TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= CCR2
(1466 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AW922257.1|AW922257 DG1_17_G01.b1_A002 Dark Grown 1 (DG1... 358 9e-098
gb|CF429087.1|CF429087 PH1_19_G12.g1_A002 Phosphorous-defic... 341 2e-092
gb|BE125424.1|BE125424 DG1_25_G01.b1_A002 Dark Grown 1 (DG1... 322 7e-087
gb|CF432928.1|CF432928 NIT1_19_B11.g1_A002 Nitrogen-deficie... 318 1e-085
gb|CW148381.1|CW148381 104_547_11141925_148_35008_095 Sorgh... 93 2e-061
gb|CF428989.1|CF428989 PH1_19_G12.b1_A002 Phosphorous-defic... 111 4e-060
gb|CW181342.1|CW181342 104_596_11163456_116_36654_092 Sorgh... 202 1e-057
gb|CW185694.1|CW185694 104_603_11166185_148_36702_073 Sorgh... 202 1e-057
gb|CD210709.1|CD210709 HS1_49_C07.b1_A012 Heat-shocked seed... 125 2e-057
gb|CW287590.1|CW287590 104_765_11411495_116_35521_084 Sorgh... 105 3e-056
gb|CW287591.1|CW287591 104_765_11411495_148_35525_084 Sorgh... 143 2e-053
gb|CW148380.1|CW148380 104_547_11141925_116_35012_095 Sorgh... 89 9e-053
gb|CW346174.1|CW346174 104_849_11488883_148_36218_040 Sorgh... 102 1e-050
gb|CN129192.1|CN129192 RHOH1_34_B10.b3_A002 Acid- and alkal... 179 8e-048
gb|BE362142.1|BE362142 DG1_84_C11.g1_A002 Dark Grown 1 (DG1... 179 8e-048
gb|BE362152.1|BE362152 DG1_84_D11.g1_A002 Dark Grown 1 (DG1... 179 8e-048
gb|BE360923.1|BE360923 DG1_67_G03.g1_A002 Dark Grown 1 (DG1... 179 8e-048
gb|CN138460.1|CN138460 OX1_64_A03.b1_A002 Oxidatively-stres... 177 2e-047
gb|CX607016.1|CX607016 ANR1_6_E09.b1_A002 Anaerobic roots S... 176 5e-047
gb|CW436323.1|CW436323 fsbb001f152o03f0 Sorghum methylation... 95 5e-045
gb|CX607102.1|CX607102 ANR1_6_E09.g1_A002 Anaerobic roots S... 164 3e-044
gb|CN125662.1|CN125662 RHOH1_12_B03.g1_A002 Acid- and alkal... 100 2e-043
gb|CW480229.1|CW480229 fsbb001f239d02f0 Sorghum methylation... 102 2e-043
gb|CN132335.1|CN132335 OX1_5_C03.g1_A002 Oxidatively-stress... 110 9e-043
gb|CD431095.1|CD431095 ETH1_6_A10.g1_A002 Ethylene-treated ... 164 1e-042
gb|CN129279.1|CN129279 RHOH1_34_B10.g1_A002 Acid- and alkal... 175 1e-042
gb|CN137521.1|CN137521 OX1_57_G07.g1_A002 Oxidatively-stres... 175 1e-042
gb|CN138545.1|CN138545 OX1_64_A03.g1_A002 Oxidatively-stres... 175 1e-042
gb|CW317382.1|CW317382 104_809_11473385_148_35865_077 Sorgh... 96 9e-042
gb|CN137640.1|CN137640 OX1_58_D03.g1_A002 Oxidatively-stres... 168 2e-040
gb|CX610621.1|CX610621 ANR1_19_G06.g1_A002 Anaerobic roots ... 165 1e-039
gb|CD231600.1|CD231600 SS1_22_F09.g1_A012 Salt-stressed see... 163 5e-039
gb|BE360762.1|BE360762 DG1_66_C04.g2_A002 Dark Grown 1 (DG1... 146 4e-038
gb|BE360688.1|BE360688 DG1_66_C04.b2_A002 Dark Grown 1 (DG1... 124 3e-037
gb|BG051912.1|BG051912 RHIZ2_6_E04.g1_A003 Rhizome2 (RHIZ2)... 143 4e-037
gb|CL178474.1|CL178474 104_386_10894614_116_31912_294 Sorgh... 84 9e-037
gb|CN152656.1|CN152656 WOUND1_83_A06.g1_A002 Wounded leaves... 74 3e-036
gb|CB925802.1|CB925802 ABA1_23_F05.g1_A012 Abscisic acid-tr... 98 3e-036
gb|CF428334.1|CF428334 PH1_14_C04.g1_A002 Phosphorous-defic... 98 2e-035
gb|BZ347040.1|BZ347040 hw04e11.b1 WGS-SbicolorF (JM107 adap... 87 5e-035
gb|CW346173.1|CW346173 104_849_11488883_116_36217_040 Sorgh... 102 7e-035
gb|CW196299.1|CW196299 104_620_11181097_148_36814_011 Sorgh... 102 7e-035
gb|CW480230.1|CW480230 fsbb001f239d02k0 Sorghum methylation... 102 7e-035
gb|CN145669.1|CN145669 WOUND1_34_B03.g1_A002 Wounded leaves... 90 3e-034
gb|AW678856.1|AW678856 WS1_1_A12.g1_A002 Water-stressed 1 (... 131 2e-033
gb|CX608316.1|CX608316 ANR1_37_H09.g1_A002 Anaerobic roots ... 144 2e-033
gb|CW051453.1|CW051453 104_291_10515256_114_30192 Sorghum m... 77 8e-033
gb|CW153631.1|CW153631 104_555_11145149_148_36344_025 Sorgh... 143 8e-033
gb|CX608225.1|CX608225 ANR1_37_H09.b1_A002 Anaerobic roots ... 127 2e-032
gb|CW247120.1|CW247120 104_708_11221624_148_36079_064 Sorgh... 69 4e-032
gb|CF070740.1|CF070740 FE1_4_B05.b1_A002 Iron-deficient see... 99 3e-031
gb|CW317851.1|CW317851 104_809_11473636_148_35864_002 Sorgh... 98 1e-030
gb|CW090504.1|CW090504 104_436_10949318_116_32611_057 Sorgh... 66 2e-029
gb|CB925645.1|CB925645 ABA1_22_G02.g1_A012 Abscisic acid-tr... 73 3e-029
gb|CN137446.1|CN137446 OX1_57_G07.b1_A002 Oxidatively-stres... 116 4e-029
gb|BM318321.1|BM318321 PI1_77_C02.g9_A002 Pathogen induced ... 116 4e-029
gb|BG048617.1|BG048617 OV1_14_H08.b1_A002 Ovary 1 (OV1) Sor... 74 6e-029
gb|CD225805.1|CD225805 CCC1_41_H04.g1_A007 Callus culture/c... 74 2e-028
gb|CW456492.1|CW456492 fsbb001f201n16k0 Sorghum methylation... 93 4e-028
gb|CD228671.1|CD228671 CCC1_9_E11.b1_A007 Callus culture/ce... 112 5e-028
gb|CN124236.1|CN124236 RHOH1_3_B09.g1_A002 Acid- and alkali... 50 7e-028
gb|BZ367897.1|BZ367897 id07b12.g1 WGS-SbicolorF (JM107 adap... 69 4e-027
gb|CW436324.1|CW436324 fsbb001f152o03k0 Sorghum methylation... 123 5e-027
gb|BE359158.1|BE359158 DG1_39_C02.b1_A002 Dark Grown 1 (DG1... 101 6e-027
gb|CF485730.1|CF485730 POL1_33_F08.b1_A002 Pollen Sorghum b... 122 1e-026
gb|CD206423.1|CD206423 HS1_22_G03.g1_A012 Heat-shocked seed... 101 2e-026
gb|CD210805.1|CD210805 HS1_49_C07.g1_A012 Heat-shocked seed... 122 2e-026
gb|CF480908.1|CF480908 POL1_68_F11.g1_A002 Pollen Sorghum b... 70 3e-026
gb|CD430520.1|CD430520 ETH1_19_A12.b1_A002 Ethylene-treated... 121 4e-026
gb|CW408711.1|CW408711 fsbb001f102l13k0 Sorghum methylation... 65 6e-026
emb|AX512962.1| Sequence 7 from Patent WO02063021 62 2e-025
gb|CD430564.1|CD430564 ETH1_19_A12.g1_A002 Ethylene-treated... 118 2e-025
gb|CL158052.1|CL158052 104_346_10803269_114_31375_245 Sorgh... 94 2e-024
gb|BE363053.1|BE363053 DG1_9_D02.b1_A002 Dark Grown 1 (DG1)... 101 2e-024
gb|CB927150.1|CB927150 ABA1_13_F08.g1_A012 Abscisic acid-tr... 114 3e-024
gb|CW254775.1|CW254775 104_719_11225861_116_35122_029 Sorgh... 84 3e-024
gb|CN124163.1|CN124163 RHOH1_3_B09.b1_A002 Acid- and alkali... 72 4e-024
gb|CN147237.1|CN147237 WOUND1_48_B05.g1_A002 Wounded leaves... 57 5e-024
gb|CW491513.1|CW491513 fsbb001f281g15f0 Sorghum methylation... 71 6e-024
gb|CW254776.1|CW254776 104_719_11225861_148_35126_029 Sorgh... 64 8e-024
gb|CN125588.1|CN125588 RHOH1_12_B03.b1_A002 Acid- and alkal... 83 9e-024
gb|CW307093.1|CW307093 104_795_11467960_148_35737_064 Sorgh... 68 1e-023
gb|BE357273.1|BE357273 DG1_148_D02.b1_A002 Dark Grown 1 (DG... 111 3e-023
gb|CX614598.1|CX614598 GABR1_15_C04.b1_A002 GA- or brassino... 80 6e-023
gb|CW316181.1|CW316181 104_807_11472758_116_35843_055 Sorgh... 51 6e-023
gb|CW338277.1|CW338277 104_838_11484658_116_36129_039 Sorgh... 51 7e-023
gb|BM323476.1|BM323476 PIC1_19_G04.b1_A002 Pathogen-infecte... 74 2e-022
gb|CF485803.1|CF485803 POL1_33_F08.g1_A002 Pollen Sorghum b... 67 2e-022
gb|CD213428.1|CD213428 HS1_40_A07.g1_A012 Heat-shocked seed... 101 2e-022
gb|BM324287.1|BM324287 PIC1_26_E07.b1_A002 Pathogen-infecte... 98 5e-022
gb|BI211450.1|BI211450 IP1_60_H10.b1_A002 Immature pannicle... 66 3e-021
gb|BI351580.1|BI351580 IP1_72_F10.b1_A002 Immature pannicle... 66 3e-021
gb|CN137561.1|CN137561 OX1_58_D03.b1_A002 Oxidatively-stres... 90 3e-021
gb|AW678763.1|AW678763 WS1_1_A12.b2_A002 Water-stressed 1 (... 104 3e-021
gb|BE362094.1|BE362094 DG1_84_C11.b1_A002 Dark Grown 1 (DG1... 104 3e-021
gb|BE362098.1|BE362098 DG1_84_D11.b1_A002 Dark Grown 1 (DG1... 104 3e-021
gb|BE599908.1|BE599908 PI1_77_C02.b1_A002 Pathogen induced ... 104 3e-021
gb|CD228754.1|CD228754 CCC1_9_E11.g1_A007 Callus culture/ce... 104 3e-021
gb|CN146030.1|CN146030 WOUND1_37_A04.b1_A002 Wounded leaves... 74 4e-021
gb|CW317850.1|CW317850 104_809_11473636_116_35860_002 Sorgh... 81 1e-020
gb|CW180919.1|CW180919 104_595_11163212_148_36646_070 Sorgh... 69 1e-020
gb|CB926819.1|CB926819 ABA1_10_G05.g1_A012 Abscisic acid-tr... 57 2e-020
gb|CX612381.1|CX612381 GABR1_2_D06.b1_A002 GA- or brassinol... 79 3e-020
gb|CB925013.1|CB925013 ABA1_29_B06.g1_A012 Abscisic acid-tr... 101 3e-020
gb|CF428507.1|CF428507 PH1_15_D07.g1_A002 Phosphorous-defic... 100 4e-020
gb|CX608598.1|CX608598 ANR1_39_C06.g1_A002 Anaerobic roots ... 100 4e-020
gb|BZ351615.1|BZ351615 hw04e11.g1 WGS-SbicolorF (JM107 adap... 53 7e-020
gb|CX608520.1|CX608520 ANR1_39_C06.b1_A002 Anaerobic roots ... 85 1e-019
gb|CF482349.1|CF482349 POL1_6_A05.g1_A002 Pollen Sorghum bi... 61 1e-019
gb|CW400223.1|CW400223 fsbb001f090g22f0 Sorghum methylation... 95 1e-019
gb|CL158053.1|CL158053 104_346_10803269_116_31376_245 Sorgh... 81 2e-019
gb|CW269378.1|CW269378 104_740_11401813_116_36229_055 Sorgh... 57 2e-019
gb|BM324463.1|BM324463 PIC1_31_E07.b1_A002 Pathogen-infecte... 47 3e-019
gb|CW377684.1|CW377684 fsbb001f056b22f0 Sorghum methylation... 98 3e-019
gb|CN135147.1|CN135147 OX1_30_G11.g1_A002 Oxidatively-stres... 82 3e-019
gb|CW304703.1|CW304703 104_789_11465922_116_35702_067 Sorgh... 61 5e-019
gb|CW183575.1|CW183575 104_599_11164688_148_36677_024 Sorgh... 57 6e-019
gb|CN125480.1|CN125480 RHOH1_11_G11.b1_A002 Acid- and alkal... 82 6e-019
gb|CB927052.1|CB927052 ABA1_13_F08.b1_A012 Abscisic acid-tr... 82 6e-019
gb|CW152652.1|CW152652 104_554_11144606_148_37482_063 Sorgh... 60 8e-019
gb|CW332608.1|CW332608 104_830_11481507_116_36036_010 Sorgh... 68 1e-018
gb|BM328785.1|BM328785 PIC1_26_E07.g1_A002 Pathogen-infecte... 60 2e-018
gb|CL161050.1|CL161050 104_352_10805442_116_31827_114 Sorgh... 66 2e-018
gb|CW494628.1|CW494628 fsbb001f286a06f0 Sorghum methylation... 66 2e-018
gb|CD206390.1|CD206390 HS1_22_H01.g1_A012 Heat-shocked seed... 94 7e-018
gb|AF010283.1| Sorghum bicolor ADP-glucose pyrophosphorylas... 57 1e-017
gb|BI141055.1|BI141055 IP1_42_E11.b1_A002 Immature pannicle... 66 1e-017
gb|BG557816.1|BG557816 EM1_53_F09.b1_A002 Embryo 1 (EM1) So... 54 3e-017
gb|CN132257.1|CN132257 OX1_5_C03.b1_A002 Oxidatively-stress... 57 4e-017
gb|CN128033.1|CN128033 RHOH1_26_C10.g1_A002 Acid- and alkal... 50 4e-017
gb|CD430959.1|CD430959 ETH1_6_A10.b1_A002 Ethylene-treated ... 79 7e-017
gb|BE360812.1|BE360812 DG1_67_G03.b2_A002 Dark Grown 1 (DG1... 90 8e-017
gb|CW031414.1|CW031414 104_260_10500796_114_30365 Sorghum m... 45 2e-016
gb|CX614668.1|CX614668 GABR1_15_C04.g1_A002 GA- or brassino... 58 2e-016
gb|BZ342273.1|BZ342273 ic81e11.b1 WGS-SbicolorF (JM107 adap... 49 3e-016
gb|CW408710.1|CW408710 fsbb001f102l13f0 Sorghum methylation... 49 3e-016
gb|CF756307.1|CF756307 DSAF1_4_G03.g1_A011 Drought-stressed... 76 3e-016
gb|BG946962.1|BG946962 IP1_1_H02.b1_A002 Immature pannicle ... 67 3e-016
gb|CW192938.1|CW192938 104_615_11179297_116_36769_005 Sorgh... 70 4e-016
gb|CW403430.1|CW403430 fsbb001f095c10k0 Sorghum methylation... 70 4e-016
gb|CW203138.1|CW203138 104_629_11185470_116_36913_021 Sorgh... 57 4e-016
gb|CW305139.1|CW305139 104_790_11466160_116_37435_058 Sorgh... 57 5e-016
gb|CF758652.1|CF758652 DSAF1_35_A01.g1_A011 Drought-stresse... 69 8e-016
gb|CD228254.1|CD228254 CCC1_6_B12.g1_A007 Callus culture/ce... 57 9e-016
gb|CF756225.1|CF756225 DSAF1_4_G03.b1_A011 Drought-stressed... 63 9e-016
gb|CW185360.1|CW185360 104_603_11166021_116_36833_095 Sorgh... 86 1e-015
gb|AW923197.1|AW923197 DG1_50_E07.b1_A002 Dark Grown 1 (DG1... 85 2e-015
gb|CW357175.1|CW357175 fsbb001f023k20f0 Sorghum methylation... 49 2e-015
gb|CL183456.1|CL183456 104_396_10898188_114_31923_028 Sorgh... 55 2e-015
gb|AW671852.1|AW671852 LG1_352_C05.b1_A002 Light Grown 1 (L... 61 4e-015
gb|CW217859.1|CW217859 104_651_11195875_148_37457_076 Sorgh... 61 4e-015
gb|CW098263.1|CW098263 104_464_11002911_148_34364_052 Sorgh... 61 1e-014
gb|CD225698.1|CD225698 CCC1_41_H04.b1_A007 Callus culture/c... 74 2e-014
gb|CW065681.1|CW065681 104_312_10523281_114_30128 Sorghum m... 52 2e-014
gb|CW299315.1|CW299315 104_782_11463048_116_36235_092 Sorgh... 52 2e-014
gb|CW470814.1|CW470814 fsbb001f224d21k0 Sorghum methylation... 69 2e-014
gb|CL161049.1|CL161049 104_352_10805442_114_31826_114 Sorgh... 52 2e-014
gb|CW442451.1|CW442451 fsbb001f162c02k0 Sorghum methylation... 69 2e-014
gb|CW307337.1|CW307337 104_795_11468086_148_36060_089 Sorgh... 58 3e-014
gb|CW344753.1|CW344753 104_847_11488123_116_36201_072 Sorgh... 58 3e-014
gb|BZ331519.1|BZ331519 hw10a10.b1 WGS-SbicolorF (JM107 adap... 66 3e-014
gb|BI141675.1|BI141675 IP1_55_E06.b1_A002 Immature pannicle... 67 4e-014
gb|AW678617.1|AW678617 WS1_1_A12.b1_A002 Water-stressed 1 (... 81 5e-014
gb|CD227332.1|CD227332 CCC1_50_B06.g1_A007 Callus culture/c... 65 6e-014
gb|CL173566.1|CL173566 104_377_10890963_116_31793_099 Sorgh... 52 6e-014
gb|CW119145.1|CW119145 104_496_11108601_116_34636_047 Sorgh... 80 7e-014
gb|CW134363.1|CW134363 104_518_11117266_148_34819_039 Sorgh... 80 7e-014
gb|CW183096.1|CW183096 104_598_11164429_148_36664_049 Sorgh... 80 7e-014
gb|CW427351.1|CW427351 fsbb001f139e20f0 Sorghum methylation... 80 7e-014
gb|CW087332.1|CW087332 104_431_10947561_116_32569_033 Sorgh... 59 8e-014
gb|BG240109.1|BG240109 OV1_18_A05.b1_A002 Ovary 1 (OV1) Sor... 58 9e-014
gb|CW338278.1|CW338278 104_838_11484658_148_36128_039 Sorgh... 51 2e-013
gb|CD234981.1|CD234981 SS1_19_A07.g1_A012 Salt-stressed see... 58 2e-013
gb|CD213720.1|CD213720 HS1_52_G04.g1_A012 Heat-shocked seed... 51 3e-013
gb|CW180918.1|CW180918 104_595_11163212_116_36642_070 Sorgh... 56 3e-013
gb|CW332609.1|CW332609 104_830_11481507_148_36035_010 Sorgh... 51 3e-013
gb|CW266537.1|CW266537 104_736_11232481_116_35281_009 Sorgh... 61 3e-013
gb|CW340854.1|CW340854 104_842_11486016_116_36172_096 Sorgh... 62 3e-013
gb|CW340855.1|CW340855 104_842_11486016_148_36171_096 Sorgh... 62 4e-013
gb|CW498402.1|CW498402 fsbb001f291j19k0 Sorghum methylation... 66 4e-013
gb|BI245710.1|BI245710 IP1_63_C04.b1_A002 Immature pannicle... 48 5e-013
gb|CW181597.1|CW181597 104_596_11163596_148_36653_070 Sorgh... 54 6e-013
gb|CF482272.1|CF482272 POL1_6_A05.b1_A002 Pollen Sorghum bi... 74 4e-012
gb|CW319030.1|CW319030 104_811_11474269_116_35878_055 Sorgh... 40 4e-012
gb|CW185361.1|CW185361 104_603_11166021_148_36698_095 Sorgh... 61 5e-012
gb|CW311014.1|CW311014 104_800_11470012_148_36244_010 Sorgh... 53 6e-012
gb|BH245547.1|BH245547 pSB0878 S. bicolor BTx623 PstI-diges... 68 6e-012
gb|CF428323.1|CF428323 PH1_14_C04.b1_A002 Phosphorous-defic... 60 7e-012
gb|BZ331520.1|BZ331520 hw10a10.g1 WGS-SbicolorF (JM107 adap... 73 8e-012
gb|CL160198.1|CL160198 104_350_10804807_114_31822_247 Sorgh... 73 8e-012
gb|CW072227.1|CW072227 104_325_10592141_114_30537 Sorghum m... 73 8e-012
gb|CW128866.1|CW128866 104_510_11114251_116_34758_070 Sorgh... 73 8e-012
gb|CW146117.1|CW146117 104_538_11138820_116_34979_034 Sorgh... 73 8e-012
gb|CW446801.1|CW446801 fsbb001f179k03f0 Sorghum methylation... 73 8e-012
gb|CW464925.1|CW464925 fsbb001f215g22f0 Sorghum methylation... 73 8e-012
gb|CF756413.1|CF756413 DSAF1_5_H08.b1_A011 Drought-stressed... 61 9e-012
gb|CW065144.1|CW065144 104_311_10522975_114_30118 Sorghum m... 57 1e-011
gb|CW044897.1|CW044897 104_281_10509231_115_30234 Sorghum m... 73 1e-011
gb|BI211709.1|BI211709 IP1_60_H10.g1_A002 Immature pannicle... 73 1e-011
gb|CW216905.1|CW216905 104_649_11195370_116_37128_065 Sorgh... 60 2e-011
gb|CN127950.1|CN127950 RHOH1_26_C10.b1_A002 Acid- and alkal... 72 2e-011
gb|BM317843.1|BM317843 OV1_16_B11.b9_A002 Ovary 1 (OV1) Sor... 41 3e-011
gb|BE357345.1|BE357345 DG1_148_D02.g1_A002 Dark Grown 1 (DG... 51 4e-011
gb|CW098262.1|CW098262 104_464_11002911_116_34360_052 Sorgh... 52 6e-011
gb|CW139361.1|CW139361 104_529_11135198_116_34905_055 Sorgh... 70 7e-011
gb|CW168295.1|CW168295 104_577_11154068_116_36494_066 Sorgh... 70 7e-011
gb|BG557592.1|BG557592 EM1_53_F09.g1_A002 Embryo 1 (EM1) So... 70 7e-011
gb|CW028789.1|CW028789 104_256_10499304_116_30400 Sorghum m... 40 8e-011
gb|CF756497.1|CF756497 DSAF1_5_H08.g1_A011 Drought-stressed... 69 1e-010
gb|BG947892.1|BG947892 IP1_6_F06.b1_A002 Immature pannicle ... 41 1e-010
gb|CW421199.1|CW421199 fsbb001f128o12f0 Sorghum methylation... 61 2e-010
gb|CW235079.1|CW235079 104_690_11214791_116_37407_092 Sorgh... 61 2e-010
gb|CN147160.1|CN147160 WOUND1_48_B05.b1_A002 Wounded leaves... 48 2e-010
gb|BZ367896.1|BZ367896 id07b12.b1 WGS-SbicolorF (JM107 adap... 69 2e-010
gb|CW025004.1|CW025004 104_226_10487914_116_30525 Sorghum m... 69 2e-010
gb|CW118200.1|CW118200 104_494_11108075_116_34682_038 Sorgh... 69 2e-010
gb|CW118201.1|CW118201 104_494_11108075_148_34681_038 Sorgh... 69 2e-010
gb|CW317381.1|CW317381 104_809_11473385_116_35861_077 Sorgh... 69 2e-010
gb|CW357876.1|CW357876 fsbb001f024l14k0 Sorghum methylation... 69 2e-010
gb|CW381743.1|CW381743 fsbb001f063e18f0 Sorghum methylation... 69 2e-010
gb|CW381744.1|CW381744 fsbb001f063e18k0 Sorghum methylation... 69 2e-010
gb|CW392622.1|CW392622 fsbb001f079f04k0 Sorghum methylation... 69 2e-010
gb|CW425845.1|CW425845 fsbb001f136p12f0 Sorghum methylation... 69 2e-010
gb|CW307965.1|CW307965 104_796_11468420_116_35731_076 Sorgh... 58 2e-010
gb|CW307336.1|CW307336 104_795_11468086_116_36059_089 Sorgh... 58 2e-010
gb|CW477732.1|CW477732 fsbb001f235d13k0 Sorghum methylation... 58 2e-010
gb|BG157972.1|BG157972 OV1_15_D02.b1_A002 Ovary 1 (OV1) Sor... 57 2e-010
gb|CW482651.1|CW482651 fsbb001f242n16k0 Sorghum methylation... 41 2e-010
gb|CW353194.1|CW353194 fsbb001f015n13f0 Sorghum methylation... 59 2e-010
gb|CW307092.1|CW307092 104_795_11467960_116_35729_064 Sorgh... 68 3e-010
gb|CW482650.1|CW482650 fsbb001f242n16f0 Sorghum methylation... 41 3e-010
gb|CL160199.1|CL160199 104_350_10804807_116_31823_247 Sorgh... 59 3e-010
gb|CW291263.1|CW291263 104_770_11413460_148_35562_066 Sorgh... 68 5e-010
gb|CF480844.1|CF480844 POL1_68_F11.b1_A002 Pollen Sorghum b... 68 5e-010
gb|CW317762.1|CW317762 104_809_11473586_148_35864_003 Sorgh... 46 5e-010
gb|CW044414.1|CW044414 104_280_10508936_115_30243 Sorghum m... 52 6e-010
gb|CN138728.1|CN138728 OX1_13_C08.g1_A002 Oxidatively-stres... 56 6e-010
gb|CW185512.1|CW185512 104_603_11166099_148_36698_012 Sorgh... 67 7e-010
gb|CW317777.1|CW317777 104_809_11473594_116_35860_035 Sorgh... 59 7e-010
gb|CW028788.1|CW028788 104_256_10499304_114_30399 Sorghum m... 36 1e-009
gb|BZ336368.1|BZ336368 hz33f08.g1 WGS-SbicolorF (JM107 adap... 66 1e-009
gb|CL154459.1|CL154459 104_339_10781423_116_31372_287 Sorgh... 66 1e-009
gb|CW021210.1|CW021210 104_109_10409416_114_30492 Sorghum m... 66 1e-009
gb|CW217706.1|CW217706 104_651_11195794_116_37071_047 Sorgh... 66 1e-009
gb|CW247119.1|CW247119 104_708_11221624_116_36078_064 Sorgh... 66 1e-009
gb|CW299316.1|CW299316 104_782_11463048_148_36236_092 Sorgh... 66 1e-009
gb|CW453694.1|CW453694 fsbb001f197m22f0 Sorghum methylation... 66 1e-009
gb|CW492509.1|CW492509 fsbb001f282n03f0 Sorghum methylation... 66 1e-009
gb|CL171514.1|CL171514 104_373_10889475_148_31776_147 Sorgh... 55 1e-009
gb|CD430950.1|CD430950 ETH1_6_A08.b1_A002 Ethylene-treated ... 66 2e-009
gb|CL183457.1|CL183457 104_396_10898188_116_31924_028 Sorgh... 38 2e-009
gb|CW458492.1|CW458492 fsbb001f204m20f0 Sorghum methylation... 57 2e-009
gb|U87454.1|SBU87454 Sorghum bicolor dihydroflavonol-4-redu... 57 2e-009
gb|CW410405.1|CW410405 fsbb001f105c06k0 Sorghum methylation... 48 2e-009
gb|CW266538.1|CW266538 104_736_11232481_148_35285_009 Sorgh... 52 2e-009
gb|CW025970.1|CW025970 104_227_10488502_114_30506 Sorghum m... 57 3e-009
gb|U87453.1|SBU87453 Sorghum bicolor dihydroflavonol-4-redu... 57 3e-009
gb|CL153318.1|CL153318 104_337_10780629_114_31367_261 Sorgh... 65 3e-009
gb|CW421567.1|CW421567 fsbb001f130h05k0 Sorghum methylation... 57 4e-009
gb|CW455196.1|CW455196 fsbb001f199p13k0 Sorghum methylation... 64 4e-009
gb|CW137978.1|CW137978 104_525_11119961_116_34878_071 Sorgh... 57 4e-009
gb|CX622540.1|CX622540 GABR1_64_C05.g2_A002 GA- or brassino... 51 5e-009
gb|CN143230.1|CN143230 WOUND1_14_H07.g1_A002 Wounded leaves... 51 5e-009
gb|CW486807.1|CW486807 fsbb001f252e20f0 Sorghum methylation... 49 5e-009
gb|CD428251.1|CD428251 ETH1_28_F05.g1_A002 Ethylene-treated... 51 5e-009
gb|CW393089.1|CW393089 fsbb001f079p24f0 Sorghum methylation... 49 5e-009
gb|BI141372.1|BI141372 IP1_55_B03.g1_A002 Immature pannicle... 49 5e-009
gb|CW393559.1|CW393559 fsbb001f080k20f0 Sorghum methylation... 40 6e-009
gb|CW205329.1|CW205329 104_633_11187011_116_36929_038 Sorgh... 64 6e-009
gb|CW274472.1|CW274472 104_747_11404445_116_35376_025 Sorgh... 55 1e-008
gb|CB924587.1|CB924587 ABA1_21_E12.g1_A012 Abscisic acid-tr... 58 1e-008
gb|CW487378.1|CW487378 fsbb001f253d08k0 Sorghum methylation... 53 1e-008
gb|CW305140.1|CW305140 104_790_11466160_148_37436_058 Sorgh... 62 1e-008
gb|CW390378.1|CW390378 fsbb001f076a05f0 Sorghum methylation... 62 1e-008
gb|BZ345693.1|BZ345693 ht56a04.b1 WGS-SbicolorF (JM107 adap... 62 2e-008
gb|CL162494.1|CL162494 104_354_10806443_114_31830_347 Sorgh... 62 2e-008
gb|CW491338.1|CW491338 fsbb001f281c16k0 Sorghum methylation... 62 2e-008
gb|CW269379.1|CW269379 104_740_11401813_148_36230_055 Sorgh... 62 2e-008
gb|CD427850.1|CD427850 ETH1_34_D01.g1_A002 Ethylene-treated... 57 2e-008
gb|BE355386.1|BE355386 DG1_114_D07.b2_A002 Dark Grown 1 (DG... 57 2e-008
gb|BE355300.1|BE355300 DG1_114_D07.b1_A002 Dark Grown 1 (DG... 57 2e-008
gb|CW198436.1|CW198436 104_623_11182973_148_37057_029 Sorgh... 57 2e-008
gb|BI351046.1|BI351046 IP1_69_B03.g1_A002 Immature pannicle... 39 2e-008
gb|CD206723.1|CD206723 HS1_24_D05.g1_A012 Heat-shocked seed... 62 2e-008
gb|CD428746.1|CD428746 ETH1_35_E11.g1_A002 Ethylene-treated... 57 3e-008
gb|CF433684.1|CF433684 NIT1_28_C01.g1_A002 Nitrogen-deficie... 57 3e-008
gb|CW331425.1|CW331425 104_828_11480895_148_36020_052 Sorgh... 45 3e-008
gb|CW183574.1|CW183574 104_599_11164688_116_36678_024 Sorgh... 62 3e-008
gb|AY748249.1| Sorghum bicolor voucher PI152702 NADPH-depen... 62 3e-008
gb|AY748250.1| Sorghum bicolor voucher PI213900 NADPH-depen... 62 3e-008
gb|AY748254.1| Sorghum bicolor voucher PI221655 NADPH-depen... 62 3e-008
gb|AY748258.1| Sorghum bicolor voucher NSL50744 NADPH-depen... 62 3e-008
gb|AY748259.1| Sorghum bicolor voucher NSL50875 NADPH-depen... 62 3e-008
gb|AY748271.1| Sorghum bicolor cultivar RTx430 NADPH-depend... 62 3e-008
gb|AY748273.1| Sorghum arundinaceum voucher L-WA13 NADPH-de... 62 3e-008
gb|AY748276.1| Sorghum arundinaceum voucher L-WA55 NADPH-de... 62 3e-008
gb|CX618426.1|CX618426 GABR1_39_C04.g1_A002 GA- or brassino... 57 3e-008
gb|CW311013.1|CW311013 104_800_11470012_116_36243_010 Sorgh... 57 3e-008
gb|CN131058.1|CN131058 RHOH1_45_C08.g1_A002 Acid- and alkal... 57 3e-008
gb|CN127536.1|CN127536 RHOH1_23_C08.g3_A002 Acid- and alkal... 57 3e-008
gb|BE592843.1|BE592843 WS1_91_B04.b1_A002 Water-stressed 1 ... 49 4e-008
gb|CD211972.1|CD211972 HS1_67_C09.g1_A012 Heat-shocked seed... 57 5e-008
gb|CD226588.1|CD226588 CCC1_46_C01.g1_A007 Callus culture/c... 57 5e-008
gb|CW202059.1|CW202059 104_628_11184893_116_37086_029 Sorgh... 61 6e-008
gb|CW234023.1|CW234023 104_687_11213759_116_37381_088 Sorgh... 61 6e-008
gb|CW062665.1|CW062665 104_308_10521466_1_30092 Sorghum met... 60 8e-008
gb|CW244957.1|CW244957 104_706_11220857_116_35080_079 Sorgh... 60 8e-008
gb|CW359115.1|CW359115 fsbb001f026j15k0 Sorghum methylation... 60 8e-008
gb|CW093955.1|CW093955 104_457_11000061_116_37477_091 Sorgh... 43 8e-008
gb|CW152651.1|CW152651 104_554_11144606_116_37481_063 Sorgh... 60 1e-007
gb|CW273767.1|CW273767 104_746_11404076_148_35369_074 Sorgh... 60 1e-007
gb|CW295946.1|CW295946 104_777_11461224_148_35625_088 Sorgh... 60 1e-007
gb|BG946880.1|BG946880 IP1_1_H02.g1_A002 Immature pannicle ... 59 1e-007
gb|CX606542.1|CX606542 ANR1_3_D05.g1_A002 Anaerobic roots S... 57 2e-007
gb|CW025971.1|CW025971 104_227_10488502_116_30502 Sorghum m... 59 2e-007
gb|CW037623.1|CW037623 104_269_10504449_114_30383 Sorghum m... 59 2e-007
gb|CW055477.1|CW055477 104_296_10517124_115_30175 Sorghum m... 59 2e-007
gb|CW137162.1|CW137162 104_523_11119144_148_34867_058 Sorgh... 59 2e-007
gb|CW409146.1|CW409146 fsbb001f103f11k0 Sorghum methylation... 59 2e-007
gb|CW437762.1|CW437762 fsbb001f155a19f0 Sorghum methylation... 59 2e-007
gb|CW272945.1|CW272945 104_745_11403641_148_35360_075 Sorgh... 46 3e-007
gb|CW042237.1|CW042237 104_276_10507002_116_30487 Sorghum m... 46 3e-007
gb|CW471327.1|CW471327 fsbb001f225c13k0 Sorghum methylation... 46 3e-007
gb|CW339530.1|CW339530 104_840_11485320_116_36141_092 Sorgh... 58 3e-007
gb|CD230442.1|CD230442 SS1_43_A09.g1_A012 Salt-stressed see... 55 3e-007
gb|CW205330.1|CW205330 104_633_11187011_148_36930_038 Sorgh... 58 4e-007
gb|AW286721.2|AW286721 LG1_204_E05.b1_A002 Light Grown 1 (L... 58 4e-007
gb|AW286740.2|AW286740 LG1_204_G05.b1_A002 Light Grown 1 (L... 58 4e-007
gb|AW286792.2|AW286792 LG1_206_E04.b1_A002 Light Grown 1 (L... 58 4e-007
gb|AW286810.2|AW286810 LG1_206_G04.b1_A002 Light Grown 1 (L... 58 4e-007
gb|AW565210.1|AW565210 LG1_328_G10.b1_A002 Light Grown 1 (L... 58 4e-007
gb|BE360233.1|BE360233 DG1_62_H12.b1_A002 Dark Grown 1 (DG1... 58 4e-007
gb|BE363139.1|BE363139 DG1_9_D02.g1_A002 Dark Grown 1 (DG1)... 58 4e-007
gb|CD428297.1|CD428297 ETH1_28_F02.g1_A002 Ethylene-treated... 58 4e-007
gb|CD428980.1|CD428980 ETH1_1_E04.g1_A002 Ethylene-treated ... 58 4e-007
gb|CD429768.1|CD429768 ETH1_15_C09.g1_A002 Ethylene-treated... 58 4e-007
gb|CW087810.1|CW087810 104_432_10947847_114_32550_022 Sorgh... 46 5e-007
gb|CW154051.1|CW154051 104_556_11145380_148_36352_080 Sorgh... 46 5e-007
gb|CW237680.1|CW237680 104_694_11216311_116_37393_028 Sorgh... 46 5e-007
gb|CW366040.1|CW366040 fsbb001f038n13k0 Sorghum methylation... 53 5e-007
gb|CW204386.1|CW204386 104_632_11186514_148_36919_073 Sorgh... 53 5e-007
gb|CW255741.1|CW255741 104_720_11226402_116_35131_071 Sorgh... 53 5e-007
gb|CW188144.1|CW188144 104_607_11172866_116_36724_001 Sorgh... 53 5e-007
gb|CW042236.1|CW042236 104_276_10507002_114_30476 Sorghum m... 46 5e-007
gb|CW142692.1|CW142692 104_534_11137002_116_34951_077 Sorgh... 53 5e-007
gb|CW456886.1|CW456886 fsbb001f202h04k0 Sorghum methylation... 53 5e-007
gb|CW272784.1|CW272784 104_745_11403564_148_35717_046 Sorgh... 46 5e-007
gb|CW142693.1|CW142693 104_534_11137002_148_34947_077 Sorgh... 53 5e-007
gb|CW183861.1|CW183861 104_599_11164841_116_36675_065 Sorgh... 53 5e-007
gb|CW059492.1|CW059492 104_302_10519349_114_30162 Sorghum m... 57 5e-007
gb|CW107120.1|CW107120 104_477_11096391_148_34472_062 Sorgh... 57 5e-007
gb|BM330954.1|BM330954 PIC1_67_F03.g1_A002 Pathogen-infecte... 57 5e-007
gb|CW202632.1|CW202632 104_628_11185195_116_37086_066 Sorgh... 46 6e-007
gb|BZ366510.1|BZ366510 ic97e06.b1 WGS-SbicolorF (JM107 adap... 50 6e-007
gb|CW413255.1|CW413255 fsbb001f112e23f0 Sorghum methylation... 46 6e-007
gb|CW101233.1|CW101233 104_469_11004532_116_34405_016 Sorgh... 50 6e-007
gb|CW377685.1|CW377685 fsbb001f056b22k0 Sorghum methylation... 43 6e-007
gb|CL156052.1|CL156052 104_342_10782584_116_31474_296 Sorgh... 55 7e-007
gb|CW051454.1|CW051454 104_291_10515256_115_30196 Sorghum m... 57 7e-007
gb|CW162184.1|CW162184 104_569_11150811_148_36439_010 Sorgh... 57 7e-007
gb|CW214121.1|CW214121 104_646_11193848_148_37053_032 Sorgh... 57 7e-007
gb|CW392942.1|CW392942 fsbb001f079m16f0 Sorghum methylation... 57 7e-007
gb|CW394909.1|CW394909 fsbb001f082l15k0 Sorghum methylation... 57 7e-007
gb|CW445808.1|CW445808 fsbb001f171c17f0 Sorghum methylation... 57 7e-007
gb|CW454707.1|CW454707 fsbb001f199e17f0 Sorghum methylation... 47 7e-007
gb|CW035716.1|CW035716 104_266_10503324_115_30377 Sorghum m... 57 1e-006
gb|CW048648.1|CW048648 104_287_10513535_115_30213 Sorghum m... 57 1e-006
