471 GRLDVYCNNAGVLGRQTRAARSILSFDAAEFDRVLRVNALGAALGMKHAARAM 629
GRLDV N+AGV+G + I S D A+FD V+ VN G G+KHAARAM
Sbjct: 433 GRLDVMLNSAGVVGPLSPGTSQIASLDFAQFDAVMSVNVRGTLAGIKHAARAM 591
Score = 47.8 bits (98), Expect(3) = 8e-025
Identities = 20/37 (54%), Positives = 23/37 (62%)
Frame = +3 / +1
Query: 360 GEALASALGPQVSFVRCDVSVEDDVRRAVDWALSRHG 470
G A LGP FV CDV+ ED V AVD A++RHG
Sbjct: 325 GLQTAHELGPNAHFVHCDVAAEDSVAAAVDAAVARHG 435
Score = 42.3 bits (86), Expect(3) = 8e-025
Identities = 15/30 (50%), Positives = 23/30 (76%)
Frame = +3 / +1
Query: 240 RLDGKVAIVTGGARGIGEAIVRLFAKHGAR 329
RL+GK+A++TGGA G+G+A F + GA+
Sbjct: 202 RLEGKIALITGGASGLGKAAAHEFIQEGAQ 291
>gb|CW051311.1|CW051311 104_291_10515176_114_30192 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10515176, DNA
sequence
Length = 308
Score = 116 bits (247), Expect = 9e-025
Identities = 53/88 (60%), Positives = 58/88 (65%)
Frame = -2 / -3
Query: 799 KGETQLTRTPCARSSQAAFLVSPTMACLEAV*ACGPRPPSTAATLATETMLPARRGAMAR 620
+G+TQLTRTP SS A LVSPT ACL+AV ACGP PP ATLA++TM P G M R
Sbjct: 306 RGDTQLTRTPWRPSSAATLLVSPTTACLDAVYACGPSPPMALATLASDTMEPRFCGIMTR 127
Query: 619 AACFIPSAAPSALTRSTRSNSAASKDRM 536
AACFIP P L STR SA S RM
Sbjct: 126 AACFIPRNTPCTLMSSTRRTSAKSTARM 43
Score = 107 bits (228), Expect = 4e-022
Identities = 47/87 (54%), Positives = 53/87 (60%)
Frame = +3 / +2
Query: 537 ILSFDAAEFDRVLRVNALGAALGMKHAARAMAPRRXXXXXXXXXXXXXXXXXXPHAYTAS 716
I + D AE RVL +N G LGMKHAAR M P++ PHAYTAS
Sbjct: 44 IRAVDFAEVRRVLDINVHGVFLGMKHAARVMIPQKRGSIVSLASVASAIGGLGPHAYTAS 223
Query: 717 KHAIVGLTKNAACELRAHGVRVNCVSP 797
KHA+VGLTK+ A EL HGVRVNCVSP
Sbjct: 224 KHAVVGLTKSVAAELGRHGVRVNCVSP 304
>gb|CW182784.1|CW182784 104_598_11164264_116_36670_058 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11164264, DNA
sequence
Length = 602
Score = 67.5 bits (141), Expect(4) = 2e-024
Identities = 26/40 (65%), Positives = 32/40 (80%)
Frame = +3 / -2
Query: 699 HAYTASKHAIVGLTKNAACELRAHGVRVNCVSPFGVATPM 818
+AY +K A+V LT+NAA EL HG+RVNCVSP GVATP+
Sbjct: 223 YAYACAKRALVALTENAAAELGRHGIRVNCVSPAGVATPL 104
Score = 45.5 bits (93), Expect(4) = 2e-024
Identities = 20/39 (51%), Positives = 24/39 (61%)
Frame = +3 / -2
Query: 525 AARSILSFDAAEFDRVLRVNALGAALGMKHAARAMAPRR 641
A S+ A+F+RVL VN +G LG KHAAR M P R
Sbjct: 400 ACYSVRDSGKADFERVLAVNLVGPFLGTKHAARVMVPAR 284
Score = 32.7 bits (65), Expect(4) = 2e-024
Identities = 13/25 (52%), Positives = 17/25 (68%)
Frame = +3 / -2
Query: 396 SFVRCDVSVEDDVRRAVDWALSRHG 470
S+ CDV+ EDDV AVD A++ G
Sbjct: 517 SYFHCDVTSEDDVAAAVDHAVATFG 443
Score = 23.5 bits (45), Expect(4) = 2e-024
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = +3 / -2