gb|CW137979.1|CW137979 104_525_11119961_148_34874_071 Sorgh... 57 1e-006
gb|CW157826.1|CW157826 104_561_11147730_116_36390_073 Sorgh... 57 1e-006
gb|CW187325.1|CW187325 104_605_11167031_116_36713_086 Sorgh... 57 1e-006
gb|CW305030.1|CW305030 104_790_11466100_148_37436_012 Sorgh... 57 1e-006
gb|CW414433.1|CW414433 fsbb001f114b12f0 Sorghum methylation... 57 1e-006
gb|CW414434.1|CW414434 fsbb001f114b12k0 Sorghum methylation... 57 1e-006
gb|BG052966.1|BG052966 RHIZ2_15_F06.b1_A003 Rhizome2 (RHIZ2... 57 1e-006
gb|CF430921.1|CF430921 NIT1_1_B07.g1_A002 Nitrogen-deficien... 57 1e-006
gb|CW037253.1|CW037253 104_268_10504232_115_30382 Sorghum m... 42 1e-006
gb|CW062666.1|CW062666 104_308_10521466_5_30097 Sorghum met... 56 1e-006
gb|CW178159.1|CW178159 104_591_11159411_116_36611_036 Sorgh... 56 1e-006
gb|CW353195.1|CW353195 fsbb001f015n13k0 Sorghum methylation... 56 1e-006
gb|CW442450.1|CW442450 fsbb001f162c02f0 Sorghum methylation... 56 1e-006
gb|CF757896.1|CF757896 DSAF1_24_D08.g1_A011 Drought-stresse... 56 1e-006
gb|CF761240.1|CF761240 DSAF1_72_G09.b1_A011 Drought-stresse... 56 1e-006
gb|CF771558.1|CF771558 DSBF1_21_A10.g1_A010 Drought-stresse... 56 1e-006
gb|CX619593.1|CX619593 GABR1_46_B10.g1_A002 GA- or brassino... 56 1e-006
gb|CW489883.1|CW489883 fsbb001f275a24k0 Sorghum methylation... 56 2e-006
gb|CW173888.1|CW173888 104_585_11157092_116_36552_068 Sorgh... 55 3e-006
gb|CW318440.1|CW318440 104_810_11473950_148_35870_021 Sorgh... 55 3e-006
gb|CW322500.1|CW322500 104_816_11476130_116_35950_009 Sorgh... 55 3e-006
gb|CW264119.1|CW264119 104_732_11231103_116_35239_052 Sorgh... 55 4e-006
gb|CW343509.1|CW343509 104_845_11487459_116_36181_002 Sorgh... 55 4e-006
gb|CW343510.1|CW343510 104_845_11487459_148_36182_002 Sorgh... 55 4e-006
gb|CW388882.1|CW388882 fsbb001f073n09k0 Sorghum methylation... 55 4e-006
gb|CW404126.1|CW404126 fsbb001f096c09k0 Sorghum methylation... 55 4e-006
gb|CB925713.1|CB925713 ABA1_23_F05.b1_A012 Abscisic acid-tr... 55 4e-006
gb|CW089593.1|CW089593 104_435_10948797_114_32596_095 Sorgh... 54 5e-006
gb|CW089594.1|CW089594 104_435_10948797_116_32594_095 Sorgh... 54 5e-006
gb|CW097532.1|CW097532 104_463_11002508_116_34347_070 Sorgh... 54 5e-006
gb|CW138853.1|CW138853 104_528_11134920_116_34889_084 Sorgh... 54 5e-006
gb|CW231855.1|CW231855 104_681_11211347_116_37347_044 Sorgh... 54 5e-006
gb|CW281027.1|CW281027 104_756_11407949_116_35451_023 Sorgh... 54 5e-006
gb|CW316348.1|CW316348 104_807_11472847_148_35846_020 Sorgh... 54 5e-006
gb|CW320108.1|CW320108 104_813_11474839_148_35894_032 Sorgh... 54 5e-006
gb|BG102148.1|BG102148 RHIZ2_21_D08.b1_A003 Rhizome2 (RHIZ2... 54 5e-006
gb|AY748251.1| Sorghum bicolor voucher PI22913 NADPH-depend... 54 5e-006
gb|AY748252.1| Sorghum bicolor voucher PI221540 NADPH-depen... 54 5e-006
gb|AY748253.1| Sorghum bicolor voucher PI221607 NADPH-depen... 54 5e-006
gb|AY748255.1| Sorghum bicolor voucher PI257595 NADPH-depen... 54 5e-006
gb|AY748256.1| Sorghum bicolor voucher PI267525 NADPH-depen... 54 5e-006
gb|AY748257.1| Sorghum bicolor voucher PI287624 NADPH-depen... 54 5e-006
gb|AY748260.1| Sorghum bicolor voucher NSL51032 NADPH-depen... 54 5e-006
gb|AY748261.1| Sorghum bicolor voucher NSL51365 NADPH-depen... 54 5e-006
gb|AY748262.1| Sorghum bicolor voucher NSL51397 NADPH-depen... 54 5e-006
gb|AY748263.1| Sorghum bicolor voucher NSL51836 NADPH-depen... 54 5e-006
gb|AY748264.1| Sorghum bicolor voucher PI510906 NADPH-depen... 54 5e-006
gb|AY748265.1| Sorghum bicolor voucher PI510985 NADPH-depen... 54 5e-006
gb|AY748266.1| Sorghum bicolor voucher NSL55751 NADPH-depen... 54 5e-006
gb|AY748267.1| Sorghum bicolor voucher NSL77034 NADPH-depen... 54 5e-006
gb|AY748268.1| Sorghum bicolor voucher NSL83707 NADPH-depen... 54 5e-006
gb|AY748269.1| Sorghum bicolor voucher NSL87088 NADPH-depen... 54 5e-006
gb|AY748270.1| Sorghum bicolor cultivar BTx623 NADPH-depend... 54 5e-006
gb|AY748272.1| Sorghum x drummondii voucher L-WA12 NADPH-de... 54 5e-006
gb|AY748274.1| Sorghum arundinaceum voucher IS14235 NADPH-d... 54 5e-006
gb|AY748275.1| Sorghum arundinaceum voucher IS14252 NADPH-d... 54 5e-006
gb|AY748277.1| Sorghum x drummondii voucher L-WA71 clone a ... 54 5e-006
gb|AY748278.1| Sorghum x drummondii voucher L-WA71 clone b ... 54 5e-006
gb|CL177973.1|CL177973 104_385_10894224_148_31913_288 Sorgh... 54 7e-006
gb|CL178820.1|CL178820 104_387_10894861_116_31906_157 Sorgh... 54 7e-006
gb|CW093956.1|CW093956 104_457_11000061_148_37478_091 Sorgh... 54 7e-006
gb|CW154973.1|CW154973 104_557_11145888_116_36362_092 Sorgh... 54 7e-006
gb|CW192819.1|CW192819 104_615_11179234_148_36775_041 Sorgh... 54 7e-006
gb|CD213624.1|CD213624 HS1_52_G04.b1_A012 Heat-shocked seed... 54 7e-006
gb|CL168086.1|CL168086 104_365_10810552_114_31804_232 Sorgh... 40 9e-006
gb|CW178160.1|CW178160 104_591_11159411_148_36612_036 Sorgh... 53 9e-006
gb|CW171844.1|CW171844 104_582_11155957_116_36529_051 Sorgh... 48 1e-005
gb|CW188268.1|CW188268 104_608_11172940_148_36735_016 Sorgh... 53 1e-005
gb|CW402223.1|CW402223 fsbb001f093g16f0 Sorghum methylation... 53 1e-005
gb|CW500705.1|CW500705 fsbb001f296c10f0 Sorghum methylation... 53 1e-005
gb|CW502335.1|CW502335 fsbb001f298j21f0 Sorghum methylation... 53 1e-005
gb|CD212404.1|CD212404 HS1_5_G01.b1_A012 Heat-shocked seedl... 53 1e-005
gb|CW261808.1|CW261808 104_729_11229713_148_35203_077 Sorgh... 52 2e-005
gb|BE361301.1|BE361301 DG1_71_C06.b1_A002 Dark Grown 1 (DG1... 51 2e-005
gb|CL154458.1|CL154458 104_339_10781423_114_31371_287 Sorgh... 33 2e-005
gb|CW065145.1|CW065145 104_311_10522975_115_30121 Sorghum m... 52 2e-005
gb|CW287085.1|CW287085 104_765_11411232_148_35528_096 Sorgh... 42 3e-005
gb|CW192510.1|CW192510 104_615_11179063_148_36770_032 Sorgh... 40 3e-005
gb|CL187082.1|CL187082 104_402_10900637_116_32436_025 Sorgh... 40 3e-005
gb|CW410404.1|CW410404 fsbb001f105c06f0 Sorghum methylation... 40 3e-005
gb|CW393560.1|CW393560 fsbb001f080k20k0 Sorghum methylation... 40 3e-005
gb|CW394908.1|CW394908 fsbb001f082l15f0 Sorghum methylation... 50 4e-005
gb|CW032687.1|CW032687 104_261_10501528_114_30363 Sorghum m... 51 4e-005
gb|CN138002.1|CN138002 OX1_61_D06.b1_A002 Oxidatively-stres... 51 4e-005
gb|CW206175.1|CW206175 104_634_11187455_116_36955_084 Sorgh... 50 5e-005
gb|CW206176.1|CW206176 104_634_11187455_148_36956_084 Sorgh... 50 5e-005
gb|CW065682.1|CW065682 104_312_10523281_115_30130 Sorghum m... 50 5e-005
gb|CW222310.1|CW222310 104_657_11202308_116_37448_068 Sorgh... 51 6e-005
gb|CW222311.1|CW222311 104_657_11202308_148_37449_068 Sorgh... 51 6e-005
gb|BG048279.1|BG048279 OV1_16_B11.g1_A002 Ovary 1 (OV1) Sor... 51 6e-005
gb|CW494629.1|CW494629 fsbb001f286a06k0 Sorghum methylation... 50 7e-005
gb|CL180568.1|CL180568 104_390_10896117_116_31930_261 Sorgh... 50 8e-005
gb|CL194505.1|CL194505 104_419_10941681_114_32294_047 Sorgh... 50 8e-005
gb|CW326863.1|CW326863 104_822_11478441_148_35970_041 Sorgh... 50 8e-005
gb|CW421566.1|CW421566 fsbb001f130h05f0 Sorghum methylation... 50 8e-005
gb|BG048220.1|BG048220 OV1_15_D02.g1_A002 Ovary 1 (OV1) Sor... 50 8e-005
gb|CD210153.1|CD210153 HS1_57_A09.b1_A012 Heat-shocked seed... 50 8e-005
gb|CD461540.1|CD461540 SA1_32_D01.g2_A002 Salicylic acid-tr... 50 8e-005
gb|CW237055.1|CW237055 104_693_11215954_148_37516_043 Sorgh... 38 9e-005
gb|CW168296.1|CW168296 104_577_11154068_148_36493_066 Sorgh... 39 9e-005
gb|CW403429.1|CW403429 fsbb001f095c10f0 Sorghum methylation... 39 9e-005
gb|CW177154.1|CW177154 104_590_11158870_148_36592_089 Sorgh... 38 9e-005
gb|CW139362.1|CW139362 104_529_11135198_148_34909_055 Sorgh... 39 9e-005
gb|BZ349735.1|BZ349735 hr45b01.g1 WGS-SbicolorF (JM107 adap... 39 9e-005
gb|CW037624.1|CW037624 104_269_10504449_115_30384 Sorghum m... 38 9e-005
gb|CW454891.1|CW454891 fsbb001f199i19k0 Sorghum methylation... 40 1e-004
gb|BI212004.1|BI212004 IP1_63_C04.g1_A002 Immature pannicle... 37 2e-004
gb|CW486984.1|CW486984 fsbb001f252j04f0 Sorghum methylation... 36 2e-004
gb|CL180569.1|CL180569 104_390_10896117_148_31929_261 Sorgh... 49 2e-004
gb|CW082690.1|CW082690 104_425_10943954_116_32355_015 Sorgh... 49 2e-004
gb|CW314080.1|CW314080 104_804_11471631_148_35796_054 Sorgh... 49 2e-004
gb|CW329705.1|CW329705 104_826_11479984_148_35993_058 Sorgh... 49 2e-004
gb|CW332057.1|CW332057 104_829_11481224_116_36032_022 Sorgh... 49 2e-004
gb|CW332058.1|CW332058 104_829_11481224_148_36029_022 Sorgh... 49 2e-004
gb|CW370968.1|CW370968 fsbb001f046d06f0 Sorghum methylation... 49 2e-004
gb|CW399967.1|CW399967 fsbb001f090a19k0 Sorghum methylation... 49 2e-004
gb|CW461121.1|CW461121 fsbb001f208k06k0 Sorghum methylation... 49 2e-004
gb|CW468672.1|CW468672 fsbb001f220p17k0 Sorghum methylation... 49 2e-004
gb|CW486808.1|CW486808 fsbb001f252e20k0 Sorghum methylation... 49 2e-004
gb|BI351260.1|BI351260 IP1_69_B03.b1_A002 Immature pannicle... 48 3e-004
gb|CB926712.1|CB926712 ABA1_10_G05.b1_A012 Abscisic acid-tr... 48 3e-004
gb|CN145595.1|CN145595 WOUND1_34_B03.b1_A002 Wounded leaves... 48 3e-004
gb|CW158862.1|CW158862 104_564_11149052_148_36401_068 Sorgh... 39 4e-004
gb|CN147713.1|CN147713 WOUND1_51_D09.g1_A002 Wounded leaves... 39 4e-004
gb|CW306978.1|CW306978 104_792_11467133_148_35715_017 Sorgh... 39 4e-004
gb|CW306977.1|CW306977 104_792_11467133_116_35711_017 Sorgh... 39 4e-004
gb|CB926331.1|CB926331 ABA1_7_F02.g1_A012 Abscisic acid-tre... 39 4e-004
gb|CW059493.1|CW059493 104_302_10519349_115_30168 Sorghum m... 48 4e-004
gb|CD429056.1|CD429056 ETH1_2_G04.b1_A002 Ethylene-treated ... 48 4e-004
gb|CW232513.1|CW232513 104_685_11212859_116_37488_044 Sorgh... 37 5e-004
gb|CW437870.1|CW437870 fsbb001f155d09f0 Sorghum methylation... 37 5e-004
gb|CW456089.1|CW456089 fsbb001f201e14k0 Sorghum methylation... 47 6e-004
gb|CW466289.1|CW466289 fsbb001f217h13f0 Sorghum methylation... 47 6e-004
>gb|AW922257.1|AW922257 DG1_17_G01.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 559
Score = 358 bits (777), Expect = 9e-098
Identities = 144/166 (86%), Positives = 148/166 (89%)
Frame = +3 / +2
Query: 186 VTGAGGFIASWLVKRLLEKGYTVRGTVRNPVDPKNDHLRALDGXXXXXXXXXXXXXXPQS 365
VTGAGGFIASWLVKRLLEKGYTVRGTVRNPVDPKNDHLRALDG P+S
Sbjct: 11 VTGAGGFIASWLVKRLLEKGYTVRGTVRNPVDPKNDHLRALDGAADRLVLLRADLLDPES 190
Query: 366 LAEAFSGCDGVFHAASPVTDDPEMMIEPAIRGTRYVMAAADDAGVKRVVFTSSIGTVYMN 545
L EAFSGCDGVFHAASPVTDDPEMMIEPAIRGT+YVM AA D GVKRVVFTSSIGTVYMN
Sbjct: 191 LVEAFSGCDGVFHAASPVTDDPEMMIEPAIRGTQYVMTAAADTGVKRVVFTSSIGTVYMN 370
Query: 546 PYRDPSKPVDDTCWSDLEYCKNTQNWYCYAKTVAEQGAWEVARKRG 683
PYR+P+KPVDDTCWSDLEYCKNTQNWYCYAKTVAEQGAWEVARKRG
Sbjct: 371 PYREPNKPVDDTCWSDLEYCKNTQNWYCYAKTVAEQGAWEVARKRG 508
Score = 268 bits (579), Expect = 2e-070
Identities = 121/159 (76%), Positives = 122/159 (76%)
Frame = -2 / -2
Query: 661 HAPCSATVLA*QYQFWVFLQYSRSLQQVSSTGLLGSR*GFMYTVPMEDVNTTRFTPASSA 482
HAPCSATVLA*QYQF VFLQYSRSLQQVSSTGLLGSR*GFMYTVPMEDVNTTR TP S+A
Sbjct: 486 HAPCSATVLA*QYQFCVFLQYSRSLQQVSSTGLLGSR*GFMYTVPMEDVNTTRLTPVSAA 307
Query: 481 AAIT*RVPRXXXXXXXXXXSVTGEAAWKTPSQPEKASARLCGXXXXXXXXXXXXXXXXXX 302
A IT VPR SVTGEAAWKTPSQPEKAS RL G
Sbjct: 306 AVITYCVPRIAGSIIISGSSVTGEAAWKTPSQPEKASTRLSGSSRSARRRTRRSAAPSRA 127
Query: 301 XRWSFFGSTGFLTVPRTV*PFSRRRLTSQEAMNPPAPVT 185
RWSFFGSTGFLTVPRTV*PFSRRRLTSQEAMNPPAPVT
Sbjct: 126 LRWSFFGSTGFLTVPRTV*PFSRRRLTSQEAMNPPAPVT 10
Score = 214 bits (461), Expect = 4e-054
Identities = 91/138 (65%), Positives = 101/138 (73%)
Frame = -1 / -1
Query: 596 EVAPAGVVHRLXXXXXXXXXXXXXXGREHDALHSGXXXXXXXXXXAPDRWLDHHLRVIGD 417
++APAGVV RL GREHDAL +G APD WLDHHLRVIGD
Sbjct: 421 KIAPAGVVDRLVGFTVGVHVHCADGGREHDALDAGVCRRRHHILCAPDCWLDHHLRVIGD 242
Query: 416 RGGGVEDAVTAGEGLGKALWVQQVGAEEDETVDGAVKGPQVVVLWIHRVPDRAADCVALL 237
RGGGVEDAV AGEGL KA W+QQ+G +EDE + GAVKGPQVVVLWI RVPDRA DCV LL
Sbjct: 241 RGGGVEDAVAAGEGLDKAFWIQQIGTQEDEAIGGAVKGPQVVVLWIDRVPDRATDCVTLL 62
Query: 236 QEALDEPGGNEPSSSGHA 183
+EALD+PGG+EPSSSG A
Sbjct: 61 EEALDKPGGDEPSSSGDA 8
Score = 82.6 bits (174), Expect(2) = 4e-026
Identities = 38/60 (63%), Positives = 39/60 (65%)
Frame = +1 / +3
Query: 190 PELEGSLPPGSSSASWRRATQSAARSGTLWIQRTTT*GPLXXXXXXXXXXXXXCWTHRAL 369
PELEGS PPG SSAS RR TQS ARSGTL IQRTTT*GPL CW +AL
Sbjct: 15 PELEGSSPPGLSSASSRRVTQSVARSGTLSIQRTTT*GPLTAPPIASSSCVPICWIQKAL 194
Score = 66.1 bits (138), Expect = 1e-009
Identities = 26/31 (83%), Positives = 26/31 (83%)
Frame = +2 / +1
Query: 197 WRVHCLLARQAPPGEGLHSPRHGQEPCGSKE 289
WRVH LLA QAPP EGLHSP HGQEPC SKE
Sbjct: 22 WRVHRLLACQAPPREGLHSPWHGQEPCRSKE 114
Score = 60.6 bits (126), Expect(2) = 4e-026
Identities = 27/33 (81%), Positives = 28/33 (84%)
Frame = +2 / +1
Query: 542 EPLP*PQQACGRHLLERPRVLQEHPELVLLRQD 640
EPLP* QQAC RHLLER VLQE+ ELVLLRQD
Sbjct: 367 EPLP*TQQACRRHLLERS*VLQEYTELVLLRQD 465
Score = 52.8 bits (109), Expect(2) = 7e-009
Identities = 19/23 (82%), Positives = 20/23 (86%)
Frame = -3 / -3
Query: 609 SCNTRGRSSRCRPQACWGHGRGS 541
SCNT+ RSSRCR QACW HGRGS
Sbjct: 434 SCNTQDRSSRCRRQACWVHGRGS 366
Score = 32.2 bits (64), Expect(2) = 7e-009
Identities = 12/15 (80%), Positives = 13/15 (86%)
Frame = -3 / -3
Query: 288 SLDPQGS*PCRGLCS 244
SLD QGS*PC GLC+
Sbjct: 113 SLDRQGS*PCHGLCN 69
>gb|CF429087.1|CF429087 PH1_19_G12.g1_A002 Phosphorous-deficient seedlings Sorghum bicolor
cDNA clone PH1_19_G12_A002 5', mRNA sequence
Length = 721
Score = 341 bits (739), Expect = 2e-092
Identities = 136/159 (85%), Positives = 141/159 (88%)
Frame = +3 / +2
Query: 162 SGQGRTVCVTGAGGFIASWLVKRLLEKGYTVRGTVRNPVDPKNDHLRALDGXXXXXXXXX 341
SGQGRTVCVTGAGGFIASWLVKRLLEKGYTVRGTVRNPVDPKNDHLRALDG
Sbjct: 245 SGQGRTVCVTGAGGFIASWLVKRLLEKGYTVRGTVRNPVDPKNDHLRALDGAADRLVLLR 424
Query: 342 XXXXXPQSLAEAFSGCDGVFHAASPVTDDPEMMIEPAIRGTRYVMAAADDAGVKRVVFTS 521
P+SL EAFSGCDGVFHAASPVTDDPEMMIEPAIRGT+YVM AA D GVKRVVFTS
Sbjct: 425 ADLLDPESLVEAFSGCDGVFHAASPVTDDPEMMIEPAIRGTQYVMTAAADTGVKRVVFTS 604
Query: 522 SIGTVYMNPYRDPSKPVDDTCWSDLEYCKNTQNWYCYAK 638
SIGTVY+NPYR+P+KPVDDTCWSDLEYCKNTQNWYCYAK
Sbjct: 605 SIGTVYVNPYREPNKPVDDTCWSDLEYCKNTQNWYCYAK 721
Score = 266 bits (575), Expect(2) = 4e-071
Identities = 120/159 (75%), Positives = 121/159 (76%)
Frame = -2 / -2
Query: 637 LA*QYQFWVFLQYSRSLQQVSSTGLLGSR*GFMYTVPMEDVNTTRFTPASSAAAIT*RVP 458
LA*QYQF VFLQYSRSLQQVSSTGLLGSR*GF YTVPMEDVNTTR TP S+AA IT VP
Sbjct: 720 LA*QYQFCVFLQYSRSLQQVSSTGLLGSR*GFTYTVPMEDVNTTRLTPVSAAAVITYCVP 541
Query: 457 RXXXXXXXXXXSVTGEAAWKTPSQPEKASARLCGXXXXXXXXXXXXXXXXXXXRWSFFGS 278
R SVTGEAAWKTPSQPEKAS RL G RWSFFGS
Sbjct: 540 RIAGSIIISGSSVTGEAAWKTPSQPEKASTRLSGSSRSARRRTRRSAAPSRALRWSFFGS 361
Query: 277 TGFLTVPRTV*PFSRRRLTSQEAMNPPAPVTQTVRPCPE 161
TGFLTVPRTV*PFSRRRLTSQEAMNPPAPVTQTVRPCPE
Sbjct: 360 TGFLTVPRTV*PFSRRRLTSQEAMNPPAPVTQTVRPCPE 244
Score = 216 bits (467), Expect = 5e-055
Identities = 92/139 (66%), Positives = 102/139 (73%)
Frame = -1 / -1
Query: 596 EVAPAGVVHRLXXXXXXXXXXXXXXGREHDALHSGXXXXXXXXXXAPDRWLDHHLRVIGD 417
++APAGVV RL GREHDAL +G APD WLDHHLRVIGD
Sbjct: 679 KIAPAGVVDRLVGFTVGVHVHCADGGREHDALDAGVCRRRHHILCAPDCWLDHHLRVIGD 500
Query: 416 RGGGVEDAVTAGEGLGKALWVQQVGAEEDETVDGAVKGPQVVVLWIHRVPDRAADCVALL 237
RGGGVEDAV AGEGL KA W+QQ+G +EDE + GAVKGPQVVVLWI RVPDRA DCV LL
Sbjct: 499 RGGGVEDAVAAGEGLDKAFWIQQIGTQEDEAIGGAVKGPQVVVLWIDRVPDRATDCVTLL 320
Query: 236 QEALDEPGGNEPSSSGHAN 180
+EALD+PGG+EPSSSG AN
Sbjct: 319 EEALDKPGGDEPSSSGDAN 263
Score = 85.4 bits (180), Expect(2) = 6e-026
Identities = 40/63 (63%), Positives = 41/63 (65%)
Frame = +1 / +3
Query: 181 FA*PELEGSLPPGSSSASWRRATQSAARSGTLWIQRTTT*GPLXXXXXXXXXXXXXCWTH 360
FA PELEGS PPG SSAS RR TQS ARSGTL IQRTTT*GPL CW
Sbjct: 264 FASPELEGSSPPGLSSASSRRVTQSVARSGTLSIQRTTT*GPLTAPPIASSSCVPICWIQ 443
Query: 361 RAL 369
+AL
Sbjct: 444 KAL 452
Score = 66.1 bits (138), Expect = 1e-009
Identities = 26/31 (83%), Positives = 26/31 (83%)
Frame = +2 / +1
Query: 197 WRVHCLLARQAPPGEGLHSPRHGQEPCGSKE 289
WRVH LLA QAPP EGLHSP HGQEPC SKE
Sbjct: 280 WRVHRLLACQAPPREGLHSPWHGQEPCRSKE 372
Score = 57.9 bits (120), Expect(2) = 6e-026
Identities = 26/32 (81%), Positives = 27/32 (84%)
Frame = +2 / +1
Query: 542 EPLP*PQQACGRHLLERPRVLQEHPELVLLRQ 637
EPLP* QQAC RHLLER VLQE+ ELVLLRQ
Sbjct: 625 EPLP*TQQACRRHLLERS*VLQEYTELVLLRQ 720
Score = 52.8 bits (109), Expect(2) = 9e-009
Identities = 19/23 (82%), Positives = 20/23 (86%)
Frame = -3 / -3
Query: 609 SCNTRGRSSRCRPQACWGHGRGS 541
SCNT+ RSSRCR QACW HGRGS
Sbjct: 692 SCNTQDRSSRCRRQACWVHGRGS 624
Score = 32.2 bits (64), Expect(2) = 9e-009
Identities = 12/15 (80%), Positives = 13/15 (86%)
Frame = -3 / -3
Query: 288 SLDPQGS*PCRGLCS 244
SLD QGS*PC GLC+
Sbjct: 371 SLDRQGS*PCHGLCN 327
Score = 24.9 bits (48), Expect(2) = 4e-071
Identities = 6/6 (100%), Positives = 6/6 (100%)
Frame = -1 / -1
Query: 128 CCWHPS 111
CCWHPS
Sbjct: 214 CCWHPS 197
>gb|BE125424.1|BE125424 DG1_25_G01.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 487
Score = 322 bits (698), Expect = 7e-087
Identities = 129/152 (84%), Positives = 133/152 (87%)
Frame = +3 / +2
Query: 186 VTGAGGFIASWLVKRLLEKGYTVRGTVRNPVDPKNDHLRALDGXXXXXXXXXXXXXXPQS 365
VTGAGGFIASWLVKRLLEKGYTVRGTVRNPVDPKNDHLRALDG P+S
Sbjct: 11 VTGAGGFIASWLVKRLLEKGYTVRGTVRNPVDPKNDHLRALDGAADRLVLLRADLLDPES 190
Query: 366 LAEAFSGCDGVFHAASPVTDDPEMMIEPAIRGTRYVMAAADDAGVKRVVFTSSIGTVYMN 545
L EAFSGCDGVFHAASPVTDDPEMMIEPAIRGT+YVM AA D GVKRVVFTSSIGTVYMN
Sbjct: 191 LVEAFSGCDGVFHAASPVTDDPEMMIEPAIRGTQYVMTAAADTGVKRVVFTSSIGTVYMN 370
Query: 546 PYRDPSKPVDDTCWSDLEYCKNTQNWYCYAKT 641
PYR+P+KPVDDTCWSDLEYC NTQNWYCYAKT
Sbjct: 371 PYREPNKPVDDTCWSDLEYCXNTQNWYCYAKT 466
Score = 248 bits (537), Expect = 1e-064
Identities = 114/157 (72%), Positives = 115/157 (73%)
Frame = -2 / -2
Query: 655 PCSATVLA*QYQFWVFLQYSRSLQQVSSTGLLGSR*GFMYTVPMEDVNTTRFTPASSAAA 476
P VLA*QYQF VF QYSRSLQQVSSTGLLGSR*GFMYTVPMEDVNTTR TP S+AA
Sbjct: 480 PAPPPVLA*QYQFCVFXQYSRSLQQVSSTGLLGSR*GFMYTVPMEDVNTTRLTPVSAAAV 301
Query: 475 IT*RVPRXXXXXXXXXXSVTGEAAWKTPSQPEKASARLCGXXXXXXXXXXXXXXXXXXXR 296
IT VPR SVTGEAAWKTPSQPEKAS RL G R
Sbjct: 300 ITYCVPRIAGSIIISGSSVTGEAAWKTPSQPEKASTRLSGSSRSARRRTRRSAAPSRALR 121
Query: 295 WSFFGSTGFLTVPRTV*PFSRRRLTSQEAMNPPAPVT 185
WSFFGSTGFLTVPRTV*PFSRRRLTSQEAMNPPAPVT
Sbjct: 120 WSFFGSTGFLTVPRTV*PFSRRRLTSQEAMNPPAPVT 10
Score = 214 bits (461), Expect = 4e-054
Identities = 91/138 (65%), Positives = 101/138 (73%)
Frame = -1 / -1
Query: 596 EVAPAGVVHRLXXXXXXXXXXXXXXGREHDALHSGXXXXXXXXXXAPDRWLDHHLRVIGD 417
++APAGVV RL GREHDAL +G APD WLDHHLRVIGD
Sbjct: 421 KIAPAGVVDRLVGFTVGVHVHCADGGREHDALDAGVCRRRHHILCAPDCWLDHHLRVIGD 242
Query: 416 RGGGVEDAVTAGEGLGKALWVQQVGAEEDETVDGAVKGPQVVVLWIHRVPDRAADCVALL 237
RGGGVEDAV AGEGL KA W+QQ+G +EDE + GAVKGPQVVVLWI RVPDRA DCV LL
Sbjct: 241 RGGGVEDAVAAGEGLDKAFWIQQIGTQEDEAIGGAVKGPQVVVLWIDRVPDRATDCVTLL 62
Query: 236 QEALDEPGGNEPSSSGHA 183
+EALD+PGG+EPSSSG A
Sbjct: 61 EEALDKPGGDEPSSSGDA 8
Score = 82.6 bits (174), Expect(2) = 2e-025
Identities = 38/60 (63%), Positives = 39/60 (65%)
Frame = +1 / +3
Query: 190 PELEGSLPPGSSSASWRRATQSAARSGTLWIQRTTT*GPLXXXXXXXXXXXXXCWTHRAL 369
PELEGS PPG SSAS RR TQS ARSGTL IQRTTT*GPL CW +AL
Sbjct: 15 PELEGSSPPGLSSASSRRVTQSVARSGTLSIQRTTT*GPLTAPPIASSSCVPICWIQKAL 194
Score = 66.1 bits (138), Expect = 1e-009
Identities = 26/31 (83%), Positives = 26/31 (83%)
Frame = +2 / +1
Query: 197 WRVHCLLARQAPPGEGLHSPRHGQEPCGSKE 289
WRVH LLA QAPP EGLHSP HGQEPC SKE
Sbjct: 22 WRVHRLLACQAPPREGLHSPWHGQEPCRSKE 114
Score = 57.9 bits (120), Expect(2) = 2e-025
Identities = 26/33 (78%), Positives = 27/33 (81%)
Frame = +2 / +1
Query: 542 EPLP*PQQACGRHLLERPRVLQEHPELVLLRQD 640
EPLP* QQAC RHLLER VL E+ ELVLLRQD
Sbjct: 367 EPLP*TQQACRRHLLERS*VLXEYTELVLLRQD 465
Score = 52.8 bits (109), Expect(2) = 6e-009
Identities = 19/23 (82%), Positives = 20/23 (86%)
Frame = -3 / -3
Query: 609 SCNTRGRSSRCRPQACWGHGRGS 541
SCNT+ RSSRCR QACW HGRGS
Sbjct: 434 SCNTQDRSSRCRRQACWVHGRGS 366
Score = 32.2 bits (64), Expect(2) = 6e-009
Identities = 12/15 (80%), Positives = 13/15 (86%)
Frame = -3 / -3
Query: 288 SLDPQGS*PCRGLCS 244
SLD QGS*PC GLC+
Sbjct: 113 SLDRQGS*PCHGLCN 69
>gb|CF432928.1|CF432928 NIT1_19_B11.g1_A002 Nitrogen-deficient seedlings Sorghum bicolor
cDNA clone NIT1_19_B11_A002 5', mRNA sequence
Length = 700
Score = 318 bits (689), Expect = 1e-085
Identities = 129/151 (85%), Positives = 133/151 (88%)
Frame = +3 / +2
Query: 162 SGQGRTVCVTGAGGFIASWLVKRLLEKGYTVRGTVRNPVDPKNDHLRALDGXXXXXXXXX 341
SGQGRTVCVTGAGGFIASWLVKRLLEKGYTVRGTVRNPVDPKNDHLRALDG
Sbjct: 248 SGQGRTVCVTGAGGFIASWLVKRLLEKGYTVRGTVRNPVDPKNDHLRALDGAADRLVLLR 427
Query: 342 XXXXXPQSLAEAFSGCDGVFHAASPVTDDPEMMIEPAIRGTRYVMAAADDAGVKRVVFTS 521
P+SL EAFSGCDGVFHAASPVTDDPEMMIEPAIRGT+YVM AA D GVKRVVFTS
Sbjct: 428 ADLLDPESLVEAFSGCDGVFHAASPVTDDPEMMIEPAIRGTQYVMTAAADTGVKRVVFTS 607
Query: 522 SIGTVYMNPYRDPSKPVDDTCWSDLEYCKNT 614
SIGTVYMNPYR+P+KPVDDTCWSDLEYCKNT
Sbjct: 608 SIGTVYMNPYREPNKPVDDTCWSDLEYCKNT 700
Score = 255 bits (551), Expect(2) = 8e-068
Identities = 114/151 (75%), Positives = 115/151 (76%)
Frame = -2 / -2
Query: 613 VFLQYSRSLQQVSSTGLLGSR*GFMYTVPMEDVNTTRFTPASSAAAIT*RVPRXXXXXXX 434
VFLQYSRSLQQVSSTGLLGSR*GFMYTVPMEDVNTTR TP S+AA IT VPR
Sbjct: 699 VFLQYSRSLQQVSSTGLLGSR*GFMYTVPMEDVNTTRLTPVSAAAVITYCVPRIAGSIII 520
Query: 433 XXXSVTGEAAWKTPSQPEKASARLCGXXXXXXXXXXXXXXXXXXXRWSFFGSTGFLTVPR 254
SVTGEAAWKTPSQPEKAS RL G RWSFFGSTGFLTVPR
Sbjct: 519 SGSSVTGEAAWKTPSQPEKASTRLSGSSRSARRRTRRSAAPSRALRWSFFGSTGFLTVPR 340
Query: 253 TV*PFSRRRLTSQEAMNPPAPVTQTVRPCPE 161
TV*PFSRRRLTSQEAMNPPAPVTQTVRPCPE
Sbjct: 339 TV*PFSRRRLTSQEAMNPPAPVTQTVRPCPE 247
Score = 214 bits (461), Expect = 4e-054
Identities = 91/139 (65%), Positives = 101/139 (72%)
Frame = -1 / -1
Query: 596 EVAPAGVVHRLXXXXXXXXXXXXXXGREHDALHSGXXXXXXXXXXAPDRWLDHHLRVIGD 417
++APA VV RL GREHDAL +G APD WLDHHLRVIGD
Sbjct: 682 KIAPASVVDRLVGFTVGVHVHCADGGREHDALDAGVCRRRHHILCAPDCWLDHHLRVIGD 503
Query: 416 RGGGVEDAVTAGEGLGKALWVQQVGAEEDETVDGAVKGPQVVVLWIHRVPDRAADCVALL 237
RGGGVEDAV AGEGL KA W+QQ+G +EDE + GAVKGPQVVVLWI RVPDRA DCV LL
Sbjct: 502 RGGGVEDAVAAGEGLDKAFWIQQIGTQEDEAIGGAVKGPQVVVLWIDRVPDRATDCVTLL 323
Query: 236 QEALDEPGGNEPSSSGHAN 180
+EALD+PGG+EPSSSG AN
Sbjct: 322 EEALDKPGGDEPSSSGDAN 266
Score = 85.4 bits (180), Expect(2) = 6e-022
Identities = 40/63 (63%), Positives = 41/63 (65%)
Frame = +1 / +3
Query: 181 FA*PELEGSLPPGSSSASWRRATQSAARSGTLWIQRTTT*GPLXXXXXXXXXXXXXCWTH 360
FA PELEGS PPG SSAS RR TQS ARSGTL IQRTTT*GPL CW
Sbjct: 267 FASPELEGSSPPGLSSASSRRVTQSVARSGTLSIQRTTT*GPLTAPPIASSSCVPICWIQ 446
Query: 361 RAL 369
+AL
Sbjct: 447 KAL 455
Score = 66.1 bits (138), Expect = 1e-009
Identities = 26/31 (83%), Positives = 26/31 (83%)
Frame = +2 / +1
Query: 197 WRVHCLLARQAPPGEGLHSPRHGQEPCGSKE 289
WRVH LLA QAPP EGLHSP HGQEPC SKE
Sbjct: 283 WRVHRLLACQAPPREGLHSPWHGQEPCRSKE 375
Score = 51.5 bits (106), Expect(2) = 2e-008
Identities = 18/23 (78%), Positives = 20/23 (86%)
Frame = -3 / -3
Query: 609 SCNTRGRSSRCRPQACWGHGRGS 541
SCNT+ RSS+CR QACW HGRGS
Sbjct: 695 SCNTQDRSSKCRRQACWVHGRGS 627
Score = 44.1 bits (90), Expect(2) = 6e-022
Identities = 19/24 (79%), Positives = 20/24 (83%)
Frame = +2 / +1
Query: 542 EPLP*PQQACGRHLLERPRVLQEH 613
EPLP* QQAC RHLLER VLQE+
Sbjct: 628 EPLP*TQQACRRHLLERS*VLQEY 699
Score = 32.2 bits (64), Expect(2) = 2e-008
Identities = 12/15 (80%), Positives = 13/15 (86%)
Frame = -3 / -3
Query: 288 SLDPQGS*PCRGLCS 244
SLD QGS*PC GLC+
Sbjct: 374 SLDRQGS*PCHGLCN 330
Score = 24.9 bits (48), Expect(2) = 8e-068
Identities = 6/6 (100%), Positives = 6/6 (100%)
Frame = -1 / -1
Query: 128 CCWHPS 111
CCWHPS
Sbjct: 217 CCWHPS 200
>gb|CW148381.1|CW148381 104_547_11141925_148_35008_095 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11141925, DNA
sequence
Length = 662
Score = 92.7 bits (196), Expect(4) = 2e-061
Identities = 37/62 (59%), Positives = 49/62 (79%)
Frame = +3 / +1
Query: 432 EMMIEPAIRGTRYVMAAADDAGVKRVVFTSSIGTVYMNPYRDPSKPVDDTCWSDLEYCKN 611
E +IEP I GTR V+ AA DAGV+R+V +S+IGT+YM+P RDP + D+ WSDLEYCK+
Sbjct: 19 EEIIEPIIVGTRNVVEAAADAGVRRLVLSSTIGTMYMDPRRDPDAALGDSSWSDLEYCKS 198
Query: 612 TQ 617
T+
Sbjct: 199 TK 204
Score = 88.6 bits (187), Expect(3) = 6e-038
Identities = 44/92 (47%), Positives = 47/92 (51%)
Frame = -2 / -2
Query: 883 RPCAWGASYTRTCASATSLTCTYACAAFT*VVADPVRYFITWSVLAFTVGCXXXXXXXXX 704
RP A GAS T TCASA SLTCT AC + T + PVRY VL F +GC
Sbjct: 577 RPPAPGASSTLTCASAASLTCT*ACDSLTYSLVCPVRYLRMCRVLVFMLGCSSSPSTTTG 398
Query: 703 XXXXXXXXXXXXXSHAPCSATVLA*QYQFWVF 608
SHAPCSA V A*QYQF F
Sbjct: 397 MTTARSSPRARAASHAPCSAIVFA*QYQFCEF 302
Score = 76.7 bits (161), Expect(4) = 2e-061
Identities = 31/47 (65%), Positives = 35/47 (74%)
Frame = +3 / +3
Query: 744 NASTDHVMKYLTGSATTYVNAAQAYVHVRDVAEAHVRVYEAPHAHGR 884
N ST H++KYLTG YVN + AYVHV+D AEAHVRV EAP A GR
Sbjct: 438 NTSTLHILKYLTGQTKEYVNESHAYVHVKDAAEAHVRVLEAPGAGGR 578
Score = 64.8 bits (135), Expect(4) = 2e-061
Identities = 22/28 (78%), Positives = 26/28 (92%)
Frame = +3 / +3
Query: 882 RYICAESTLHRGDLCRVLAKLFPEYPVP 965
RY+CAE TLHRG+LCR+LA LFPEYP+P
Sbjct: 579 RYVCAERTLHRGELCRILAGLFPEYPIP 662
Score = 62.9 bits (131), Expect(3) = 6e-038
Identities = 31/52 (59%), Positives = 36/52 (69%)
Frame = -2 / -1
Query: 613 VFLQYSRSLQQVSSTGLLGSR*GFMYTVPMEDVNTTRFTPASSAAAIT*RVP 458
V LQYSRSLQ S + GSR G MY VPM + +T R TPAS+AA+ T RVP
Sbjct: 200 VLLQYSRSLQLESPSAASGSRRGSMYMVPMVEDSTRRRTPASAAASTTFRVP 45
Score = 61.6 bits (128), Expect(4) = 2e-061
Identities = 21/25 (84%), Positives = 23/25 (92%)
Frame = +3 / +3
Query: 609 NTQNWYCYAKTVAEQGAWEVARKRG 683
N+QNWYCYAKT+AEQGAWE AR RG
Sbjct: 303 NSQNWYCYAKTIAEQGAWEAARARG 377
Score = 46.9 bits (96), Expect(3) = 6e-038
Identities = 20/25 (80%), Positives = 20/25 (80%)
Frame = -2 / -2
Query: 964 GTGYSGKSLARTRQRSPRCRVLSAQ 890
G GYSGKS AR RQ SPRCRV SAQ
Sbjct: 661 GIGYSGKSPARIRQSSPRCRVRSAQ 587
Score = 42.3 bits (86), Expect(3) = 4e-005
Identities = 18/24 (75%), Positives = 20/24 (83%)
Frame = -1 / -1
Query: 956 VLREELGEDAAEVAAVQGALGADV 885
VLREE GED AE+AAVQ AL AD+
Sbjct: 653 VLREESGEDTAELAAVQSALSADI 582
Score = 24.4 bits (47), Expect(3) = 4e-005
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = -1 / -1
Query: 866 RLVHPDVRLG 837
RL HPDVRLG
Sbjct: 560 RLEHPDVRLG 531
Score = 24.0 bits (46), Expect(3) = 4e-005
Identities = 8/10 (80%), Positives = 9/10 (90%)
Frame = -3 / -2
Query: 612 CSCNTRGRSS 583
CSC+ RGRSS
Sbjct: 199 CSCSIRGRSS 170
>gb|CF428989.1|CF428989 PH1_19_G12.b1_A002 Phosphorous-deficient seedlings Sorghum bicolor
cDNA clone PH1_19_G12_A002 3', mRNA sequence
Length = 514
Score = 111 bits (238), Expect(3) = 4e-060
Identities = 41/47 (87%), Positives = 44/47 (93%)
Frame = +3 / +3
Query: 918 DLCRVLAKLFPEYPVPTKCKDQVNPPVVGYKFTNQRLKDLGMDFVPV 1058
+LCR+L KLFPEYP+PTKCKD VNPPV GYKFTNQRLKDLGMDFVPV
Sbjct: 132 ELCRILXKLFPEYPIPTKCKDDVNPPVTGYKFTNQRLKDLGMDFVPV 272
Score = 101 bits (216), Expect(3) = 4e-060
Identities = 40/42 (95%), Positives = 42/42 (100%)
Frame = +3 / +2
Query: 792 TYVNAAQAYVHVRDVAEAHVRVYEAPHAHGRYICAESTLHRG 917
TYVNAAQAYVHV+DVAEAHVRVYEAP+AHGRYICAESTLHRG
Sbjct: 5 TYVNAAQAYVHVQDVAEAHVRVYEAPYAHGRYICAESTLHRG 130
Score = 88.6 bits (187), Expect(3) = 1e-050
Identities = 37/47 (78%), Positives = 37/47 (78%)
Frame = -2 / -1
Query: 1057 TGTKSIPRSLSLWLVNLYPTTGGLTWSLHLVGTGYSGKSLARTRQRS 917
TGTKSIPRSLS W VNLYP TGG T SLH VG GYSGKSL R RQ S
Sbjct: 271 TGTKSIPRSLSRWFVNLYPVTGGFTSSLHFVGMGYSGKSLXRMRQSS 131
Score = 88.1 bits (186), Expect(3) = 1e-050
Identities = 38/43 (88%), Positives = 39/43 (90%)
Frame = -2 / -2
Query: 916 PRCRVLSAQM*RPCAWGASYTRTCASATSLTCTYACAAFT*VV 788
PR RVLSAQM*RPCA GASYTRTCASATS TCTYACAAFT V+
Sbjct: 129 PRWRVLSAQM*RPCA*GASYTRTCASATSWTCTYACAAFTYVL 1
Score = 82.6 bits (174), Expect(2) = 3e-024
Identities = 36/46 (78%), Positives = 41/46 (89%)
Frame = -1 / -3
Query: 1055 RHEVHPQILEPLVGELVSYHRRVNLVLALGGYGVLREELGEDAAEV 918
RH+VHP+ILEPLV ELVS HRRV++VLAL GYGVL EEL EDAAE+
Sbjct: 269 RHKVHPKILEPLVRELVSCHRRVHVVLALCGYGVLWEELXEDAAEL 132
Score = 64.3 bits (134), Expect(3) = 1e-050
Identities = 24/27 (88%), Positives = 24/27 (88%)
Frame = -3 / -1
Query: 1140 WSWSCFVGSTGSMPFSWRLVTVS*RHC 1060
WSWS F GSTGSMPFSWRL TVS*RHC
Sbjct: 355 WSWSSFGGSTGSMPFSWRLFTVS*RHC 275
Score = 59.3 bits (123), Expect(3) = 4e-060
Identities = 24/28 (85%), Positives = 24/28 (85%)
Frame = +2 / +3
Query: 1058 LQCLYETVTSLQEKGMLPVLPTKQDHDQ 1141
LQCLYETV SLQEKGMLPVLP K D DQ
Sbjct: 273 LQCLYETVKSLQEKGMLPVLPPKDDQDQ 356
Score = 58.8 bits (122), Expect(2) = 5e-019
Identities = 25/35 (71%), Positives = 27/35 (77%)
Frame = +2 / +2
Query: 953 VPRTHQVQGPG*PSGGRIQVHQPEAQGSGDGLRAG 1057
VP TH+VQG PSG RIQVH+P AQGS DGL AG
Sbjct: 167 VPHTHKVQGRREPSGDRIQVHEPAAQGSWDGLCAG 271
Score = 57.9 bits (120), Expect(2) = 5e-019
Identities = 25/48 (52%), Positives = 31/48 (64%)
Frame = +1 / +2
Query: 1036 WGWTSCRSAVPLRDGHQPPGERHAARASDKTRP*PTRQIMIIFISSLT 1179
W +AVPLRD +PPGERHAARAS K RP PT ++I ++ T
Sbjct: 251 WDGLCAGAAVPLRDSEEPPGERHAARASAKRRPGPTTPQIMIISNADT 394
Score = 52.8 bits (109), Expect(3) = 6e-019
Identities = 25/42 (59%), Positives = 28/42 (66%)
Frame = -1 / -1
Query: 965 GYGVLREELGEDAAEVAAVQGALGADVAAVRVGRLVHPDVRL 840
G G + L AAV+GALGADVA +RVG LVHPDVRL
Sbjct: 178 GMGYSGKSLXRMRQSSAAVEGALGADVAPMRVGCLVHPDVRL 53
Score = 51.5 bits (106), Expect(2) = 3e-024
Identities = 25/38 (65%), Positives = 28/38 (73%)
Frame = -2 / -3
Query: 1141 LVMVLFCRKHGQHAFLLEAGDRLVEALQTGTKSIPRSL 1028
LV+V+F RKHGQHAFLLEA LVEALQ K P+ L
Sbjct: 356 LVLVVFWRKHGQHAFLLEALHCLVEALQHRHKVHPKIL 243
Score = 46.4 bits (95), Expect(3) = 6e-019
Identities = 21/28 (75%), Positives = 23/28 (82%)
Frame = -1 / -2
Query: 1142 VGHGLVLSEARAACLSPGGW*PSRRGTA 1059
VG G +L+EARAACLSPGG SRRGTA
Sbjct: 357 VGPGRLLAEARAACLSPGGSSLSRRGTA 274
Score = 38.6 bits (78), Expect(2) = 2e-006
Identities = 17/23 (73%), Positives = 17/23 (73%)
Frame = +1 / +1
Query: 988 TLRW*DTSSPTRGSRIWGWTSCR 1056
TLR DTSS T GSRI GWT CR
Sbjct: 202 TLR*QDTSSRTSGSRILGWTLCR 270
Score = 35.0 bits (70), Expect(2) = 2e-006
Identities = 13/40 (32%), Positives = 16/40 (40%)
Frame = +3 / +1
Query: 1035 LGMDFVPVCXXXXXXXXXXXXXXCCPCFRQNKTMTNSANH 1154
LG C CCPCFRQ T TN++ +
Sbjct: 250 LGWTLCRCCSASTRQ*RASRRKACCPCFRQKTTRTNNSTN 369
Score = 34.5 bits (69), Expect(3) = 6e-019
Identities = 14/20 (70%), Positives = 14/20 (70%)
Frame = -3 / -2
Query: 1020 GW*TCILPPEG*PGPCTWWV 961
G *TCIL PEG PCT WV
Sbjct: 234 GS*TCILSPEGSRRPCTLWV 175
>gb|CW181342.1|CW181342 104_596_11163456_116_36654_092 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11163456, DNA
sequence
Length = 583
Score = 202 bits (435), Expect = 1e-050
Identities = 89/128 (69%), Positives = 94/128 (73%)
Frame = -2 / -3
Query: 982 WSLHLVGTGYSGKSLARTRQRSPRCRVLSAQM*RPCAWGASYTRTCASATSLTCTYACAA 803
++ H VG GYSGKSLAR RQ SPR RVLSAQM*RPCA GASYTRTCASATS TCTYACAA
Sbjct: 509 YATHFVGMGYSGKSLARMRQSSPRWRVLSAQM*RPCA*GASYTRTCASATSWTCTYACAA 330
Query: 802 FT*VVADPVRYFITWSVLAFTVGCXXXXXXXXXXXXXXXXXXXXXXSHAPCSATVLA*QY 623
FT V+ADPVRYFITWSVLAFTVGC SHAPCSATVLA*QY
Sbjct: 329 FTYVLADPVRYFITWSVLAFTVGCSNGPSTSTGFTTIRSRPRFRATSHAPCSATVLA*QY 150
Query: 622 QFWVFLQY 599
QF + +Y
Sbjct: 149 QFCMHARY 126
Score = 182 bits (393), Expect(2) = 1e-057
Identities = 71/77 (92%), Positives = 76/77 (98%)
Frame = +3 / +1
Query: 744 NASTDHVMKYLTGSATTYVNAAQAYVHVRDVAEAHVRVYEAPHAHGRYICAESTLHRGDL 923
NASTDHVMKYLTGSA TYVNAAQAYVHV+DVAEAHVRVYEAP+AHGRYICAESTLHRG+L
Sbjct: 271 NASTDHVMKYLTGSAKTYVNAAQAYVHVQDVAEAHVRVYEAPYAHGRYICAESTLHRGEL 450
Query: 924 CRVLAKLFPEYPVPTKC 974
CR+LAKLFPEYP+PTKC
Sbjct: 451 CRILAKLFPEYPIPTKC 501
Score = 84.0 bits (177), Expect(2) = 4e-016
Identities = 38/53 (71%), Positives = 43/53 (81%)
Frame = -1 / -2
Query: 998 HRRVNLVLALGGYGVLREELGEDAAEVAAVQGALGADVAAVRVGRLVHPDVRL 840
+R + AL GYGVL EEL EDAAE+AAV+GALGADVA +RVG LVHPDVRL
Sbjct: 525 NRTTYICYALCGYGVLWEELSEDAAELAAVEGALGADVAPMRVGCLVHPDVRL 367
Score = 63.4 bits (132), Expect(2) = 1e-057
Identities = 23/23 (100%), Positives = 23/23 (100%)
Frame = +3 / +1
Query: 615 QNWYCYAKTVAEQGAWEVARKRG 683
QNWYCYAKTVAEQGAWEVARKRG
Sbjct: 142 QNWYCYAKTVAEQGAWEVARKRG 210
Score = 45.1 bits (92), Expect(2) = 9e-005
Identities = 16/18 (88%), Positives = 17/18 (94%)
Frame = +2 / +3
Query: 749 QHGPRDEVPDGVGHDLRE 802
QHGPRDEVPDGVG D+RE
Sbjct: 276 QHGPRDEVPDGVGQDVRE 329
Score = 23.1 bits (44), Expect(2) = 9e-005
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = +2 / +3
Query: 611 HPELVLLRQD 640
H ELVLLRQD
Sbjct: 138 HAELVLLRQD 167
Score = 22.6 bits (43), Expect(2) = 4e-016
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = -1 / -2
Query: 770 LHHVVRAG 747
LHHVVRAG
Sbjct: 297 LHHVVRAG 274
>gb|CW185694.1|CW185694 104_603_11166185_148_36702_073 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11166185, DNA
sequence
Length = 566
Score = 202 bits (435), Expect = 1e-050
Identities = 89/128 (69%), Positives = 94/128 (73%)
Frame = -2 / +1
Query: 982 WSLHLVGTGYSGKSLARTRQRSPRCRVLSAQM*RPCAWGASYTRTCASATSLTCTYACAA 803
++ H VG GYSGKSLAR RQ SPR RVLSAQM*RPCA GASYTRTCASATS TCTYACAA
Sbjct: 28 YATHFVGMGYSGKSLARMRQSSPRWRVLSAQM*RPCA*GASYTRTCASATSWTCTYACAA 207
Query: 802 FT*VVADPVRYFITWSVLAFTVGCXXXXXXXXXXXXXXXXXXXXXXSHAPCSATVLA*QY 623
FT V+ADPVRYFITWSVLAFTVGC SHAPCSATVLA*QY
Sbjct: 208 FTYVLADPVRYFITWSVLAFTVGCSNGPSTSTGFTTIRSRPRFRATSHAPCSATVLA*QY 387
Query: 622 QFWVFLQY 599
QF + +Y
Sbjct: 388 QFCMHARY 411
Score = 182 bits (393), Expect(2) = 1e-057
Identities = 71/77 (92%), Positives = 76/77 (98%)
Frame = +3 / -1
Query: 744 NASTDHVMKYLTGSATTYVNAAQAYVHVRDVAEAHVRVYEAPHAHGRYICAESTLHRGDL 923
NASTDHVMKYLTGSA TYVNAAQAYVHV+DVAEAHVRVYEAP+AHGRYICAESTLHRG+L
Sbjct: 266 NASTDHVMKYLTGSAKTYVNAAQAYVHVQDVAEAHVRVYEAPYAHGRYICAESTLHRGEL 87
Query: 924 CRVLAKLFPEYPVPTKC 974
CR+LAKLFPEYP+PTKC
Sbjct: 86 CRILAKLFPEYPIPTKC 36
Score = 84.0 bits (177), Expect(2) = 4e-016
Identities = 38/53 (71%), Positives = 43/53 (81%)
Frame = -1 / +3
Query: 998 HRRVNLVLALGGYGVLREELGEDAAEVAAVQGALGADVAAVRVGRLVHPDVRL 840
+R + AL GYGVL EEL EDAAE+AAV+GALGADVA +RVG LVHPDVRL
Sbjct: 12 NRTTYICYALCGYGVLWEELSEDAAELAAVEGALGADVAPMRVGCLVHPDVRL 170
Score = 63.4 bits (132), Expect(2) = 1e-057
Identities = 23/23 (100%), Positives = 23/23 (100%)
Frame = +3 / -1
Query: 615 QNWYCYAKTVAEQGAWEVARKRG 683
QNWYCYAKTVAEQGAWEVARKRG
Sbjct: 395 QNWYCYAKTVAEQGAWEVARKRG 327
Score = 45.1 bits (92), Expect(2) = 9e-005
Identities = 16/18 (88%), Positives = 17/18 (94%)
Frame = +2 / -3
Query: 749 QHGPRDEVPDGVGHDLRE 802
QHGPRDEVPDGVG D+RE
Sbjct: 261 QHGPRDEVPDGVGQDVRE 208
Score = 23.1 bits (44), Expect(2) = 9e-005
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = +2 / -3
Query: 611 HPELVLLRQD 640
H ELVLLRQD
Sbjct: 399 HAELVLLRQD 370
Score = 22.6 bits (43), Expect(2) = 4e-016
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = -1 / +3
Query: 770 LHHVVRAG 747
LHHVVRAG
Sbjct: 240 LHHVVRAG 263
>gb|CD210709.1|CD210709 HS1_49_C07.b1_A012 Heat-shocked seedlings Sorghum bicolor cDNA clone
HS1_49_C07_A012 3', mRNA sequence
Length = 670
Score = 125 bits (267), Expect(4) = 2e-057
Identities = 46/59 (77%), Positives = 52/59 (88%)
Frame = +3 / +3
Query: 882 RYICAESTLHRGDLCRVLAKLFPEYPVPTKCKDQVNPPVVGYKFTNQRLKDLGMDFVPV 1058
RY+CAE TLHRG+LCR+LA LFPEYP+PT+CKDQVNPP GYKFTNQ LKDLG+ F PV
Sbjct: 270 RYVCAERTLHRGELCRILAGLFPEYPIPTRCKDQVNPPKKGYKFTNQPLKDLGIKFTPV 446
Score = 88.1 bits (186), Expect(2) = 4e-036
Identities = 43/89 (48%), Positives = 46/89 (51%)
Frame = -2 / -1
Query: 883 RPCAWGASYTRTCASATSLTCTYACAAFT*VVADPVRYFITWSVLAFTVGCXXXXXXXXX 704
RP A GAS T TCASA SLTCT AC + T + PVRY VL F +GC
Sbjct: 268 RPPAPGASSTLTCASAASLTCT*ACDSLTYSLVCPVRYLRMCRVLVFMLGCSSSPSTTTG 89
Query: 703 XXXXXXXXXXXXXSHAPCSATVLA*QYQF 617
SHAPCSA V A*QYQF
Sbjct: 88 MTTARSSLRARAASHAPCSAIVFA*QYQF 2
Score = 85.8 bits (181), Expect(2) = 4e-036
Identities = 39/56 (69%), Positives = 39/56 (69%)
Frame = -2 / -1
Query: 1057 TGTKSIPRSLSLWLVNLYPTTGGLTWSLHLVGTGYSGKSLARTRQRSPRCRVLSAQ 890
TG IPRS W VNL P GG T SLHLVG GYSGKS AR RQ SPRCRV SAQ
Sbjct: 445 TGVNLIPRSFRGWFVNL*PFFGGFT*SLHLVGIGYSGKSPARIRQSSPRCRVRSAQ 278
Score = 76.7 bits (161), Expect(4) = 2e-057
Identities = 31/47 (65%), Positives = 35/47 (74%)
Frame = +3 / +3
Query: 744 NASTDHVMKYLTGSATTYVNAAQAYVHVRDVAEAHVRVYEAPHAHGR 884
N ST H++KYLTG YVN + AYVHV+D AEAHVRV EAP A GR
Sbjct: 129 NTSTLHILKYLTGQTKEYVNESHAYVHVKDAAEAHVRVLEAPGAGGR 269
Score = 53.3 bits (110), Expect(4) = 2e-057
Identities = 18/21 (85%), Positives = 19/21 (90%)
Frame = +3 / +3
Query: 618 NWYCYAKTVAEQGAWEVARKR 680
NWYCYAKT+AEQGAWE AR R
Sbjct: 3 NWYCYAKTIAEQGAWEAARAR 65
Score = 51.0 bits (105), Expect(2) = 1e-007
Identities = 26/50 (52%), Positives = 35/50 (70%)
Frame = -1 / -3
Query: 1034 ILEPLVGELVSYHRRVNLVLALGGYGVLREELGEDAAEVAAVQGALGADV 885
+L+ LV +LV+ ++L+LA VLREE GED AE+AAVQ AL AD+
Sbjct: 422 VLQRLVCKLVTLLWWIHLILAPCRNRVLREESGEDTAELAAVQSALSADI 273
Score = 27.2 bits (53), Expect(2) = 1e-007
Identities = 10/11 (90%), Positives = 10/11 (90%)
Frame = -1 / -3
Query: 869 GRLVHPDVRLG 837
GRL HPDVRLG
Sbjct: 254 GRLEHPDVRLG 222
Score = 26.7 bits (52), Expect(4) = 2e-057
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = +2 / +3
Query: 1067 LYETVTSLQEKGML 1108
LYE V SLQEKG L
Sbjct: 456 LYEAVKSLQEKGFL 497
>gb|CW287590.1|CW287590 104_765_11411495_116_35521_084 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11411495, DNA
sequence
Length = 690
Score = 105 bits (225), Expect(4) = 3e-056
Identities = 41/51 (80%), Positives = 45/51 (88%)
Frame = -1 / -2
Query: 431 RVIGDRGGGVEDAVTAGEGLGKALWVQQVGAEEDETVDGAVKGPQVVVLWI 279
RVIGDRGGGVEDAV AGEGL KA W+QQ+G +EDE + GAVKGPQVVVLWI
Sbjct: 479 RVIGDRGGGVEDAVAAGEGLDKAFWIQQIGTQEDEAIGGAVKGPQVVVLWI 327
Score = 94.5 bits (200), Expect(3) = 3e-056
Identities = 38/38 (100%), Positives = 38/38 (100%)
Frame = +3 / +3
Query: 162 SGQGRTVCVTGAGGFIASWLVKRLLEKGYTVRGTVRNP 275
SGQGRTVCVTGAGGFIASWLVKRLLEKGYTVRGTVRNP
Sbjct: 51 SGQGRTVCVTGAGGFIASWLVKRLLEKGYTVRGTVRNP 164
Score = 93.6 bits (198), Expect(4) = 3e-056
Identities = 38/38 (100%), Positives = 38/38 (100%)
Frame = -2 / -3
Query: 274 GFLTVPRTV*PFSRRRLTSQEAMNPPAPVTQTVRPCPE 161
GFLTVPRTV*PFSRRRLTSQEAMNPPAPVTQTVRPCPE
Sbjct: 163 GFLTVPRTV*PFSRRRLTSQEAMNPPAPVTQTVRPCPE 50
Score = 89.0 bits (188), Expect(3) = 3e-056
Identities = 36/52 (69%), Positives = 37/52 (71%)
Frame = +3 / +3
Query: 276 VDPKNDHLRALDGXXXXXXXXXXXXXXPQSLAEAFSGCDGVFHAASPVTDDP 431
VDPKNDHLRALDG P+SL EAFSGCDGVFHAASPVTDDP
Sbjct: 324 VDPKNDHLRALDGAADRLVLLRADLLDPESLVEAFSGCDGVFHAASPVTDDP 479
Score = 81.7 bits (172), Expect(3) = 3e-056
Identities = 34/39 (87%), Positives = 36/39 (92%)
Frame = +3 / +2
Query: 432 EMMIEPAIRGTRYVMAAADDAGVKRVVFTSSIGTVYMNP 548
EMMIEP+IRGT+YVM AA D GVKRVVFTSSIGTVYMNP
Sbjct: 572 EMMIEPSIRGTQYVMTAAADTGVKRVVFTSSIGTVYMNP 688
Score = 66.6 bits (139), Expect(3) = 2e-026
Identities = 26/32 (81%), Positives = 29/32 (90%)
Frame = -1 / -2
Query: 275 RVPDRAADCVALLQEALDEPGGNEPSSSGHAN 180
RVPDRA DCV LL+EALD+PGG+EPSSSG AN
Sbjct: 164 RVPDRATDCVTLLEEALDKPGGDEPSSSGDAN 69
Score = 64.8 bits (135), Expect(3) = 2e-026
Identities = 28/49 (57%), Positives = 28/49 (57%)
Frame = -2 / -3
Query: 421 VTGEAAWKTPSQPEKASARLCGXXXXXXXXXXXXXXXXXXXRWSFFGST 275
VTGEAAWKTPSQPEKAS RL G RWSFFGST
Sbjct: 469 VTGEAAWKTPSQPEKASTRLSGSSRSARRRTRRSAAPSRALRWSFFGST 323
Score = 60.2 bits (125), Expect(4) = 3e-056
Identities = 26/32 (81%), Positives = 27/32 (84%)
Frame = -2 / -1
Query: 550 *GFMYTVPMEDVNTTRFTPASSAAAIT*RVPR 455
*GFMYTVPMEDVNTTR TP S+AA IT VPR
Sbjct: 690 *GFMYTVPMEDVNTTRLTPVSAAAVITYCVPR 595
Score = 57.0 bits (118), Expect(2) = 4e-010
Identities = 26/32 (81%), Positives = 26/32 (81%)
Frame = +1 / +1
Query: 181 FA*PELEGSLPPGSSSASWRRATQSAARSGTL 276
FA PELEGS PPG SSAS RR TQS ARSGTL
Sbjct: 70 FASPELEGSSPPGLSSASSRRVTQSVARSGTL 165
Score = 56.5 bits (117), Expect = 1e-006
Identities = 22/26 (84%), Positives = 22/26 (84%)
Frame = +2 / +2
Query: 197 WRVHCLLARQAPPGEGLHSPRHGQEP 274
WRVH LLA QAPP EGLHSP HGQEP
Sbjct: 86 WRVHRLLACQAPPREGLHSPWHGQEP 163
Score = 33.1 bits (66), Expect(3) = 2e-026
Identities = 15/29 (51%), Positives = 16/29 (55%)
Frame = -1 / -3
Query: 518 REHDALHSGXXXXXXXXXXAPDRWLDHHL 432
REHDAL +G APD LDHHL
Sbjct: 658 REHDALDAGVCRRRHHILCAPDAGLDHHL 572
Score = 32.7 bits (65), Expect(2) = 4e-010
Identities = 14/30 (46%), Positives = 15/30 (50%)
Frame = +1 / +1
Query: 280 IQRTTT*GPLXXXXXXXXXXXXXCWTHRAL 369
IQRTTT*GPL CW +AL
Sbjct: 328 IQRTTT*GPLTAPPIASSSCVPICWIQKAL 417
Score = 24.9 bits (48), Expect(4) = 3e-056
Identities = 6/6 (100%), Positives = 6/6 (100%)
Frame = -1 / -2
Query: 128 CCWHPS 111
CCWHPS
Sbjct: 20 CCWHPS 3
>gb|CW287591.1|CW287591 104_765_11411495_148_35525_084 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11411495, DNA
sequence
Length = 614
Score = 143 bits (306), Expect(2) = 2e-053
Identities = 56/62 (90%), Positives = 59/62 (95%)
Frame = +3 / -2
Query: 432 EMMIEPAIRGTRYVMAAADDAGVKRVVFTSSIGTVYMNPYRDPSKPVDDTCWSDLEYCKN 611
EMMIEPAIRGT+YVM AA D GVKRVVFTSSIGTVYMNPYR+P+KPVDDTCWSDLEYCKN
Sbjct: 256 EMMIEPAIRGTQYVMTAAADTGVKRVVFTSSIGTVYMNPYREPNKPVDDTCWSDLEYCKN 77
Query: 612 TQ 617
TQ
Sbjct: 76 TQ 71
Score = 105 bits (225), Expect(2) = 3e-047
Identities = 41/51 (80%), Positives = 45/51 (88%)
Frame = -1 / +1
Query: 431 RVIGDRGGGVEDAVTAGEGLGKALWVQQVGAEEDETVDGAVKGPQVVVLWI 279
RVIGDRGGGVEDAV AGEGL KA W+QQ+G +EDE + GAVKGPQVVVLWI
Sbjct: 349 RVIGDRGGGVEDAVAAGEGLDKAFWIQQIGTQEDEAIGGAVKGPQVVVLWI 501
Score = 105 bits (224), Expect(2) = 3e-047
Identities = 47/53 (88%), Positives = 48/53 (90%)
Frame = -2 / +3
Query: 613 VFLQYSRSLQQVSSTGLLGSR*GFMYTVPMEDVNTTRFTPASSAAAIT*RVPR 455
VFLQYSRSLQQVSSTGLLGSR*GFMYTVPMEDVNTTR TP S+AA IT VPR
Sbjct: 75 VFLQYSRSLQQVSSTGLLGSR*GFMYTVPMEDVNTTRLTPVSAAAVITYCVPR 233
Score = 89.0 bits (188), Expect(2) = 2e-053
Identities = 36/52 (69%), Positives = 37/52 (71%)
Frame = +3 / -3
Query: 276 VDPKNDHLRALDGXXXXXXXXXXXXXXPQSLAEAFSGCDGVFHAASPVTDDP 431
VDPKNDHLRALDG P+SL EAFSGCDGVFHAASPVTDDP
Sbjct: 504 VDPKNDHLRALDGAADRLVLLRADLLDPESLVEAFSGCDGVFHAASPVTDDP 349
Score = 64.8 bits (135), Expect(2) = 1e-018
Identities = 28/49 (57%), Positives = 28/49 (57%)
Frame = -2 / +2
Query: 421 VTGEAAWKTPSQPEKASARLCGXXXXXXXXXXXXXXXXXXXRWSFFGST 275
VTGEAAWKTPSQPEKAS RL G RWSFFGST
Sbjct: 359 VTGEAAWKTPSQPEKASTRLSGSSRSARRRTRRSAAPSRALRWSFFGST 505
Score = 52.8 bits (109), Expect = 1e-005
Identities = 19/23 (82%), Positives = 20/23 (86%)
Frame = -3 / +1
Query: 609 SCNTRGRSSRCRPQACWGHGRGS 541
SCNT+ RSSRCR QACW HGRGS
Sbjct: 79 SCNTQDRSSRCRRQACWVHGRGS 147
Score = 50.6 bits (104), Expect(2) = 1e-018
Identities = 25/55 (45%), Positives = 28/55 (50%)
Frame = -1 / +2
Query: 596 EVAPAGVVHRLXXXXXXXXXXXXXXGREHDALHSGXXXXXXXXXXAPDRWLDHHL 432
++APAGVV RL GREHDAL +G APD WLDHHL
Sbjct: 92 KIAPAGVVDRLVGFTVGVHVHCADGGREHDALDAGVCRRRHHILCAPDCWLDHHL 256
Score = 44.1 bits (90), Expect(2) = 2e-006
Identities = 19/24 (79%), Positives = 20/24 (83%)
Frame = +2 / -1
Query: 542 EPLP*PQQACGRHLLERPRVLQEH 613
EPLP* QQAC RHLLER VLQE+
Sbjct: 146 EPLP*TQQACRRHLLERS*VLQEY 75
Score = 32.7 bits (65), Expect(2) = 2e-006
Identities = 14/30 (46%), Positives = 15/30 (50%)
Frame = +1 / -1
Query: 280 IQRTTT*GPLXXXXXXXXXXXXXCWTHRAL 369
IQRTTT*GPL CW +AL
Sbjct: 500 IQRTTT*GPLTAPPIASSSCVPICWIQKAL 411
>gb|CW148380.1|CW148380 104_547_11141925_116_35012_095 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11141925, DNA
sequence
Length = 677
Score = 88.6 bits (187), Expect(3) = 1e-032
Identities = 44/92 (47%), Positives = 47/92 (51%)
Frame = -2 / +2
Query: 883 RPCAWGASYTRTCASATSLTCTYACAAFT*VVADPVRYFITWSVLAFTVGCXXXXXXXXX 704
RP A GAS T TCASA SLTCT AC + T + PVRY VL F +GC
Sbjct: 197 RPPAPGASSTLTCASAASLTCT*ACDSLTYSLVCPVRYLRMCRVLVFMLGCSSSPSTTTG 376
Query: 703 XXXXXXXXXXXXXSHAPCSATVLA*QYQFWVF 608
SHAPCSA V A*QYQF F
Sbjct: 377 MTTARSSPRARAASHAPCSAIVFA*QYQFCEF 472
Score = 76.7 bits (161), Expect(4) = 9e-053
Identities = 31/47 (65%), Positives = 35/47 (74%)
Frame = +3 / -3
Query: 744 NASTDHVMKYLTGSATTYVNAAQAYVHVRDVAEAHVRVYEAPHAHGR 884
N ST H++KYLTG YVN + AYVHV+D AEAHVRV EAP A GR
Sbjct: 336 NTSTLHILKYLTGQTKEYVNESHAYVHVKDAAEAHVRVLEAPGAGGR 196
Score = 68.4 bits (143), Expect(4) = 9e-053
Identities = 25/40 (62%), Positives = 32/40 (80%)
Frame = +3 / -3
Query: 882 RYICAESTLHRGDLCRVLAKLFPEYPVPTKCKDQVNPPVV 1001
RY+CAE TLHRG+LCR+LA LFPEYP+PT+ + P V+
Sbjct: 195 RYVCAERTLHRGELCRILAGLFPEYPIPTRYGNSWLPGVL 76
Score = 61.6 bits (128), Expect(4) = 9e-053
Identities = 21/25 (84%), Positives = 23/25 (92%)
Frame = +3 / -3
Query: 609 NTQNWYCYAKTVAEQGAWEVARKRG 683
N+QNWYCYAKT+AEQGAWE AR RG
Sbjct: 471 NSQNWYCYAKTIAEQGAWEAARARG 397
Score = 59.7 bits (124), Expect(4) = 9e-053
Identities = 21/36 (58%), Positives = 29/36 (80%)
Frame = +3 / -1
Query: 510 VFTSSIGTVYMNPYRDPSKPVDDTCWSDLEYCKNTQ 617
V +S+IGT+YM+P RDP + D+ WSDLEYCK+T+
Sbjct: 677 VLSSTIGTMYMDPRRDPDAALGDSSWSDLEYCKSTK 570
Score = 51.5 bits (106), Expect(3) = 1e-032
Identities = 22/28 (78%), Positives = 23/28 (82%)
Frame = -2 / +2
Query: 973 HLVGTGYSGKSLARTRQRSPRCRVLSAQ 890
+LVG GYSGKS AR RQ SPRCRV SAQ
Sbjct: 104 YLVGIGYSGKSPARIRQSSPRCRVRSAQ 187
Score = 42.3 bits (86), Expect(3) = 4e-005
Identities = 18/24 (75%), Positives = 20/24 (83%)
Frame = -1 / +1
Query: 956 VLREELGEDAAEVAAVQGALGADV 885
VLREE GED AE+AAVQ AL AD+
Sbjct: 121 VLREESGEDTAELAAVQSALSADI 192
Score = 40.0 bits (81), Expect(3) = 1e-032
Identities = 19/30 (63%), Positives = 20/30 (66%)
Frame = -2 / +1
Query: 613 VFLQYSRSLQQVSSTGLLGSR*GFMYTVPM 524
V LQYSRSLQ S + GSR G MY VPM
Sbjct: 574 VLLQYSRSLQLESPSAASGSRRGSMYMVPM 663
Score = 24.4 bits (47), Expect(3) = 4e-005
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = -1 / +1
Query: 866 RLVHPDVRLG 837
RL HPDVRLG
Sbjct: 214 RLEHPDVRLG 243
Score = 24.0 bits (46), Expect(3) = 4e-005
Identities = 8/10 (80%), Positives = 9/10 (90%)
Frame = -3 / +2
Query: 612 CSCNTRGRSS 583
CSC+ RGRSS
Sbjct: 575 CSCSIRGRSS 604
>gb|CW346174.1|CW346174 104_849_11488883_148_36218_040 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11488883, DNA
sequence
Length = 735
Score = 102 bits (218), Expect(2) = 3e-031
Identities = 49/94 (52%), Positives = 51/94 (54%)
Frame = -2 / -3
Query: 898 SAQM*RPCAWGASYTRTCASATSLTCTYACAAFT*VVADPVRYFITWSVLAFTVGCXXXX 719
SAQM RP A GAS TRTCASA S TCTYAC A V+A+P RY T LAFT GC
Sbjct: 595 SAQMYRPAACGASKTRTCASAASRTCTYACTALAYVLAEPFRYLSTCIRLAFTDGCSAGP 416
Query: 718 XXXXXXXXXXXXXXXXXXSHAPCSATVLA*QYQF 617
SHA CSAT *QYQF
Sbjct: 415 CTSTGFTTTRSTPRAAASSHAACSATAFP*QYQF 314
Score = 101 bits (216), Expect(4) = 1e-050
Identities = 40/55 (72%), Positives = 45/55 (81%)
Frame = +3 / +3
Query: 744 NASTDHVMKYLTGSATTYVNAAQAYVHVRDVAEAHVRVYEAPHAHGRYICAESTL 908
NAS HV+KYL GSA TY NA QAYVHVRD A+AHVRV+EAPHA GRYICA+ +
Sbjct: 441 NASLMHVLKYLNGSAKTYANAVQAYVHVRDAADAHVRVFEAPHAAGRYICADGAV 605
Score = 71.2 bits (149), Expect(4) = 1e-050
Identities = 28/52 (53%), Positives = 37/52 (71%)
Frame = +3 / +3
Query: 477 AAADDAGVKRVVFTSSIGTVYMNPYRDPSKPVDDTCWSDLEYCKNTQNWYCY 632
AAA+ V+RVV TSSIG V M+P R P VD++CWSDL++CK T+ Y +
Sbjct: 87 AAAEAGTVRRVVLTSSIGAVAMDPNRSPDAVVDESCWSDLDFCKKTKVQYSH 242
Score = 55.1 bits (114), Expect(2) = 3e-031
Identities = 28/46 (60%), Positives = 31/46 (67%)
Frame = -2 / -3
Query: 613 VFLQYSRSLQQVSSTGLLGSR*GFMYTVPMEDVNTTRFTPASSAAA 476
VFLQ SRSLQ SST G R G M T PM++V TTR T +SAAA
Sbjct: 223 VFLQKSRSLQHDSSTTASGERLGSMATAPMDEVRTTRRTVPASAAA 86
Score = 48.3 bits (99), Expect(4) = 1e-050
Identities = 17/23 (73%), Positives = 17/23 (73%)
Frame = +3 / +3
Query: 615 QNWYCYAKTVAEQGAWEVARKRG 683
QNWYCY K VAEQ AWE A RG
Sbjct: 312 QNWYCYGKAVAEQAAWEEAAARG 380
Score = 39.1 bits (79), Expect(2) = 0.005
Identities = 16/31 (51%), Positives = 22/31 (70%)
Frame = +3 / +3
Query: 432 EMMIEPAIRGTRYVMAAADDAGVKRVVFTSS 524
E M+EPA+ GTRY++ AA +AG R V +S
Sbjct: 39 EEMVEPAVTGTRYIIDAAAEAGTVRRVVLTS 131
Score = 37.7 bits (76), Expect(4) = 1e-050
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = +3 / +3
Query: 900 STLHRGDLCRVLAKLFPEYPVPTK 971
+ LHR D+ R L K FP+YPVP +
Sbjct: 600 AVLHREDVVRTLRKFFPDYPVPER 671
Score = 30.9 bits (61), Expect(3) = 0.17
Identities = 15/28 (53%), Positives = 18/28 (64%)
Frame = -1 / -2
Query: 920 VAAVQGALGADVAAVRVGRLVHPDVRLG 837
+A GA+GADV A V RL DVR+G
Sbjct: 617 LAVEHGAVGADVPAGGVRRLEDADVRVG 534
Score = 25.4 bits (49), Expect(3) = 0.17
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = -2 / -3
Query: 511 TTRFTPASSAAAIT*RVP 458
T R PAS+AA++ *RVP
Sbjct: 118 TRRTVPASAAASMM*RVP 65
Score = 23.1 bits (44), Expect(2) = 0.005
Identities = 9/12 (75%), Positives = 11/12 (91%)
Frame = +2 / +2
Query: 575 RHLLERPRVLQE 610
R +LERPR+LQE
Sbjct: 185 RVVLERPRLLQE 220
Score = 21.7 bits (41), Expect(3) = 0.17
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = -3 / -1
Query: 609 SCNTRGRSSRCR 574
SC +RGRSS R
Sbjct: 219 SCRSRGRSSTTR 184
>gb|CN129192.1|CN129192 RHOH1_34_B10.b3_A002 Acid- and alkaline-treated roots Sorghum bicolor
cDNA clone RHOH1_34_B10_A002 3', mRNA sequence
Length = 795
Score = 179 bits (385), Expect(2) = 8e-048
Identities = 70/105 (66%), Positives = 86/105 (81%)
Frame = +3 / +2
Query: 744 NASTDHVMKYLTGSATTYVNAAQAYVHVRDVAEAHVRVYEAPHAHGRYICAESTLHRGDL 923
NAS HV+KYL GSA T+ NA QAYV VRDVA+AH+RV+E+P A GRY+CAE LHR D+
Sbjct: 50 NASIAHVLKYLDGSARTFANAVQAYVDVRDVADAHLRVFESPAASGRYLCAERVLHREDV 229
Query: 924 CRVLAKLFPEYPVPTKCKDQVNPPVVGYKFTNQRLKDLGMDFVPV 1058
R+LAKLFPEYPVPT+C D+VNP YKF+NQ+L+DLG++F PV
Sbjct: 230 VRILAKLFPEYPVPTRCSDEVNPRKQPYKFSNQKLRDLGLEFRPV 364
Score = 138 bits (296), Expect(2) = 2e-032
Identities = 67/109 (61%), Positives = 70/109 (64%)
Frame = -2 / -1
Query: 1057 TGTKSIPRSLSLWLVNLYPTTGGLTWSLHLVGTGYSGKSLARTRQRSPRCRVLSAQM*RP 878
TG S PRS S W NLY G T S HLVGTGYSGKSLAR R S R R SAQ RP
Sbjct: 363 TGRNSNPRSRSFWFENLYGCFRGFTSSEHLVGTGYSGKSLARMRTTSSRWRTRSAQRYRP 184
Query: 877 CAWGASYTRTCASATSLTCTYACAAFT*VVADPVRYFITWSVLAFTVGC 731
A G S TR CASATS T TYAC A V A+P RY T ++LAFTVGC
Sbjct: 183 DAAGLSKTRRCASATSRTSTYACTALAKVRAEPSRYLSTCAMLAFTVGC 37
Score = 78.0 bits (164), Expect = 3e-013
Identities = 42/75 (56%), Positives = 51/75 (68%)
Frame = -1 / -3
Query: 1061 ADRHEVHPQILEPLVGELVSYHRRVNLVLALGGYGVLREELGEDAAEVAAVQGALGADVA 882
A R E+ Q+ E LV ELV RV+LV A GG GVL EELGEDA +V AV+ ALGA+V+
Sbjct: 367 AHRPELQSQVPELLVRELVRLLPRVHLVGAPGGDGVLGEELGEDADDVLAVEDALGAEVS 188
Query: 881 AVRVGRLVHPDVRLG 837
A R G L +VR+G
Sbjct: 187 AGRGGALEDAEVRVG 143
Score = 40.5 bits (82), Expect = 0.066
Identities = 18/35 (51%), Positives = 22/35 (62%)
Frame = +2 / +1
Query: 953 VPRTHQVQGPG*PSGGRIQVHQPEAQGSGDGLRAG 1057
VPR HQV G P+ +QV +PEA G G G+ AG
Sbjct: 259 VPRPHQVLRRGEPAEAAVQVLEPEAPGPGIGVPAG 363
Score = 34.1 bits (68), Expect(2) = 8e-048
Identities = 14/19 (73%), Positives = 16/19 (84%)
Frame = +2 / +2
Query: 1061 QCLYETVTSLQEKGMLPVL 1117
Q LY+TV +LQEKG LPVL
Sbjct: 368 QSLYDTVKNLQEKGHLPVL 424
Score = 23.1 bits (44), Expect(2) = 2e-032
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = -3 / -1
Query: 1116 STGSMPFSWRLVTVS* 1069
STG PFS R TVS*
Sbjct: 423 STGRWPFS*RFFTVS* 376
>gb|BE362142.1|BE362142 DG1_84_C11.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 698
Score = 179 bits (385), Expect(2) = 8e-048
Identities = 70/105 (66%), Positives = 86/105 (81%)
Frame = +3 / +1
Query: 744 NASTDHVMKYLTGSATTYVNAAQAYVHVRDVAEAHVRVYEAPHAHGRYICAESTLHRGDL 923
NAS HV+KYL GSA T+ NA QAYV VRDVA+AH+RV+E+P A GRY+CAE LHR D+
Sbjct: 67 NASIAHVLKYLDGSARTFANAVQAYVDVRDVADAHLRVFESPAASGRYLCAERVLHREDV 246
Query: 924 CRVLAKLFPEYPVPTKCKDQVNPPVVGYKFTNQRLKDLGMDFVPV 1058
R+LAKLFPEYPVPT+C D+VNP YKF+NQ+L+DLG++F PV
Sbjct: 247 VRILAKLFPEYPVPTRCSDEVNPRKQPYKFSNQKLRDLGLEFRPV 381
Score = 138 bits (296), Expect(2) = 2e-032
Identities = 67/109 (61%), Positives = 70/109 (64%)
Frame = -2 / -1
Query: 1057 TGTKSIPRSLSLWLVNLYPTTGGLTWSLHLVGTGYSGKSLARTRQRSPRCRVLSAQM*RP 878
TG S PRS S W NLY G T S HLVGTGYSGKSLAR R S R R SAQ RP
Sbjct: 380 TGRNSNPRSRSFWFENLYGCFRGFTSSEHLVGTGYSGKSLARMRTTSSRWRTRSAQRYRP 201
Query: 877 CAWGASYTRTCASATSLTCTYACAAFT*VVADPVRYFITWSVLAFTVGC 731
A G S TR CASATS T TYAC A V A+P RY T ++LAFTVGC
Sbjct: 200 DAAGLSKTRRCASATSRTSTYACTALAKVRAEPSRYLSTCAMLAFTVGC 54
Score = 78.0 bits (164), Expect = 3e-013
Identities = 42/75 (56%), Positives = 51/75 (68%)
Frame = -1 / -3
Query: 1061 ADRHEVHPQILEPLVGELVSYHRRVNLVLALGGYGVLREELGEDAAEVAAVQGALGADVA 882
A R E+ Q+ E LV ELV RV+LV A GG GVL EELGEDA +V AV+ ALGA+V+
Sbjct: 384 AHRPELQSQVPELLVRELVRLLPRVHLVGAPGGDGVLGEELGEDADDVLAVEDALGAEVS 205
Query: 881 AVRVGRLVHPDVRLG 837
A R G L +VR+G
Sbjct: 204 AGRGGALEDAEVRVG 160
Score = 40.5 bits (82), Expect = 0.066
Identities = 18/35 (51%), Positives = 22/35 (62%)
Frame = +2 / +3
Query: 953 VPRTHQVQGPG*PSGGRIQVHQPEAQGSGDGLRAG 1057
VPR HQV G P+ +QV +PEA G G G+ AG
Sbjct: 276 VPRPHQVLRRGEPAEAAVQVLEPEAPGPGIGVPAG 380
Score = 34.1 bits (68), Expect(2) = 8e-048
Identities = 14/19 (73%), Positives = 16/19 (84%)
Frame = +2 / +1
Query: 1061 QCLYETVTSLQEKGMLPVL 1117
Q LY+TV +LQEKG LPVL
Sbjct: 385 QSLYDTVKNLQEKGHLPVL 441
Score = 23.1 bits (44), Expect(2) = 2e-032
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = -3 / -1
Query: 1116 STGSMPFSWRLVTVS* 1069
STG PFS R TVS*
Sbjct: 440 STGRWPFS*RFFTVS* 393
>gb|BE362152.1|BE362152 DG1_84_D11.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 678
Score = 179 bits (385), Expect(2) = 8e-048
Identities = 70/105 (66%), Positives = 86/105 (81%)
Frame = +3 / +1
Query: 744 NASTDHVMKYLTGSATTYVNAAQAYVHVRDVAEAHVRVYEAPHAHGRYICAESTLHRGDL 923
NAS HV+KYL GSA T+ NA QAYV VRDVA+AH+RV+E+P A GRY+CAE LHR D+
Sbjct: 46 NASIAHVLKYLDGSARTFANAVQAYVDVRDVADAHLRVFESPAASGRYLCAERVLHREDV 225
Query: 924 CRVLAKLFPEYPVPTKCKDQVNPPVVGYKFTNQRLKDLGMDFVPV 1058
R+LAKLFPEYPVPT+C D+VNP YKF+NQ+L+DLG++F PV
Sbjct: 226 VRILAKLFPEYPVPTRCSDEVNPRKQPYKFSNQKLRDLGLEFRPV 360
Score = 138 bits (296), Expect(2) = 2e-032
Identities = 67/109 (61%), Positives = 70/109 (64%)
Frame = -2 / -2
Query: 1057 TGTKSIPRSLSLWLVNLYPTTGGLTWSLHLVGTGYSGKSLARTRQRSPRCRVLSAQM*RP 878
TG S PRS S W NLY G T S HLVGTGYSGKSLAR R S R R SAQ RP
Sbjct: 359 TGRNSNPRSRSFWFENLYGCFRGFTSSEHLVGTGYSGKSLARMRTTSSRWRTRSAQRYRP 180
Query: 877 CAWGASYTRTCASATSLTCTYACAAFT*VVADPVRYFITWSVLAFTVGC 731
A G S TR CASATS T TYAC A V A+P RY T ++LAFTVGC
Sbjct: 179 DAAGLSKTRRCASATSRTSTYACTALAKVRAEPSRYLSTCAMLAFTVGC 33
Score = 78.0 bits (164), Expect = 3e-013
Identities = 42/75 (56%), Positives = 51/75 (68%)
Frame = -1 / -1
Query: 1061 ADRHEVHPQILEPLVGELVSYHRRVNLVLALGGYGVLREELGEDAAEVAAVQGALGADVA 882
A R E+ Q+ E LV ELV RV+LV A GG GVL EELGEDA +V AV+ ALGA+V+
Sbjct: 363 AHRPELQSQVPELLVRELVRLLPRVHLVGAPGGDGVLGEELGEDADDVLAVEDALGAEVS 184
Query: 881 AVRVGRLVHPDVRLG 837
A R G L +VR+G
Sbjct: 183 AGRGGALEDAEVRVG 139
Score = 40.5 bits (82), Expect = 0.066
Identities = 18/35 (51%), Positives = 22/35 (62%)
Frame = +2 / +3
Query: 953 VPRTHQVQGPG*PSGGRIQVHQPEAQGSGDGLRAG 1057
VPR HQV G P+ +QV +PEA G G G+ AG
Sbjct: 255 VPRPHQVLRRGEPAEAAVQVLEPEAPGPGIGVPAG 359
Score = 34.1 bits (68), Expect(2) = 8e-048
Identities = 14/19 (73%), Positives = 16/19 (84%)
Frame = +2 / +1
Query: 1061 QCLYETVTSLQEKGMLPVL 1117
Q LY+TV +LQEKG LPVL
Sbjct: 364 QSLYDTVKNLQEKGHLPVL 420
Score = 23.1 bits (44), Expect(2) = 2e-032
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = -3 / -2
Query: 1116 STGSMPFSWRLVTVS* 1069
STG PFS R TVS*
Sbjct: 419 STGRWPFS*RFFTVS* 372
>gb|BE360923.1|BE360923 DG1_67_G03.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 642