Query: 471 GRLDVYCNNAGVLG 512
G LD+ NNAGV G
Sbjct: 445 GALDIMFNNAGVSG 404
>gb|CW325783.1|CW325783 104_820_11477874_148_35927_065 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11477874, DNA
sequence
Length = 630
Score = 84.9 bits (179), Expect(2) = 5e-024
Identities = 37/86 (43%), Positives = 52/86 (60%)
Frame = +3 / +3
Query: 237 KRLDGKVAIVTGGARGIGEAIVRLFAKHGARXXXXXXXXXXGEALASALGPQVSFVRCDV 416
+RL GKVA++TG A GIG+A F ++GA+ G A+A+ LGP S+ RCDV
Sbjct: 111 QRLAGKVAVITGAASGIGKATAAEFVRNGAKVILADVQDDAGRAVAAELGPAASYTRCDV 290
Query: 417 SVEDDVRRAVDWALSRHGGRLDVYCN 494
+ E + AVD A++RHG +Y N
Sbjct: 291 TDEAQIAAAVDLAVARHGRLDVLYSN 368
Score = 48.3 bits (99), Expect(2) = 5e-024
Identities = 20/38 (52%), Positives = 24/38 (63%)
Frame = +3 / +3
Query: 525 AARSILSFDAAEFDRVLRVNALGAALGMKHAARAMAPR 638
A + S D A+FDRV+ VNA A +KHAAR M PR
Sbjct: 390 APAPLASLDLADFDRVMAVNARSAVAALKHAARVMVPR 503
>gb|BG412301.1|BG412301 OV2_40_C07.b1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA
sequence
Length = 485
Score = 66.1 bits (138), Expect(4) = 5e-024
Identities = 27/61 (44%), Positives = 37/61 (60%)
Frame = +3 / +1
Query: 204 NGATAVPTPMPKRLDGKVAIVTGGARGIGEAIVRLFAKHGARXXXXXXXXXXGEALASAL 383
+ A+PT P++L GKVA++TGGA GIGE VRLF +HGAR G + + +
Sbjct: 13 SSTVALPTTPPRKLQGKVAMITGGASGIGERTVRLFVEHGARVVVADIQDEAGARVCADV 192
Query: 384 G 386
G
Sbjct: 193 G 195
Score = 45.5 bits (93), Expect(4) = 5e-024
Identities = 20/39 (51%), Positives = 24/39 (61%)
Frame = +3 / +1
Query: 525 AARSILSFDAAEFDRVLRVNALGAALGMKHAARAMAPRR 641
A S+ A+F+RVL VN +G LG KHAAR M P R
Sbjct: 325 ACYSVRDSGKADFERVLAVNLVGPFLGTKHAARVMVPAR 441
Score = 32.7 bits (65), Expect(4) = 5e-024
Identities = 13/25 (52%), Positives = 17/25 (68%)
Frame = +3 / +1
Query: 396 SFVRCDVSVEDDVRRAVDWALSRHG 470
S+ CDV+ EDDV AVD A++ G
Sbjct: 208 SYFHCDVTSEDDVAAAVDHAVATFG 282
Score = 23.5 bits (45), Expect(4) = 5e-024
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = +3 / +1
Query: 471 GRLDVYCNNAGVLG 512
G LD+ NNAGV G
Sbjct: 280 GALDIMFNNAGVSG 321
>gb|CW457734.1|CW457734 fsbb001f203k22k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f203k22, DNA
sequence
Length = 502
Score = 66.1 bits (138), Expect(2) = 2e-023
Identities = 28/44 (63%), Positives = 34/44 (77%)
Frame = +3 / -3
Query: 939 VRGLATLKGPTLRPRDIAEAVLFLASDEARYISGHNLVVDGGVT 1070
V G A LKG P+D+A+AVL+LASDEARY+S NL+VDGG T
Sbjct: 323 VGGEANLKGVDAMPKDVAQAVLYLASDEARYVSALNLMVDGGFT 192
Score = 65.2 bits (136), Expect(2) = 2e-023
Identities = 26/38 (68%), Positives = 30/38 (78%)
Frame = +3 / -3
Query: 705 YTASKHAIVGLTKNAACELRAHGVRVNCVSPFGVATPM 818
YTASKHA+VGLTK+ A EL H VRVNCVSP+ V T +
Sbjct: 500 YTASKHAVVGLTKSVAAELGRHRVRVNCVSPYAVPTAL 387