Score = 179 bits (385), Expect(2) = 8e-048
Identities = 70/105 (66%), Positives = 86/105 (81%)
Frame = +3 / +1
Query: 744 NASTDHVMKYLTGSATTYVNAAQAYVHVRDVAEAHVRVYEAPHAHGRYICAESTLHRGDL 923
NAS HV+KYL GSA T+ NA QAYV VRDVA+AH+RV+E+P A GRY+CAE LHR D+
Sbjct: 13 NASIAHVLKYLDGSARTFANAVQAYVDVRDVADAHLRVFESPAASGRYLCAERVLHREDV 192
Query: 924 CRVLAKLFPEYPVPTKCKDQVNPPVVGYKFTNQRLKDLGMDFVPV 1058
R+LAKLFPEYPVPT+C D+VNP YKF+NQ+L+DLG++F PV
Sbjct: 193 VRILAKLFPEYPVPTRCSDEVNPRKQPYKFSNQKLRDLGLEFRPV 327
Score = 134 bits (287), Expect(2) = 4e-031
Identities = 66/108 (61%), Positives = 69/108 (63%)
Frame = -2 / -2
Query: 1057 TGTKSIPRSLSLWLVNLYPTTGGLTWSLHLVGTGYSGKSLARTRQRSPRCRVLSAQM*RP 878
TG S PRS S W NLY G T S HLVGTGYSGKSLAR R S R R SAQ RP
Sbjct: 326 TGRNSNPRSRSFWFENLYGCFRGFTSSEHLVGTGYSGKSLARMRTTSSRWRTRSAQRYRP 147
Query: 877 CAWGASYTRTCASATSLTCTYACAAFT*VVADPVRYFITWSVLAFTVG 734
A G S TR CASATS T TYAC A V A+P RY T ++LAFTVG
Sbjct: 146 DAAGLSKTRRCASATSRTSTYACTALAKVRAEPSRYLSTCAMLAFTVG 3
Score = 78.0 bits (164), Expect = 3e-013
Identities = 42/75 (56%), Positives = 51/75 (68%)
Frame = -1 / -1
Query: 1061 ADRHEVHPQILEPLVGELVSYHRRVNLVLALGGYGVLREELGEDAAEVAAVQGALGADVA 882
A R E+ Q+ E LV ELV RV+LV A GG GVL EELGEDA +V AV+ ALGA+V+
Sbjct: 330 AHRPELQSQVPELLVRELVRLLPRVHLVGAPGGDGVLGEELGEDADDVLAVEDALGAEVS 151
Query: 881 AVRVGRLVHPDVRLG 837
A R G L +VR+G
Sbjct: 150 AGRGGALEDAEVRVG 106
Score = 40.5 bits (82), Expect = 0.066
Identities = 18/35 (51%), Positives = 22/35 (62%)
Frame = +2 / +3
Query: 953 VPRTHQVQGPG*PSGGRIQVHQPEAQGSGDGLRAG 1057
VPR HQV G P+ +QV +PEA G G G+ AG
Sbjct: 222 VPRPHQVLRRGEPAEAAVQVLEPEAPGPGIGVPAG 326
Score = 34.1 bits (68), Expect(2) = 8e-048
Identities = 14/19 (73%), Positives = 16/19 (84%)
Frame = +2 / +1
Query: 1061 QCLYETVTSLQEKGMLPVL 1117
Q LY+TV +LQEKG LPVL
Sbjct: 331 QSLYDTVKNLQEKGHLPVL 387
Score = 23.1 bits (44), Expect(2) = 4e-031
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = -3 / -2
Query: 1116 STGSMPFSWRLVTVS* 1069
STG PFS R TVS*
Sbjct: 386 STGRWPFS*RFFTVS* 339
>gb|CN138460.1|CN138460 OX1_64_A03.b1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_64_A03_A002 3', mRNA sequence
Length = 747
Score = 177 bits (382), Expect(2) = 2e-047
Identities = 70/105 (66%), Positives = 85/105 (80%)
Frame = +3 / +3
Query: 744 NASTDHVMKYLTGSATTYVNAAQAYVHVRDVAEAHVRVYEAPHAHGRYICAESTLHRGDL 923
NAS HV+KYL GSA T+ NA QAYV VRDVA+AH+RV+E+P A GRY+CAE LHR D+
Sbjct: 93 NASIAHVLKYLDGSARTFANAVQAYVDVRDVADAHLRVFESPAASGRYLCAERVLHREDV 272
Query: 924 CRVLAKLFPEYPVPTKCKDQVNPPVVGYKFTNQRLKDLGMDFVPV 1058
R LAKLFPEYPVPT+C D+VNP YKF+NQ+L+DLG++F PV
Sbjct: 273 VRTLAKLFPEYPVPTRCSDEVNPRKQPYKFSNQKLRDLGLEFRPV 407
Score = 138 bits (297), Expect(2) = 2e-032
Identities = 67/109 (61%), Positives = 70/109 (64%)
Frame = -2 / -3
Query: 1057 TGTKSIPRSLSLWLVNLYPTTGGLTWSLHLVGTGYSGKSLARTRQRSPRCRVLSAQM*RP 878
TG S PRS S W NLY G T S HLVGTGYSGKSLAR R S R R SAQ RP
Sbjct: 406 TGRNSNPRSRSFWFENLYGCFRGFTSSEHLVGTGYSGKSLARVRTTSSRWRTRSAQRYRP 227
Query: 877 CAWGASYTRTCASATSLTCTYACAAFT*VVADPVRYFITWSVLAFTVGC 731
A G S TR CASATS T TYAC A V A+P RY T ++LAFTVGC
Sbjct: 226 DAAGLSKTRRCASATSRTSTYACTALAKVRAEPSRYLSTCAMLAFTVGC 80
Score = 74.8 bits (157), Expect = 3e-012
Identities = 41/75 (54%), Positives = 50/75 (66%)
Frame = -1 / -2
Query: 1061 ADRHEVHPQILEPLVGELVSYHRRVNLVLALGGYGVLREELGEDAAEVAAVQGALGADVA 882
A R E+ Q+ E LV ELV RV+LV A GG GVL EELGE A +V AV+ ALGA+V+
Sbjct: 410 AHRPELQSQVPELLVRELVRLLPRVHLVGAPGGDGVLGEELGEGADDVLAVEDALGAEVS 231
Query: 881 AVRVGRLVHPDVRLG 837
A R G L +VR+G
Sbjct: 230 AGRGGALEDAEVRVG 186
Score = 40.5 bits (82), Expect = 0.066
Identities = 18/35 (51%), Positives = 22/35 (62%)
Frame = +2 / +2
Query: 953 VPRTHQVQGPG*PSGGRIQVHQPEAQGSGDGLRAG 1057
VPR HQV G P+ +QV +PEA G G G+ AG
Sbjct: 302 VPRPHQVLRRGEPAEAAVQVLEPEAPGPGIGVPAG 406
Score = 34.1 bits (68), Expect(2) = 2e-047
Identities = 14/19 (73%), Positives = 16/19 (84%)
Frame = +2 / +3
Query: 1061 QCLYETVTSLQEKGMLPVL 1117
Q LY+TV +LQEKG LPVL
Sbjct: 411 QSLYDTVKNLQEKGHLPVL 467
Score = 23.1 bits (44), Expect(2) = 2e-032
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = -3 / -3
Query: 1116 STGSMPFSWRLVTVS* 1069
STG PFS R TVS*
Sbjct: 466 STGRWPFS*RFFTVS* 419
>gb|CX607016.1|CX607016 ANR1_6_E09.b1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_6_E09_A002 3', mRNA sequence
Length = 667
Score = 176 bits (379), Expect(2) = 5e-047
Identities = 70/105 (66%), Positives = 84/105 (80%)
Frame = +3 / +2
Query: 744 NASTDHVMKYLTGSATTYVNAAQAYVHVRDVAEAHVRVYEAPHAHGRYICAESTLHRGDL 923
NAS HV+KYL GSA T+ NA QAYV VRDVA+AH RV E+P A GRY+CAE LHR D+
Sbjct: 14 NASIAHVLKYLDGSARTFANAVQAYVDVRDVADAHFRVLESPAASGRYLCAERVLHREDV 193
Query: 924 CRVLAKLFPEYPVPTKCKDQVNPPVVGYKFTNQRLKDLGMDFVPV 1058
R+LAKLFPEYPVPT+C D+VNP YKF+NQ+L+DLG++F PV
Sbjct: 194 VRILAKLFPEYPVPTRCSDEVNPRKQPYKFSNQKLRDLGLEFRPV 328
Score = 138 bits (296), Expect(2) = 2e-032
Identities = 67/109 (61%), Positives = 70/109 (64%)
Frame = -2 / -2
Query: 1057 TGTKSIPRSLSLWLVNLYPTTGGLTWSLHLVGTGYSGKSLARTRQRSPRCRVLSAQM*RP 878
TG S PRS S W NLY G T S HLVGTGYSGKSLAR R S R R SAQ RP
Sbjct: 327 TGRNSNPRSRSFWFENLYGCFRGFTSSEHLVGTGYSGKSLARMRTTSSRWRTRSAQRYRP 148
Query: 877 CAWGASYTRTCASATSLTCTYACAAFT*VVADPVRYFITWSVLAFTVGC 731
A G S TR CASATS T TYAC A V A+P RY T ++LAFTVGC
Sbjct: 147 DAAGLSKTRKCASATSRTSTYACTALAKVRAEPSRYLSTCAMLAFTVGC 1
Score = 73.9 bits (155), Expect = 6e-012
Identities = 41/75 (54%), Positives = 49/75 (65%)
Frame = -1 / -1
Query: 1061 ADRHEVHPQILEPLVGELVSYHRRVNLVLALGGYGVLREELGEDAAEVAAVQGALGADVA 882
A R E+ Q+ E LV ELV RV+LV GG GVL EELGEDA +V AV+ ALGA V+
Sbjct: 331 AHRPELQSQVPELLVRELVRLLPRVHLVGTPGGDGVLGEELGEDADDVLAVEDALGAKVS 152
Query: 881 AVRVGRLVHPDVRLG 837
A R G L +VR+G
Sbjct: 151 AGRGGAL*DAEVRVG 107
Score = 40.0 bits (81), Expect = 0.091
Identities = 18/35 (51%), Positives = 22/35 (62%)
Frame = +2 / +1
Query: 953 VPRTHQVQGPG*PSGGRIQVHQPEAQGSGDGLRAG 1057
VPR HQV G P+ +QV +PEA G G G+ AG
Sbjct: 223 VPRPHQVFRRGEPAEAAVQVLEPEAPGPGIGVPAG 327
Score = 34.1 bits (68), Expect(2) = 5e-047
Identities = 14/19 (73%), Positives = 16/19 (84%)
Frame = +2 / +2
Query: 1061 QCLYETVTSLQEKGMLPVL 1117
Q LY+TV +LQEKG LPVL
Sbjct: 332 QSLYDTVKNLQEKGHLPVL 388
Score = 23.1 bits (44), Expect(2) = 2e-032
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = -3 / -2
Query: 1116 STGSMPFSWRLVTVS* 1069
STG PFS R TVS*
Sbjct: 387 STGRWPFS*RFFTVS* 340
>gb|CW436323.1|CW436323 fsbb001f152o03f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f152o03, DNA
sequence
Length = 588
Score = 95.0 bits (201), Expect(3) = 5e-045
Identities = 37/52 (71%), Positives = 43/52 (82%)
Frame = +3 / -3
Query: 816 YVHVRDVAEAHVRVYEAPHAHGRYICAESTLHRGDLCRVLAKLFPEYPVPTK 971
YVHV+ VAEAH RV E+P AH RYICAESTL R ++CR LAKLFPE P+PT+
Sbjct: 586 YVHVQAVAEAHARVCESPSAHARYICAESTLPRAEVCRTLAKLFPECPIPTQ 431
Score = 83.1 bits (175), Expect(3) = 8e-040
Identities = 37/51 (72%), Positives = 40/51 (78%)
Frame = -2 / +3
Query: 967 VGTGYSGKSLARTRQRSPRCRVLSAQM*RPCAWGASYTRTCASATSLTCTY 815
VG G+SGKSLAR RQ S R RVLSA M*R CA G S+TR CASAT+ TCTY
Sbjct: 435 VGMGHSGKSLARVRQTSARGRVLSAHM*RACAEGDSHTRACASATAWTCTY 587
Score = 72.5 bits (152), Expect(3) = 5e-045
Identities = 27/30 (90%), Positives = 28/30 (93%)
Frame = +3 / -2
Query: 969 KCKDQVNPPVVGYKFTNQRLKDLGMDFVPV 1058
+CKD VNPPV GYKFTNQRLKDLGMDFVPV
Sbjct: 305 RCKDDVNPPVTGYKFTNQRLKDLGMDFVPV 216
Score = 64.3 bits (134), Expect(3) = 8e-040
Identities = 24/27 (88%), Positives = 24/27 (88%)
Frame = -3 / +1
Query: 1140 WSWSCFVGSTGSMPFSWRLVTVS*RHC 1060
WSWS F GSTGSMPFSWRL TVS*RHC
Sbjct: 133 WSWSSFGGSTGSMPFSWRLFTVS*RHC 213
Score = 62.0 bits (129), Expect(3) = 8e-040
Identities = 25/30 (83%), Positives = 25/30 (83%)
Frame = -2 / +1
Query: 1057 TGTKSIPRSLSLWLVNLYPTTGGLTWSLHL 968
TGTKSIPRSLS W VNLYP TGG T SLHL
Sbjct: 217 TGTKSIPRSLSRWFVNLYPVTGGFTSSLHL 306
Score = 59.3 bits (123), Expect(3) = 5e-045
Identities = 24/28 (85%), Positives = 24/28 (85%)
Frame = +2 / -2
Query: 1058 LQCLYETVTSLQEKGMLPVLPTKQDHDQ 1141
LQCLYETV SLQEKGMLPVLP K D DQ
Sbjct: 215 LQCLYETVKSLQEKGMLPVLPPKDDQDQ 132
Score = 57.9 bits (120), Expect(2) = 2e-016
Identities = 25/48 (52%), Positives = 31/48 (64%)
Frame = +1 / -1
Query: 1036 WGWTSCRSAVPLRDGHQPPGERHAARASDKTRP*PTRQIMIIFISSLT 1179
W +AVPLRD +PPGERHAARAS K RP PT ++I ++ T
Sbjct: 237 WDGLCAGAAVPLRDSEEPPGERHAARASAKRRPGPTTPQIMIISNADT 94
Score = 53.8 bits (111), Expect(3) = 5e-023
Identities = 22/28 (78%), Positives = 26/28 (92%)
Frame = -1 / +3
Query: 1055 RHEVHPQILEPLVGELVSYHRRVNLVLA 972
RH+VHP+ILEPLV ELVS HRRV++VLA
Sbjct: 219 RHKVHPKILEPLVRELVSCHRRVHVVLA 302
Score = 51.5 bits (106), Expect(3) = 5e-023
Identities = 25/38 (65%), Positives = 28/38 (73%)
Frame = -2 / +3
Query: 1141 LVMVLFCRKHGQHAFLLEAGDRLVEALQTGTKSIPRSL 1028
LV+V+F RKHGQHAFLLEA LVEALQ K P+ L
Sbjct: 132 LVLVVFWRKHGQHAFLLEALHCLVEALQHRHKVHPKIL 245
Score = 49.6 bits (102), Expect(2) = 2e-016
Identities = 22/30 (73%), Positives = 23/30 (76%)
Frame = +2 / -1
Query: 968 QVQGPG*PSGGRIQVHQPEAQGSGDGLRAG 1057
QVQG PSG RIQVH+P AQGS DGL AG
Sbjct: 306 QVQGRREPSGDRIQVHEPAAQGSWDGLCAG 217
Score = 46.4 bits (95), Expect(2) = 9e-007
Identities = 21/28 (75%), Positives = 23/28 (82%)
Frame = -1 / +2
Query: 1142 VGHGLVLSEARAACLSPGGW*PSRRGTA 1059
VG G +L+EARAACLSPGG SRRGTA
Sbjct: 131 VGPGRLLAEARAACLSPGGSSLSRRGTA 214
Score = 42.3 bits (86), Expect(3) = 5e-023
Identities = 23/53 (43%), Positives = 31/53 (58%)
Frame = -1 / +2
Query: 998 HRRVNLVLALGGYGVLREELGEDAAEVAAVQGALGADVAAVRVGRLVHPDVRL 840
+R + +L G G L E+L E AA++ A +GAL VA +R G L H VRL
Sbjct: 404 NRTTYICYSLCGDGALWEKLSEGAADLGAGEGALCTYVARMRGG*LTHAGVRL 562
Score = 38.6 bits (78), Expect(2) = 2e-006
Identities = 17/23 (73%), Positives = 17/23 (73%)
Frame = +1 / -3
Query: 988 TLRW*DTSSPTRGSRIWGWTSCR 1056
TLR DTSS T GSRI GWT CR
Sbjct: 286 TLR*QDTSSRTSGSRILGWTLCR 218
Score = 35.0 bits (70), Expect(2) = 2e-006
Identities = 13/40 (32%), Positives = 16/40 (40%)
Frame = +3 / -3
Query: 1035 LGMDFVPVCXXXXXXXXXXXXXXCCPCFRQNKTMTNSANH 1154
LG C CCPCFRQ T TN++ +
Sbjct: 238 LGWTLCRCCSASTRQ*RASRRKACCPCFRQKTTRTNNSTN 119
Score = 28.6 bits (56), Expect(2) = 9e-007
Identities = 12/17 (70%), Positives = 12/17 (70%)
Frame = -3 / +2
Query: 1020 GW*TCILPPEG*PGPCT 970
G *TCIL PEG PCT
Sbjct: 254 GS*TCILSPEGSRRPCT 304
>gb|CX607102.1|CX607102 ANR1_6_E09.g1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_6_E09_A002 5', mRNA sequence
Length = 742
Score = 164 bits (353), Expect(2) = 3e-044
Identities = 69/120 (57%), Positives = 80/120 (66%)
Frame = +3 / +2
Query: 165 GQGRTVCVTGAGGFIASWLVKRLLEKGYTVRGTVRNPVDPKNDHLRALDGXXXXXXXXXX 344
G G+TVCVTGA G+IASWLVK LLEKGYTV+GTV NP DPKN HL+ LDG
Sbjct: 188 GNGQTVCVTGAAGYIASWLVKMLLEKGYTVKGTVWNPDDPKNAHLKGLDGAAERLILCKA 367
Query: 345 XXXXPQSLAEAFSGCDGVFHAASPVTDDPEMMIEPAIRGTRYVMAAADDAGVKRVVFTSS 524
++ A GC GVF SPVTDDPE M+EPA+RGT YV+ AA +AG R V +S
Sbjct: 368 DLLDYDAICRAVQGCQGVFRTGSPVTDDPEQMVEPAVRGTEYVINAAAEAGTVRRVVFTS 547
Score = 114 bits (244), Expect(2) = 4e-026
Identities = 44/71 (61%), Positives = 53/71 (74%)
Frame = +3 / +2
Query: 471 VMAAADDAGVKRVVFTSSIGTVYMNPYRDPSKPVDDTCWSDLEYCKNTQNWYCYAKTVAE 650
+ AAA+ V+RVVFTSSIG V M+P R P VD++CWSDL +CK T+NWYCY K VAE
Sbjct: 497 INAAAEAGTVRRVVFTSSIGAVTMDPSRGPDVVVDESCWSDL*FCKKTRNWYCYGKAVAE 676
Query: 651 QGAWEVARKRG 683
Q AW+ AR RG
Sbjct: 677 QAAWDAARHRG 709
Score = 83.5 bits (176), Expect(2) = 7e-034
Identities = 40/91 (43%), Positives = 56/91 (61%)
Frame = -1 / -1
Query: 452 RWLDHHLRVIGDRGGGVEDAVTAGEGLGKALWVQQVGAEEDETVDGAVKGPQVVVLWIHR 273
R L H LR++GD G G EDA+ A G + VQ+VG ED+ + AV+ +V VL +
Sbjct: 475 RRLHHLLRIVGDGGAGAEDALAALHGAADGVVVQEVGLAEDQPLGRAVQPLEVRVLRVIW 296
Query: 272 VPDRAADCVALLQEALDEPGGNEPSSSGHAN 180
VPD A D V+LL++ L EP G+ P +G A+
Sbjct: 295 VPDGALDSVSLLEQHLHEPRGDVPGRAGDAH 203
Score = 83.1 bits (175), Expect(2) = 7e-034
Identities = 41/63 (65%), Positives = 44/63 (69%)
Frame = -2 / -2
Query: 661 HAPCSATVLA*QYQFWVFLQYSRSLQQVSSTGLLGSR*GFMYTVPMEDVNTTRFTPASSA 482
HA CSAT L *QYQF VFLQ RSLQ SST G R G M T P+EDVNTTR T +SA
Sbjct: 687 HAACSATALP*QYQFLVFLQN*RSLQHDSSTTTSGPRLGSMVTAPIEDVNTTRRTVPASA 508
Query: 481 AAI 473
AA+
Sbjct: 507 AAL 499
Score = 62.5 bits (130), Expect(3) = 2e-017
Identities = 28/43 (65%), Positives = 30/43 (69%)
Frame = -2 / -2
Query: 292 SFFGSTGFLTVPRTV*PFSRRRLTSQEAMNPPAPVTQTVRPCP 164
+FFGS+GF TVP TV PFS TS EAM P APVT TV P P
Sbjct: 315 AFFGSSGFQTVPLTVYPFSSSIFTSHEAMYPAAPVTHTVCPFP 187
Score = 42.8 bits (87), Expect(3) = 2e-017
Identities = 22/43 (51%), Positives = 23/43 (53%)
Frame = -2 / -2
Query: 511 TTRFTPASSAAAIT*RVPRXXXXXXXXXXSVTGEAAWKTPSQP 383
T R PAS+AA IT VPR SVTGE KTP QP
Sbjct: 534 TRRTVPASAAALITYSVPRTAGSTICSGSSVTGEPVRKTPWQP 406
Score = 36.8 bits (74), Expect(2) = 3e-044
Identities = 18/31 (58%), Positives = 22/31 (70%)
Frame = +2 / +1
Query: 545 PLP*PQQACGRHLLERPRVLQEHPELVLLRQ 637
P P ++ R +LERP VLQE+ ELVLLRQ
Sbjct: 571 PQPRARRRGRRVVLERPLVLQENQELVLLRQ 663
Score = 29.0 bits (57), Expect(2) = 4e-026
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +2 / +1
Query: 200 RVHCLLARQAPPGEGLHSPRHGQEP 274
RVH L+AR+ EG+H H EP
Sbjct: 223 RVHRLVAREDAAREGIHCQGHRLEP 297
Score = 23.5 bits (45), Expect(3) = 2e-017
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = -3 / -3
Query: 609 SCNTRGRSSRCR 574
SC TRGRSS R
Sbjct: 635 SCRTRGRSSTTR 600
>gb|CN125662.1|CN125662 RHOH1_12_B03.g1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_12_B03_A002 5', mRNA sequence
Length = 688
Score = 100 bits (212), Expect(3) = 2e-043
Identities = 37/90 (41%), Positives = 58/90 (64%)
Frame = +3 / +3
Query: 414 PVTDDPEMMIEPAIRGTRYVMAAADDAGVKRVVFTSSIGTVYMNPYRDPSKPVDDTCWSD 593
P+ D ++ PA+ GT V+ A+ +A VK VV SS+ V +NP + +D+ CWSD
Sbjct: 327 PIGDPEVELLAPAVTGTMNVLKASSEAKVKGVVVVSSVAAVMVNPGWPQDEVMDEACWSD 506
Query: 594 LEYCKNTQNWYCYAKTVAEQGAWEVARKRG 683
+E+C+ QNWYC +KT+AE A++ A++ G
Sbjct: 507 VEFCRTNQNWYCLSKTLAETEAFDYAKRTG 596
Score = 67.0 bits (140), Expect(3) = 2e-043
Identities = 29/58 (50%), Positives = 33/58 (56%)
Frame = +3 / +3
Query: 246 YTVRGTVRNPVDPKNDHLRALDGXXXXXXXXXXXXXXPQSLAEAFSGCDGVFHAASPV 419
Y V GTVR+P D KN HL A+DG S+A A +GCDGVFH ASPV
Sbjct: 141 YVVHGTVRDPGDAKNAHLAAMDGAAARLRLFRADLLDYGSVAAAVAGCDGVFHVASPV 314
Score = 55.6 bits (115), Expect(2) = 3e-012
Identities = 30/59 (50%), Positives = 35/59 (59%)
Frame = -1 / -3
Query: 422 GDRGGGVEDAVTAGEGLGKALWVQQVGAEEDETVDGAVKGPQVVVLWIHRVPDRAADCV 246
GD G VEDAV AG+G A VQQVG E+ + GAV QV VL + R+ D A D V
Sbjct: 317 GDWGRDVEDAVAAGDGRRHAAVVQQVGPEQAQPGRGAVHRRQVRVLGVARITDGAMDHV 141
Score = 49.6 bits (102), Expect(3) = 2e-043
Identities = 19/25 (76%), Positives = 21/25 (84%)
Frame = +3 / +3
Query: 171 GRTVCVTGAGGFIASWLVKRLLEKG 245
G VCVTGAGGF+ASWLV+RLL G
Sbjct: 63 GTAVCVTGAGGFVASWLVERLLAGG 137
Score = 38.2 bits (77), Expect(2) = 3e-012
Identities = 16/25 (64%), Positives = 17/25 (68%)
Frame = -2 / -1
Query: 244 PFSRRRLTSQEAMNPPAPVTQTVRP 170
P +RRR TS EA PPAPVT T P
Sbjct: 136 PPARRRSTSHEATKPPAPVTHTAVP 62
Score = 35.4 bits (71), Expect(2) = 9e-005
Identities = 13/19 (68%), Positives = 15/19 (78%)
Frame = -2 / -1
Query: 418 TGEAAWKTPSQPEKASARL 362
TG+A WKTPSQP A+A L
Sbjct: 313 TGDATWKTPSQPATAAATL 257
Score = 32.7 bits (65), Expect(2) = 9e-005
Identities = 12/19 (63%), Positives = 16/19 (84%)
Frame = -1 / -3
Query: 236 QEALDEPGGNEPSSSGHAN 180
+EALDEP G+E S +GHA+
Sbjct: 128 EEALDEPRGHEASRAGHAH 72
>gb|CW480229.1|CW480229 fsbb001f239d02f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f239d02, DNA
sequence
Length = 573
Score = 102 bits (218), Expect(2) = 6e-024
Identities = 49/94 (52%), Positives = 51/94 (54%)
Frame = -2 / -3
Query: 898 SAQM*RPCAWGASYTRTCASATSLTCTYACAAFT*VVADPVRYFITWSVLAFTVGCXXXX 719
SAQM RP A GAS TRTCASA S TCTYAC A V+A+P RY T LAFT GC
Sbjct: 451 SAQMYRPAACGASKTRTCASAASRTCTYACTALAYVLAEPFRYLSTCIRLAFTDGCSAGP 272
Query: 718 XXXXXXXXXXXXXXXXXXSHAPCSATVLA*QYQF 617
SHA CSAT *QYQF
Sbjct: 271 CTSTGFTTTRSTPRAAASSHAACSATAFP*QYQF 170
Score = 101 bits (216), Expect(4) = 2e-043
Identities = 40/55 (72%), Positives = 45/55 (81%)
Frame = +3 / +3
Query: 744 NASTDHVMKYLTGSATTYVNAAQAYVHVRDVAEAHVRVYEAPHAHGRYICAESTL 908
NAS HV+KYL GSA TY NA QAYVHVRD A+AHVRV+EAPHA GRYICA+ +
Sbjct: 297 NASLMHVLKYLNGSAKTYANAVQAYVHVRDAADAHVRVFEAPHAAGRYICADGAV 461
Score = 48.3 bits (99), Expect(4) = 2e-043
Identities = 17/23 (73%), Positives = 17/23 (73%)
Frame = +3 / +3
Query: 615 QNWYCYAKTVAEQGAWEVARKRG 683
QNWYCY K VAEQ AWE A RG
Sbjct: 168 QNWYCYGKAVAEQAAWEEAAARG 236
Score = 46.4 bits (95), Expect(4) = 2e-043
Identities = 15/31 (48%), Positives = 22/31 (70%)
Frame = +3 / +3
Query: 540 MNPYRDPSKPVDDTCWSDLEYCKNTQNWYCY 632
M+P R P VD++CWSDL++CK T+ Y +
Sbjct: 6 MDPNRSPDAVVDESCWSDLDFCKKTKVQYSH 98
Score = 37.7 bits (76), Expect(4) = 2e-043
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = +3 / +3
Query: 900 STLHRGDLCRVLAKLFPEYPVPTK 971
+ LHR D+ R L K FP+YPVP +
Sbjct: 456 AVLHREDVVRTLRKFFPDYPVPER 527
Score = 30.4 bits (60), Expect(2) = 6e-024
Identities = 16/25 (64%), Positives = 16/25 (64%)
Frame = -2 / -3
Query: 613 VFLQYSRSLQQVSSTGLLGSR*GFM 539
VFLQ SRSLQ SST G R G M
Sbjct: 79 VFLQKSRSLQHDSSTTASGERLGSM 5
>gb|CN132335.1|CN132335 OX1_5_C03.g1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_5_C03_A002 5', mRNA sequence
Length = 626
Score = 110 bits (235), Expect(2) = 9e-043
Identities = 45/80 (56%), Positives = 52/80 (65%)
Frame = +3 / +1
Query: 180 VCVTGAGGFIASWLVKRLLEKGYTVRGTVRNPVDPKNDHLRALDGXXXXXXXXXXXXXXP 359
VCVTG GG++ASWLVK LL +GY V TVR+P DPKN HLR LDG
Sbjct: 61 VCVTGGGGYVASWLVKLLLSRGYAVHATVRDPSDPKNAHLRRLDGAPESLLLFKADVLDR 240
Query: 360 QSLAEAFSGCDGVFHAASPV 419
+LA A +GC+GVFH ASPV
Sbjct: 241 DALAAAVAGCEGVFHVASPV 300
Score = 85.8 bits (181), Expect(2) = 9e-043
Identities = 35/92 (38%), Positives = 50/92 (54%)
Frame = +3 / +3
Query: 408 ASPVTDDPEMMIEPAIRGTRYVMAAADDAGVKRVVFTSSIGTVYMNPYRDPSKPVDDTCW 587
A V D ++ PA++GT V+ A V++VV SS V+ NP + D++CW
Sbjct: 303 ADKVLDPESEVLSPAVKGTLNVLQACSANNVQKVVVVSSTAAVHYNPSWPHGRIKDESCW 482
Query: 588 SDLEYCKNTQNWYCYAKTVAEQGAWEVARKRG 683
SD +C +NWY AKT+AE+ A E K G
Sbjct: 483 SDKNFCMKNENWYTAAKTIAEETALEYGEKNG 578
Score = 70.7 bits (148), Expect(2) = 8e-016
Identities = 34/80 (42%), Positives = 49/80 (61%)
Frame = -1 / -3
Query: 419 DRGGGVEDAVTAGEGLGKALWVQQVGAEEDETVDGAVKGPQVVVLWIHRVPDRAADCVAL 240
DRGG VED + G+ + + V+ VG E+++ + G V+ PQV VL I RV D VA
Sbjct: 300 DRGGDVEDPLAPGDRGRQGVAVEHVGLEQEQALRGPVQPPQVRVLGITRVADSGVHGVAA 121
Query: 239 LQEALDEPGGNEPSSSGHAN 180
+E LDEP G+ P++ G A+
Sbjct: 120 GEEELDEP*GDVPAAPGDAH 61
Score = 46.4 bits (95), Expect(2) = 8e-009
Identities = 22/38 (57%), Positives = 23/38 (60%)
Frame = -2 / -1
Query: 292 SFFGSTGFLTVPRTV*PFSRRRLTSQEAMNPPAPVTQT 179
+F GS G TV T *P RR LTS EA PP PVT T
Sbjct: 173 AFLGSLGSRTVACTA*PRERRSLTSHEATYPPPPVTHT 60
Score = 35.4 bits (71), Expect(2) = 8e-009
Identities = 13/18 (72%), Positives = 14/18 (77%)
Frame = -2 / -1
Query: 418 TGEAAWKTPSQPEKASAR 365
TGEA WKTPS P A+AR
Sbjct: 299 TGEATWKTPSHPATAAAR 246
Score = 35.0 bits (70), Expect(2) = 8e-016
Identities = 27/68 (39%), Positives = 35/68 (51%)
Frame = -2 / -2
Query: 661 HAPCSATVLA*QYQFWVFLQYSRSLQQVSSTGLLGSR*GFMYTVPMEDVNTTRFTPASSA 482
+A SA VLA YQF F+Q S QQ+SS L + G T +++ TT T +
Sbjct: 556 NAVSSAIVLAAVYQFSFFMQKFLSDQQLSSLILPWGQLGL**TAAVDETTTTF*TLFAEQ 377
Query: 481 AAIT*RVP 458
A T RVP
Sbjct: 376 A*RTFRVP 353
>gb|CD431095.1|CD431095 ETH1_6_A10.g1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_6_A10_A002 5', mRNA sequence
Length = 681
Score = 164 bits (352), Expect(2) = 1e-042
Identities = 69/120 (57%), Positives = 81/120 (67%)
Frame = +3 / +3
Query: 165 GQGRTVCVTGAGGFIASWLVKRLLEKGYTVRGTVRNPVDPKNDHLRALDGXXXXXXXXXX 344
GQ TVCVTGAGG++ SW+VK LLE+GY VRGTVRNP D KN HLRAL G
Sbjct: 195 GQTTTVCVTGAGGYVGSWIVKLLLERGYAVRGTVRNPDDAKNAHLRALPGATERLALCKA 374
Query: 345 XXXXPQSLAEAFSGCDGVFHAASPVTDDPEMMIEPAIRGTRYVMAAADDAGVKRVVFTSS 524
+L A +GC GVFH ASPVTDDPE M+EPA+ GTRY++ AA +AG R V +S
Sbjct: 375 DLLDYDTLRAAIAGCHGVFHTASPVTDDPEEMVEPAVTGTRYIIDAAAEAGTVRRVVLTS 554
Score = 95.0 bits (201), Expect(2) = 4e-020
Identities = 39/81 (48%), Positives = 50/81 (61%)
Frame = +3 / +3
Query: 405 AASPVTDDPEMMIEPAIRGTRYVMAAADDAGVKRVVFTSSIGTVYMNPYRDPSKPVDDTC 584
A+ D EM+ + AAA+ V+RVV TSSIG V M+P R P VD++C
Sbjct: 438 ASPVTDDPEEMVEPAVTGTRYIIDAAAEAGTVRRVVLTSSIGAVAMDPNRSPDAVVDESC 617
Query: 585 WSDLEYCKNTQNWYCYAKTVA 647
WSDL++CK T+NWYCY K VA
Sbjct: 618 WSDLDFCKKTKNWYCYXKAVA 680
Score = 72.1 bits (151), Expect(2) = 2e-026
Identities = 34/91 (37%), Positives = 55/91 (60%)
Frame = -1 / -2
Query: 452 RWLDHHLRVIGDRGGGVEDAVTAGEGLGKALWVQQVGAEEDETVDGAVKGPQVVVLWIHR 273
RWL H L ++G+ G+EDAV A +G + + V+Q+G + + + A K PQV VL +
Sbjct: 482 RWLHHFLWIVGNGRRGMEDAVAASDGRPQRVVVEQIGLAQRQPLRRAGKRPQVRVLRVVG 303
Query: 272 VPDRAADCVALLQEALDEPGGNEPSSSGHAN 180
V A+D V L++ LD+P + + +GHA+
Sbjct: 302 VAHGASDGVPPLEQELDDPRPDVAAGAGHAH 210
Score = 69.3 bits (145), Expect(2) = 2e-026
Identities = 35/57 (61%), Positives = 38/57 (66%)
Frame = -2 / -3
Query: 646 ATVLA*QYQFWVFLQYSRSLQQVSSTGLLGSR*GFMYTVPMEDVNTTRFTPASSAAA 476
AT *QYQF VFLQ SRSLQ SST G R G M T PM++V TTR T +SAAA
Sbjct: 679 ATAFX*QYQFLVFLQKSRSLQHDSSTTASGERLGSMATAPMDEVRTTRRTVPASAAA 509
Score = 52.4 bits (108), Expect(2) = 5e-015
Identities = 23/43 (53%), Positives = 26/43 (60%)
Frame = -2 / -3
Query: 292 SFFGSTGFLTVPRTV*PFSRRRLTSQEAMNPPAPVTQTVRPCP 164
+FF S+G TVP T P S R LT + PPAPVT TV CP
Sbjct: 322 AFFASSGLRTVPLTAYPLSSRSLTIHDPT*PPAPVTHTVVVCP 194
Score = 50.6 bits (104), Expect(2) = 5e-015
Identities = 23/47 (48%), Positives = 28/47 (59%)
Frame = -2 / -3
Query: 511 TTRFTPASSAAAIT*RVPRXXXXXXXXXXSVTGEAAWKTPSQPEKAS 371
T R PAS+AA++ *RVP SVTG+A WKTP QP A+
Sbjct: 541 TRRTVPASAAASMM*RVPVTAGSTISSGSSVTGDAVWKTPWQPAMAA 401
Score = 31.8 bits (63), Expect(2) = 1e-042
Identities = 14/19 (73%), Positives = 16/19 (84%)
Frame = +2 / +2
Query: 575 RHLLERPRVLQEHPELVLL 631
R +LERPR+LQE ELVLL
Sbjct: 608 RVVLERPRLLQEDQELVLL 664
Score = 25.4 bits (49), Expect(2) = 4e-020
Identities = 17/40 (42%), Positives = 20/40 (50%)
Frame = +1 / +1
Query: 184 A*PELEGSLPPGSSSASWRRATQSAARSGTLWIQRTTT*G 303
A*P + GSSS+ R T S A T +RT T*G
Sbjct: 214 A*PAPAATSGRGSSSSCSRGGTPSEAPCATPTTRRTRT*G 333
>gb|CN129279.1|CN129279 RHOH1_34_B10.g1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_34_B10_A002 5', mRNA sequence
Length = 792
Score = 175 bits (377), Expect = 1e-042
Identities = 73/120 (60%), Positives = 84/120 (70%)
Frame = +3 / +2
Query: 165 GQGRTVCVTGAGGFIASWLVKRLLEKGYTVRGTVRNPVDPKNDHLRALDGXXXXXXXXXX 344
G G+TVCVTGA G+IASWLVK LLEKGYTV+GTVRNP DPKN HL+ALDG
Sbjct: 380 GNGQTVCVTGAAGYIASWLVKMLLEKGYTVKGTVRNPDDPKNAHLKALDGAAERLILCKA 559
Query: 345 XXXXPQSLAEAFSGCDGVFHAASPVTDDPEMMIEPAIRGTRYVMAAADDAGVKRVVFTSS 524
++ A GC GVFH ASPVTDDPE M+EPA+RGT YV+ AA +AG R V +S
Sbjct: 560 DLLDYDAICRAVQGCQGVFHTASPVTDDPEQMVEPAVRGTEYVINAAAEAGTVRRVVFTS 739
Score = 91.3 bits (193), Expect(2) = 2e-024
Identities = 43/91 (47%), Positives = 59/91 (64%)
Frame = -1 / -3
Query: 452 RWLDHHLRVIGDRGGGVEDAVTAGEGLGKALWVQQVGAEEDETVDGAVKGPQVVVLWIHR 273
R L H LR++GD GGGVEDA+ A G + VQ+VG ED+ + AV+ +V VL +
Sbjct: 667 RRLHHLLRIVGDGGGGVEDALAALHGAADGVVVQEVGLAEDQPLGRAVQRLEVRVLRVIW 488
Query: 272 VPDRAADCVALLQEALDEPGGNEPSSSGHAN 180
VPD A D V+LL++ LDEP G+ P +G A+
Sbjct: 487 VPDGALDSVSLLEQHLDEPRGDVPGRAGDAH 395
Score = 67.0 bits (140), Expect(2) = 1e-019
Identities = 30/43 (69%), Positives = 32/43 (74%)
Frame = -2 / -1
Query: 292 SFFGSTGFLTVPRTV*PFSRRRLTSQEAMNPPAPVTQTVRPCP 164
+FFGS+GFLTVP TV PFS LTS EAM P APVT TV P P
Sbjct: 507 AFFGSSGFLTVPLTVYPFSSSILTSHEAMYPAAPVTHTVCPFP 379
Score = 51.5 bits (106), Expect(2) = 1e-019
Identities = 24/43 (55%), Positives = 25/43 (58%)
Frame = -2 / -1
Query: 511 TTRFTPASSAAAIT*RVPRXXXXXXXXXXSVTGEAAWKTPSQP 383
T R PAS+AA IT VPR SVTGEA WKTP QP
Sbjct: 726 TRRTVPASAAALITYSVPRTAGSTICSGSSVTGEAVWKTPWQP 598
Score = 43.7 bits (89), Expect(2) = 2e-024
Identities = 21/34 (61%), Positives = 23/34 (67%)
Frame = -2 / -1
Query: 574 STGLLGSR*GFMYTVPMEDVNTTRFTPASSAAAI 473
ST G R G M T PMEDVNTTR T +SAAA+
Sbjct: 792 STTTSGPRLGSMVTAPMEDVNTTRRTVPASAAAL 691
Score = 40.9 bits (83), Expect(2) = 1e-005
Identities = 18/30 (60%), Positives = 22/30 (73%)
Frame = +3 / +2
Query: 471 VMAAADDAGVKRVVFTSSIGTVYMNPYRDP 560
+ AAA+ V+RVVFTSSIG V M+P R P
Sbjct: 689 INAAAEAGTVRRVVFTSSIGAVTMDPSRGP 778
Score = 33.6 bits (67), Expect(2) = 1e-005
Identities = 14/25 (56%), Positives = 16/25 (64%)
Frame = +2 / +1
Query: 200 RVHCLLARQAPPGEGLHSPRHGQEP 274
RVH L+ARQ EG+H H QEP
Sbjct: 415 RVHRLVARQDAAREGIHCQGHRQEP 489
>gb|CN137521.1|CN137521 OX1_57_G07.g1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_57_G07_A002 5', mRNA sequence
Length = 775
Score = 175 bits (377), Expect = 1e-042
Identities = 73/120 (60%), Positives = 84/120 (70%)
Frame = +3 / +2
Query: 165 GQGRTVCVTGAGGFIASWLVKRLLEKGYTVRGTVRNPVDPKNDHLRALDGXXXXXXXXXX 344
G G+TVCVTGA G+IASWLVK LLEKGYTV+GTVRNP DPKN HL+ALDG
Sbjct: 371 GNGQTVCVTGAAGYIASWLVKMLLEKGYTVKGTVRNPDDPKNAHLKALDGAAERLILCKA 550
Query: 345 XXXXPQSLAEAFSGCDGVFHAASPVTDDPEMMIEPAIRGTRYVMAAADDAGVKRVVFTSS 524
++ A GC GVFH ASPVTDDPE M+EPA+RGT YV+ AA +AG R V +S
Sbjct: 551 DLLDYDAICRAVQGCQGVFHTASPVTDDPEQMVEPAVRGTEYVINAAAEAGTVRRVVFTS 730
Score = 91.3 bits (193), Expect(2) = 6e-024
Identities = 43/91 (47%), Positives = 59/91 (64%)
Frame = -1 / -1
Query: 452 RWLDHHLRVIGDRGGGVEDAVTAGEGLGKALWVQQVGAEEDETVDGAVKGPQVVVLWIHR 273
R L H LR++GD GGGVEDA+ A G + VQ+VG ED+ + AV+ +V VL +
Sbjct: 658 RRLHHLLRIVGDGGGGVEDALAALHGAADGVVVQEVGLAEDQPLGRAVQRLEVRVLRVIW 479
Query: 272 VPDRAADCVALLQEALDEPGGNEPSSSGHAN 180
VPD A D V+LL++ LDEP G+ P +G A+
Sbjct: 478 VPDGALDSVSLLEQHLDEPRGDVPGRAGDAH 386
Score = 67.0 bits (140), Expect(2) = 1e-019
Identities = 30/43 (69%), Positives = 32/43 (74%)
Frame = -2 / -2
Query: 292 SFFGSTGFLTVPRTV*PFSRRRLTSQEAMNPPAPVTQTVRPCP 164
+FFGS+GFLTVP TV PFS LTS EAM P APVT TV P P
Sbjct: 498 AFFGSSGFLTVPLTVYPFSSSILTSHEAMYPAAPVTHTVCPFP 370
Score = 51.5 bits (106), Expect(2) = 1e-019
Identities = 24/43 (55%), Positives = 25/43 (58%)
Frame = -2 / -2
Query: 511 TTRFTPASSAAAIT*RVPRXXXXXXXXXXSVTGEAAWKTPSQP 383
T R PAS+AA IT VPR SVTGEA WKTP QP
Sbjct: 717 TRRTVPASAAALITYSVPRTAGSTICSGSSVTGEAVWKTPWQP 589
Score = 41.8 bits (85), Expect(2) = 6e-024
Identities = 19/29 (65%), Positives = 21/29 (72%)
Frame = -2 / -2
Query: 559 GSR*GFMYTVPMEDVNTTRFTPASSAAAI 473
G R G M T PMEDVNTTR T +SAAA+
Sbjct: 768 GPRLGSMVTAPMEDVNTTRRTVPASAAAL 682
Score = 40.9 bits (83), Expect(2) = 1e-005
Identities = 18/30 (60%), Positives = 22/30 (73%)
Frame = +3 / +2
Query: 471 VMAAADDAGVKRVVFTSSIGTVYMNPYRDP 560
+ AAA+ V+RVVFTSSIG V M+P R P
Sbjct: 680 INAAAEAGTVRRVVFTSSIGAVTMDPSRGP 769
Score = 33.6 bits (67), Expect(2) = 1e-005
Identities = 14/25 (56%), Positives = 16/25 (64%)
Frame = +2 / +1
Query: 200 RVHCLLARQAPPGEGLHSPRHGQEP 274
RVH L+ARQ EG+H H QEP
Sbjct: 406 RVHRLVARQDAAREGIHCQGHRQEP 480
>gb|CN138545.1|CN138545 OX1_64_A03.g1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_64_A03_A002 5', mRNA sequence
Length = 784
Score = 175 bits (377), Expect = 1e-042
Identities = 73/120 (60%), Positives = 84/120 (70%)
Frame = +3 / +3
Query: 165 GQGRTVCVTGAGGFIASWLVKRLLEKGYTVRGTVRNPVDPKNDHLRALDGXXXXXXXXXX 344
G G+TVCVTGA G+IASWLVK LLEKGYTV+GTVRNP DPKN HL+ALDG
Sbjct: 351 GNGQTVCVTGAAGYIASWLVKMLLEKGYTVKGTVRNPDDPKNAHLKALDGAAERLILCKA 530
Query: 345 XXXXPQSLAEAFSGCDGVFHAASPVTDDPEMMIEPAIRGTRYVMAAADDAGVKRVVFTSS 524
++ A GC GVFH ASPVTDDPE M+EPA+RGT YV+ AA +AG R V +S
Sbjct: 531 DLLDYDAICRAVQGCQGVFHTASPVTDDPEQMVEPAVRGTEYVINAAAEAGTVRRVVFTS 710
Score = 91.3 bits (193), Expect(2) = 2e-026
Identities = 43/91 (47%), Positives = 59/91 (64%)
Frame = -1 / -3
Query: 452 RWLDHHLRVIGDRGGGVEDAVTAGEGLGKALWVQQVGAEEDETVDGAVKGPQVVVLWIHR 273
R L H LR++GD GGGVEDA+ A G + VQ+VG ED+ + AV+ +V VL +
Sbjct: 638 RRLHHLLRIVGDGGGGVEDALAALHGAADGVVVQEVGLAEDQPLGRAVQRLEVRVLRVIW 459
Query: 272 VPDRAADCVALLQEALDEPGGNEPSSSGHAN 180
VPD A D V+LL++ LDEP G+ P +G A+
Sbjct: 458 VPDGALDSVSLLEQHLDEPRGDVPGRAGDAH 366
Score = 67.0 bits (140), Expect(2) = 1e-019
Identities = 30/43 (69%), Positives = 32/43 (74%)
Frame = -2 / -1
Query: 292 SFFGSTGFLTVPRTV*PFSRRRLTSQEAMNPPAPVTQTVRPCP 164
+FFGS+GFLTVP TV PFS LTS EAM P APVT TV P P
Sbjct: 478 AFFGSSGFLTVPLTVYPFSSSILTSHEAMYPAAPVTHTVCPFP 350
Score = 56.5 bits (117), Expect(2) = 3e-010
Identities = 23/41 (56%), Positives = 29/41 (70%)
Frame = +3 / +3
Query: 471 VMAAADDAGVKRVVFTSSIGTVYMNPYRDPSKPVDDTCWSD 593
+ AAA+ V+RVVFTSS G V M+P R P VD++CWSD
Sbjct: 660 INAAAEAGTVRRVVFTSSTGAVTMDPSRGPDVVVDESCWSD 782
Score = 51.5 bits (106), Expect(2) = 1e-019
Identities = 24/43 (55%), Positives = 25/43 (58%)
Frame = -2 / -1
Query: 511 TTRFTPASSAAAIT*RVPRXXXXXXXXXXSVTGEAAWKTPSQP 383
T R PAS+AA IT VPR SVTGEA WKTP QP
Sbjct: 697 TRRTVPASAAALITYSVPRTAGSTICSGSSVTGEAVWKTPWQP 569
Score = 50.6 bits (104), Expect(2) = 2e-026
Identities = 25/41 (60%), Positives = 28/41 (68%)
Frame = -2 / -1
Query: 595 RSLQQVSSTGLLGSR*GFMYTVPMEDVNTTRFTPASSAAAI 473
RSLQ SST G R G M T P+EDVNTTR T +SAAA+
Sbjct: 784 RSLQHDSSTTTSGPRLGSMVTAPVEDVNTTRRTVPASAAAL 662
Score = 33.6 bits (67), Expect(2) = 3e-010
Identities = 14/25 (56%), Positives = 16/25 (64%)
Frame = +2 / +2
Query: 200 RVHCLLARQAPPGEGLHSPRHGQEP 274
RVH L+ARQ EG+H H QEP
Sbjct: 386 RVHRLVARQDAAREGIHCQGHRQEP 460
>gb|CW317382.1|CW317382 104_809_11473385_148_35865_077 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11473385, DNA
sequence
Length = 724
Score = 95.9 bits (203), Expect(3) = 9e-042
Identities = 37/73 (50%), Positives = 48/73 (65%)
Frame = +3 / -3
Query: 744 NASTDHVMKYLTGSATTYVNAAQAYVHVRDVAEAHVRVYEAPHAHGRYICAESTLHRGDL 923
N ST H+++Y+ G+ + NA AYV +RDVA AHV YE P A GRY+C + LHR L
Sbjct: 221 NVSTHHILRYVMGTKRSIPNAVAAYVDIRDVARAHVLAYERPAARGRYLCIGTVLHRAQL 42
Query: 924 CRVLAKLFPEYPV 962
+L LFP+YPV
Sbjct: 41 VAMLRDLFPKYPV 3
Score = 81.3 bits (171), Expect(3) = 9e-042
Identities = 30/54 (55%), Positives = 40/54 (74%)
Frame = +3 / -3
Query: 453 IRGTRYVMAAADDAGVKRVVFTSSIGTVYMNPYRDPSKPVDDTCWSDLEYCKNT 614
+ GTR V+ AA D GV+RVVFTSS G V+M+P R P +D+TCWSD ++CK +
Sbjct: 617 VEGTRNVITAAADEGVRRVVFTSSYGAVHMDPNRSPDAVLDETCWSDYDFCKRS 456
Score = 58.8 bits (122), Expect(2) = 4e-013
Identities = 30/50 (60%), Positives = 35/50 (70%)
Frame = -2 / +1
Query: 607 LQYSRSLQQVSSTGLLGSR*GFMYTVPMEDVNTTRFTPASSAAAIT*RVP 458
LQ S SLQQVSS G R G M+T P E+V TTR TP+S+AA +T RVP
Sbjct: 463 LQKS*SLQQVSSRTASGLRLGSMWTAP*EEVKTTRRTPSSAAAVMTFRVP 612
Score = 40.9 bits (83), Expect(2) = 4e-013
Identities = 23/53 (43%), Positives = 24/53 (45%)
Frame = -2 / +1
Query: 961 TGYSGKSLARTRQRSPRCRVLSAQM*RPCAWGASYTRTCASATSLTCTYACAA 803
TGY GK RC + Q RP A G S RTCA ATS T A A
Sbjct: 4 TGYLGKRSLSMATSCARCSTVPMQRYRPRAAGRS*ARTCARATSRMST*AATA 162
Score = 38.6 bits (78), Expect = 0.24
Identities = 20/39 (51%), Positives = 23/39 (58%)
Frame = -1 / +3
Query: 959 GVLREELGEDAAEVAAVQGALGADVAAVRVGRLVHPDVR 843
GVL EE+ E E+ AVQ A+V A R G LV DVR
Sbjct: 6 GVLGEEVPEHGDELCAVQHGADAEVPAARGGALVGEDVR 122
Score = 34.1 bits (68), Expect(3) = 9e-042
Identities = 15/27 (55%), Positives = 17/27 (62%)
Frame = +3 / -3
Query: 603 CKNTQNWYCYAKTVAEQGAWEVARKRG 683
C + QN YC AK +AE A EVA RG
Sbjct: 362 CVSVQNLYCCAKMMAEITATEVAAARG 282
>gb|CN137640.1|CN137640 OX1_58_D03.g1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_58_D03_A002 5', mRNA sequence
Length = 697
Score = 168 bits (361), Expect = 2e-040
Identities = 68/107 (63%), Positives = 77/107 (71%)
Frame = +3 / +2
Query: 165 GQGRTVCVTGAGGFIASWLVKRLLEKGYTVRGTVRNPVDPKNDHLRALDGXXXXXXXXXX 344
G G+TVCVTGA G+IASWLVK LLEKGYTV+GTVRNP DPKN HL+ALDG
Sbjct: 374 GNGQTVCVTGAAGYIASWLVKMLLEKGYTVKGTVRNPDDPKNAHLKALDGAAERLILCKA 553
Query: 345 XXXXPQSLAEAFSGCDGVFHAASPVTDDPEMMIEPAIRGTRYVMAAA 485
++ A GC GVFH ASPVTDDPE M+EPA+RGT YV+ AA
Sbjct: 554 DLLDYDAICRAVQGCQGVFHTASPVTDDPEQMVEPAVRGTEYVINAA 694
Score = 91.3 bits (193), Expect = 3e-017
Identities = 43/91 (47%), Positives = 59/91 (64%)
Frame = -1 / -1
Query: 452 RWLDHHLRVIGDRGGGVEDAVTAGEGLGKALWVQQVGAEEDETVDGAVKGPQVVVLWIHR 273
R L H LR++GD GGGVEDA+ A G + VQ+VG ED+ + AV+ +V VL +
Sbjct: 661 RRLHHLLRIVGDGGGGVEDALAALHGAADGVVVQEVGLAEDQPLGRAVQRLEVRVLRVIW 482
Query: 272 VPDRAADCVALLQEALDEPGGNEPSSSGHAN 180
VPD A D V+LL++ LDEP G+ P +G A+
Sbjct: 481 VPDGALDSVSLLEQHLDEPRGDVPGRAGDAH 389
Score = 67.0 bits (140), Expect(2) = 1e-016
Identities = 30/43 (69%), Positives = 32/43 (74%)
Frame = -2 / -2
Query: 292 SFFGSTGFLTVPRTV*PFSRRRLTSQEAMNPPAPVTQTVRPCP 164
+FFGS+GFLTVP TV PFS LTS EAM P APVT TV P P
Sbjct: 501 AFFGSSGFLTVPLTVYPFSSSILTSHEAMYPAAPVTHTVCPFP 373
Score = 41.4 bits (84), Expect(2) = 1e-016
Identities = 19/35 (54%), Positives = 20/35 (57%)
Frame = -2 / -2
Query: 487 SAAAIT*RVPRXXXXXXXXXXSVTGEAAWKTPSQP 383
+AA IT VPR SVTGEA WKTP QP
Sbjct: 696 AAALITYSVPRTAGSTICSGSSVTGEAVWKTPWQP 592
Score = 33.6 bits (67), Expect = 7.8
Identities = 14/25 (56%), Positives = 16/25 (64%)
Frame = +2 / +1
Query: 200 RVHCLLARQAPPGEGLHSPRHGQEP 274
RVH L+ARQ EG+H H QEP
Sbjct: 409 RVHRLVARQDAAREGIHCQGHRQEP 483
>gb|CX610621.1|CX610621 ANR1_19_G06.g1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_19_G06_A002 5', mRNA sequence
Length = 694
Score = 165 bits (355), Expect = 1e-039
Identities = 66/104 (63%), Positives = 75/104 (72%)
Frame = +3 / +3
Query: 165 GQGRTVCVTGAGGFIASWLVKRLLEKGYTVRGTVRNPVDPKNDHLRALDGXXXXXXXXXX 344
G G+TVCVTGA G+IASWLVK LLEKGYTV+GTVRNP DPKN HL+ALDG
Sbjct: 378 GNGQTVCVTGAAGYIASWLVKMLLEKGYTVKGTVRNPDDPKNAHLKALDGAAERLILCKA 557
Query: 345 XXXXPQSLAEAFSGCDGVFHAASPVTDDPEMMIEPAIRGTRYVM 476
++ A GC GVFH ASPVTDDPE M+EPA+RGT YV+
Sbjct: 558 DLLDYDAICRAVQGCQGVFHTASPVTDDPEQMVEPAVRGTEYVI 689
Score = 91.3 bits (193), Expect = 3e-017
Identities = 43/91 (47%), Positives = 59/91 (64%)
Frame = -1 / -3
Query: 452 RWLDHHLRVIGDRGGGVEDAVTAGEGLGKALWVQQVGAEEDETVDGAVKGPQVVVLWIHR 273
R L H LR++GD GGGVEDA+ A G + VQ+VG ED+ + AV+ +V VL +
Sbjct: 665 RRLHHLLRIVGDGGGGVEDALAALHGAADGVVVQEVGLAEDQPLGRAVQRLEVRVLRVIW 486
Query: 272 VPDRAADCVALLQEALDEPGGNEPSSSGHAN 180
VPD A D V+LL++ LDEP G+ P +G A+
Sbjct: 485 VPDGALDSVSLLEQHLDEPRGDVPGRAGDAH 393
Score = 67.0 bits (140), Expect(2) = 6e-016
Identities = 30/43 (69%), Positives = 32/43 (74%)
Frame = -2 / -1
Query: 292 SFFGSTGFLTVPRTV*PFSRRRLTSQEAMNPPAPVTQTVRPCP 164
+FFGS+GFLTVP TV PFS LTS EAM P APVT TV P P
Sbjct: 505 AFFGSSGFLTVPLTVYPFSSSILTSHEAMYPAAPVTHTVCPFP 377
Score = 39.1 bits (79), Expect(2) = 6e-016
Identities = 18/33 (54%), Positives = 18/33 (54%)
Frame = -2 / -1
Query: 481 AAIT*RVPRXXXXXXXXXXSVTGEAAWKTPSQP 383
A IT VPR SVTGEA WKTP QP
Sbjct: 694 ALITYSVPRTAGSTICSGSSVTGEAVWKTPWQP 596
Score = 33.6 bits (67), Expect = 7.8
Identities = 14/25 (56%), Positives = 16/25 (64%)
Frame = +2 / +2
Query: 200 RVHCLLARQAPPGEGLHSPRHGQEP 274
RVH L+ARQ EG+H H QEP
Sbjct: 413 RVHRLVARQDAAREGIHCQGHRQEP 487
>gb|CD231600.1|CD231600 SS1_22_F09.g1_A012 Salt-stressed seedlings Sorghum bicolor cDNA
clone SS1_22_F09_A012 5', mRNA sequence
Length = 697
Score = 163 bits (351), Expect = 5e-039
Identities = 65/104 (62%), Positives = 75/104 (72%)
Frame = +3 / +1
Query: 165 GQGRTVCVTGAGGFIASWLVKRLLEKGYTVRGTVRNPVDPKNDHLRALDGXXXXXXXXXX 344
G G+TVCVTGA G+IASWLVK LLEKGYTV+GTVRNP DPKN HL+ALDG
Sbjct: 382 GNGQTVCVTGAAGYIASWLVKMLLEKGYTVKGTVRNPDDPKNAHLKALDGAAERLILCKA 561
Query: 345 XXXXPQSLAEAFSGCDGVFHAASPVTDDPEMMIEPAIRGTRYVM 476
++ A GC GVFH ASPVTDDPE ++EPA+RGT YV+
Sbjct: 562 DLLDYDAICRAVQGCQGVFHTASPVTDDPEQVVEPAVRGTEYVI 693
Score = 90.0 bits (190), Expect = 8e-017
Identities = 43/91 (47%), Positives = 58/91 (63%)
Frame = -1 / -2
Query: 452 RWLDHHLRVIGDRGGGVEDAVTAGEGLGKALWVQQVGAEEDETVDGAVKGPQVVVLWIHR 273
R L H LRV+GD GGGVEDA+ A G + VQ+VG ED+ + AV+ +V VL +
Sbjct: 669 RRLHHLLRVVGDGGGGVEDALAALHGAADGVVVQEVGLAEDQPLGRAVQRLEVRVLRVIW 490
Query: 272 VPDRAADCVALLQEALDEPGGNEPSSSGHAN 180
VPD A D V+L ++ LDEP G+ P +G A+
Sbjct: 489 VPDGALDSVSLFEQHLDEPRGDVPGRAGDAH 397
Score = 67.0 bits (140), Expect(2) = 1e-015
Identities = 30/43 (69%), Positives = 32/43 (74%)
Frame = -2 / -3
Query: 292 SFFGSTGFLTVPRTV*PFSRRRLTSQEAMNPPAPVTQTVRPCP 164
+FFGS+GFLTVP TV PFS LTS EAM P APVT TV P P
Sbjct: 509 AFFGSSGFLTVPLTVYPFSSSILTSHEAMYPAAPVTHTVCPFP 381
Score = 38.2 bits (77), Expect(2) = 1e-015
Identities = 17/31 (54%), Positives = 17/31 (54%)
Frame = -2 / -3
Query: 475 IT*RVPRXXXXXXXXXXSVTGEAAWKTPSQP 383
IT VPR SVTGEA WKTP QP
Sbjct: 692 ITYSVPRTAGSTTCSGSSVTGEAVWKTPWQP 600
>gb|BE360762.1|BE360762 DG1_66_C04.g2_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 552
Score = 146 bits (314), Expect(2) = 4e-038
Identities = 56/83 (67%), Positives = 70/83 (84%)
Frame = +3 / +1
Query: 810 QAYVHVRDVAEAHVRVYEAPHAHGRYICAESTLHRGDLCRVLAKLFPEYPVPTKCKDQVN 989
QAYV VRDVA+AH+RV+E+P A GRY+CAE LHR D+ R+LAKLFPEYPVPT+C D+VN
Sbjct: 4 QAYVDVRDVADAHLRVFESPAASGRYLCAERVLHREDVVRILAKLFPEYPVPTRCSDEVN 183
Query: 990 PPVVGYKFTNQRLKDLGMDFVPV 1058
P YKF+NQ+L+DLG++F PV
Sbjct: 184 PRKQPYKFSNQKLRDLGLEFRPV 252
Score = 108 bits (231), Expect(2) = 2e-023
Identities = 53/83 (63%), Positives = 53/83 (63%)
Frame = -2 / -2
Query: 1057 TGTKSIPRSLSLWLVNLYPTTGGLTWSLHLVGTGYSGKSLARTRQRSPRCRVLSAQM*RP 878
TG S PRS S W NLY G T S HLVGTGYSGKSLAR R S R R SAQ RP
Sbjct: 251 TGRNSNPRSRSFWFENLYGCFRGFTSSEHLVGTGYSGKSLARMRTTSSRWRTRSAQRYRP 72
Query: 877 CAWGASYTRTCASATSLTCTYAC 809
A G S TR CASATS T TYAC
Sbjct: 71 DAAGLSKTRRCASATSRTSTYAC 3
Score = 76.7 bits (161), Expect = 8e-013
Identities = 42/75 (56%), Positives = 50/75 (66%)
Frame = -1 / -1
Query: 1061 ADRHEVHPQILEPLVGELVSYHRRVNLVLALGGYGVLREELGEDAAEVAAVQGALGADVA 882
A R E+ Q+ E LV ELV RV+LV A GG GVL EELGEDA +V AV+ ALGA V+
Sbjct: 255 AHRPELQSQVPELLVRELVRLLPRVHLVGAPGGDGVLGEELGEDADDVLAVEDALGAKVS 76
Query: 881 AVRVGRLVHPDVRLG 837
A R G L +VR+G
Sbjct: 75 AGRGGALEDAEVRVG 31
Score = 40.5 bits (82), Expect = 0.066
Identities = 18/35 (51%), Positives = 22/35 (62%)
Frame = +2 / +3
Query: 953 VPRTHQVQGPG*PSGGRIQVHQPEAQGSGDGLRAG 1057
VPR HQV G P+ +QV +PEA G G G+ AG
Sbjct: 147 VPRPHQVLRRGEPAEAAVQVLEPEAPGPGIGVPAG 251
Score = 34.1 bits (68), Expect(2) = 4e-038
Identities = 14/19 (73%), Positives = 16/19 (84%)
Frame = +2 / +1
Query: 1061 QCLYETVTSLQEKGMLPVL 1117
Q LY+TV +LQEKG LPVL
Sbjct: 256 QSLYDTVKNLQEKGHLPVL 312
Score = 23.1 bits (44), Expect(2) = 2e-023
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = -3 / -2
Query: 1116 STGSMPFSWRLVTVS* 1069
STG PFS R TVS*
Sbjct: 311 STGRWPFS*RFFTVS* 264
>gb|BE360688.1|BE360688 DG1_66_C04.b2_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 555
Score = 124 bits (265), Expect(3) = 2e-035
Identities = 52/94 (55%), Positives = 61/94 (64%)
Frame = +3 / +1
Query: 243 GYTVRGTVRNPVDPKNDHLRALDGXXXXXXXXXXXXXXPQSLAEAFSGCDGVFHAASPVT 422
GYTV+GTVRNP DPKN HL+ALDG ++ A GC GVFH ASPVT
Sbjct: 10 GYTVKGTVRNPDDPKNAHLKALDGAAERLILCKADLLDYDAICRAVQGCQGVFHTASPVT 189
Query: 423 DDPEMMIEPAIRGTRYVMAAADDAGVKRVVFTSS 524
DDPE M+EPA+RGT YV+ AA +AG R V +S
Sbjct: 190 DDPEQMVEPAVRGTEYVINAAAEAGTVRRVVFTS 291
Score = 119 bits (255), Expect = 9e-026
Identities = 45/71 (63%), Positives = 55/71 (77%)
Frame = +3 / +1
Query: 471 VMAAADDAGVKRVVFTSSIGTVYMNPYRDPSKPVDDTCWSDLEYCKNTQNWYCYAKTVAE 650
+ AAA+ V+RVVFTSSIG V M+P R P VD++CWSDLE+CK T+NWYCY K VAE
Sbjct: 241 INAAAEAGTVRRVVFTSSIGAVTMDPSRGPDVVVDESCWSDLEFCKKTRNWYCYGKAVAE 420
Query: 651 QGAWEVARKRG 683
Q AW+ AR+RG
Sbjct: 421 QAAWDAARQRG 453
Score = 110 bits (235), Expect(2) = 3e-037
Identities = 55/104 (52%), Positives = 60/104 (57%)
Frame = -2 / -2
Query: 784 DPVRYFITWSVLAFTVGCXXXXXXXXXXXXXXXXXXXXXXSHAPCSATVLA*QYQFWVFL 605
+P RY T ++LAFTVGC SHA CSAT L *QYQF VFL
Sbjct: 554 EPSRYLSTCAMLAFTVGCSSGPTTSTGFTTTRSTPRCRAASHAACSATALP*QYQFLVFL 375
Query: 604 QYSRSLQQVSSTGLLGSR*GFMYTVPMEDVNTTRFTPASSAAAI 473
Q SRSLQ SST G R G M T PMEDVNTTR T +SAAA+
Sbjct: 374 QNSRSLQHDSSTTTSGPRLGSMVTAPMEDVNTTRRTVPASAAAL 243
Score = 67.5 bits (141), Expect(2) = 3e-037
Identities = 33/70 (47%), Positives = 44/70 (62%)
Frame = -1 / -1
Query: 452 RWLDHHLRVIGDRGGGVEDAVTAGEGLGKALWVQQVGAEEDETVDGAVKGPQVVVLWIHR 273
R L H LR++GD GGGVEDA+ A G + VQ+VG ED+ + AV+ +V VL +
Sbjct: 219 RRLHHLLRIVGDGGGGVEDALAALHGAADGVVVQEVGLAEDQPLGRAVQRLEVRVLRVIW 40
Query: 272 VPDRAADCVA 243
VPD A D V+
Sbjct: 39 VPDGALDSVS 10
Score = 51.5 bits (106), Expect(3) = 2e-011
Identities = 24/43 (55%), Positives = 25/43 (58%)
Frame = -2 / -2
Query: 511 TTRFTPASSAAAIT*RVPRXXXXXXXXXXSVTGEAAWKTPSQP 383
T R PAS+AA IT VPR SVTGEA WKTP QP
Sbjct: 278 TRRTVPASAAALITYSVPRTAGSTICSGSSVTGEAVWKTPWQP 150
Score = 40.0 bits (81), Expect(3) = 2e-035
Identities = 19/31 (61%), Positives = 23/31 (74%)
Frame = +2 / +3
Query: 545 PLP*PQQACGRHLLERPRVLQEHPELVLLRQ 637
P P ++ R +LERPRVLQE+ ELVLLRQ
Sbjct: 315 PQPRARRRGRRVVLERPRVLQENQELVLLRQ 407
Score = 33.1 bits (66), Expect(3) = 2e-011
Identities = 13/17 (76%), Positives = 15/17 (88%)
Frame = -2 / -2
Query: 292 SFFGSTGFLTVPRTV*P 242
+FFGS+GFLTVP TV P
Sbjct: 59 AFFGSSGFLTVPLTVYP 9
Score = 25.8 bits (50), Expect(3) = 2e-035
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = +3 / +1
Query: 744 NASTDHVMKYLTGS 785
NAS HV+KYL GS
Sbjct: 514 NASIAHVLKYLDGS 555
Score = 23.5 bits (45), Expect(3) = 2e-011
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = -3 / -3
Query: 609 SCNTRGRSSRCR 574
SC TRGRSS R
Sbjct: 379 SCRTRGRSSTTR 344
>gb|BG051912.1|BG051912 RHIZ2_6_E04.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 555
Score = 143 bits (307), Expect(2) = 4e-037
Identities = 54/81 (66%), Positives = 68/81 (83%)
Frame = +3 / +2
Query: 816 YVHVRDVAEAHVRVYEAPHAHGRYICAESTLHRGDLCRVLAKLFPEYPVPTKCKDQVNPP 995
YV VRDVA+AH+RV+E+P A GRY+CAE LHR D+ R+LAKLFPEYPVPT+C D+VNP
Sbjct: 2 YVDVRDVADAHLRVFESPAASGRYLCAERVLHREDVVRILAKLFPEYPVPTRCSDEVNPR 181
Query: 996 VVGYKFTNQRLKDLGMDFVPV 1058
YKF+NQ+L+DLG++F PV
Sbjct: 182 KQAYKFSNQKLRDLGLEFRPV 244
Score = 103 bits (219), Expect(2) = 7e-022
Identities = 51/81 (62%), Positives = 51/81 (62%)
Frame = -2 / -1
Query: 1057 TGTKSIPRSLSLWLVNLYPTTGGLTWSLHLVGTGYSGKSLARTRQRSPRCRVLSAQM*RP 878
TG S PRS S W NLY G T S HLVGTGYSGKSLAR R S R R SAQ RP
Sbjct: 243 TGRNSRPRSRSFWFENLYACFRGFTSSEHLVGTGYSGKSLARMRTTSSRWRTRSAQRYRP 64
Query: 877 CAWGASYTRTCASATSLTCTY 815
A G S TR CASATS T TY
Sbjct: 63 DAAGLSKTRRCASATSRTSTY 1
Score = 78.0 bits (164), Expect = 3e-013
Identities = 42/75 (56%), Positives = 51/75 (68%)
Frame = -1 / -3
Query: 1061 ADRHEVHPQILEPLVGELVSYHRRVNLVLALGGYGVLREELGEDAAEVAAVQGALGADVA 882
A R E+ Q+ E LV ELV RV+LV A GG GVL EELGEDA +V AV+ ALGA+V+
Sbjct: 247 AHRPELQAQVPELLVRELVRLLPRVHLVGAPGGDGVLGEELGEDADDVLAVEDALGAEVS 68
Query: 881 AVRVGRLVHPDVRLG 837
A R G L +VR+G
Sbjct: 67 AGRGGALEDAEVRVG 23
Score = 40.9 bits (83), Expect = 0.048
Identities = 18/35 (51%), Positives = 22/35 (62%)
Frame = +2 / +1
Query: 953 VPRTHQVQGPG*PSGGRIQVHQPEAQGSGDGLRAG 1057
VPR HQV G P+ +QV +PEA G G G+ AG
Sbjct: 139 VPRPHQVLRRGEPAEAGVQVLEPEAPGPGPGVPAG 243
Score = 34.1 bits (68), Expect(2) = 4e-037
Identities = 14/19 (73%), Positives = 16/19 (84%)
Frame = +2 / +2
Query: 1061 QCLYETVTSLQEKGMLPVL 1117
Q LY+TV +LQEKG LPVL
Sbjct: 248 QSLYDTVKNLQEKGHLPVL 304
Score = 23.1 bits (44), Expect(2) = 7e-022
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = -3 / -1
Query: 1116 STGSMPFSWRLVTVS* 1069
STG PFS R TVS*
Sbjct: 303 STGRWPFS*RFFTVS* 256
>gb|CL178474.1|CL178474 104_386_10894614_116_31912_294 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10894614, DNA
sequence
Length = 750
Score = 83.5 bits (176), Expect(3) = 9e-037
Identities = 32/60 (53%), Positives = 44/60 (73%)
Frame = +3 / -1
Query: 438 MIEPAIRGTRYVMAAADDAGVKRVVFTSSIGTVYMNPYRDPSKPVDDTCWSDLEYCKNTQ 617
++ AI GT+ + AA D GV+RVV+TSS G V+MNP R P + VD++CWSDLE+C T+
Sbjct: 195 LMAAAIEGTKNAINAAADMGVQRVVYTSSYGAVHMNPKRSPDEVVDESCWSDLEFCLKTK 16
Score = 64.3 bits (134), Expect(3) = 9e-037
Identities = 26/33 (78%), Positives = 28/33 (84%)
Frame = +3 / -1
Query: 180 VCVTGAGGFIASWLVKRLLEKGYTVRGTVRNPV 278
VCVTGAGGFI S LVK LL++GY VRGT RNPV
Sbjct: 684 VCVTGAGGFIGSSLVKELLQRGYRVRGTARNPV 586
Score = 55.6 bits (115), Expect(3) = 2e-015
Identities = 28/53 (52%), Positives = 36/53 (67%)
Frame = -2 / +2
Query: 616 WVFLQYSRSLQQVSSTGLLGSR*GFMYTVPMEDVNTTRFTPASSAAAIT*RVP 458
+VF Q SRSLQQ+SST G GF++T P ++V TTR TP S+AA + VP
Sbjct: 17 FVFRQNSRSLQQLSSTTSSGLLFGFIWTAP*DEVYTTRCTPISAAALMAFFVP 175
Score = 46.4 bits (95), Expect(3) = 9e-037
Identities = 21/50 (42%), Positives = 26/50 (52%)
Frame = +3 / -2
Query: 279 DPKNDHLRALDGXXXXXXXXXXXXXXPQSLAEAFSGCDGVFHAASPVTDD 428
D KN HL ALDG +SL AF C+GVFH A PV+++
Sbjct: 464 DRKNAHLHALDGAKERLSLCRADVLDYKSLVAAFRLCEGVFHVACPVSNN 315
Score = 43.7 bits (89), Expect(3) = 2e-015
Identities = 20/33 (60%), Positives = 21/33 (63%)
Frame = -2 / +2
Query: 277 TGFLTVPRTV*PFSRRRLTSQEAMNPPAPVTQT 179
TGFL VP T *P LTS + M PPAPVT T
Sbjct: 587 TGFLAVPLTR*PRWSSSLTSDDPMKPPAPVTHT 685
Score = 34.1 bits (68), Expect = 5.7
Identities = 16/31 (51%), Positives = 19/31 (61%)
Frame = -1 / +1
Query: 272 VPDRAADCVALLQEALDEPGGNEPSSSGHAN 180
VP A VA L++ DE NE SSSGHA+
Sbjct: 592 VPCGAPHAVATLEQLFDERRPNEASSSGHAH 684
Score = 28.1 bits (55), Expect(3) = 2e-015
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = -2 / +1
Query: 418 TGEAAWKTPSQPEKAS 371
TG+A WKTPSQ A+
Sbjct: 325 TGQATWKTPSQSLNAA 372
>gb|CN152656.1|CN152656 WOUND1_83_A06.g1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_83_A06_A002 5', mRNA sequence
Length = 857
Score = 73.9 bits (155), Expect(4) = 3e-036
Identities = 27/42 (64%), Positives = 35/42 (83%)
Frame = +3 / +1
Query: 162 SGQGRTVCVTGAGGFIASWLVKRLLEKGYTVRGTVRNPVDPK 287
+G G+ VCVTGA G+IASW+V+ LL++GYTVR TVR+ DPK
Sbjct: 124 TGAGKVVCVTGASGYIASWIVRLLLDRGYTVRATVRDTADPK 249
Score = 60.6 bits (126), Expect(4) = 3e-036
Identities = 24/61 (39%), Positives = 35/61 (57%)
Frame = +3 / +1
Query: 501 KRVVFTSSIGTVYMNPYRDPSKPVDDTCWSDLEYCKNTQNWYCYAKTVAEQGAWEVARKR 680
K V+ +S Y R P VD+T ++D + C+ TQ WY +KT+AEQ AW+ +R
Sbjct: 481 KVVITSSMAAVSYNEKPRTPEVTVDETWFTDPQICEKTQQWYVLSKTLAEQAAWKFSRDN 660
Query: 681 G 683
G
Sbjct: 661 G 663
Score = 54.2 bits (112), Expect(3) = 8e-009
Identities = 26/42 (61%), Positives = 27/42 (64%)
Frame = -2 / -1
Query: 289 FFGSTGFLTVPRTV*PFSRRRLTSQEAMNPPAPVTQTVRPCP 164
FFGS TV RTV*P SR LT Q+AM P APVT T P P
Sbjct: 251 FFGSAVSRTVARTV*PRSRSSLTIQDAMYPDAPVTHTTFPAP 126
Score = 39.1 bits (79), Expect(4) = 3e-036
Identities = 15/35 (42%), Positives = 24/35 (68%)
Frame = +3 / +1
Query: 774 LTGSATTYVNAAQAYVHVRDVAEAHVRVYEAPHAH 878
L ++TY N++ +V+V+DVA AH+ YE P A+
Sbjct: 751 LINGSSTYPNSSFGWVNVKDVALAHILAYEIPSAN 855
Score = 38.2 bits (77), Expect(2) = 3e-004
Identities = 17/57 (29%), Positives = 28/57 (49%)
Frame = +3 / +1
Query: 417 VTDDPEMMIEPAIRGTRYVMAAADDAGVKRVVFTSSIGTVYMNPYRDPSKPVDDTCW 587
V D +++PA++GT V+ + A + +VV TSS+ V N + D W
Sbjct: 394 VKDPKAELLDPAVKGTLNVLGSCKKASITKVVITSSMAAVSYNEKPRTPEVTVDETW 564
Score = 36.3 bits (73), Expect(4) = 3e-036
Identities = 18/44 (40%), Positives = 18/44 (40%)
Frame = +3 / +1
Query: 285 KNDHLRALDGXXXXXXXXXXXXXXPQSLAEAFSGCDGVFHAASP 416
K HL ALDG S A GCD VFH ASP
Sbjct: 250 KTLHLTALDGAKDRLHLFKASLLEEGSFDAAVHGCDTVFHTASP 381
Score = 35.9 bits (72), Expect = 1.6
Identities = 15/36 (41%), Positives = 22/36 (61%)
Frame = -1 / -3
Query: 287 LWIHRVPDRAADCVALLQEALDEPGGNEPSSSGHAN 180
LW+ VP AD VA ++E D+PG + P +G A+
Sbjct: 249 LWVSGVPHGGADGVAAVEEQPDDPGRDVP*CAGDAH 142
Score = 31.8 bits (63), Expect(2) = 3e-004
Identities = 13/21 (61%), Positives = 14/21 (66%)
Frame = +2 / +3
Query: 200 RVHCLLARQAPPGEGLHSPRH 262
RVH +L RQA P LH PRH
Sbjct: 162 RVHRVLDRQAAPRPRLHRPRH 224
Score = 27.6 bits (54), Expect(3) = 8e-009
Identities = 15/30 (50%), Positives = 17/30 (56%)
Frame = -2 / -1
Query: 658 APCSATVLA*QYQFWVFLQYSRSLQQVSST 569
A CSA+VL Y VF Q S+ VSST
Sbjct: 638 AACSASVLDKTYHC*VFSQICGSVNHVSST 549
Score = 22.6 bits (43), Expect(3) = 8e-009
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = -2 / -1
Query: 415 GEAAWKTPSQPEKASAR 365
GEA W T S P A+++
Sbjct: 380 GEAVWNTVSHP*TAASK 330
>gb|CB925802.1|CB925802 ABA1_23_F05.g1_A012 Abscisic acid-treated seedlings Sorghum bicolor
cDNA clone ABA1_23_F05_A012 5', mRNA sequence
Length = 645
Score = 97.7 bits (207), Expect(3) = 3e-036
Identities = 39/85 (45%), Positives = 53/85 (62%)
Frame = +3 / +3
Query: 423 DDPEMMIEPAIRGTRYVMAAADDAGVKRVVFTSSIGTVYMNPYRDPSKPVDDTCWSDLEY 602
D + ++EPA++GT V+ AA D GV RVV SS + NP P K +DD CW+D+E
Sbjct: 363 DPEKELLEPAVKGTLNVLRAAKDCGVGRVVLMSSQAAMVPNPNWPPGKVIDDDCWADVEL 542
Query: 603 CKNTQNWYCYAKTVAEQGAWEVARK 677
K Q WY +KT+AE+ AW+ A K
Sbjct: 543 LKKLQLWYSVSKTLAEKAAWDFAEK 617
Score = 60.2 bits (125), Expect(3) = 3e-036
Identities = 24/37 (64%), Positives = 28/37 (75%)
Frame = +3 / +3
Query: 171 GRTVCVTGAGGFIASWLVKRLLEKGYTVRGTVRNPVD 281
G VCVTGA GFI SWLV+ LL++GYTV TV+N D
Sbjct: 96 GLLVCVTGASGFIGSWLVRCLLDRGYTVHATVKNLQD 206
Score = 52.4 bits (108), Expect(2) = 5e-007
Identities = 25/34 (73%), Positives = 26/34 (76%)
Frame = -2 / -3
Query: 271 FLTVPRTV*PFSRRRLTSQEAMNPPAPVTQTVRP 170
FLTV TV*P SRR+ TSQE M P APVTQT RP
Sbjct: 196 FLTVAWTV*PRSRRQRTSQEPMKPLAPVTQTRRP 95
Score = 39.6 bits (80), Expect = 0.13
Identities = 16/25 (64%), Positives = 17/25 (68%)
Frame = +2 / +2
Query: 200 RVHCLLARQAPPGEGLHSPRHGQEP 274
R+H LLAR PP LH PRH QEP
Sbjct: 125 RLHWLLARPLPP*PRLHRPRHRQEP 199
Score = 36.3 bits (73), Expect = 1.2
Identities = 16/34 (47%), Positives = 21/34 (61%)
Frame = -1 / -2
Query: 281 IHRVPDRAADCVALLQEALDEPGGNEPSSSGHAN 180
I V D D VA ++EA DEPG NE + + HA+
Sbjct: 206 ILEVLDGGVDGVAAVKEAADEPGANEAAGARHAD 105
Score = 34.5 bits (69), Expect(3) = 3e-036
Identities = 15/42 (35%), Positives = 19/42 (45%)
Frame = +3 / +3
Query: 294 HLRALDGXXXXXXXXXXXXXXPQSLAEAFSGCDGVFHAASPV 419
HL+A+ G P S+ A G GVFH ASP+
Sbjct: 222 HLQAMGGADARLRLFQMDLVDPASVQPAIEGAHGVFHLASPM 347
Score = 23.5 bits (45), Expect(2) = 5e-007
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = -2 / -3
Query: 421 VTGEAAWKTPSQPEKA 374
+ G+A WKTP P A
Sbjct: 349 IIGDARWKTPWAPSIA 302
>gb|CF428334.1|CF428334 PH1_14_C04.g1_A002 Phosphorous-deficient seedlings Sorghum bicolor
cDNA clone PH1_14_C04_A002 5', mRNA sequence
Length = 659
Score = 97.7 bits (207), Expect(3) = 2e-035
Identities = 39/85 (45%), Positives = 53/85 (62%)
Frame = +3 / +1
Query: 423 DDPEMMIEPAIRGTRYVMAAADDAGVKRVVFTSSIGTVYMNPYRDPSKPVDDTCWSDLEY 602
D + ++EPA++GT V+ AA D GV RVV SS + NP P K +DD CW+D+E
Sbjct: 382 DPEKELLEPAVKGTLNVLRAAKDCGVGRVVLMSSQAAMVPNPNWPPGKVIDDDCWADVEL 561
Query: 603 CKNTQNWYCYAKTVAEQGAWEVARK 677
K Q WY +KT+AE+ AW+ A K
Sbjct: 562 LKKLQLWYSVSKTLAEKAAWDFAEK 636
Score = 60.2 bits (125), Expect(3) = 2e-035
Identities = 24/37 (64%), Positives = 28/37 (75%)
Frame = +3 / +1
Query: 171 GRTVCVTGAGGFIASWLVKRLLEKGYTVRGTVRNPVD 281
G VCVTGA GFI SWLV+ LL++GYTV TV+N D
Sbjct: 115 GLLVCVTGASGFIGSWLVRCLLDRGYTVHATVKNLQD 225
Score = 52.4 bits (108), Expect(2) = 5e-007
Identities = 25/34 (73%), Positives = 26/34 (76%)
Frame = -2 / -1
Query: 271 FLTVPRTV*PFSRRRLTSQEAMNPPAPVTQTVRP 170
FLTV TV*P SRR+ TSQE M P APVTQT RP
Sbjct: 215 FLTVAWTV*PRSRRQRTSQEPMKPLAPVTQTRRP 114
Score = 39.6 bits (80), Expect = 0.13
Identities = 16/25 (64%), Positives = 17/25 (68%)
Frame = +2 / +3
Query: 200 RVHCLLARQAPPGEGLHSPRHGQEP 274
R+H LLAR PP LH PRH QEP
Sbjct: 144 RLHWLLARPLPP*PRLHRPRHRQEP 218
Score = 36.3 bits (73), Expect = 1.2
Identities = 16/34 (47%), Positives = 21/34 (61%)
Frame = -1 / -3
Query: 281 IHRVPDRAADCVALLQEALDEPGGNEPSSSGHAN 180
I V D D VA ++EA DEPG NE + + HA+
Sbjct: 225 ILEVLDGGVDGVAAVKEAADEPGANEAAGARHAD 124
Score = 32.2 bits (64), Expect(3) = 2e-035
Identities = 14/42 (33%), Positives = 18/42 (42%)
Frame = +3 / +1
Query: 294 HLRALDGXXXXXXXXXXXXXXPQSLAEAFSGCDGVFHAASPV 419
HL+A+ G P + A G GVFH ASP+
Sbjct: 241 HLQAMGGADARLRLFQMDLVDPAPVQPAIEGAHGVFHLASPM 366
Score = 23.5 bits (45), Expect(2) = 5e-007
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = -2 / -1
Query: 421 VTGEAAWKTPSQPEKA 374
+ G+A WKTP P A
Sbjct: 368 IIGDARWKTPWAPSIA 321
>gb|BZ347040.1|BZ347040 hw04e11.b1 WGS-SbicolorF (JM107 adapted methyl filtered) Sorghum
bicolor genomic clone hw04e11 5', DNA sequence
Length = 655
Score = 87.2 bits (184), Expect(4) = 5e-035
Identities = 32/62 (51%), Positives = 45/62 (72%)
Frame = +3 / +3
Query: 429 PEMMIEPAIRGTRYVMAAADDAGVKRVVFTSSIGTVYMNPYRDPSKPVDDTCWSDLEYCK 608
P+ ++ A+ GTR V+ AA D GV+RVVFTSS G V+M+P R P +D+TCWSD ++CK
Sbjct: 129 PQELVPVAVEGTRNVITAAADEGVRRVVFTSSYGAVHMDPNRSPDAVLDETCWSDYDFCK 308
Query: 609 NT 614
+
Sbjct: 309 RS 314
Score = 58.8 bits (122), Expect(2) = 2e-012
Identities = 30/50 (60%), Positives = 35/50 (70%)
Frame = -2 / -1
Query: 607 LQYSRSLQQVSSTGLLGSR*GFMYTVPMEDVNTTRFTPASSAAAIT*RVP 458
LQ S SLQQVSS G R G M+T P E+V TTR TP+S+AA +T RVP
Sbjct: 307 LQKS*SLQQVSSRTASGLRLGSMWTAP*EEVKTTRRTPSSAAAVMTFRVP 158
Score = 46.9 bits (96), Expect(4) = 5e-035
Identities = 17/35 (48%), Positives = 24/35 (68%)
Frame = +3 / +3
Query: 744 NASTDHVMKYLTGSATTYVNAAQAYVHVRDVAEAH 848
N ST H+++Y+ G+ + NA AYV +RDVA AH
Sbjct: 549 NVSTHHILRYVMGTKRSIPNAVAAYVDIRDVARAH 653
Score = 37.7 bits (76), Expect(4) = 5e-035
Identities = 13/18 (72%), Positives = 15/18 (83%)
Frame = +3 / +1
Query: 378 FSGCDGVFHAASPVTDDP 431
F GC GVFH ASPV++DP
Sbjct: 1 FVGCHGVFHVASPVSNDP 54
Score = 35.4 bits (71), Expect(2) = 2e-012
Identities = 14/18 (77%), Positives = 15/18 (83%)
Frame = -1 / -2
Query: 431 RVIGDRGGGVEDAVTAGE 378
RV+GDRGG VEDAV A E
Sbjct: 54 RVVGDRGGDVEDAVAADE 1
Score = 34.1 bits (68), Expect(4) = 5e-035
Identities = 15/27 (55%), Positives = 17/27 (62%)
Frame = +3 / +3
Query: 603 CKNTQNWYCYAKTVAEQGAWEVARKRG 683
C + QN YC AK +AE A EVA RG
Sbjct: 408 CVSVQNLYCCAKMMAEITATEVAAARG 488
>gb|CW346173.1|CW346173 104_849_11488883_116_36217_040 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11488883, DNA
sequence
Length = 741
Score = 102 bits (218), Expect = 1e-020
Identities = 49/94 (52%), Positives = 51/94 (54%)
Frame = -2 / +2
Query: 898 SAQM*RPCAWGASYTRTCASATSLTCTYACAAFT*VVADPVRYFITWSVLAFTVGCXXXX 719
SAQM RP A GAS TRTCASA S TCTYAC A V+A+P RY T LAFT GC
Sbjct: 374 SAQMYRPAACGASKTRTCASAASRTCTYACTALAYVLAEPFRYLSTCIRLAFTDGCSAGP 553
Query: 718 XXXXXXXXXXXXXXXXXXSHAPCSATVLA*QYQF 617
SHA CSAT *QYQF
Sbjct: 554 CTSTGFTTTRSTPRAAASSHAACSATAFP*QYQF 655
Score = 101 bits (216), Expect(3) = 7e-035
Identities = 40/55 (72%), Positives = 45/55 (81%)
Frame = +3 / -1
Query: 744 NASTDHVMKYLTGSATTYVNAAQAYVHVRDVAEAHVRVYEAPHAHGRYICAESTL 908
NAS HV+KYL GSA TY NA QAYVHVRD A+AHVRV+EAPHA GRYICA+ +
Sbjct: 528 NASLMHVLKYLNGSAKTYANAVQAYVHVRDAADAHVRVFEAPHAAGRYICADGAV 364
Score = 48.3 bits (99), Expect(3) = 7e-035
Identities = 17/23 (73%), Positives = 17/23 (73%)
Frame = +3 / -1
Query: 615 QNWYCYAKTVAEQGAWEVARKRG 683
QNWYCY K VAEQ AWE A RG
Sbjct: 657 QNWYCYGKAVAEQAAWEEAAARG 589
Score = 37.7 bits (76), Expect(3) = 7e-035
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = +3 / -1
Query: 900 STLHRGDLCRVLAKLFPEYPVPTK 971
+ LHR D+ R L K FP+YPVP +
Sbjct: 369 AVLHREDVVRTLRKFFPDYPVPER 298
>gb|CW196299.1|CW196299 104_620_11181097_148_36814_011 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11181097, DNA
sequence
Length = 737
Score = 102 bits (218), Expect = 1e-020
Identities = 49/94 (52%), Positives = 51/94 (54%)
Frame = -2 / -1
Query: 898 SAQM*RPCAWGASYTRTCASATSLTCTYACAAFT*VVADPVRYFITWSVLAFTVGCXXXX 719