>gb|CW199664.1|CW199664 104_624_11183633_116_37058_065 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11183633, DNA
sequence
Length = 504
Score = 71.2 bits (149), Expect(4) = 2e-023
Identities = 29/41 (70%), Positives = 34/41 (82%)
Frame = +3 / +1
Query: 696 PHAYTASKHAIVGLTKNAACELRAHGVRVNCVSPFGVATPM 818
P +YTASKHA++GL + AA EL HGVRVNCVSP GVATP+
Sbjct: 343 PASYTASKHALLGLVRAAAGELGRHGVRVNCVSPGGVATPL 465
Score = 44.6 bits (91), Expect(4) = 2e-023
Identities = 19/32 (59%), Positives = 23/32 (71%)
Frame = +3 / +1
Query: 534 SILSFDAAEFDRVLRVNALGAALGMKHAARAM 629
S++ D AE DRV+ VN GAA +KHAARAM
Sbjct: 169 SVMDMDLAELDRVMAVNFRGAAACVKHAARAM 264
Score = 24.9 bits (48), Expect(4) = 2e-023
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = +3 / +1
Query: 471 GRLDVYCNNAGVL 509
GRLDV +NAGVL
Sbjct: 118 GRLDVMMSNAGVL 156
Score = 24.9 bits (48), Expect(4) = 2e-023
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = +3 / +1
Query: 372 ASALGPQVSFVRCDVSVEDDVRRAVDWALSRHG 470
AS + ++ RCDV+ E V V ++ HG
Sbjct: 22 ASVGSGRCAYARCDVTDEAQVEATVARVVAAHG 120
>gb|CL180837.1|CL180837 104_391_10896308_116_31928_068 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10896308, DNA
sequence
Length = 731
Score = 55.1 bits (114), Expect(4) = 6e-023
Identities = 23/39 (58%), Positives = 28/39 (71%)
Frame = +3 / +2
Query: 525 AARSILSFDAAEFDRVLRVNALGAALGMKHAARAMAPRR 641
AA S+ + D A+FDRV+ VNA G G+KHAAR M PRR
Sbjct: 566 AASSLGAIDLADFDRVMAVNARGVLAGVKHAARVMVPRR 682
Score = 52.4 bits (108), Expect(4) = 6e-023
Identities = 23/49 (46%), Positives = 30/49 (61%)
Frame = +3 / +2
Query: 240 RLDGKVAIVTGGARGIGEAIVRLFAKHGARXXXXXXXXXXGEALASALG 386
RL GKVA++TGGA GIG+A F ++GAR G A+A+ LG
Sbjct: 287 RLAGKVAVITGGASGIGKATAAEFVRNGARVIIADVQDDLGHAVATELG 433
Score = 31.3 bits (62), Expect(4) = 6e-023
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = +3 / +2
Query: 393 VSFVRCDVSVEDDVRRAVDWALSRHG 470
V + RCDV+ E V AVD A+ HG
Sbjct: 443 VRYTRCDVTDEAQVAAAVDLAVQLHG 520
Score = 25.4 bits (49), Expect(4) = 6e-023
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = +3 / +2
Query: 471 GRLDVYCNNAGVLG 512
GRLDV NNAG+ G
Sbjct: 518 GRLDVMYNNAGIGG 559
>gb|BZ342489.1|BZ342489 ic83h06.g1 WGS-SbicolorF (JM107 adapted methyl filtered) Sorghum
bicolor genomic clone ic83h06 5', DNA sequence
Length = 410
Score = 109 bits (232), Expect(2) = 1e-022
Identities = 44/53 (83%), Positives = 47/53 (88%)
Frame = -1 / -2
Query: 242 PLGHRCGHGCGAIAVPAVVRGRHDGLVRVRYLGAEVQRRHSCRGVGGEASVHV 84
PLGHR GH CGA+AVPAVVR RHDGLV VR+LGAEV+RRHSCR VGGEA VHV
Sbjct: 349 PLGHRSGHDCGAMAVPAVVRRRHDGLVGVRHLGAEVERRHSCRCVGGEARVHV 191