SAQM RP A GAS TRTCASA S TCTYAC A V+A+P RY T LAFT GC
Sbjct: 323 SAQMYRPAACGASKTRTCASAASRTCTYACTALAYVLAEPFRYLSTCIRLAFTDGCSAGP 144
Query: 718 XXXXXXXXXXXXXXXXXXSHAPCSATVLA*QYQF 617
SHA CSAT *QYQF
Sbjct: 143 CTSTGFTTTRSTPRAAASSHAACSATAFP*QYQF 42
Score = 101 bits (216), Expect(3) = 7e-035
Identities = 40/55 (72%), Positives = 45/55 (81%)
Frame = +3 / +1
Query: 744 NASTDHVMKYLTGSATTYVNAAQAYVHVRDVAEAHVRVYEAPHAHGRYICAESTL 908
NAS HV+KYL GSA TY NA QAYVHVRD A+AHVRV+EAPHA GRYICA+ +
Sbjct: 169 NASLMHVLKYLNGSAKTYANAVQAYVHVRDAADAHVRVFEAPHAAGRYICADGAV 333
Score = 48.3 bits (99), Expect(3) = 7e-035
Identities = 17/23 (73%), Positives = 17/23 (73%)
Frame = +3 / +1
Query: 615 QNWYCYAKTVAEQGAWEVARKRG 683
QNWYCY K VAEQ AWE A RG
Sbjct: 40 QNWYCYGKAVAEQAAWEEAAARG 108
Score = 37.7 bits (76), Expect(3) = 7e-035
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = +3 / +1
Query: 900 STLHRGDLCRVLAKLFPEYPVPTK 971
+ LHR D+ R L K FP+YPVP +
Sbjct: 328 AVLHREDVVRTLRKFFPDYPVPER 399
>gb|CW480230.1|CW480230 fsbb001f239d02k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f239d02, DNA
sequence
Length = 681
Score = 102 bits (218), Expect = 1e-020
Identities = 49/94 (52%), Positives = 51/94 (54%)
Frame = -2 / +3
Query: 898 SAQM*RPCAWGASYTRTCASATSLTCTYACAAFT*VVADPVRYFITWSVLAFTVGCXXXX 719
SAQM RP A GAS TRTCASA S TCTYAC A V+A+P RY T LAFT GC
Sbjct: 348 SAQMYRPAACGASKTRTCASAASRTCTYACTALAYVLAEPFRYLSTCIRLAFTDGCSAGP 527
Query: 718 XXXXXXXXXXXXXXXXXXSHAPCSATVLA*QYQF 617
SHA CSAT *QYQF
Sbjct: 528 CTSTGFTTTRSTPRAAASSHAACSATAFP*QYQF 629
Score = 101 bits (216), Expect(3) = 7e-035
Identities = 40/55 (72%), Positives = 45/55 (81%)
Frame = +3 / -3
Query: 744 NASTDHVMKYLTGSATTYVNAAQAYVHVRDVAEAHVRVYEAPHAHGRYICAESTL 908
NAS HV+KYL GSA TY NA QAYVHVRD A+AHVRV+EAPHA GRYICA+ +
Sbjct: 502 NASLMHVLKYLNGSAKTYANAVQAYVHVRDAADAHVRVFEAPHAAGRYICADGAV 338
Score = 48.3 bits (99), Expect(3) = 7e-035
Identities = 17/23 (73%), Positives = 17/23 (73%)
Frame = +3 / -3
Query: 615 QNWYCYAKTVAEQGAWEVARKRG 683
QNWYCY K VAEQ AWE A RG
Sbjct: 631 QNWYCYGKAVAEQAAWEEAAARG 563
Score = 37.7 bits (76), Expect(3) = 7e-035
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = +3 / -3
Query: 900 STLHRGDLCRVLAKLFPEYPVPTK 971
+ LHR D+ R L K FP+YPVP +
Sbjct: 343 AVLHREDVVRTLRKFFPDYPVPER 272
>gb|CN145669.1|CN145669 WOUND1_34_B03.g1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_34_B03_A002 5', mRNA sequence
Length = 737
Score = 89.5 bits (189), Expect(3) = 3e-034
Identities = 38/87 (43%), Positives = 51/87 (58%)
Frame = +3 / +2
Query: 423 DDPEMMIEPAIRGTRYVMAAADDAGVKRVVFTSSIGTVYMNPYRDPSKPVDDTCWSDLEY 602
D ++EPA++GT V+ AA D GV RVV SS + NP K VD+ W+D+E
Sbjct: 350 DPENELVEPALKGTLSVLRAAKDCGVGRVVMVSSQTAMVPNPAWPADKVVDEDSWADIEQ 529
Query: 603 CKNTQNWYCYAKTVAEQGAWEVARKRG 683
K Q WY +KT+AE+ AW+ A K G
Sbjct: 530 LKKLQLWYNVSKTLAEKAAWDFAEKEG 610
Score = 56.5 bits (117), Expect(3) = 3e-034
Identities = 23/39 (58%), Positives = 26/39 (66%)
Frame = +3 / +2
Query: 165 GQGRTVCVTGAGGFIASWLVKRLLEKGYTVRGTVRNPVD 281
G VCVTG GFI SWLV+ LL +GYTV TV+N D
Sbjct: 74 GGSSLVCVTGGSGFIGSWLVRLLLGRGYTVHATVKNLQD 190
Score = 48.3 bits (99), Expect(3) = 6e-016
Identities = 31/68 (45%), Positives = 34/68 (50%)
Frame = -2 / -3
Query: 661 HAPCSATVLA*QYQFWVFLQYSRSLQQVSSTGLLGSR*GFMYTVPMEDVNTTRFTPASSA 482
HA SA+VL YQ FL S S Q+ SST L GF +D TTR TP S A
Sbjct: 588 HAAFSASVLETLYQS*SFLSCSMSAQESSSTTLSAGHAGFGTMAVCDDTMTTRPTPQSFA 409
Query: 481 AAIT*RVP 458
A T VP
Sbjct: 408 ARRTLSVP 385
Score = 45.5 bits (93), Expect(3) = 6e-016
Identities = 22/31 (70%), Positives = 22/31 (70%)
Frame = -2 / -3
Query: 271 FLTVPRTV*PFSRRRLTSQEAMNPPAPVTQT 179
FLTV TV*P RRR TSQE M P PVTQT
Sbjct: 180 FLTVAWTV*PRPRRRRTSQEPMKPLPPVTQT 88
Score = 39.6 bits (80), Expect(3) = 3e-034
Identities = 17/47 (36%), Positives = 22/47 (46%)
Frame = +3 / +2
Query: 279 DPKNDHLRALDGXXXXXXXXXXXXXXPQSLAEAFSGCDGVFHAASPV 419
+ + HL+A+DG P S+ A G GVFH ASPV
Sbjct: 191 ESETKHLQAMDGANSRLRLFQMDLLEPASIRPAVEGARGVFHVASPV 331
Score = 38.2 bits (77), Expect = 0.32
Identities = 16/27 (59%), Positives = 17/27 (62%)
Frame = +2 / +1
Query: 200 RVHCLLARQAPPGEGLHSPRHGQEPCG 280
R+H LLAR P LH PRH QEP G
Sbjct: 109 RLHRLLARPPPSRSRLHRPRHRQEPPG 189
Score = 29.5 bits (58), Expect(3) = 6e-016
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = -2 / -3
Query: 421 VTGEAAWKTPSQPEKASARLCG 356
+TGEA WKTP P A G
Sbjct: 333 MTGEATWKTPRAPSTAGRMEAG 268
>gb|AW678856.1|AW678856 WS1_1_A12.g1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA, mRNA
sequence
Length = 565
Score = 131 bits (280), Expect(2) = 2e-033
Identities = 49/75 (65%), Positives = 63/75 (84%)
Frame = +3 / +1
Query: 834 VAEAHVRVYEAPHAHGRYICAESTLHRGDLCRVLAKLFPEYPVPTKCKDQVNPPVVGYKF 1013
VA+AH+RV+E+P A GRY+CAE LHR D+ R+LAKLFPEYPVPT+C D+VNP YKF
Sbjct: 1 VADAHLRVFESPAASGRYLCAERVLHREDVVRILAKLFPEYPVPTRCSDEVNPRKQPYKF 180
Query: 1014 TNQRLKDLGMDFVPV 1058
+NQ+L+DLG++F PV
Sbjct: 181 SNQKLRDLGLEFRPV 225
Score = 92.3 bits (195), Expect(2) = 1e-018
Identities = 46/74 (62%), Positives = 46/74 (62%)
Frame = -2 / -3
Query: 1057 TGTKSIPRSLSLWLVNLYPTTGGLTWSLHLVGTGYSGKSLARTRQRSPRCRVLSAQM*RP 878
TG S PRS S W NLY G T S HLVGTGYSGKSLAR R S R R SAQ RP
Sbjct: 224 TGRNSNPRSRSFWFENLYGCFRGFTSSEHLVGTGYSGKSLARMRTTSSRWRTRSAQRYRP 45
Query: 877 CAWGASYTRTCASA 836
A G S TR CASA
Sbjct: 44 DAAGLSKTRRCASA 3
Score = 78.0 bits (164), Expect = 3e-013
Identities = 42/75 (56%), Positives = 51/75 (68%)
Frame = -1 / -2
Query: 1061 ADRHEVHPQILEPLVGELVSYHRRVNLVLALGGYGVLREELGEDAAEVAAVQGALGADVA 882
A R E+ Q+ E LV ELV RV+LV A GG GVL EELGEDA +V AV+ ALGA+V+
Sbjct: 228 AHRPELQSQVPELLVRELVRLLPRVHLVGAPGGDGVLGEELGEDADDVLAVEDALGAEVS 49
Query: 881 AVRVGRLVHPDVRLG 837
A R G L +VR+G
Sbjct: 48 AGRGGALEDAEVRVG 4
Score = 40.5 bits (82), Expect = 0.066
Identities = 18/35 (51%), Positives = 22/35 (62%)
Frame = +2 / +3
Query: 953 VPRTHQVQGPG*PSGGRIQVHQPEAQGSGDGLRAG 1057
VPR HQV G P+ +QV +PEA G G G+ AG
Sbjct: 120 VPRPHQVLRRGEPAEAAVQVLEPEAPGPGIGVPAG 224
Score = 34.1 bits (68), Expect(2) = 2e-033
Identities = 14/19 (73%), Positives = 16/19 (84%)
Frame = +2 / +1
Query: 1061 QCLYETVTSLQEKGMLPVL 1117
Q LY+TV +LQEKG LPVL
Sbjct: 229 QSLYDTVKNLQEKGHLPVL 285
Score = 23.1 bits (44), Expect(2) = 1e-018
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = -3 / -3
Query: 1116 STGSMPFSWRLVTVS* 1069
STG PFS R TVS*
Sbjct: 284 STGRWPFS*RFFTVS* 237
>gb|CX608316.1|CX608316 ANR1_37_H09.g1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_37_H09_A002 5', mRNA sequence
Length = 535
Score = 144 bits (310), Expect = 2e-033
Identities = 59/94 (62%), Positives = 65/94 (69%)
Frame = +3 / +1
Query: 165 GQGRTVCVTGAGGFIASWLVKRLLEKGYTVRGTVRNPVDPKNDHLRALDGXXXXXXXXXX 344
G G+TVCVTGA G+IASWLVK LLEKGYTV+GTVRNP DPKN HL ALDG
Sbjct: 253 GNGQTVCVTGAAGYIASWLVKMLLEKGYTVKGTVRNPDDPKNAHLMALDGAAERLILCKT 432
Query: 345 XXXXPQSLAEAFSGCDGVFHAASPVTDDPEMMIE 446
++ A GC GVFH ASPVTDDPE M+E
Sbjct: 433 DLLDYDAICRAVQGCQGVFHTASPVTDDPEQMVE 534
Score = 90.9 bits (192), Expect = 4e-017
Identities = 42/89 (47%), Positives = 58/89 (65%)
Frame = -1 / -2
Query: 446 LDHHLRVIGDRGGGVEDAVTAGEGLGKALWVQQVGAEEDETVDGAVKGPQVVVLWIHRVP 267
L H LR++GD GGGVEDA+ A G + VQ+VG ED+ + AV+ +V VL + VP
Sbjct: 534 LHHLLRIVGDGGGGVEDALAALHGAADGVVVQEVGLAEDQPLGRAVQRHEVRVLRVIWVP 355
Query: 266 DRAADCVALLQEALDEPGGNEPSSSGHAN 180
D A D V+LL++ LDEP G+ P +G A+
Sbjct: 354 DGALDSVSLLEQHLDEPRGDVPGRAGDAH 268
Score = 67.0 bits (140), Expect(2) = 2e-013
Identities = 30/43 (69%), Positives = 32/43 (74%)
Frame = -2 / -3
Query: 292 SFFGSTGFLTVPRTV*PFSRRRLTSQEAMNPPAPVTQTVRPCP 164
+FFGS+GFLTVP TV PFS LTS EAM P APVT TV P P
Sbjct: 380 AFFGSSGFLTVPLTVYPFSSSILTSHEAMYPAAPVTHTVCPFP 252
Score = 33.6 bits (67), Expect = 7.8
Identities = 14/25 (56%), Positives = 16/25 (64%)
Frame = +2 / +3
Query: 200 RVHCLLARQAPPGEGLHSPRHGQEP 274
RVH L+ARQ EG+H H QEP
Sbjct: 288 RVHRLVARQDAAREGIHCQGHRQEP 362
Score = 30.9 bits (61), Expect(2) = 2e-013
Identities = 11/13 (84%), Positives = 11/13 (84%)
Frame = -2 / -3
Query: 421 VTGEAAWKTPSQP 383
VTGEA WKTP QP
Sbjct: 509 VTGEAVWKTPWQP 471
>gb|CW051453.1|CW051453 104_291_10515256_114_30192 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10515256, DNA
sequence
Length = 510
Score = 76.7 bits (161), Expect(3) = 8e-033
Identities = 31/47 (65%), Positives = 35/47 (74%)
Frame = +3 / -2
Query: 744 NASTDHVMKYLTGSATTYVNAAQAYVHVRDVAEAHVRVYEAPHAHGR 884
N ST H++KYLTG YVN + AYVHV+D AEAHVRV EAP A GR
Sbjct: 401 NTSTLHILKYLTGQTKEYVNESHAYVHVKDAAEAHVRVLEAPGAGGR 261
Score = 68.4 bits (143), Expect(3) = 8e-033
Identities = 25/40 (62%), Positives = 32/40 (80%)
Frame = +3 / -2
Query: 882 RYICAESTLHRGDLCRVLAKLFPEYPVPTKCKDQVNPPVV 1001
RY+CAE TLHRG+LCR+LA LFPEYP+PT+ + P V+
Sbjct: 260 RYVCAERTLHRGELCRILAGLFPEYPIPTRYGNSWLPGVL 141
Score = 61.1 bits (127), Expect(2) = 8e-018
Identities = 29/51 (56%), Positives = 32/51 (62%)
Frame = -2 / +1
Query: 883 RPCAWGASYTRTCASATSLTCTYACAAFT*VVADPVRYFITWSVLAFTVGC 731
RP A GAS T TCASA SLTCT AC + T + PVRY VL F +GC
Sbjct: 262 RPPAPGASSTLTCASAASLTCT*ACDSLTYSLVCPVRYLRMCRVLVFMLGC 414
Score = 51.5 bits (106), Expect(2) = 8e-018
Identities = 22/28 (78%), Positives = 23/28 (82%)
Frame = -2 / +1
Query: 973 HLVGTGYSGKSLARTRQRSPRCRVLSAQ 890
+LVG GYSGKS AR RQ SPRCRV SAQ
Sbjct: 169 YLVGIGYSGKSPARIRQSSPRCRVRSAQ 252
Score = 42.3 bits (86), Expect(2) = 2e-004
Identities = 18/24 (75%), Positives = 20/24 (83%)
Frame = -1 / +3
Query: 956 VLREELGEDAAEVAAVQGALGADV 885
VLREE GED AE+AAVQ AL AD+
Sbjct: 186 VLREESGEDTAELAAVQSALSADI 257
Score = 35.9 bits (72), Expect(3) = 8e-033
Identities = 13/16 (81%), Positives = 14/16 (87%)
Frame = +3 / -1
Query: 636 KTVAEQGAWEVARKRG 683
KT+AEQGAWE AR RG
Sbjct: 510 KTIAEQGAWEAARARG 463
Score = 24.4 bits (47), Expect(2) = 2e-004
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = -1 / +3
Query: 866 RLVHPDVRLG 837
RL HPDVRLG
Sbjct: 279 RLEHPDVRLG 308
>gb|CW153631.1|CW153631 104_555_11145149_148_36344_025 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11145149, DNA
sequence
Length = 726
Score = 143 bits (306), Expect = 8e-033
Identities = 56/62 (90%), Positives = 59/62 (95%)
Frame = +3 / +2
Query: 432 EMMIEPAIRGTRYVMAAADDAGVKRVVFTSSIGTVYMNPYRDPSKPVDDTCWSDLEYCKN 611
EMMIEPAIRGT+YVM AA D GVKRVVFTSSIGTVYMNPYR+P+KPVDDTCWSDLEYCKN
Sbjct: 68 EMMIEPAIRGTQYVMTAAADTGVKRVVFTSSIGTVYMNPYREPNKPVDDTCWSDLEYCKN 247
Query: 612 TQ 617
TQ
Sbjct: 248 TQ 253
Score = 105 bits (224), Expect = 2e-021
Identities = 47/53 (88%), Positives = 48/53 (90%)
Frame = -2 / -1
Query: 613 VFLQYSRSLQQVSSTGLLGSR*GFMYTVPMEDVNTTRFTPASSAAAIT*RVPR 455
VFLQYSRSLQQVSSTGLLGSR*GFMYTVPMEDVNTTR TP S+AA IT VPR
Sbjct: 249 VFLQYSRSLQQVSSTGLLGSR*GFMYTVPMEDVNTTRLTPVSAAAVITYCVPR 91
Score = 52.8 bits (109), Expect = 1e-005
Identities = 19/23 (82%), Positives = 20/23 (86%)
Frame = -3 / -2
Query: 609 SCNTRGRSSRCRPQACWGHGRGS 541
SCNT+ RSSRCR QACW HGRGS
Sbjct: 245 SCNTQDRSSRCRRQACWVHGRGS 177
Score = 50.6 bits (104), Expect = 6e-005
Identities = 25/55 (45%), Positives = 28/55 (50%)
Frame = -1 / -3
Query: 596 EVAPAGVVHRLXXXXXXXXXXXXXXGREHDALHSGXXXXXXXXXXAPDRWLDHHL 432
++APAGVV RL GREHDAL +G APD WLDHHL
Sbjct: 232 KIAPAGVVDRLVGFTVGVHVHCADGGREHDALDAGVCRRRHHILCAPDCWLDHHL 68
Score = 44.1 bits (90), Expect = 0.005
Identities = 19/24 (79%), Positives = 20/24 (83%)
Frame = +2 / +1
Query: 542 EPLP*PQQACGRHLLERPRVLQEH 613
EPLP* QQAC RHLLER VLQE+
Sbjct: 178 EPLP*TQQACRRHLLERS*VLQEY 249
>gb|CX608225.1|CX608225 ANR1_37_H09.b1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_37_H09_A002 3', mRNA sequence
Length = 560
Score = 127 bits (272), Expect(2) = 2e-032
Identities = 47/73 (64%), Positives = 61/73 (83%)
Frame = +3 / +3
Query: 840 EAHVRVYEAPHAHGRYICAESTLHRGDLCRVLAKLFPEYPVPTKCKDQVNPPVVGYKFTN 1019
+AH+RV+E+P A GRY+CAE LHR D+ R+LAKLFPEYPVPT+C D+VNP YKF+N
Sbjct: 3 DAHLRVFESPAASGRYLCAERVLHREDVVRILAKLFPEYPVPTRCSDEVNPRKQPYKFSN 182
Query: 1020 QRLKDLGMDFVPV 1058
Q+L+DLG++F PV
Sbjct: 183 QKLRDLGLEFRPV 221
Score = 88.1 bits (186), Expect(2) = 2e-017
Identities = 44/73 (60%), Positives = 44/73 (60%)
Frame = -2 / -2
Query: 1057 TGTKSIPRSLSLWLVNLYPTTGGLTWSLHLVGTGYSGKSLARTRQRSPRCRVLSAQM*RP 878
TG S PRS S W NLY G T S HLVGTGYSGKSLAR R S R R SA RP
Sbjct: 220 TGRNSNPRSRSFWFENLYGCFRGFTSSEHLVGTGYSGKSLARMRTTSSRWRTRSAHRYRP 41
Query: 877 CAWGASYTRTCAS 839
A G S TR CAS
Sbjct: 40 DAAGLSKTRRCAS 2
Score = 72.5 bits (152), Expect = 1e-011
Identities = 41/74 (55%), Positives = 49/74 (66%)
Frame = -1 / -1
Query: 1061 ADRHEVHPQILEPLVGELVSYHRRVNLVLALGGYGVLREELGEDAAEVAAVQGALGADVA 882
A R E+ Q+ E LV ELV RV+LV A GG GVL EELGEDA +V AV+ ALGA V+
Sbjct: 224 AHRPELQSQVPELLVRELVRLLPRVHLVGAPGGDGVLGEELGEDADDVLAVEDALGA*VS 45
Query: 881 AVRVGRLVHPDVRL 840
A R G L +VR+
Sbjct: 44 AGRGGALEDAEVRV 3
Score = 40.5 bits (82), Expect = 0.066
Identities = 18/35 (51%), Positives = 22/35 (62%)
Frame = +2 / +2
Query: 953 VPRTHQVQGPG*PSGGRIQVHQPEAQGSGDGLRAG 1057
VPR HQV G P+ +QV +PEA G G G+ AG
Sbjct: 116 VPRPHQVLRRGEPAEAAVQVLEPEAPGPGIGVPAG 220
Score = 34.1 bits (68), Expect(2) = 2e-032
Identities = 14/19 (73%), Positives = 16/19 (84%)
Frame = +2 / +3
Query: 1061 QCLYETVTSLQEKGMLPVL 1117
Q LY+TV +LQEKG LPVL
Sbjct: 225 QSLYDTVKNLQEKGHLPVL 281
Score = 23.1 bits (44), Expect(2) = 2e-017
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = -3 / -2
Query: 1116 STGSMPFSWRLVTVS* 1069
STG PFS R TVS*
Sbjct: 280 STGRWPFS*RFFTVS* 233
>gb|CW247120.1|CW247120 104_708_11221624_148_36079_064 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11221624, DNA
sequence
Length = 746
Score = 68.9 bits (144), Expect(3) = 4e-032
Identities = 26/36 (72%), Positives = 30/36 (83%)
Frame = +3 / -1
Query: 168 QGRTVCVTGAGGFIASWLVKRLLEKGYTVRGTVRNP 275
Q + VCVTGAGGFI SW+VK LL++GY VRGT RNP
Sbjct: 632 QQQLVCVTGAGGFIGSWVVKELLQRGYLVRGTARNP 525
Score = 61.6 bits (128), Expect(3) = 4e-032
Identities = 25/49 (51%), Positives = 34/49 (69%)
Frame = +3 / -3
Query: 429 PEMMIEPAIRGTRYVMAAADDAGVKRVVFTSSIGTVYMNPYRDPSKPVD 575
P+ ++ A+ GTR V+ AA D GV+RVVFTSS G V+M+P R P +D
Sbjct: 147 PQELVPVAVEGTRNVITAAADEGVRRVVFTSSYGAVHMDPNRSPDAVLD 1
Score = 58.8 bits (122), Expect(3) = 8e-022
Identities = 28/49 (57%), Positives = 34/49 (69%)
Frame = -1 / +3
Query: 431 RVIGDRGGGVEDAVTAGEGLGKALWVQQVGAEEDETVDGAVKGPQVVVL 285
RV+GDRGG VEDAV A EG + V+ VGA + ET+ GAV+ QV VL
Sbjct: 222 RVVGDRGGDVEDAVAADEGGAEGGAVEDVGAAQGETLLGAVQSQQVRVL 368
Score = 53.8 bits (111), Expect(3) = 4e-032
Identities = 24/49 (48%), Positives = 26/49 (53%)
Frame = +3 / -1
Query: 285 KNDHLRALDGXXXXXXXXXXXXXXPQSLAEAFSGCDGVFHAASPVTDDP 431
KN HL ALDG SL AF GC GVFH ASPV++DP
Sbjct: 368 KNAHLLALDGAKERLTLCRADVLDSASLRAAFVGCHGVFHVASPVSNDP 222
Score = 45.5 bits (93), Expect(3) = 8e-022
Identities = 22/38 (57%), Positives = 23/38 (60%)
Frame = -2 / +1
Query: 280 STGFLTVPRTV*PFSRRRLTSQEAMNPPAPVTQTVRPC 167
S GFL VP T *P LT+ E M PPAPVTQT C
Sbjct: 520 SPGFLAVPLTR*PRWSSSLTTHEPMKPPAPVTQTSCCC 633
Score = 44.6 bits (91), Expect(3) = 8e-022
Identities = 20/34 (58%), Positives = 25/34 (73%)
Frame = -2 / +2
Query: 559 GSR*GFMYTVPMEDVNTTRFTPASSAAAIT*RVP 458
G R G M+T P E+V TTR TP+S+AA +T RVP
Sbjct: 17 GLRLGSMWTAP*EEVKTTRRTPSSAAAVMTFRVP 118
Score = 35.0 bits (70), Expect(2) = 4e-004
Identities = 13/18 (72%), Positives = 14/18 (77%)
Frame = -2 / +1
Query: 418 TGEAAWKTPSQPEKASAR 365
TGEA WKTP QP KA+ R
Sbjct: 235 TGEATWKTPWQPTKAARR 288
Score = 34.1 bits (68), Expect(2) = 4e-004
Identities = 14/32 (43%), Positives = 21/32 (65%)
Frame = -1 / +3
Query: 275 RVPDRAADCVALLQEALDEPGGNEPSSSGHAN 180
RVP + D VA L++ LD P +E + +GHA+
Sbjct: 525 RVPCSSPDKVAALEQLLDHPRTDEAAGAGHAD 620
>gb|CF070740.1|CF070740 FE1_4_B05.b1_A002 Iron-deficient seedlings Sorghum bicolor cDNA clone
FE1_4_B05_A002 3', mRNA sequence
Length = 503
Score = 98.7 bits (209), Expect(3) = 3e-031
Identities = 37/71 (52%), Positives = 48/71 (67%)
Frame = +3 / +3
Query: 846 HVRVYEAPHAHGRYICAESTLHRGDLCRVLAKLFPEYPVPTKCKDQVNPPVVGYKFTNQR 1025
HV YE P A GRY+C + LHR L +L LFP+YPV KC+D P V Y+F+NQR
Sbjct: 144 HVLAYERPAARGRYLCIGTVLHRAQLVAMLRDLFPKYPVTAKCEDDGKPMVKPYRFSNQR 323
Query: 1026 LKDLGMDFVPV 1058
L+DLG++F P+
Sbjct: 324 LRDLGLEFTPL 356
Score = 68.0 bits (142), Expect(3) = 5e-018
Identities = 35/71 (49%), Positives = 37/71 (52%)
Frame = -2 / -2
Query: 1057 TGTKSIPRSLSLWLVNLYPTTGGLTWSLHLVGTGYSGKSLARTRQRSPRCRVLSAQM*RP 878
+G S PRSLSLWL NLY T GL S HL TGY GK RC + Q RP
Sbjct: 355 SGVNSKPRSLSLWLENLYGFTIGLPSSSHLAVTGYLGKRSLSMATSCARCSTVPMQRYRP 176
Query: 877 CAWGASYTRTC 845
A G S RTC
Sbjct: 175 RAAGRS*ARTC 143
Score = 67.5 bits (141), Expect(2) = 5e-014
Identities = 35/71 (49%), Positives = 41/71 (57%)
Frame = -1 / -1
Query: 1055 RHEVHPQILEPLVGELVSYHRRVNLVLALGGYGVLREELGEDAAEVAAVQGALGADVAAV 876
R E Q+ EPLVGE V H + +V ALG GVL EE+ E E+ AVQ A+V A
Sbjct: 353 RSEFQAQVSEPLVGEPVRLHHWLTVVFALGRDGVLGEEVPEHGDELCAVQHGADAEVPAA 174
Query: 875 RVGRLVHPDVR 843
R G LV DVR
Sbjct: 173 RGGALVGEDVR 141
Score = 46.0 bits (94), Expect(3) = 3e-031
Identities = 17/26 (65%), Positives = 21/26 (80%)
Frame = +3 / +2
Query: 363 SLAEAFSGCDGVFHAASPVTDDPEMM 440
SL AF GC GVFH ASPV++DPE++
Sbjct: 29 SLRAAFVGCHGVFHVASPVSNDPELV 106
Score = 45.1 bits (92), Expect(3) = 5e-018
Identities = 20/34 (58%), Positives = 24/34 (70%)
Frame = -1 / -2
Query: 440 HHLRVIGDRGGGVEDAVTAGEGLGKALWVQQVGA 339
+ LRV+GDRGG VEDAV A EG + V+ VGA
Sbjct: 106 NQLRVVGDRGGDVEDAVAADEGGAEGGAVEDVGA 5
Score = 35.0 bits (70), Expect(2) = 5e-014
Identities = 13/18 (72%), Positives = 14/18 (77%)
Frame = -2 / -3
Query: 418 TGEAAWKTPSQPEKASAR 365
TGEA WKTP QP KA+ R
Sbjct: 84 TGEATWKTPWQPTKAARR 31
Score = 35.0 bits (70), Expect(3) = 3e-031
Identities = 14/23 (60%), Positives = 17/23 (73%)
Frame = +2 / +3
Query: 1061 QCLYETVTSLQEKGMLPVLPTKQ 1129
+ LYETV LQ+KG LPV+ KQ
Sbjct: 360 ESLYETVVCLQQKGHLPVIKQKQ 428
Score = 21.7 bits (41), Expect(3) = 5e-018
Identities = 10/21 (47%), Positives = 11/21 (52%)
Frame = -3 / -2
Query: 1128 CFVGSTGSMPFSWRLVTVS*R 1066
CF TG PF + TVS R
Sbjct: 427 CFCLMTGRWPFCCKHTTVSYR 365
>gb|CW317851.1|CW317851 104_809_11473636_148_35864_002 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11473636, DNA
sequence
Length = 745
Score = 98.2 bits (208), Expect(3) = 1e-030
Identities = 41/76 (53%), Positives = 50/76 (65%)
Frame = +3 / -1
Query: 744 NASTDHVMKYLTGSATTYVNAAQAYVHVRDVAEAHVRVYEAPHAHGRYICAESTLHRGDL 923
N ST+HV +YL G+ + NA AYV VRDVA AHV YE P A GRY+C + LHR L
Sbjct: 595 NFSTNHVARYLMGTKRSIPNAVAAYVDVRDVARAHVLAYERPSACGRYLCIGTVLHREQL 416
Query: 924 CRVLAKLFPEYPVPTK 971
+L +LFP+YPV K
Sbjct: 415 VAMLKELFPQYPVTAK 368
Score = 60.6 bits (126), Expect(2) = 1e-012
Identities = 35/81 (43%), Positives = 39/81 (48%)
Frame = -2 / +3
Query: 973 HLVGTGYSGKSLARTRQRSPRCRVLSAQM*RPCAWGASYTRTCASATSLTCTYACAAFT* 794
+L TGY GKS RC + Q *RP A G S RTCA ATS T T A A
Sbjct: 366 YLAVTGYCGKSSLSMATSCSRCSTVPMQR*RPHALGRS*ARTCARATSRTST*AATALGM 545
Query: 793 VVADPVRYFITWSVLAFTVGC 731
P+R TW VL +V C
Sbjct: 546 ERLVPMR*RATWLVLKLSVCC 608
Score = 43.7 bits (89), Expect(2) = 5e-007
Identities = 23/43 (53%), Positives = 26/43 (60%)
Frame = -1 / +2
Query: 971 LGGYGVLREELGEDAAEVAAVQGALGADVAAVRVGRLVHPDVR 843
LG GVLREE E E+ AVQ A+VA+ R G LV DVR
Sbjct: 368 LGCDGVLREEFLEHGDELFAVQHGADAEVASARAGALVGEDVR 496
Score = 42.8 bits (87), Expect(3) = 1e-030
Identities = 14/30 (46%), Positives = 22/30 (73%)
Frame = +3 / -1
Query: 969 KCKDQVNPPVVGYKFTNQRLKDLGMDFVPV 1058
+C+D P +KF+NQRL+DLG++F P+
Sbjct: 259 RCEDDGKPMAKPFKFSNQRLRDLGLEFTPL 170
Score = 34.5 bits (69), Expect(2) = 1e-012
Identities = 17/30 (56%), Positives = 18/30 (60%)
Frame = -2 / +3
Query: 1057 TGTKSIPRSLSLWLVNLYPTTGGLTWSLHL 968
+G S PRSLSLWL NL GL S HL
Sbjct: 171 SGVNSKPRSLSLWLENLNGFAIGLPSSSHL 260
Score = 34.1 bits (68), Expect = 5.7
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = +1 / -2
Query: 1006 TSSPTRGSRIWGWTSCRS 1059
+SSPTRGS W W+S RS
Sbjct: 222 SSSPTRGSGTWAWSSLRS 169
Score = 32.7 bits (65), Expect(3) = 1e-030
Identities = 13/21 (61%), Positives = 16/21 (76%)
Frame = +2 / -1
Query: 1067 LYETVTSLQEKGMLPVLPTKQ 1129
LYETV LQ+KG LPV+ +Q
Sbjct: 160 LYETVVCLQQKGHLPVIQQQQ 98
Score = 32.2 bits (64), Expect(2) = 5e-007
Identities = 14/29 (48%), Positives = 19/29 (65%)
Frame = -1 / +2
Query: 1058 DRHEVHPQILEPLVGELVSYHRRVNLVLA 972
+R E+ Q+ EPLVGEL R+ +VLA
Sbjct: 170 ERSELQAQVPEPLVGELERLRHRLAVVLA 256
>gb|CW090504.1|CW090504 104_436_10949318_116_32611_057 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10949318, DNA
sequence
Length = 722
Score = 65.7 bits (137), Expect(3) = 2e-029
Identities = 25/40 (62%), Positives = 31/40 (77%)
Frame = +3 / -2
Query: 180 VCVTGAGGFIASWLVKRLLEKGYTVRGTVRNPVDPKNDHL 299
VCVTGAGGFI SWLVK LL++GY V GT R+P + + H+
Sbjct: 619 VCVTGAGGFIGSWLVKELLQRGYAVSGTARDPGE*VSQHV 500
Score = 63.8 bits (133), Expect(3) = 2e-029
Identities = 27/53 (50%), Positives = 30/53 (56%)
Frame = +3 / -3
Query: 273 PVDPKNDHLRALDGXXXXXXXXXXXXXXPQSLAEAFSGCDGVFHAASPVTDDP 431
P D KN HLRALDG SL AFS CDGVFH ASP+++DP
Sbjct: 393 PEDSKNSHLRALDGAQERLSLYHADVLDYMSLRRAFSLCDGVFHVASPISNDP 235
Score = 45.1 bits (92), Expect(3) = 2e-029
Identities = 20/30 (66%), Positives = 23/30 (76%)
Frame = +3 / -2
Query: 453 IRGTRYVMAAADDAGVKRVVFTSSIGTVYM 542
I GT+ VM AA D GV+RVVFTSS G V+M
Sbjct: 91 IEGTKNVMNAAADMGVQRVVFTSSYGAVHM 2
Score = 44.1 bits (90), Expect(2) = 3e-006
Identities = 19/32 (59%), Positives = 23/32 (71%)
Frame = -1 / +2
Query: 275 RVPDRAADCVALLQEALDEPGGNEPSSSGHAN 180
RVP A D VA L++ LD+P NE SSSGHA+
Sbjct: 524 RVPGGATDSVAALEQLLDQP*PNEASSSGHAH 619
Score = 40.5 bits (82), Expect(2) = 0.001
Identities = 19/34 (55%), Positives = 20/34 (58%)
Frame = -2 / +3
Query: 280 STGFLTVPRTV*PFSRRRLTSQEAMNPPAPVTQT 179
S G L VP T *P LTS + M PPAPVT T
Sbjct: 519 SPGSLAVPLTA*PRWSSSLTSHDPMKPPAPVTHT 620
Score = 32.2 bits (64), Expect(2) = 3e-006
Identities = 16/49 (32%), Positives = 27/49 (55%)
Frame = -1 / +1
Query: 431 RVIGDRGGGVEDAVTAGEGLGKALWVQQVGAEEDETVDGAVKGPQVVVL 285
R+IG RGG +E+ +T EG K VQ + + +++ PQ+ +L
Sbjct: 235 RIIGYRGGNMENTIT*AEGTTK*HVVQHISMVQR*PFLSSIQCPQMGIL 381
Score = 26.7 bits (52), Expect(2) = 0.001
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = -2 / +2
Query: 415 GEAAWKTPSQPEKA 374
GEA WKTPS KA
Sbjct: 251 GEATWKTPSHKLKA 292
>gb|CB925645.1|CB925645 ABA1_22_G02.g1_A012 Abscisic acid-treated seedlings Sorghum bicolor
cDNA clone ABA1_22_G02_A012 5', mRNA sequence
Length = 582
Score = 72.5 bits (152), Expect(3) = 3e-029
Identities = 32/75 (42%), Positives = 43/75 (57%)
Frame = +3 / +3
Query: 423 DDPEMMIEPAIRGTRYVMAAADDAGVKRVVFTSSIGTVYMNPYRDPSKPVDDTCWSDLEY 602
D ++EPA++GT V+ AA D GV RVV SS + NP K VD+ W+D+E
Sbjct: 357 DPENELVEPALKGTLSVLRAAKDCGVGRVVMVSSQTAMVPNPAWPADKVVDEDSWADIEQ 536
Query: 603 CKNTQNWYCYAKTVA 647
K Q WY +KT+A
Sbjct: 537 LKKLQLWYNVSKTLA 581
Score = 56.5 bits (117), Expect(3) = 3e-029
Identities = 23/39 (58%), Positives = 26/39 (66%)
Frame = +3 / +3
Query: 165 GQGRTVCVTGAGGFIASWLVKRLLEKGYTVRGTVRNPVD 281
G VCVTG GFI SWLV+ LL +GYTV TV+N D
Sbjct: 81 GGSSLVCVTGGSGFIGSWLVRLLLGRGYTVHATVKNLQD 197
Score = 45.5 bits (93), Expect(3) = 3e-014
Identities = 22/31 (70%), Positives = 22/31 (70%)
Frame = -2 / -3
Query: 271 FLTVPRTV*PFSRRRLTSQEAMNPPAPVTQT 179
FLTV TV*P RRR TSQE M P PVTQT
Sbjct: 187 FLTVAWTV*PRPRRRRTSQEPMKPLPPVTQT 95
Score = 42.3 bits (86), Expect(3) = 3e-014
Identities = 28/63 (44%), Positives = 31/63 (49%)
Frame = -2 / -3
Query: 646 ATVLA*QYQFWVFLQYSRSLQQVSSTGLLGSR*GFMYTVPMEDVNTTRFTPASSAAAIT* 467
A+VL YQ FL S S Q+ SST L GF +D TTR TP S AA T
Sbjct: 580 ASVLETLYQS*SFLSCSMSAQESSSTTLSAGHAGFGTMAVCDDTMTTRPTPQSFAARRTL 401
Query: 466 RVP 458
VP
Sbjct: 400 SVP 392
Score = 39.6 bits (80), Expect(3) = 3e-029
Identities = 17/47 (36%), Positives = 22/47 (46%)
Frame = +3 / +3
Query: 279 DPKNDHLRALDGXXXXXXXXXXXXXXPQSLAEAFSGCDGVFHAASPV 419
+ + HL+A+DG P S+ A G GVFH ASPV
Sbjct: 198 ESETKHLQAMDGANSRLRLFQMDLLEPASIRPAVEGARGVFHVASPV 338
Score = 38.2 bits (77), Expect = 0.32
Identities = 16/27 (59%), Positives = 17/27 (62%)
Frame = +2 / +2
Query: 200 RVHCLLARQAPPGEGLHSPRHGQEPCG 280
R+H LLAR P LH PRH QEP G
Sbjct: 116 RLHRLLARPPPSRSRLHRPRHRQEPPG 196
Score = 29.5 bits (58), Expect(3) = 3e-014
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = -2 / -3
Query: 421 VTGEAAWKTPSQPEKASARLCG 356
+TGEA WKTP P A G
Sbjct: 340 MTGEATWKTPRAPSTAGRMEAG 275
>gb|CN137446.1|CN137446 OX1_57_G07.b1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_57_G07_A002 3', mRNA sequence
Length = 532
Score = 116 bits (248), Expect(2) = 4e-029
Identities = 43/67 (64%), Positives = 55/67 (82%)
Frame = +3 / +1
Query: 858 YEAPHAHGRYICAESTLHRGDLCRVLAKLFPEYPVPTKCKDQVNPPVVGYKFTNQRLKDL 1037
+E+P A GRY+CAE LHR D+ R+LAKLFPEYPVPT+C D+VNP YKF+NQ+L+DL
Sbjct: 1 FESPAASGRYLCAERVLHREDVVRILAKLFPEYPVPTRCSDEVNPRKQPYKFSNQKLRDL 180
Query: 1038 GMDFVPV 1058
G++F PV
Sbjct: 181 GLEFRPV 201
Score = 77.1 bits (162), Expect(2) = 3e-014
Identities = 39/66 (59%), Positives = 39/66 (59%)
Frame = -2 / -3
Query: 1057 TGTKSIPRSLSLWLVNLYPTTGGLTWSLHLVGTGYSGKSLARTRQRSPRCRVLSAQM*RP 878
TG S PRS S W NLY G T S HLVGTGYSGKSLAR R S R R SA RP
Sbjct: 200 TGRNSNPRSRSFWFENLYGCFRGFTSSEHLVGTGYSGKSLARMRTTSSRWRTRSAHRYRP 21
Query: 877 CAWGAS 860
A G S
Sbjct: 20 DAAGLS 3
Score = 70.7 bits (148), Expect = 5e-011
Identities = 39/67 (58%), Positives = 45/67 (67%)
Frame = -1 / -2
Query: 1061 ADRHEVHPQILEPLVGELVSYHRRVNLVLALGGYGVLREELGEDAAEVAAVQGALGADVA 882
A R E+ Q+ E LV ELV RV+LV A GG GVL EELGEDA +V AV+ ALGA V+
Sbjct: 204 AHRPELQSQVPELLVRELVRLLPRVHLVGAPGGDGVLGEELGEDADDVLAVEDALGAQVS 25
Query: 881 AVRVGRL 861
A R G L
Sbjct: 24 AGRGGAL 4
Score = 40.5 bits (82), Expect = 0.066
Identities = 18/35 (51%), Positives = 22/35 (62%)
Frame = +2 / +3
Query: 953 VPRTHQVQGPG*PSGGRIQVHQPEAQGSGDGLRAG 1057
VPR HQV G P+ +QV +PEA G G G+ AG
Sbjct: 96 VPRPHQVLRRGEPAEAAVQVLEPEAPGPGIGVPAG 200
Score = 34.1 bits (68), Expect(2) = 4e-029
Identities = 14/19 (73%), Positives = 16/19 (84%)
Frame = +2 / +1
Query: 1061 QCLYETVTSLQEKGMLPVL 1117
Q LY+TV +LQEKG LPVL
Sbjct: 205 QSLYDTVKNLQEKGHLPVL 261
Score = 23.1 bits (44), Expect(2) = 3e-014
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = -3 / -3
Query: 1116 STGSMPFSWRLVTVS* 1069
STG PFS R TVS*
Sbjct: 260 STGRWPFS*RFFTVS* 213
>gb|BM318321.1|BM318321 PI1_77_C02.g9_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 514
Score = 116 bits (248), Expect(2) = 4e-029
Identities = 43/67 (64%), Positives = 55/67 (82%)
Frame = +3 / +1
Query: 858 YEAPHAHGRYICAESTLHRGDLCRVLAKLFPEYPVPTKCKDQVNPPVVGYKFTNQRLKDL 1037
+E+P A GRY+CAE LHR D+ R+LAKLFPEYPVPT+C D+VNP YKF+NQ+L+DL
Sbjct: 1 FESPAASGRYLCAERVLHREDVVRILAKLFPEYPVPTRCSDEVNPRKQPYKFSNQKLRDL 180
Query: 1038 GMDFVPV 1058
G++F PV
Sbjct: 181 GLEFRPV 201
Score = 76.7 bits (161), Expect(2) = 5e-014
Identities = 39/66 (59%), Positives = 39/66 (59%)
Frame = -2 / -3
Query: 1057 TGTKSIPRSLSLWLVNLYPTTGGLTWSLHLVGTGYSGKSLARTRQRSPRCRVLSAQM*RP 878
TG S PRS S W NLY G T S HLVGTGYSGKSLAR R S R R SA RP
Sbjct: 200 TGRNSNPRSRSFWFENLYGCFRGFTSSEHLVGTGYSGKSLARMRTTSSRWRTRSAXRYRP 21
Query: 877 CAWGAS 860
A G S
Sbjct: 20 DAAGLS 3
Score = 70.3 bits (147), Expect = 7e-011
Identities = 39/67 (58%), Positives = 45/67 (67%)
Frame = -1 / -2
Query: 1061 ADRHEVHPQILEPLVGELVSYHRRVNLVLALGGYGVLREELGEDAAEVAAVQGALGADVA 882
A R E+ Q+ E LV ELV RV+LV A GG GVL EELGEDA +V AV+ ALGA V+
Sbjct: 204 AHRPELQSQVPELLVRELVRLLPRVHLVGAPGGDGVLGEELGEDADDVLAVEDALGAXVS 25
Query: 881 AVRVGRL 861
A R G L
Sbjct: 24 AGRGGAL 4
Score = 40.5 bits (82), Expect = 0.066
Identities = 18/35 (51%), Positives = 22/35 (62%)
Frame = +2 / +3
Query: 953 VPRTHQVQGPG*PSGGRIQVHQPEAQGSGDGLRAG 1057
VPR HQV G P+ +QV +PEA G G G+ AG
Sbjct: 96 VPRPHQVLRRGEPAEAAVQVLEPEAPGPGIGVPAG 200
Score = 34.1 bits (68), Expect(2) = 4e-029
Identities = 14/19 (73%), Positives = 16/19 (84%)
Frame = +2 / +1
Query: 1061 QCLYETVTSLQEKGMLPVL 1117
Q LY+TV +LQEKG LPVL
Sbjct: 205 QSLYDTVKNLQEKGHLPVL 261
Score = 23.1 bits (44), Expect(2) = 5e-014
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = -3 / -3
Query: 1116 STGSMPFSWRLVTVS* 1069
STG PFS R TVS*
Sbjct: 260 STGRWPFS*RFFTVS* 213
>gb|BG048617.1|BG048617 OV1_14_H08.b1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA
sequence
Length = 482
Score = 73.9 bits (155), Expect(3) = 6e-029
Identities = 32/58 (55%), Positives = 35/58 (60%)
Frame = +3 / +1
Query: 246 YTVRGTVRNPVDPKNDHLRALDGXXXXXXXXXXXXXXPQSLAEAFSGCDGVFHAASPV 419
Y VRGTVR+P DPKN HL ALDG S+A A +GCDGVFH ASPV
Sbjct: 106 YLVRGTVRDPSDPKNAHLMALDGAGERLRLFKADLLDRASVAAAVAGCDGVFHVASPV 279
Score = 52.8 bits (109), Expect(3) = 6e-029
Identities = 19/24 (79%), Positives = 23/24 (95%)
Frame = +3 / +1
Query: 174 RTVCVTGAGGFIASWLVKRLLEKG 245
+TVCVTGAGGF+ASWLV+RLL +G
Sbjct: 31 KTVCVTGAGGFVASWLVQRLLSRG 102
Score = 49.6 bits (102), Expect(2) = 4e-011
Identities = 26/54 (48%), Positives = 32/54 (59%)
Frame = -1 / -3
Query: 419 DRGGGVEDAVTAGEGLGKALWVQQVGAEEDETVDGAVKGPQVVVLWIHRVPDRA 258
D G VEDAV A G G A VQQV E+ + + GAV+ QV VL I R+ + A
Sbjct: 279 DGAGDVEDAVAASNGGGDAGTVQQVSLEQPQALPGAVQRHQVRVLGITRIANSA 118
Score = 40.9 bits (83), Expect(3) = 6e-029
Identities = 18/47 (38%), Positives = 27/47 (57%)
Frame = +3 / +1
Query: 438 MIEPAIRGTRYVMAAADDAGVKRVVFTSSIGTVYMNPYRDPSKPVDD 578
++ PA+ GT+ ++ A+ A V+RVV SS+ V NP P V D
Sbjct: 313 IMAPAVTGTQNMLEASHAANVRRVVVVSSVAAVIANPTSIPDDAVAD 453
Score = 40.0 bits (81), Expect(2) = 4e-011
Identities = 16/23 (69%), Positives = 16/23 (69%)
Frame = -2 / -1
Query: 244 PFSRRRLTSQEAMNPPAPVTQTV 176
P RRR TS EA PPAPVT TV
Sbjct: 101 PLERRRCTSHEATKPPAPVTHTV 33
Score = 33.1 bits (66), Expect(2) = 0.029
Identities = 13/19 (68%), Positives = 14/19 (73%)
Frame = -2 / -1
Query: 418 TGEAAWKTPSQPEKASARL 362
TG A WKTPSQP A+A L
Sbjct: 278 TGLATWKTPSQPATAAATL 222
Score = 26.3 bits (51), Expect(2) = 0.029
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = -1 / -3
Query: 254 DCVALLQEALDEPGGNEPSSSGHAN 180
+ VA +EAL EP G+E + + HA+
Sbjct: 111 EVVASGEEALHEPRGDEAAGARHAH 37
>gb|CD225805.1|CD225805 CCC1_41_H04.g1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_41_H04_A007 5', mRNA sequence
Length = 659
Score = 73.9 bits (155), Expect(3) = 2e-028
Identities = 27/42 (64%), Positives = 35/42 (83%)
Frame = +3 / +3
Query: 162 SGQGRTVCVTGAGGFIASWLVKRLLEKGYTVRGTVRNPVDPK 287
+G G+ VCVTGA G+IASW+V+ LL++GYTVR TVR+ DPK
Sbjct: 135 TGAGKVVCVTGASGYIASWIVRLLLDRGYTVRATVRDTADPK 260
Score = 56.1 bits (116), Expect(3) = 2e-028
Identities = 22/55 (40%), Positives = 32/55 (58%)
Frame = +3 / +3
Query: 501 KRVVFTSSIGTVYMNPYRDPSKPVDDTCWSDLEYCKNTQNWYCYAKTVAEQGAWE 665
K V+ +S Y R P VD+T ++D + C+ TQ WY +KT+AEQ AW+
Sbjct: 492 KVVITSSMAAVSYNEKPRTPEVTVDETWFTDPQICEKTQQWYVLSKTLAEQAAWK 656
Score = 54.2 bits (112), Expect(3) = 5e-009
Identities = 26/42 (61%), Positives = 27/42 (64%)
Frame = -2 / -2
Query: 289 FFGSTGFLTVPRTV*PFSRRRLTSQEAMNPPAPVTQTVRPCP 164
FFGS TV RTV*P SR LT Q+AM P APVT T P P
Sbjct: 262 FFGSAVSRTVARTV*PRSRSSLTIQDAMYPDAPVTHTTFPAP 137
Score = 38.2 bits (77), Expect(2) = 2e-004
Identities = 17/57 (29%), Positives = 28/57 (49%)
Frame = +3 / +3
Query: 417 VTDDPEMMIEPAIRGTRYVMAAADDAGVKRVVFTSSIGTVYMNPYRDPSKPVDDTCW 587
V D +++PA++GT V+ + A + +VV TSS+ V N + D W
Sbjct: 405 VKDPKAELLDPAVKGTLNVLGSCKKASITKVVITSSMAAVSYNEKPRTPEVTVDETW 575
Score = 36.3 bits (73), Expect(3) = 2e-028
Identities = 18/44 (40%), Positives = 18/44 (40%)
Frame = +3 / +3
Query: 285 KNDHLRALDGXXXXXXXXXXXXXXPQSLAEAFSGCDGVFHAASP 416
K HL ALDG S A GCD VFH ASP
Sbjct: 261 KTLHLTALDGAKDRLHLFKASLLEEGSFDAAVHGCDTVFHTASP 392
Score = 35.9 bits (72), Expect = 1.6
Identities = 15/36 (41%), Positives = 22/36 (61%)
Frame = -1 / -1
Query: 287 LWIHRVPDRAADCVALLQEALDEPGGNEPSSSGHAN 180
LW+ VP AD VA ++E D+PG + P +G A+
Sbjct: 260 LWVSGVPHGGADGVAAVEEQPDDPGRDVP*CAGDAH 153
Score = 31.8 bits (63), Expect(2) = 2e-004
Identities = 13/21 (61%), Positives = 14/21 (66%)
Frame = +2 / +2
Query: 200 RVHCLLARQAPPGEGLHSPRH 262
RVH +L RQA P LH PRH
Sbjct: 173 RVHRVLDRQAAPRPRLHRPRH 235
Score = 27.6 bits (54), Expect(3) = 5e-009
Identities = 15/30 (50%), Positives = 17/30 (56%)
Frame = -2 / -2
Query: 658 APCSATVLA*QYQFWVFLQYSRSLQQVSST 569
A CSA+VL Y VF Q S+ VSST
Sbjct: 649 AACSASVLDKTYHC*VFSQICGSVNHVSST 560
Score = 22.6 bits (43), Expect(3) = 5e-009
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = -2 / -2
Query: 415 GEAAWKTPSQPEKASAR 365
GEA W T S P A+++
Sbjct: 391 GEAVWNTVSHP*TAASK 341
>gb|CW456492.1|CW456492 fsbb001f201n16k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f201n16, DNA
sequence
Length = 599
Score = 92.7 bits (196), Expect(2) = 4e-028
Identities = 37/62 (59%), Positives = 49/62 (79%)
Frame = +3 / +3
Query: 432 EMMIEPAIRGTRYVMAAADDAGVKRVVFTSSIGTVYMNPYRDPSKPVDDTCWSDLEYCKN 611
E +IEP I GTR V+ AA DAGV+R+V +S+IGT+YM+P RDP + D+ WSDLEYCK+
Sbjct: 294 EEIIEPIIVGTRNVVEAAADAGVRRLVLSSTIGTMYMDPRRDPDAALGDSSWSDLEYCKS 473
Query: 612 TQ 617
T+
Sbjct: 474 TK 479
Score = 62.9 bits (131), Expect(2) = 3e-014
Identities = 31/52 (59%), Positives = 36/52 (69%)
Frame = -2 / -2
Query: 613 VFLQYSRSLQQVSSTGLLGSR*GFMYTVPMEDVNTTRFTPASSAAAIT*RVP 458
V LQYSRSLQ S + GSR G MY VPM + +T R TPAS+AA+ T RVP
Sbjct: 475 VLLQYSRSLQLESPSAASGSRRGSMYMVPMVEDSTRRRTPASAAASTTFRVP 320
Score = 54.7 bits (113), Expect(2) = 4e-028
Identities = 24/50 (48%), Positives = 26/50 (52%)
Frame = +3 / +3
Query: 282 PKNDHLRALDGXXXXXXXXXXXXXXPQSLAEAFSGCDGVFHAASPVTDDP 431
PKN HL ALDG SL AF GCDGV H ASP+ D+P
Sbjct: 27 PKNAHLWALDGAAERLTMLQVDLLDRASLRAAFRGCDGVIHTASPMHDNP 176
Score = 40.5 bits (82), Expect(2) = 3e-014
Identities = 22/48 (45%), Positives = 29/48 (60%)
Frame = -1 / -1
Query: 428 VIGDRGGGVEDAVTAGEGLGKALWVQQVGAEEDETVDGAVKGPQVVVL 285
V+ R GGV+DAV A E +A V+QV + E + AV+ PQV VL
Sbjct: 173 VVVHRRGGVDDAVAAAECGAEAGTVEQVHLQHGEALRRAVERPQVRVL 30
Score = 34.1 bits (68), Expect(2) = 0.49
Identities = 16/48 (33%), Positives = 18/48 (37%)
Frame = -2 / -2
Query: 415 GEAAWKTPSQPEKASARLCGXXXXXXXXXXXXXXXXXXXRWSFFGSTG 272
GEA W TPSQP A+ RL R +F G G
Sbjct: 160 GEAVWMTPSQPRNAARRLARSSRSTCSMVRRSAAPSSAHRCAFLGHLG 17
Score = 24.0 bits (46), Expect(2) = 0.49
Identities = 8/10 (80%), Positives = 9/10 (90%)
Frame = -3 / -3
Query: 612 CSCNTRGRSS 583
CSC+ RGRSS
Sbjct: 474 CSCSIRGRSS 445
>gb|CD228671.1|CD228671 CCC1_9_E11.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_9_E11_A007 3', mRNA sequence
Length = 535
Score = 112 bits (240), Expect(2) = 5e-028
Identities = 42/65 (64%), Positives = 53/65 (81%)
Frame = +3 / +3
Query: 864 APHAHGRYICAESTLHRGDLCRVLAKLFPEYPVPTKCKDQVNPPVVGYKFTNQRLKDLGM 1043
+P A GRY+CAE LHR D+ R+LAKLFPEYPVPT+C D+VNP YKF+NQ+L+DLG+
Sbjct: 3 SPAASGRYLCAERVLHREDVVRILAKLFPEYPVPTRCSDEVNPRKQPYKFSNQKLRDLGL 182
Query: 1044 DFVPV 1058
+F PV
Sbjct: 183 EFRPV 197
Score = 78.0 bits (164), Expect(2) = 2e-014
Identities = 39/64 (60%), Positives = 39/64 (60%)
Frame = -2 / -1
Query: 1057 TGTKSIPRSLSLWLVNLYPTTGGLTWSLHLVGTGYSGKSLARTRQRSPRCRVLSAQM*RP 878
TG S PRS S W NLY G T S HLVGTGYSGKSLAR R S R R SAQ RP
Sbjct: 196 TGRNSNPRSRSFWFENLYGCFRGFTSSEHLVGTGYSGKSLARMRTTSSRWRTRSAQRYRP 17
Query: 877 CAWG 866
A G
Sbjct: 16 DAAG 5
Score = 70.3 bits (147), Expect = 7e-011
Identities = 38/65 (58%), Positives = 45/65 (69%)
Frame = -1 / -3
Query: 1061 ADRHEVHPQILEPLVGELVSYHRRVNLVLALGGYGVLREELGEDAAEVAAVQGALGADVA 882
A R E+ Q+ E LV ELV RV+LV A GG GVL EELGEDA +V AV+ ALGA+V+
Sbjct: 200 AHRPELQSQVPELLVRELVRLLPRVHLVGAPGGDGVLGEELGEDADDVLAVEDALGAEVS 21
Query: 881 AVRVG 867
A R G
Sbjct: 20 AGRGG 6
Score = 40.5 bits (82), Expect = 0.066
Identities = 18/35 (51%), Positives = 22/35 (62%)
Frame = +2 / +2
Query: 953 VPRTHQVQGPG*PSGGRIQVHQPEAQGSGDGLRAG 1057
VPR HQV G P+ +QV +PEA G G G+ AG
Sbjct: 92 VPRPHQVLRRGEPAEAAVQVLEPEAPGPGIGVPAG 196
Score = 34.1 bits (68), Expect(2) = 5e-028
Identities = 14/19 (73%), Positives = 16/19 (84%)
Frame = +2 / +3
Query: 1061 QCLYETVTSLQEKGMLPVL 1117
Q LY+TV +LQEKG LPVL
Sbjct: 201 QSLYDTVKNLQEKGHLPVL 257
Score = 23.1 bits (44), Expect(2) = 2e-014
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = -3 / -1
Query: 1116 STGSMPFSWRLVTVS* 1069
STG PFS R TVS*
Sbjct: 256 STGRWPFS*RFFTVS* 209
>gb|CN124236.1|CN124236 RHOH1_3_B09.g1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_3_B09_A002 5', mRNA sequence
Length = 566
Score = 50.1 bits (103), Expect(5) = 7e-028
Identities = 19/24 (79%), Positives = 22/24 (91%)
Frame = +3 / +1
Query: 174 RTVCVTGAGGFIASWLVKRLLEKG 245
++VCVTGAGGFIASWLVK LL +G
Sbjct: 115 KSVCVTGAGGFIASWLVKLLLSRG 186
Score = 44.6 bits (91), Expect(5) = 7e-028
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = +3 / +2
Query: 498 VKRVVFTSSIGTVYMNPYRDPSKPVDDTCWSDLEYC 605
+ +V SS+ ++ NPY K D+ CWSD +YC
Sbjct: 458 LSELVVVSSVAAIFSNPYWPKGKAFDEDCWSDEDYC 565
Score = 40.5 bits (82), Expect(5) = 7e-028
Identities = 16/23 (69%), Positives = 19/23 (82%)
Frame = +3 / +1
Query: 246 YTVRGTVRNPVDPKNDHLRALDG 314
YTVRGTVR+P KN HL+AL+G
Sbjct: 190 YTVRGTVRDPGASKNAHLKALEG 258
Score = 36.8 bits (74), Expect(5) = 7e-028
Identities = 13/19 (68%), Positives = 16/19 (84%)
Frame = +3 / +1
Query: 363 SLAEAFSGCDGVFHAASPV 419
S+A A +GC+GVFH ASPV
Sbjct: 307 SVASAIAGCEGVFHVASPV 363
Score = 36.3 bits (73), Expect(2) = 9e-005
Identities = 14/23 (60%), Positives = 16/23 (69%)
Frame = -2 / -1
Query: 244 PFSRRRLTSQEAMNPPAPVTQTV 176
P RR TS +AM PPAPVT T+
Sbjct: 185 PRERRSFTSHDAMKPPAPVTHTL 117
Score = 31.8 bits (63), Expect(2) = 9e-005
Identities = 13/19 (68%), Positives = 13/19 (68%)
Frame = -2 / -1
Query: 418 TGEAAWKTPSQPEKASARL 362
TG A WKTPSQP A A L
Sbjct: 362 TGLATWKTPSQPAIADATL 306
Score = 26.3 bits (51), Expect(5) = 7e-028
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +3 / +1
Query: 438 MIEPAIRGTRYVMAAADDAGVKRV 509
+I PA+ GT V+ A +A VKRV
Sbjct: 397 VIGPAVLGTTNVLKACYEAKVKRV 468
>gb|BZ367897.1|BZ367897 id07b12.g1 WGS-SbicolorF (JM107 adapted methyl filtered) Sorghum
bicolor genomic clone id07b12 5', DNA sequence
Length = 708
Score = 68.9 bits (144), Expect(3) = 4e-027
Identities = 26/36 (72%), Positives = 30/36 (83%)
Frame = +3 / -2
Query: 168 QGRTVCVTGAGGFIASWLVKRLLEKGYTVRGTVRNP 275
Q + VCVTGAGGFI SW+VK LL++GY VRGT RNP
Sbjct: 584 QQQLVCVTGAGGFIGSWVVKELLQRGYLVRGTARNP 477
Score = 58.8 bits (122), Expect(3) = 1e-018
Identities = 28/49 (57%), Positives = 34/49 (69%)
Frame = -1 / +3
Query: 431 RVIGDRGGGVEDAVTAGEGLGKALWVQQVGAEEDETVDGAVKGPQVVVL 285
RV+GDRGG VEDAV A EG + V+ VGA + ET+ GAV+ QV VL
Sbjct: 174 RVVGDRGGDVEDAVAADEGGAEGGAVEDVGAAQGETLLGAVQSQQVRVL 320
Score = 53.8 bits (111), Expect(3) = 4e-027
Identities = 24/49 (48%), Positives = 26/49 (53%)
Frame = +3 / -2
Query: 285 KNDHLRALDGXXXXXXXXXXXXXXPQSLAEAFSGCDGVFHAASPVTDDP 431
KN HL ALDG SL AF GC GVFH ASPV++DP
Sbjct: 320 KNAHLLALDGAKERLTLCRADVLDSASLRAAFVGCHGVFHVASPVSNDP 174
Score = 45.5 bits (93), Expect(3) = 1e-018
Identities = 22/38 (57%), Positives = 23/38 (60%)
Frame = -2 / +1
Query: 280 STGFLTVPRTV*PFSRRRLTSQEAMNPPAPVTQTVRPC 167
S GFL VP T *P LT+ E M PPAPVTQT C
Sbjct: 472 SPGFLAVPLTR*PRWSSSLTTHEPMKPPAPVTQTSCCC 585
Score = 44.1 bits (90), Expect(3) = 4e-027
Identities = 18/32 (56%), Positives = 24/32 (75%)
Frame = +3 / -1
Query: 429 PEMMIEPAIRGTRYVMAAADDAGVKRVVFTSS 524
P+ ++ A+ GTR V+ AA D GV+RVVFTSS
Sbjct: 99 PQELVPVAVEGTRNVITAAADEGVRRVVFTSS 4
Score = 35.0 bits (70), Expect(2) = 4e-004
Identities = 13/18 (72%), Positives = 14/18 (77%)
Frame = -2 / +1
Query: 418 TGEAAWKTPSQPEKASAR 365
TGEA WKTP QP KA+ R
Sbjct: 187 TGEATWKTPWQPTKAARR 240
Score = 34.1 bits (68), Expect(2) = 4e-004
Identities = 14/32 (43%), Positives = 21/32 (65%)
Frame = -1 / +3
Query: 275 RVPDRAADCVALLQEALDEPGGNEPSSSGHAN 180
RVP + D VA L++ LD P +E + +GHA+
Sbjct: 477 RVPCSSPDKVAALEQLLDHPRTDEAAGAGHAD 572
Score = 33.6 bits (67), Expect(3) = 1e-018
Identities = 14/22 (63%), Positives = 18/22 (81%)
Frame = -2 / +2
Query: 523 EDVNTTRFTPASSAAAIT*RVP 458
E+V TTR TP+S+AA +T RVP
Sbjct: 5 EEVKTTRRTPSSAAAVMTFRVP 70
>gb|CW436324.1|CW436324 fsbb001f152o03k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f152o03, DNA
sequence
Length = 634
Score = 123 bits (264), Expect = 5e-027
Identities = 50/62 (80%), Positives = 53/62 (85%)
Frame = +3 / +2
Query: 432 EMMIEPAIRGTRYVMAAADDAGVKRVVFTSSIGTVYMNPYRDPSKPVDDTCWSDLEYCKN 611
EMMIEPAIRGT+YVM D GVKRVV TSSIGTV MNPYR+P+KP DDT WSDLEYCKN
Sbjct: 56 EMMIEPAIRGTQYVMTGGGDTGVKRVVVTSSIGTVDMNPYREPNKPGDDTWWSDLEYCKN 235
Query: 612 TQ 617
TQ
Sbjct: 236 TQ 241
Score = 89.5 bits (189), Expect = 1e-016
Identities = 43/71 (60%), Positives = 43/71 (60%)
Frame = -2 / -2
Query: 613 VFLQYSRSLQQVSSTGLLGSR*GFMYTVPMEDVNTTRFTPASSAAAIT*RVPRXXXXXXX 434
VFLQYSRSL QVSS GLLGSR*GFM TVPMEDV TTR TP S IT VPR
Sbjct: 237 VFLQYSRSLHQVSSPGLLGSR*GFMSTVPMEDVTTTRLTPVSPPPVITYCVPRIAGSIII 58
Query: 433 XXXSVTGEAAW 401
E W
Sbjct: 57 SCSICIPECPW 25
Score = 46.9 bits (96), Expect(2) = 2e-009
Identities = 17/23 (73%), Positives = 19/23 (82%)
Frame = -3 / -3
Query: 609 SCNTRGRSSRCRPQACWGHGRGS 541
SCNT+ RS+RCR QACW GRGS
Sbjct: 233 SCNTQDRSTRCRRQACWVPGRGS 165
Score = 36.8 bits (74), Expect(2) = 2e-009
Identities = 15/29 (51%), Positives = 17/29 (58%)
Frame = -1 / -1
Query: 518 REHDALHSGXXXXXXXXXXAPDRWLDHHL 432
R+HDAL +G APD WLDHHL
Sbjct: 142 RDHDALDAGVSPPRHHILCAPDCWLDHHL 56
Score = 35.4 bits (71), Expect = 2.2
Identities = 16/24 (66%), Positives = 18/24 (75%)
Frame = +2 / +1
Query: 542 EPLP*PQQACGRHLLERPRVLQEH 613
EPLP QQA RHL+ER VLQE+
Sbjct: 166 EPLPGTQQAWRRHLVERS*VLQEY 237
>gb|BE359158.1|BE359158 DG1_39_C02.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 548
Score = 101 bits (215), Expect(2) = 6e-027
Identities = 43/86 (50%), Positives = 52/86 (60%)
Frame = +3 / +3
Query: 171 GRTVCVTGAGGFIASWLVKRLLEKGYTVRGTVRNPVDPKNDHLRALDGXXXXXXXXXXXX 350
G TVCVTGAGGFIASWLVK LL +GYTV GTVR+ D K +HL+ L+
Sbjct: 105 GTTVCVTGAGGFIASWLVKLLLSRGYTVHGTVRDLSDEKTNHLKRLENAAGNLRIFKADL 284
Query: 351 XXPQSLAEAFSGCDGVFHAASPVTDD 428
++A A GC GV H A+PV +
Sbjct: 285 LDYDAMAAAVVGCQGVLHVATPVPSE 362
Score = 56.5 bits (117), Expect(3) = 1e-012
Identities = 26/42 (61%), Positives = 26/42 (61%)
Frame = -2 / -2
Query: 295 WSFFGSTGFLTVPRTV*PFSRRRLTSQEAMNPPAPVTQTVRP 170
W F S TVP TV*P R TS EAMNPPAPVT TV P
Sbjct: 229 WFVFSSLRSRTVPCTV*PRESRSFTSHEAMNPPAPVTHTVVP 104
Score = 48.3 bits (99), Expect = 3e-004
Identities = 24/77 (31%), Positives = 41/77 (53%)
Frame = -1 / -1
Query: 410 GGVEDAVTAGEGLGKALWVQQVGAEEDETVDGAVKGPQVVVLWIHRVPDRAADCVALLQE 231
G +E+++ + + VQQ+ E E ++ Q+V L + V D A VA ++
Sbjct: 344 GHMENSLAPDDRSCHGVVVQQISLENPEVSGSILQALQMVRLLVTEVADGAVHGVAAGEQ 165
Query: 230 ALDEPGGNEPSSSGHAN 180
L EP G+EP+ +GHA+
Sbjct: 164 ELHEPRGDEPAGAGHAH 114
Score = 41.8 bits (85), Expect(2) = 6e-027
Identities = 21/54 (38%), Positives = 30/54 (55%)
Frame = +3 / +3
Query: 417 VTDDPEMMIEPAIRGTRYVMAAADDAGVKRVVFTSSIGTVYMNPYRDPSKPVDD 578
+TD M+ PA+ GT V+ AA A V+RVV SS+ V ++P P + D
Sbjct: 366 LTDPELQMLGPAVTGTTNVLKAASAANVQRVVVVSSMVAVEISPKDWPEGKIRD 527
Score = 29.9 bits (59), Expect(3) = 1e-012
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = -2 / -2
Query: 559 GSR*GFMYTVPMEDVNTTRFTPASSAAAIT*RVP 458
G G + T M+D TTR+T A+ AA T VP
Sbjct: 508 GQSLGLISTATMDDTTTTRWTFAAEAALSTLVVP 407
Score = 25.4 bits (49), Expect(3) = 1e-012
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = -2 / -2
Query: 418 TGEAAWKTPSQPEKASA 368
TG A W+TP P A+A
Sbjct: 352 TGVATWRTPWHPTTAAA 302
>gb|CF485730.1|CF485730 POL1_33_F08.b1_A002 Pollen Sorghum bicolor cDNA clone
POL1_33_F08_A002 3', mRNA sequence
Length = 611
Score = 122 bits (261), Expect = 1e-026
Identities = 48/99 (48%), Positives = 64/99 (64%)
Frame = +3 / +3
Query: 762 VMKYLTGSATTYVNAAQAYVHVRDVAEAHVRVYEAPHAHGRYICAESTLHRGDLCRVLAK 941
V Y+ G+ Y NA AYV VRDVA AH+ VYE HGRY+C LH+ + +++ +
Sbjct: 6 VATYMNGTKKAYSNAVGAYVDVRDVALAHIFVYEDLSTHGRYLCIGDMLHQSEFLQMMRE 185
Query: 942 LFPEYPVPTKCKDQVNPPVVGYKFTNQRLKDLGMDFVPV 1058
LFP+YP+ TKCKD+ P + YKF+ QRL LGM F P+
Sbjct: 186 LFPQYPITTKCKDENKPMIKPYKFSTQRLVALGMKFTPL 302
Score = 67.0 bits (140), Expect = 7e-010
Identities = 38/85 (44%), Positives = 45/85 (52%)
Frame = -2 / -2
Query: 1054 GTKSIPRSLSLWLVNLYPTTGGLTWSLHLVGTGYSGKSLARTRQRSPRCRVLSAQM*RPC 875
G IP++ SL + NL GL SLHLV GY GKS + S C + Q RPC
Sbjct: 298 GVNFIPKATSLCVENL*GLIIGLFSSLHLVVIGYCGKSSLII*RNSD*CSMSPMQRYRPC 119
Query: 874 AWGASYTRTCASATSLTCTYACAAF 800
+SYT+ A ATS T TYA AF
Sbjct: 118 VLKSSYTKIWARATSRTSTYAPTAF 44
Score = 40.5 bits (82), Expect = 0.066
Identities = 24/74 (32%), Positives = 35/74 (47%)
Frame = -1 / -1
Query: 1055 RHEVHPQILEPLVGELVSYHRRVNLVLALGGYGVLREELGEDAAEVAAVQGALGADVAAV 876
R E+H Q EPL GELV + +LA GG VL EEL + + A+V +
Sbjct: 299 RSELHTQSNEPLCGELVRLDHWLVFILAFGGDRVLWEELSHHLKKFRLM*HVTYAEVPPM 120
Query: 875 RVGRLVHPDVRLGH 834
+H ++ G+
Sbjct: 119 CAQIFIHENMGKGN 78
>gb|CD206423.1|CD206423 HS1_22_G03.g1_A012 Heat-shocked seedlings Sorghum bicolor cDNA
clone HS1_22_G03_A012 5', mRNA sequence
Length = 511
Score = 101 bits (215), Expect(2) = 2e-026
Identities = 43/86 (50%), Positives = 52/86 (60%)
Frame = +3 / +1
Query: 171 GRTVCVTGAGGFIASWLVKRLLEKGYTVRGTVRNPVDPKNDHLRALDGXXXXXXXXXXXX 350
G TVCVTGAGGFIASWLVK LL +GYTV GTVR+ D K +HL+ L+
Sbjct: 112 GTTVCVTGAGGFIASWLVKLLLSRGYTVHGTVRDLSDEKTNHLKRLENAAGNLRIFKADL 291
Query: 351 XXPQSLAEAFSGCDGVFHAASPVTDD 428
++A A GC GV H A+PV +
Sbjct: 292 LDYDAMAAAVVGCQGVLHVATPVPSE 369
Score = 56.5 bits (117), Expect(3) = 2e-012
Identities = 26/42 (61%), Positives = 26/42 (61%)
Frame = -2 / -3
Query: 295 WSFFGSTGFLTVPRTV*PFSRRRLTSQEAMNPPAPVTQTVRP 170
W F S TVP TV*P R TS EAMNPPAPVT TV P
Sbjct: 236 WFVFSSLRSRTVPCTV*PRESRSFTSHEAMNPPAPVTHTVVP 111
Score = 48.3 bits (99), Expect = 3e-004
Identities = 24/77 (31%), Positives = 41/77 (53%)
Frame = -1 / -2
Query: 410 GGVEDAVTAGEGLGKALWVQQVGAEEDETVDGAVKGPQVVVLWIHRVPDRAADCVALLQE 231
G +E+++ + + VQQ+ E E ++ Q+V L + V D A VA ++
Sbjct: 351 GHMENSLAPDDRSCHGVVVQQISLENPEVSGSILQALQMVRLLVTEVADGAVHGVAAGEQ 172
Query: 230 ALDEPGGNEPSSSGHAN 180
L EP G+EP+ +GHA+
Sbjct: 171 ELHEPRGDEPAGAGHAH 121
Score = 40.5 bits (82), Expect(2) = 2e-026
Identities = 19/44 (43%), Positives = 27/44 (61%)
Frame = +3 / +1
Query: 417 VTDDPEMMIEPAIRGTRYVMAAADDAGVKRVVFTSSIGTVYMNP 548
+TD M+ PA+ GT V+ AA A V+RVV SS+ V ++P
Sbjct: 373 LTDPELQMLGPAVTGTTNVLKAASAANVQRVVVVSSMVAVEISP 504
Score = 29.5 bits (58), Expect(3) = 2e-012
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = -2 / -3
Query: 547 GFMYTVPMEDVNTTRFTPASSAAAIT*RVP 458
G + T M+D TTR+T A+ AA T VP
Sbjct: 503 GLISTATMDDTTTTRWTFAAEAALSTLVVP 414
Score = 25.4 bits (49), Expect(3) = 2e-012
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = -2 / -3
Query: 418 TGEAAWKTPSQPEKASA 368
TG A W+TP P A+A
Sbjct: 359 TGVATWRTPWHPTTAAA 309
>gb|CD210805.1|CD210805 HS1_49_C07.g1_A012 Heat-shocked seedlings Sorghum bicolor cDNA
clone HS1_49_C07_A012 5', mRNA sequence
Length = 607
Score = 122 bits (260), Expect = 2e-026
Identities = 53/92 (57%), Positives = 58/92 (63%)
Frame = +3 / +2
Query: 180 VCVTGAGGFIASWLVKRLLEKGYTVRGTVRNPVDPKNDHLRALDGXXXXXXXXXXXXXXP 359
VCVTGAGGFI SW+VK LL +GY VRGT R DPKN HL ALDG
Sbjct: 332 VCVTGAGGFIGSWIVKILLARGYAVRGTSRRADDPKNAHLWALDGAAERLTMLQVDLLDR 511
Query: 360 QSLAEAFSGCDGVFHAASPVTDDPEMMIEPAI 455
SL AF GCDGV H ASP+ D+PE +IEP I
Sbjct: 512 ASLRAAFHGCDGVIHTASPMHDNPEEIIEPII 607
Score = 67.5 bits (141), Expect = 5e-010
Identities = 33/79 (41%), Positives = 38/79 (48%)
Frame = -2 / -2
Query: 415 GEAAWKTPSQPEKASARLCGXXXXXXXXXXXXXXXXXXXRWSFFGSTGFLTVPRTV*PFS 236
GEA W TPSQP A+ RL R +F GS+ VPRT P +
Sbjct: 567 GEAVWMTPSQPWNAARRLARSSRSTCSMVRRSAAPSSAHRCAFLGSSARREVPRTAYPRA 388
Query: 235 RRRLTSQEAMNPPAPVTQT 179
RR LT + M PPAPVT T
Sbjct: 387 RRILTIHDPMKPPAPVTHT 331
Score = 56.5 bits (117), Expect = 1e-006
Identities = 35/92 (38%), Positives = 49/92 (53%)
Frame = -1 / -1
Query: 455 DRWLDHHLRVIGDRGGGVEDAVTAGEGLGKALWVQQVGAEEDETVDGAVKGPQVVVLWIH 276
D LD L ++ R GGV+DAV A E +A V+QV + E + AV+ PQV VL +
Sbjct: 607 DNRLDDLLGIVVHRRGGVDDAVAAVECGAEAGTVEQVHLQHGEALRCAVERPQVRVLRVI 428
Query: 275 RVPDRAADCVALLQEALDEPGGNEPSSSGHAN 180
A D V +E LD P +E + +G A+
Sbjct: 427 CAAGGAPDGVPAGEEDLDNPRPDEAAGAGDAH 332
>gb|CF480908.1|CF480908 POL1_68_F11.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_68_F11_A002 5', mRNA sequence
Length = 773
Score = 69.8 bits (146), Expect(3) = 3e-026
Identities = 25/39 (64%), Positives = 33/39 (84%)
Frame = +3 / +2
Query: 171 GRTVCVTGAGGFIASWLVKRLLEKGYTVRGTVRNPVDPK 287
G+ VCVTGA G+IASW+V+ LL++GYTVR TVR+ DP+
Sbjct: 152 GKVVCVTGASGYIASWIVRLLLDRGYTVRATVRDTADPR 268
Score = 60.6 bits (126), Expect(3) = 3e-026
Identities = 24/61 (39%), Positives = 35/61 (57%)
Frame = +3 / +1
Query: 501 KRVVFTSSIGTVYMNPYRDPSKPVDDTCWSDLEYCKNTQNWYCYAKTVAEQGAWEVARKR 680
K V+ +S Y R P VD+T ++D + C+ TQ WY +KT+AEQ AW+ +R
Sbjct: 463 KVVITSSMAAVSYNEKPRTPEVTVDETWFTDPQICEKTQQWYVLSKTLAEQAAWKFSRDN 642
Query: 681 G 683
G
Sbjct: 643 G 645
Score = 45.5 bits (93), Expect(3) = 2e-006
Identities = 23/38 (60%), Positives = 24/38 (63%)
Frame = -2 / -3
Query: 283 GSTGFLTVPRTV*PFSRRRLTSQEAMNPPAPVTQTVRP 170
GS TV RTV*P SR LT Q+AM P APVT T P
Sbjct: 264 GSAVSRTVARTV*PRSRSSLTIQDAMYPDAPVTHTTFP 151
Score = 38.2 bits (77), Expect(2) = 2e-004
Identities = 17/57 (29%), Positives = 28/57 (49%)
Frame = +3 / +1
Query: 417 VTDDPEMMIEPAIRGTRYVMAAADDAGVKRVVFTSSIGTVYMNPYRDPSKPVDDTCW 587
V D +++PA++GT V+ + A + +VV TSS+ V N + D W
Sbjct: 376 VKDPKAELLDPAVKGTLNVLGSCKKASITKVVITSSMAAVSYNEKPRTPEVTVDETW 546
Score = 34.1 bits (68), Expect = 5.7
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = -1 / -2
Query: 284 WIHRVPDRAADCVALLQEALDEPGGNEPSSSGHAN 180
W+ VP AD VA ++E D+PG + P +G A+
Sbjct: 265 WVSGVPHGGADGVAAVEEQPDDPGRDVP*CAGDAH 161
Score = 31.8 bits (63), Expect(2) = 2e-004
Identities = 13/21 (61%), Positives = 14/21 (66%)
Frame = +2 / +1
Query: 200 RVHCLLARQAPPGEGLHSPRH 262
RVH +L RQA P LH PRH
Sbjct: 181 RVHRVLDRQAAPRPRLHRPRH 243
Score = 28.1 bits (55), Expect(3) = 3e-026
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = +3 / +1
Query: 363 SLAEAFSGCDGVFHAASP 416
S A GCD VFH ASP
Sbjct: 310 SFDAAVHGCDTVFHTASP 363
Score = 27.6 bits (54), Expect(3) = 2e-006
Identities = 15/30 (50%), Positives = 17/30 (56%)
Frame = -2 / -1
Query: 658 APCSATVLA*QYQFWVFLQYSRSLQQVSST 569
A CSA+VL Y VF Q S+ VSST
Sbjct: 620 AACSASVLDKTYHC*VFSQICGSVNHVSST 531
Score = 22.6 bits (43), Expect(3) = 2e-006
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = -2 / -1
Query: 415 GEAAWKTPSQPEKASAR 365
GEA W T S P A+++
Sbjct: 362 GEAVWNTVSHP*TAASK 312
>gb|CD430520.1|CD430520 ETH1_19_A12.b1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_19_A12_A002 3', mRNA sequence
Length = 677
Score = 121 bits (258), Expect = 4e-026
Identities = 49/105 (46%), Positives = 65/105 (61%)
Frame = +3 / +2
Query: 744 NASTDHVMKYLTGSATTYVNAAQAYVHVRDVAEAHVRVYEAPHAHGRYICAESTLHRGDL 923
N + V Y+ G+ Y NA AYV VRDVA AH+ VYE HGRY+C LH+ +
Sbjct: 29 NLTLSAVATYMNGTKKAYSNAVGAYVDVRDVALAHIFVYEDLSTHGRYLCIGDMLHQSEF 208
Query: 924 CRVLAKLFPEYPVPTKCKDQVNPPVVGYKFTNQRLKDLGMDFVPV 1058
+++ +LFP+YP+ TKCKD P + YKF+ QRL LGM F P+
Sbjct: 209 LQMMRELFPQYPITTKCKD*NKPMIKPYKFSTQRLVALGMKFTPL 343
Score = 72.5 bits (152), Expect = 1e-011
Identities = 44/108 (40%), Positives = 52/108 (48%)
Frame = -2 / -3
Query: 1054 GTKSIPRSLSLWLVNLYPTTGGLTWSLHLVGTGYSGKSLARTRQRSPRCRVLSAQM*RPC 875
G IP++ SL + NL GL SLHLV GY GKS + S C + Q RPC
Sbjct: 339 GVNFIPKATSLCVENL*GLIIGLF*SLHLVVIGYCGKSSLII*RNSD*CSMSPMQRYRPC 160
Query: 874 AWGASYTRTCASATSLTCTYACAAFT*VVADPVRYFITWSVLAFTVGC 731
+SYT+ A ATS T TYA AF P T + F VGC
Sbjct: 159 VLKSSYTKIWARATSRTSTYAPTAFEYAFFVPFM*VATADKVKFNVGC 16
Score = 42.3 bits (86), Expect = 0.019
Identities = 25/74 (33%), Positives = 36/74 (48%)
Frame = -1 / -2
Query: 1055 RHEVHPQILEPLVGELVSYHRRVNLVLALGGYGVLREELGEDAAEVAAVQGALGADVAAV 876
R E+H Q EPL GELV + L+LA GG VL EEL + + A+V +
Sbjct: 340 RSELHTQSNEPLCGELVRLDHWLVLILAFGGDRVLWEELSHHLKKFRLM*HVTYAEVPPM 161
Query: 875 RVGRLVHPDVRLGH 834
+H ++ G+
Sbjct: 160 CAQIFIHENMGKGN 119
>gb|CW408711.1|CW408711 fsbb001f102l13k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f102l13, DNA
sequence
Length = 762
Score = 65.2 bits (136), Expect(3) = 6e-026
Identities = 24/32 (75%), Positives = 28/32 (87%)
Frame = +3 / +2
Query: 180 VCVTGAGGFIASWLVKRLLEKGYTVRGTVRNP 275
VCVTGAGGFI SW+VK LL++GY VRGT R+P
Sbjct: 77 VCVTGAGGFIGSWVVKELLQRGYRVRGTARDP 172
Score = 57.9 bits (120), Expect(3) = 2e-017
Identities = 27/49 (55%), Positives = 34/49 (69%)
Frame = -1 / -2
Query: 431 RVIGDRGGGVEDAVTAGEGLGKALWVQQVGAEEDETVDGAVKGPQVVVL 285
RV+GDRGG VEDAV AGEG + V+ VGA + E + GA++ QV VL
Sbjct: 497 RVVGDRGGDVEDAVAAGEGGVEGGAVEDVGAAQGEALLGAIQSQQVGVL 351
Score = 57.4 bits (119), Expect(3) = 6e-026
Identities = 25/51 (49%), Positives = 29/51 (56%)
Frame = +3 / +3
Query: 279 DPKNDHLRALDGXXXXXXXXXXXXXXPQSLAEAFSGCDGVFHAASPVTDDP 431
D KN HL ALDG SL AF+GC+GVFH ASPV++DP
Sbjct: 345 DSKNAHLLALDGAKERLTLCRADVLDRASLHAAFAGCNGVFHVASPVSNDP 497
Score = 44.1 bits (90), Expect(3) = 2e-017
Identities = 21/34 (61%), Positives = 22/34 (64%)
Frame = -2 / -1
Query: 280 STGFLTVPRTV*PFSRRRLTSQEAMNPPAPVTQT 179
S G L VP T *P LT+QE M PPAPVTQT
Sbjct: 177 SPGSLAVPLTR*PRWSNSLTTQEPMKPPAPVTQT 76
Score = 40.5 bits (82), Expect(3) = 6e-026
Identities = 17/31 (54%), Positives = 22/31 (70%)
Frame = +3 / +1
Query: 438 MIEPAIRGTRYVMAAADDAGVKRVVFTSSIG 530
++ A+ GTR V+ AA D G +RVVFTSS G
Sbjct: 637 LVPVAVEGTRNVINAAADEGARRVVFTSSYG 729
Score = 40.0 bits (81), Expect(2) = 1e-005
Identities = 15/32 (46%), Positives = 22/32 (68%)
Frame = -1 / -3
Query: 275 RVPDRAADCVALLQEALDEPGGNEPSSSGHAN 180
RVP + D VA L++ LD PG +E + +GHA+
Sbjct: 172 RVPRSSPDTVATLEQLLDHPGADEAAGAGHAD 77
Score = 34.5 bits (69), Expect(2) = 1e-005
Identities = 13/18 (72%), Positives = 14/18 (77%)
Frame = -2 / -3
Query: 418 TGEAAWKTPSQPEKASAR 365
TGEA WKTP QP KA+ R
Sbjct: 484 TGEATWKTPLQPAKAAWR 431
Score = 32.2 bits (64), Expect(3) = 2e-017
Identities = 14/24 (58%), Positives = 18/24 (75%)
Frame = -2 / -2
Query: 529 PMEDVNTTRFTPASSAAAIT*RVP 458
P E+V TTR P+S+AA +T RVP
Sbjct: 728 P*EEVKTTRRAPSSAAALMTFRVP 657
>emb|AX512962.1| Sequence 7 from Patent WO02063021
Length = 697
Score = 62.5 bits (130), Expect(4) = 2e-025
Identities = 25/60 (41%), Positives = 35/60 (58%)
Frame = +3 / +1
Query: 498 VKRVVFTSSIGTVYMNPYRDPSKPVDDTCWSDLEYCKNTQNWYCYAKTVAEQGAWEVARK 677
+KRVV TSS V + P+ +D+T WS + C+ Q WY AK AE+ AWE A++
Sbjct: 334 LKRVVLTSSSSAVRIRDDDQPNISLDETTWSSVPLCEKMQLWYALAKVFAEKAAWEFAKE 513
Score = 59.7 bits (124), Expect(4) = 2e-025
Identities = 24/30 (80%), Positives = 26/30 (86%)
Frame = +3 / +1
Query: 186 VTGAGGFIASWLVKRLLEKGYTVRGTVRNP 275
VTGA GFIASWL+KRLLE GY V GTVR+P
Sbjct: 1 VTGASGFIASWLIKRLLESGYHVVGTVRDP 90
Score = 36.8 bits (74), Expect(3) = 3e-010
Identities = 18/29 (62%), Positives = 19/29 (65%)
Frame = -2 / -3
Query: 274 GFLTVPRTV*PFSRRRLTSQEAMNPPAPV 188
G LTVP T P S RL SQEA+ P APV
Sbjct: 89 GSLTVPTT*YPDSSSRLISQEAIKPEAPV 3
Score = 36.8 bits (74), Expect(3) = 3e-010
Identities = 21/54 (38%), Positives = 25/54 (46%)
Frame = -2 / -3
Query: 661 HAPCSATVLA*QYQFWVFLQYSRSLQQVSSTGLLGSR*GFMYTVPMEDVNTTRF 500
HA SA A Y +F Q L VSS+ +LG + T EDV TT F
Sbjct: 497 HAAFSANTFARAYHSCIFSQSGTELHVVSSSEILG*SSSLILTADDEDVRTTLF 336
Score = 33.1 bits (66), Expect(4) = 2e-025