Score = 89.5 bits (189), Expect(3) = 6e-023
Identities = 32/36 (88%), Positives = 34/36 (94%)
Frame = +3 / +2
Query: 135 DLRPEIAHAHQPVMSPSHHGWDGNGATAVPTPMPKR 242
DLRPE+AHAHQPVMSPSHHGWDG+GA VPTPMPKR
Sbjct: 242 DLRPEMAHAHQPVMSPSHHGWDGHGAAVVPTPMPKR 349
Score = 34.5 bits (69), Expect(3) = 6e-023
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = +1 / +3
Query: 67 SNNNIHTCTLASPPTPRQLC 126
++ + TCT ASPPT RQLC
Sbjct: 174 THTRLXTCTRASPPTQRQLC 233
Score = 23.1 bits (44), Expect(3) = 6e-023
Identities = 8/21 (38%), Positives = 11/21 (52%)
Frame = +1 / +3
Query: 1 HALASCVFLCELWCGGRDTHS 63
H+ + L ELWCG H+
Sbjct: 114 HSRTRLLCLRELWCGRDSRHT 176
Score = 21.7 bits (41), Expect(2) = 1e-022
Identities = 6/12 (50%), Positives = 9/12 (75%)
Frame = -1 / -2
Query: 59 CVSRPPHHSSQR 24
C+ PHH+S+R
Sbjct: 172 CLESRPHHNSRR 137
>gb|CW313125.1|CW313125 104_803_11471123_148_35790_044 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11471123, DNA
sequence
Length = 682
Score = 70.3 bits (147), Expect(2) = 4e-022
Identities = 28/59 (47%), Positives = 39/59 (66%)
Frame = +3 / +1
Query: 903 PSDQEVEKMEEVVRGLATLKGPTLRPRDIAEAVLFLASDEARYISGHNLVVDGGVTTSR 1079
P E V +G + GP L +D+A+A L+LASDEA+Y++GHNL+VDGG T S+
Sbjct: 199 PEGTVEEHRRIVEKGYNEMVGPVLEEKDVAKAALYLASDEAKYVNGHNLLVDGGYTVSK 375
Score = 56.5 bits (117), Expect(2) = 4e-022
Identities = 24/48 (50%), Positives = 31/48 (64%)
Frame = +3 / +1
Query: 696 PHAYTASKHAIVGLTKNAACELRAHGVRVNCVSPFGVATPMLINAWRQ 839
P AYTASK A+VGL + A E+ GVRVN +SP + TP+ + A Q
Sbjct: 49 PPAYTASKAAVVGLVRAVAAEVARSGVRVNAISPHAIPTPLTMAAVAQ 192
>gb|BG241362.1|BG241362 RHIZ2_51_B01.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 452
Score = 70.7 bits (148), Expect(2) = 4e-022
Identities = 28/59 (47%), Positives = 39/59 (66%)
Frame = +3 / +2
Query: 903 PSDQEVEKMEEVVRGLATLKGPTLRPRDIAEAVLFLASDEARYISGHNLVVDGGVTTSR 1079
P E V +G + GP L +D+A+A L+LASDEA+Y++GHNL+VDGG T S+
Sbjct: 164 PEGSVEEHRRIVEKGYNEMVGPVLEEKDVAKAALYLASDEAKYVNGHNLLVDGGYTVSK 340
Score = 56.1 bits (116), Expect(2) = 4e-022
Identities = 23/45 (51%), Positives = 30/45 (66%)
Frame = +3 / +2
Query: 696 PHAYTASKHAIVGLTKNAACELRAHGVRVNCVSPFGVATPMLINA 830
P AYTASK A+VGL + A E+ GVRVN +SP + TP+ + A
Sbjct: 14 PPAYTASKAAVVGLVRAVAAEVARSGVRVNAISPHAIPTPLTMAA 148
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 1,078,862,397
Number of Sequences: 832831
Number of extensions: 16176996
Number of successful extensions: 245510
Number of sequences better than 1.0e-020: 59
length of database: 163,786,556
effective HSP length: 55
effective length of database: 117,980,851
effective search space used: 41411278701
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)