Identities = 17/45 (37%), Positives = 17/45 (37%)
Frame = +3 / +1
Query: 285 KNDHLRALDGXXXXXXXXXXXXXXPQSLAEAFSGCDGVFHAASPV 419
K HL L G S A CDGVFH ASPV
Sbjct: 103 KTAHLWKLPGAKERLQIVRADLLEEGSFDNAVMDCDGVFHTASPV 237
Score = 29.9 bits (59), Expect(3) = 3e-010
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = -2 / -3
Query: 418 TGEAAWKTPSQPEKASARL 362
TG+A WKTPSQ A ++L
Sbjct: 236 TGDAVWKTPSQSMTALSKL 180
Score = 29.5 bits (58), Expect(2) = 2.5
Identities = 15/47 (31%), Positives = 25/47 (53%)
Frame = -1 / -2
Query: 434 LRVIGDRGGGVEDAVTAGEGLGKALWVQQVGAEEDETVDGAVKGPQV 294
+R RG VEDA+T + + KA + QQ+ + + + G P+V
Sbjct: 252 IRFSEHRGCSVEDAITVHDSIVKAPFFQQISSHNLQPLFGTR*FPKV 112
Score = 24.4 bits (47), Expect(4) = 2e-025
Identities = 8/14 (57%), Positives = 11/14 (78%)
Frame = +3 / +1
Query: 816 YVHVRDVAEAHVRV 857
YVH+ DVA +H+ V
Sbjct: 655 YVHIDDVATSHILV 696
Score = 23.1 bits (44), Expect(2) = 2.5
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = -1 / -2
Query: 287 LWIHRVPDRAADCVALLQEALDEPGGNEPSSSGH 186
L I V D ++ L++ D+P GN+ S G+
Sbjct: 102 LVISWVSDSPYHMISRLEQPFDKPRGNKA*SPGY 1
>gb|CD430564.1|CD430564 ETH1_19_A12.g1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_19_A12_A002 5', mRNA sequence
Length = 458
Score = 118 bits (252), Expect = 2e-025
Identities = 49/87 (56%), Positives = 58/87 (66%)
Frame = +3 / +2
Query: 180 VCVTGAGGFIASWLVKRLLEKGYTVRGTVRNPVDPKNDHLRALDGXXXXXXXXXXXXXXP 359
V VTGAGGFI SWLVK LL++GY VRGT R+P D KN HLRALDG
Sbjct: 137 VWVTGAGGFIGSWLVKELLQRGYAVRGTARDPEDSKNSHLRALDGAQERLSLYHADVLDY 316
Query: 360 QSLAEAFSGCDGVFHAASPVTDDPEMM 440
SL AFS CDGVF ASP+++DP+++
Sbjct: 317 MSLRRAFSLCDGVFRVASPISNDPDLV 397
Score = 74.8 bits (157), Expect = 3e-012
Identities = 36/85 (42%), Positives = 50/85 (58%)
Frame = -1 / -2
Query: 440 HHLRVIGDRGGGVEDAVTAGEGLGKALWVQQVGAEEDETVDGAVKGPQVVVLWIHRVPDR 261
H +R+IG RGG ED +T EG K VQ + + +++ PQ+ +L + RVP
Sbjct: 397 HKVRIIGYRGGNTEDTIT*AEGTTK*HVVQHISMVQR*PFLSSIQCPQMGILRVLRVPGG 218
Query: 260 AADCVALLQEALDEPGGNEPSSSGH 186
A D VA L++ LD+P NE SSSGH
Sbjct: 217 APDSVAALEQLLDQP*PNEASSSGH 143
Score = 51.0 bits (105), Expect = 4e-005
Identities = 22/39 (56%), Positives = 24/39 (61%)
Frame = -2 / -3
Query: 295 WSFFGSTGFLTVPRTV*PFSRRRLTSQEAMNPPAPVTQT 179
W FF S+G L VP T *P LTS + M PPAPVT T
Sbjct: 252 WEFFESSGSLAVPLTA*PRWSSSLTSHDPMKPPAPVTHT 136
>gb|CL158052.1|CL158052 104_346_10803269_114_31375_245 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10803269, DNA
sequence
Length = 517
Score = 94.1 bits (199), Expect(2) = 2e-024
Identities = 36/60 (60%), Positives = 47/60 (78%)
Frame = +3 / +1
Query: 438 MIEPAIRGTRYVMAAADDAGVKRVVFTSSIGTVYMNPYRDPSKPVDDTCWSDLEYCKNTQ 617
++ AI GT+ VM AA D GV+RVVFTSS G V+MNP R+P + VD++CWSDL++CK TQ
Sbjct: 40 LVPVAIEGTKNVMNAAADMGVQRVVFTSSYGAVHMNPNRNPDRTVDESCWSDLDFCKQTQ 219
Score = 62.5 bits (130), Expect = 2e-008
Identities = 32/52 (61%), Positives = 37/52 (71%)
Frame = -2 / -3
Query: 613 VFLQYSRSLQQVSSTGLLGSR*GFMYTVPMEDVNTTRFTPASSAAAIT*RVP 458
V LQ SRSLQQ+SST G GFM+T P ++VNTTR TP S+AA IT VP
Sbjct: 215 VCLQKSRSLQQLSSTVRSGFLLGFMWTAP*DEVNTTRCTPMSAAAFITFFVP 60
Score = 43.7 bits (89), Expect(2) = 2e-024
Identities = 19/31 (61%), Positives = 20/31 (64%)
Frame = +3 / +1
Query: 591 DLEYCKNTQNWYCYAKTVAEQGAWEVARKRG 683
DL QNWYCYAKTVAE+ A E A K G
Sbjct: 349 DLPCMIKIQNWYCYAKTVAEKTAMEDASKIG 441
>gb|BE363053.1|BE363053 DG1_9_D02.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 509
Score = 101 bits (215), Expect(2) = 2e-024
Identities = 43/86 (50%), Positives = 52/86 (60%)
Frame = +3 / +2
Query: 171 GRTVCVTGAGGFIASWLVKRLLEKGYTVRGTVRNPVDPKNDHLRALDGXXXXXXXXXXXX 350
G TVCVTGAGGFIASWLVK LL +GYTV GTVR+ D K +HL+ L+
Sbjct: 146 GTTVCVTGAGGFIASWLVKLLLSRGYTVHGTVRDLSDEKTNHLKRLENAAGNLRIFKADL 325
Query: 351 XXPQSLAEAFSGCDGVFHAASPVTDD 428
++A A GC GV H A+PV +
Sbjct: 326 LDYDAMAAAVVGCQGVLHVATPVPSE 403
Score = 56.5 bits (117), Expect(2) = 9e-009
Identities = 26/42 (61%), Positives = 26/42 (61%)
Frame = -2 / -3
Query: 295 WSFFGSTGFLTVPRTV*PFSRRRLTSQEAMNPPAPVTQTVRP 170
W F S TVP TV*P R TS EAMNPPAPVT TV P
Sbjct: 270 WFVFSSLRSRTVPCTV*PRESRSFTSHEAMNPPAPVTHTVVP 145
Score = 48.3 bits (99), Expect = 3e-004
Identities = 24/77 (31%), Positives = 41/77 (53%)
Frame = -1 / -2
Query: 410 GGVEDAVTAGEGLGKALWVQQVGAEEDETVDGAVKGPQVVVLWIHRVPDRAADCVALLQE 231
G +E+++ + + VQQ+ E E ++ Q+V L + V D A VA ++
Sbjct: 385 GHMENSLAPDDRSCHGVVVQQISLENPEVSGSILQALQMVRLLVTEVADGAVHGVAAGEQ 206
Query: 230 ALDEPGGNEPSSSGHAN 180
L EP G+EP+ +GHA+
Sbjct: 205 ELHEPRGDEPAGAGHAH 155
Score = 33.1 bits (66), Expect(2) = 2e-024
Identities = 15/32 (46%), Positives = 20/32 (62%)
Frame = +3 / +2
Query: 417 VTDDPEMMIEPAIRGTRYVMAAADDAGVKRVV 512
+TD M+ PA+ GT V+ AA A V+RVV
Sbjct: 407 LTDPELQMLGPAVTGTTNVLKAASAANVQRVV 502
Score = 25.4 bits (49), Expect(2) = 9e-009
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = -2 / -3
Query: 418 TGEAAWKTPSQPEKASA 368
TG A W+TP P A+A
Sbjct: 393 TGVATWRTPWHPTTAAA 343
>gb|CB927150.1|CB927150 ABA1_13_F08.g1_A012 Abscisic acid-treated seedlings Sorghum bicolor
cDNA clone ABA1_13_F08_A012 5', mRNA sequence
Length = 627
Score = 114 bits (244), Expect = 3e-024
Identities = 47/79 (59%), Positives = 53/79 (67%)
Frame = +3 / +3
Query: 165 GQGRTVCVTGAGGFIASWLVKRLLEKGYTVRGTVRNPVDPKNDHLRALDGXXXXXXXXXX 344
G G+TVCVTGA G+IASWLVK LLEKGYTV+GTVRNP DPKN HL+ALDG
Sbjct: 390 GNGQTVCVTGAAGYIASWLVKMLLEKGYTVKGTVRNPDDPKNAHLKALDGAAERLILCKA 569
Query: 345 XXXXPQSLAEAFSGCDGVF 401
++ A GC GVF
Sbjct: 570 DLLDYDAICRAVQGCQGVF 626
Score = 67.0 bits (140), Expect = 7e-010
Identities = 30/43 (69%), Positives = 32/43 (74%)
Frame = -2 / -3
Query: 292 SFFGSTGFLTVPRTV*PFSRRRLTSQEAMNPPAPVTQTVRPCP 164
+FFGS+GFLTVP TV PFS LTS EAM P APVT TV P P
Sbjct: 517 AFFGSSGFLTVPLTVYPFSSSILTSHEAMYPAAPVTHTVCPFP 389
Score = 63.4 bits (132), Expect = 8e-009
Identities = 31/74 (41%), Positives = 45/74 (60%)
Frame = -1 / -2
Query: 401 EDAVTAGEGLGKALWVQQVGAEEDETVDGAVKGPQVVVLWIHRVPDRAADCVALLQEALD 222
EDA+ A G + VQ+VG ED+ + AV+ +V VL + VPD A D V+L ++ LD
Sbjct: 626 EDALAALHGAADGVVVQEVGLAEDQPLGRAVQRLEVRVLRVIWVPDGALDSVSLFEQHLD 447
Query: 221 EPGGNEPSSSGHAN 180
EP G+ P +G A+
Sbjct: 446 EPRGDVPGRAGDAH 405
>gb|CW254775.1|CW254775 104_719_11225861_116_35122_029 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11225861, DNA
sequence
Length = 667
Score = 83.5 bits (176), Expect(3) = 3e-024
Identities = 32/60 (53%), Positives = 44/60 (73%)
Frame = +3 / -1
Query: 438 MIEPAIRGTRYVMAAADDAGVKRVVFTSSIGTVYMNPYRDPSKPVDDTCWSDLEYCKNTQ 617
++ AI GT+ + AA D GV+RVV+TSS G V+MNP R P + VD++CWSDLE+C T+
Sbjct: 457 LMAAAIEGTKNAINAAADMGVQRVVYTSSYGAVHMNPKRSPDEVVDESCWSDLEFCLKTK 278
Score = 55.6 bits (115), Expect(2) = 2e-008
Identities = 28/53 (52%), Positives = 36/53 (67%)
Frame = -2 / +3
Query: 616 WVFLQYSRSLQQVSSTGLLGSR*GFMYTVPMEDVNTTRFTPASSAAAIT*RVP 458
+VF Q SRSLQQ+SST G GF++T P ++V TTR TP S+AA + VP
Sbjct: 279 FVFRQNSRSLQQLSSTTSSGLLFGFIWTAP*DEVYTTRCTPISAAALMAFFVP 437
Score = 40.5 bits (82), Expect(3) = 3e-024
Identities = 16/23 (69%), Positives = 19/23 (82%)
Frame = +3 / -3
Query: 615 QNWYCYAKTVAEQGAWEVARKRG 683
QN+YC+AKTVAE+ A E A KRG
Sbjct: 137 QNFYCFAKTVAEKTAMEEASKRG 69
Score = 32.7 bits (65), Expect(3) = 3e-024
Identities = 12/23 (52%), Positives = 17/23 (73%)
Frame = +3 / -2
Query: 360 QSLAEAFSGCDGVFHAASPVTDD 428
+SL AF C+GVFH A PV+++
Sbjct: 645 KSLVAAFRLCEGVFHVACPVSNN 577
Score = 28.1 bits (55), Expect(2) = 2e-008
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = -2 / +2
Query: 418 TGEAAWKTPSQPEKAS 371
TG+A WKTPSQ A+
Sbjct: 587 TGQATWKTPSQSLNAA 634
>gb|CN124163.1|CN124163 RHOH1_3_B09.b1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_3_B09_A002 3', mRNA sequence
Length = 695
Score = 72.1 bits (151), Expect(2) = 4e-024
Identities = 30/74 (40%), Positives = 41/74 (55%)
Frame = +3 / +1
Query: 744 NASTDHVMKYLTGSATTYVNAAQAYVHVRDVAEAHVRVYEAPHAHGRYICAESTLHRGDL 923
NAS+ ++ Y G T N + V VRDVA+A + YE P A GRYIC+ + D+
Sbjct: 211 NASSKILLNYFKGDRETIENRLRNIVDVRDVADALLLAYEKPEASGRYICSSQPIKVSDM 390
Query: 924 CRVLAKLFPEYPVP 965
+L L+P YP P
Sbjct: 391 INILKTLYPTYPYP 432
Score = 61.6 bits (128), Expect(2) = 4e-024
Identities = 20/50 (40%), Positives = 32/50 (64%)
Frame = +3 / +1
Query: 534 VYMNPYRDPSKPVDDTCWSDLEYCKNTQNWYCYAKTVAEQGAWEVARKRG 683
++ NPY K D+ CWSD +YC+ ++WY +KT++E+ A+ A K G
Sbjct: 1 IFSNPYWPKGKAFDEDCWSDEDYCRKNEDWYYLSKTLSEREAFAYAAKTG 150
Score = 41.8 bits (85), Expect = 0.026
Identities = 23/54 (42%), Positives = 30/54 (55%)
Frame = -2 / -1
Query: 892 QM*RPCAWGASYTRTCASATSLTCTYACAAFT*VVADPVRYFITWSVLAFTVGC 731
QM RP A G SY R ASATS T T + F+ V P++ + +LAF + C
Sbjct: 359 QMYRPDASGFSYARRRASATSRTSTIFLSLFSMVSRSPLK*LRSILLLAFNIDC 198
>gb|CN147237.1|CN147237 WOUND1_48_B05.g1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_48_B05_A002 5', mRNA sequence
Length = 737
Score = 56.5 bits (117), Expect(4) = 5e-024
Identities = 23/39 (58%), Positives = 26/39 (66%)
Frame = +3 / +1
Query: 165 GQGRTVCVTGAGGFIASWLVKRLLEKGYTVRGTVRNPVD 281
G VCVTG GFI SWLV+ LL +GYTV TV+N D
Sbjct: 106 GGSSLVCVTGGSGFIGSWLVRLLLGRGYTVHATVKNLQD 222
Score = 45.5 bits (93), Expect(2) = 9e-007
Identities = 22/31 (70%), Positives = 22/31 (70%)
Frame = -2 / -1
Query: 271 FLTVPRTV*PFSRRRLTSQEAMNPPAPVTQT 179
FLTV TV*P RRR TSQE M P PVTQT
Sbjct: 212 FLTVAWTV*PRPRRRRTSQEPMKPLPPVTQT 120
Score = 42.8 bits (87), Expect(4) = 5e-024
Identities = 19/42 (45%), Positives = 25/42 (59%)
Frame = +3 / +1
Query: 423 DDPEMMIEPAIRGTRYVMAAADDAGVKRVVFTSSIGTVYMNP 548
D ++EPA++GT V+ AA D GV RVV SS + NP
Sbjct: 382 DPENELVEPALKGTLSVLRAAKDCGVGRVVMVSSQTAMVPNP 507
Score = 39.6 bits (80), Expect(4) = 5e-024
Identities = 17/47 (36%), Positives = 22/47 (46%)
Frame = +3 / +1
Query: 279 DPKNDHLRALDGXXXXXXXXXXXXXXPQSLAEAFSGCDGVFHAASPV 419
+ + HL+A+DG P S+ A G GVFH ASPV
Sbjct: 223 ESETKHLQAMDGANSRLRLFQMDLLEPASIRPAVEGARGVFHVASPV 363
Score = 38.2 bits (77), Expect = 0.32
Identities = 16/27 (59%), Positives = 17/27 (62%)
Frame = +2 / +3
Query: 200 RVHCLLARQAPPGEGLHSPRHGQEPCG 280
R+H LLAR P LH PRH QEP G
Sbjct: 141 RLHRLLARPPPSRSRLHRPRHRQEPPG 221
Score = 35.9 bits (72), Expect(4) = 5e-024
Identities = 14/29 (48%), Positives = 21/29 (72%)
Frame = +3 / +1
Query: 819 VHVRDVAEAHVRVYEAPHAHGRYICAEST 905
V VRDVA++ + +YE A GR++C ES+
Sbjct: 619 VDVRDVAQSLIVLYENTSAEGRHLCLESS 705
Score = 29.5 bits (58), Expect(2) = 9e-007
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = -2 / -1
Query: 421 VTGEAAWKTPSQPEKASARLCG 356
+TGEA WKTP P A G
Sbjct: 365 MTGEATWKTPRAPSTAGRMEAG 300
>gb|CW491513.1|CW491513 fsbb001f281g15f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f281g15, DNA
sequence
Length = 685
Score = 70.7 bits (148), Expect(3) = 6e-024
Identities = 28/51 (54%), Positives = 33/51 (64%)
Frame = +3 / +1
Query: 819 VHVRDVAEAHVRVYEAPHAHGRYICAESTLHRGDLCRVLAKLFPEYPVPTK 971
V +RDVA AHV YE P A GRY+C + LHR L +L LFP+YPV K
Sbjct: 4 VDIRDVARAHVLAYERPAARGRYLCIGTVLHRAQLVAMLRDLFPKYPVTAK 156
Score = 45.1 bits (92), Expect(3) = 6e-024
Identities = 15/30 (50%), Positives = 23/30 (76%)
Frame = +3 / +2
Query: 969 KCKDQVNPPVVGYKFTNQRLKDLGMDFVPV 1058
+C+D P V Y+F+NQRL+DLG++F P+
Sbjct: 275 RCEDDGKPMVKPYRFSNQRLRDLGLEFTPL 364
Score = 41.8 bits (85), Expect(2) = 5e-009
Identities = 23/46 (50%), Positives = 26/46 (56%)
Frame = -1 / -2
Query: 980 VLALGGYGVLREELGEDAAEVAAVQGALGADVAAVRVGRLVHPDVR 843
V LG GVL EE+ E E+ AVQ A+V A R G LV DVR
Sbjct: 165 VCLLGRDGVLGEEVPEHGDELCAVQHGADAEVPAARGGALVGEDVR 28
Score = 40.9 bits (83), Expect(2) = 5e-009
Identities = 19/30 (63%), Positives = 20/30 (66%)
Frame = -2 / -2
Query: 1057 TGTKSIPRSLSLWLVNLYPTTGGLTWSLHL 968
+G S PRSLSLWL NLY T GL S HL
Sbjct: 363 SGVNSKPRSLSLWLENLYGFTIGLPSSSHL 274
Score = 40.5 bits (82), Expect(3) = 2e-005
Identities = 22/52 (42%), Positives = 24/52 (46%)
Frame = -2 / -3
Query: 973 HLVGTGYSGKSLARTRQRSPRCRVLSAQM*RPCAWGASYTRTCASATSLTCT 818
+L TGY GK RC + Q RP A G S RTCA ATS T
Sbjct: 158 YLAVTGYLGKRSLSMATSCARCSTVPMQRYRPRAAGRS*ARTCARATSRMST 3
Score = 35.0 bits (70), Expect(3) = 6e-024
Identities = 14/23 (60%), Positives = 17/23 (73%)
Frame = +2 / +2
Query: 1061 QCLYETVTSLQEKGMLPVLPTKQ 1129
+ LYETV LQ+KG LPV+ KQ
Sbjct: 368 ESLYETVVCLQQKGHLPVIKQKQ 436
Score = 29.5 bits (58), Expect(3) = 2e-005
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = -1 / -1
Query: 1055 RHEVHPQILEPLVGELVSYHRRVNLVLA 972
R E Q+ EPLVGE V H + +V A
Sbjct: 361 RSEFQAQVSEPLVGEPVRLHHWLTVVFA 278
Score = 21.7 bits (41), Expect(3) = 2e-005
Identities = 10/21 (47%), Positives = 11/21 (52%)
Frame = -3 / -2
Query: 1128 CFVGSTGSMPFSWRLVTVS*R 1066
CF TG PF + TVS R
Sbjct: 435 CFCLMTGRWPFCCKHTTVSYR 373
>gb|CW254776.1|CW254776 104_719_11225861_148_35126_029 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11225861, DNA
sequence
Length = 731
Score = 64.3 bits (134), Expect(3) = 8e-024
Identities = 26/33 (78%), Positives = 28/33 (84%)
Frame = +3 / +3
Query: 180 VCVTGAGGFIASWLVKRLLEKGYTVRGTVRNPV 278
VCVTGAGGFI S LVK LL++GY VRGT RNPV
Sbjct: 135 VCVTGAGGFIGSSLVKELLQRGYRVRGTARNPV 233
Score = 46.4 bits (95), Expect(3) = 8e-024
Identities = 21/50 (42%), Positives = 26/50 (52%)
Frame = +3 / +1
Query: 279 DPKNDHLRALDGXXXXXXXXXXXXXXPQSLAEAFSGCDGVFHAASPVTDD 428
D KN HL ALDG +SL AF C+GVFH A PV+++
Sbjct: 355 DRKNAHLHALDGAKERLSLCRADVLDYKSLVAAFRLCEGVFHVACPVSNN 504
Score = 45.1 bits (92), Expect(3) = 8e-024
Identities = 19/36 (52%), Positives = 26/36 (72%)
Frame = +3 / +3
Query: 438 MIEPAIRGTRYVMAAADDAGVKRVVFTSSIGTVYMN 545
++ AI GT+ + AA D GV+RVV+TSS G V+MN
Sbjct: 624 LMAAAIEGTKNAINAAADMGVQRVVYTSSYGAVHMN 731
Score = 43.7 bits (89), Expect(2) = 7e-005
Identities = 20/33 (60%), Positives = 21/33 (63%)
Frame = -2 / -2
Query: 277 TGFLTVPRTV*PFSRRRLTSQEAMNPPAPVTQT 179
TGFL VP T *P LTS + M PPAPVT T
Sbjct: 232 TGFLAVPLTR*PRWSSSLTSDDPMKPPAPVTHT 134
Score = 34.1 bits (68), Expect = 5.7
Identities = 16/31 (51%), Positives = 19/31 (61%)
Frame = -1 / -1
Query: 272 VPDRAADCVALLQEALDEPGGNEPSSSGHAN 180
VP A VA L++ DE NE SSSGHA+
Sbjct: 227 VPCGAPHAVATLEQLFDERRPNEASSSGHAH 135
Score = 28.1 bits (55), Expect(2) = 7e-005
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = -2 / -1
Query: 418 TGEAAWKTPSQPEKAS 371
TG+A WKTPSQ A+
Sbjct: 494 TGQATWKTPSQSLNAA 447
>gb|CN125588.1|CN125588 RHOH1_12_B03.b1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_12_B03_A002 3', mRNA sequence
Length = 763
Score = 83.1 bits (175), Expect(2) = 9e-024
Identities = 30/68 (44%), Positives = 46/68 (67%)
Frame = +3 / +1
Query: 480 AADDAGVKRVVFTSSIGTVYMNPYRDPSKPVDDTCWSDLEYCKNTQNWYCYAKTVAEQGA 659
A+ +A VK VV SS+ V +NP + +D+ CWSD+E+C+ QNWYC +KT+AE A
Sbjct: 4 ASSEAKVKGVVVVSSVAAVMVNPGWPQDEVMDEACWSDVEFCRTNQNWYCLSKTLAETEA 183
Query: 660 WEVARKRG 683
++ A++ G
Sbjct: 184 FDYAKRTG 207
Score = 52.8 bits (109), Expect(2) = 9e-024
Identities = 25/65 (38%), Positives = 33/65 (50%)
Frame = +3 / +1
Query: 816 YVHVRDVAEAHVRVYEAPHAHGRYICAESTLHRGDLCRVLAKLFPEYPVPTKCKDQVNPP 995
+V VRDVA A + VYE P A GRYIC + D+ +L +P Y TK + P
Sbjct: 337 FVDVRDVANALLLVYETPEASGRYICDANARQVSDVIALLKNWYPAYNHATKLVQVSDEP 516
Query: 996 VVGYK 1010
+ K
Sbjct: 517 LFSSK 531
Score = 39.6 bits (80), Expect = 0.13
Identities = 20/45 (44%), Positives = 25/45 (55%)
Frame = -2 / -3
Query: 952 SGKSLARTRQRSPRCRVLSAQM*RPCAWGASYTRTCASATSLTCT 818
+G + S C ++QM*RP A G SYTR+ A ATS T T
Sbjct: 473 AGYQFFSSAMTSDTCLAFASQM*RPDASGVSYTRSRALATSRTST 339
>gb|CW307093.1|CW307093 104_795_11467960_148_35737_064 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11467960, DNA
sequence
Length = 665
Score = 68.4 bits (143), Expect(2) = 1e-023
Identities = 26/40 (65%), Positives = 32/40 (80%)
Frame = +3 / -3
Query: 180 VCVTGAGGFIASWLVKRLLEKGYTVRGTVRNPVDPKNDHL 299
VCVTGAGGFI SWLVK LL++GY VRGT R+P + + H+
Sbjct: 408 VCVTGAGGFIGSWLVKELLQRGYAVRGTARDPGE*VSQHV 289
Score = 63.8 bits (133), Expect(2) = 1e-023
Identities = 27/53 (50%), Positives = 30/53 (56%)
Frame = +3 / -1
Query: 273 PVDPKNDHLRALDGXXXXXXXXXXXXXXPQSLAEAFSGCDGVFHAASPVTDDP 431
P D KN HLRALDG SL AFS CDGVFH ASP+++DP
Sbjct: 182 PEDSKNSHLRALDGAQERLSLYHADVLDYMSLRRAFSLCDGVFHVASPISNDP 24
Score = 43.7 bits (89), Expect(2) = 8e-007
Identities = 19/32 (59%), Positives = 23/32 (71%)
Frame = -1 / +1
Query: 275 RVPDRAADCVALLQEALDEPGGNEPSSSGHAN 180
RVP A D VA L++ LD+P NE SSSGHA+
Sbjct: 313 RVPGGAPDSVAALEQLLDQP*PNEASSSGHAH 408
Score = 40.5 bits (82), Expect(2) = 0.001
Identities = 19/34 (55%), Positives = 20/34 (58%)
Frame = -2 / +2
Query: 280 STGFLTVPRTV*PFSRRRLTSQEAMNPPAPVTQT 179
S G L VP T *P LTS + M PPAPVT T
Sbjct: 308 SPGSLAVPLTA*PRWSSSLTSHDPMKPPAPVTHT 409
Score = 34.5 bits (69), Expect(2) = 8e-007
Identities = 17/49 (34%), Positives = 27/49 (55%)
Frame = -1 / +3
Query: 431 RVIGDRGGGVEDAVTAGEGLGKALWVQQVGAEEDETVDGAVKGPQVVVL 285
R+IG RGG +ED +T EG K VQ + + +++ PQ+ +L
Sbjct: 24 RIIGYRGGNMEDTIT*AEGTTK*HVVQHISMVQR*PFLSSIQCPQMGIL 170
Score = 26.7 bits (52), Expect(2) = 0.001
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = -2 / +1
Query: 415 GEAAWKTPSQPEKA 374
GEA WKTPS KA
Sbjct: 40 GEATWKTPSHKLKA 81
>gb|BE357273.1|BE357273 DG1_148_D02.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 548
Score = 111 bits (237), Expect = 3e-023
Identities = 48/84 (57%), Positives = 53/84 (63%)
Frame = +3 / +2
Query: 177 TVCVTGAGGFIASWLVKRLLEKGYTVRGTVRNPVDPKNDHLRALDGXXXXXXXXXXXXXX 356
TVCVTGAGG+IASWLVK LL +GYTV TVR+P DPKN HL L+G
Sbjct: 203 TVCVTGAGGYIASWLVKLLLSRGYTVHATVRDPGDPKNAHLGRLEGASENLRLFKANVLD 382
Query: 357 PQSLAEAFSGCDGVFHAASPVTDD 428
+LA A SGC GVFH A PV D
Sbjct: 383 QNALAAAVSGCRGVFHLACPVPTD 454
Score = 59.3 bits (123), Expect(2) = 2e-011
Identities = 27/40 (67%), Positives = 28/40 (70%)
Frame = -2 / -3
Query: 295 WSFFGSTGFLTVPRTV*PFSRRRLTSQEAMNPPAPVTQTV 176
W+F GS G TV TV*P RR LTS EAM PPAPVT TV
Sbjct: 321 WAFLGSPGSRTVACTV*PRERRSLTSHEAM*PPAPVTHTV 202
Score = 59.3 bits (123), Expect = 1e-007
Identities = 31/81 (38%), Positives = 44/81 (54%)
Frame = -1 / -2
Query: 422 GDRGGGVEDAVTAGEGLGKALWVQQVGAEEDETVDGAVKGPQVVVLWIHRVPDRAADCVA 243
G R G +ED G+ + + V+ VG E+ E + G + PQV VL I RV D VA
Sbjct: 448 GHRTGKMEDPPAPGDCGSQRVLVEHVGLEQPEVLRGPFQPPQVGVLGITRVADGGVHGVA 269
Query: 242 LLQEALDEPGGNEPSSSGHAN 180
+E LDEP G+ + + HA+
Sbjct: 268 AGEEELDEPRGDVAAGARHAH 206
Score = 35.4 bits (71), Expect(2) = 0.82
Identities = 16/30 (53%), Positives = 19/30 (63%)
Frame = +2 / +1
Query: 200 RVHCLLARQAPPGEGLHSPRHGQEPCGSKE 289
R+H L+ARQAPP LH RH P S+E
Sbjct: 226 RLHRLVARQAPPLPRLHRARHRPRPG*SQE 315
Score = 31.8 bits (63), Expect(2) = 2e-011
Identities = 11/17 (64%), Positives = 13/17 (76%)
Frame = -2 / -3
Query: 418 TGEAAWKTPSQPEKASA 368
TG+A WKTP PE A+A
Sbjct: 444 TGQARWKTPRHPETAAA 394
Score = 21.7 bits (41), Expect(2) = 0.82
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +1 / +3
Query: 838 PRRTSGC 858
PRRTSGC
Sbjct: 342 PRRTSGC 362
>gb|CX614598.1|CX614598 GABR1_15_C04.b1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_15_C04_A002 3', mRNA sequence
Length = 744
Score = 80.3 bits (169), Expect(2) = 6e-023
Identities = 28/61 (45%), Positives = 42/61 (68%)
Frame = +3 / +3
Query: 501 KRVVFTSSIGTVYMNPYRDPSKPVDDTCWSDLEYCKNTQNWYCYAKTVAEQGAWEVARKR 680
KRVV SS+ V +NP + +D+ CWSD+E+C+ QNWYC +KT+AE A++ A++
Sbjct: 3 KRVVVVSSVAAVMVNPGWPQDEVMDEACWSDVEFCRTNQNWYCLSKTLAETEAFDYAKRT 182
Query: 681 G 683
G
Sbjct: 183 G 185
Score = 52.8 bits (109), Expect(2) = 6e-023
Identities = 25/65 (38%), Positives = 33/65 (50%)
Frame = +3 / +3
Query: 816 YVHVRDVAEAHVRVYEAPHAHGRYICAESTLHRGDLCRVLAKLFPEYPVPTKCKDQVNPP 995
+V VRDVA A + VYE P A GRYIC + D+ +L +P Y TK + P
Sbjct: 315 FVDVRDVANALLLVYETPEASGRYICDANARQVSDVIALLKNWYPAYNHATKLVQVSDEP 494
Query: 996 VVGYK 1010
+ K
Sbjct: 495 LFSSK 509
Score = 39.6 bits (80), Expect = 0.13
Identities = 20/45 (44%), Positives = 25/45 (55%)
Frame = -2 / -3
Query: 952 SGKSLARTRQRSPRCRVLSAQM*RPCAWGASYTRTCASATSLTCT 818
+G + S C ++QM*RP A G SYTR+ A ATS T T
Sbjct: 451 AGYQFFSSAMTSDTCLAFASQM*RPDASGVSYTRSRALATSRTST 317
>gb|CW316181.1|CW316181 104_807_11472758_116_35843_055 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11472758, DNA
sequence
Length = 620
Score = 51.5 bits (106), Expect(3) = 6e-023
Identities = 20/23 (86%), Positives = 21/23 (91%)
Frame = +3 / -2
Query: 177 TVCVTGAGGFIASWLVKRLLEKG 245
TVCVTGAGGFIASWLV+RLL G
Sbjct: 565 TVCVTGAGGFIASWLVQRLLSSG 497
Score = 51.0 bits (105), Expect(3) = 6e-023
Identities = 23/62 (37%), Positives = 34/62 (54%)
Frame = +3 / -3
Query: 408 ASPVTDDPEMMIEPAIRGTRYVMAAADDAGVKRVVFTSSIGTVYMNPYRDPSKPVDDTCW 587
AS D ++ PA+ GTR V+ A +A V+RVV SS+ + +NP +D+ W
Sbjct: 186 ASKPADPELEVVAPAVDGTRNVLRACHEANVRRVVVVSSVAAIAVNPNCRNGVVLDEEWW 7
Query: 588 SD 593
SD
Sbjct: 6 SD 1
Score = 49.6 bits (102), Expect(3) = 6e-023
Identities = 22/47 (46%), Positives = 24/47 (51%)
Frame = +3 / -3
Query: 279 DPKNDHLRALDGXXXXXXXXXXXXXXPQSLAEAFSGCDGVFHAASPV 419
DPK HL ALDG +A A +GCDGVFH ASPV
Sbjct: 330 DPKYAHLMALDGAVERLRLFKADMLDHAGVAAAVAGCDGVFHVASPV 190
Score = 43.7 bits (89), Expect(3) = 4e-010
Identities = 17/23 (73%), Positives = 18/23 (78%)
Frame = -2 / +3
Query: 244 PFSRRRLTSQEAMNPPAPVTQTV 176
P RRR TS +AM PPAPVTQTV
Sbjct: 498 PLERRRCTSHDAMKPPAPVTQTV 566
Score = 40.5 bits (82), Expect(3) = 4e-010
Identities = 21/45 (46%), Positives = 26/45 (57%)
Frame = -1 / +1
Query: 419 DRGGGVEDAVTAGEGLGKALWVQQVGAEEDETVDGAVKGPQVVVL 285
D G VEDAV AG G A VQ V E+ + + GA++ QV VL
Sbjct: 190 DGAGNVEDAVAAGHGSRDAGVVQHVRLEQPQPLHGAIQRHQVRVL 324
Score = 31.8 bits (63), Expect(2) = 0.38
Identities = 12/17 (70%), Positives = 13/17 (76%)
Frame = -2 / +2
Query: 418 TGEAAWKTPSQPEKASA 368
TG A WKTPSQP A+A
Sbjct: 191 TGLATWKTPSQPATAAA 241
Score = 26.7 bits (52), Expect(2) = 0.38
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = -1 / +2
Query: 254 DCVALLQEALDEPGGNEPSSSGHAN 180
D A +EAL +P +E +S+ HAN
Sbjct: 488 DVAAAGEEALHQPRRDEATSASHAN 562
Score = 24.0 bits (46), Expect(3) = 4e-010
Identities = 13/30 (43%), Positives = 15/30 (50%)
Frame = -2 / +2
Query: 547 GFMYTVPMEDVNTTRFTPASSAAAIT*RVP 458
GF ++ TTR T AS A T RVP
Sbjct: 47 GFTAMAATDETTTTRRTLASWQALSTLRVP 136
>gb|CW338277.1|CW338277 104_838_11484658_116_36129_039 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11484658, DNA
sequence
Length = 647
Score = 51.5 bits (106), Expect(3) = 7e-023
Identities = 20/23 (86%), Positives = 21/23 (91%)
Frame = +3 / -2
Query: 177 TVCVTGAGGFIASWLVKRLLEKG 245
TVCVTGAGGFIASWLV+RLL G
Sbjct: 568 TVCVTGAGGFIASWLVQRLLSSG 500
Score = 51.0 bits (105), Expect(3) = 7e-023
Identities = 23/62 (37%), Positives = 34/62 (54%)
Frame = +3 / -3
Query: 408 ASPVTDDPEMMIEPAIRGTRYVMAAADDAGVKRVVFTSSIGTVYMNPYRDPSKPVDDTCW 587
AS D ++ PA+ GTR V+ A +A V+RVV SS+ + +NP +D+ W
Sbjct: 189 ASKPADPELEVVAPAVDGTRNVLRACHEANVRRVVVVSSVAAIAVNPNCRNGVVLDEEWW 10
Query: 588 SD 593
SD
Sbjct: 9 SD 4
Score = 49.6 bits (102), Expect(3) = 7e-023
Identities = 22/47 (46%), Positives = 24/47 (51%)
Frame = +3 / -3
Query: 279 DPKNDHLRALDGXXXXXXXXXXXXXXPQSLAEAFSGCDGVFHAASPV 419
DPK HL ALDG +A A +GCDGVFH ASPV
Sbjct: 333 DPKYAHLMALDGAVERLRLFKADMLDHAGVAAAVAGCDGVFHVASPV 193
Score = 43.7 bits (89), Expect(3) = 4e-010
Identities = 17/23 (73%), Positives = 18/23 (78%)
Frame = -2 / +3
Query: 244 PFSRRRLTSQEAMNPPAPVTQTV 176
P RRR TS +AM PPAPVTQTV
Sbjct: 501 PLERRRCTSHDAMKPPAPVTQTV 569
Score = 40.5 bits (82), Expect(3) = 4e-010
Identities = 21/45 (46%), Positives = 26/45 (57%)
Frame = -1 / +1
Query: 419 DRGGGVEDAVTAGEGLGKALWVQQVGAEEDETVDGAVKGPQVVVL 285
D G VEDAV AG G A VQ V E+ + + GA++ QV VL
Sbjct: 193 DGAGNVEDAVAAGHGSRDAGVVQHVRLEQPQPLHGAIQRHQVRVL 327
Score = 31.8 bits (63), Expect(2) = 0.39
Identities = 12/17 (70%), Positives = 13/17 (76%)
Frame = -2 / +2
Query: 418 TGEAAWKTPSQPEKASA 368
TG A WKTPSQP A+A
Sbjct: 194 TGLATWKTPSQPATAAA 244
Score = 26.7 bits (52), Expect(2) = 0.39
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = -1 / +2
Query: 254 DCVALLQEALDEPGGNEPSSSGHAN 180
D A +EAL +P +E +S+ HAN
Sbjct: 491 DVAAAGEEALHQPRRDEATSASHAN 565
Score = 24.0 bits (46), Expect(3) = 4e-010
Identities = 13/30 (43%), Positives = 15/30 (50%)
Frame = -2 / +2
Query: 547 GFMYTVPMEDVNTTRFTPASSAAAIT*RVP 458
GF ++ TTR T AS A T RVP
Sbjct: 50 GFTAMAATDETTTTRRTLASWQALSTLRVP 139
>gb|BM323476.1|BM323476 PIC1_19_G04.b1_A002 Pathogen-infected compatible 1 (PIC1) Sorghum
bicolor cDNA, mRNA sequence
Length = 503
Score = 73.9 bits (155), Expect(3) = 2e-022
Identities = 27/42 (64%), Positives = 35/42 (83%)
Frame = +3 / +3
Query: 162 SGQGRTVCVTGAGGFIASWLVKRLLEKGYTVRGTVRNPVDPK 287
+G G+ VCVTGA G+IASW+V+ LL++GYTVR TVR+ DPK
Sbjct: 114 TGAGKVVCVTGASGYIASWIVRLLLDRGYTVRATVRDTADPK 239
Score = 54.2 bits (112), Expect(2) = 3e-007
Identities = 26/42 (61%), Positives = 27/42 (64%)
Frame = -2 / -2
Query: 289 FFGSTGFLTVPRTV*PFSRRRLTSQEAMNPPAPVTQTVRPCP 164
FFGS TV RTV*P SR LT Q+AM P APVT T P P
Sbjct: 241 FFGSAVSRTVARTV*PRSRSSLTIQDAMYPDAPVTHTTFPAP 116
Score = 36.3 bits (73), Expect(3) = 2e-022
Identities = 18/44 (40%), Positives = 18/44 (40%)
Frame = +3 / +3
Query: 285 KNDHLRALDGXXXXXXXXXXXXXXPQSLAEAFSGCDGVFHAASP 416
K HL ALDG S A GCD VFH ASP
Sbjct: 240 KTLHLTALDGAKDRLHLFKASLLEEGSFDAAVHGCDTVFHTASP 371
Score = 35.9 bits (72), Expect = 1.6
Identities = 15/36 (41%), Positives = 22/36 (61%)
Frame = -1 / -1
Query: 287 LWIHRVPDRAADCVALLQEALDEPGGNEPSSSGHAN 180
LW+ VP AD VA ++E D+PG + P +G A+
Sbjct: 239 LWVSGVPHGGADGVAAVEEQPDDPGRDVP*CAGDAH 132
Score = 35.4 bits (71), Expect(3) = 2e-022
Identities = 14/40 (35%), Positives = 24/40 (60%)
Frame = +3 / +3
Query: 417 VTDDPEMMIEPAIRGTRYVMAAADDAGVKRVVFTSSIGTV 536
V D +++PA++GT V+ + A + +VV TSS+ V
Sbjct: 384 VKDPKAELLDPAVKGTLNVLGSCKRASITKVVITSSMAAV 503
Score = 22.6 bits (43), Expect(2) = 3e-007
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = -2 / -2
Query: 415 GEAAWKTPSQPEKASAR 365
GEA W T S P A+++
Sbjct: 370 GEAVWNTVSHP*TAASK 320
>gb|CF485803.1|CF485803 POL1_33_F08.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_33_F08_A002 5', mRNA sequence
Length = 462
Score = 67.0 bits (140), Expect(2) = 2e-022
Identities = 25/32 (78%), Positives = 28/32 (87%)
Frame = +3 / +2
Query: 180 VCVTGAGGFIASWLVKRLLEKGYTVRGTVRNP 275
VCVTGAGGFI SWLVK LL++GY VRGT R+P
Sbjct: 140 VCVTGAGGFIGSWLVKELLQRGYAVRGTARDP 235
Score = 61.1 bits (127), Expect(2) = 2e-022
Identities = 25/54 (46%), Positives = 31/54 (57%)
Frame = +3 / +1
Query: 279 DPKNDHLRALDGXXXXXXXXXXXXXXPQSLAEAFSGCDGVFHAASPVTDDPEMM 440
D KN HLRALDG SL A S CDGVFH ASP+++DP+++
Sbjct: 247 DSKNSHLRALDGAQERLSLYHADVLDYMSLRRALSLCDGVFHVASPISNDPDLV 408
Score = 43.7 bits (89), Expect(2) = 3e-009
Identities = 19/32 (59%), Positives = 23/32 (71%)
Frame = -1 / -3
Query: 275 RVPDRAADCVALLQEALDEPGGNEPSSSGHAN 180
RVP A D VA L++ LD+P NE SSSGHA+
Sbjct: 235 RVPGGAPDSVAALEQLLDQP*PNEASSSGHAH 140
Score = 40.5 bits (82), Expect(2) = 4e-004
Identities = 19/34 (55%), Positives = 20/34 (58%)
Frame = -2 / -1
Query: 280 STGFLTVPRTV*PFSRRRLTSQEAMNPPAPVTQT 179
S G L VP T *P LTS + M PPAPVT T
Sbjct: 240 SPGSLAVPLTA*PRWSSSLTSHDPMKPPAPVTHT 139
Score = 39.6 bits (80), Expect(2) = 3e-009
Identities = 20/62 (32%), Positives = 32/62 (51%)
Frame = -1 / -1
Query: 440 HHLRVIGDRGGGVEDAVTAGEGLGKALWVQQVGAEEDETVDGAVKGPQVVVLWIHRVPDR 261
H +R+IG RGG +ED +T EG K VQ + + +++ PQ+ +L + P
Sbjct: 408 HKVRIIGYRGGNMEDTIT*AEGTTK*HVVQHISMVQR*PFLSSIQCPQMGILRVLHSPGS 229
Query: 260 AA 255
A
Sbjct: 228 LA 223
Score = 25.4 bits (49), Expect(2) = 4e-004
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = -2 / -2
Query: 415 GEAAWKTPSQPEKA 374
GEA WKTPS +A
Sbjct: 383 GEATWKTPSHKLRA 342
>gb|CD213428.1|CD213428 HS1_40_A07.g1_A012 Heat-shocked seedlings Sorghum bicolor cDNA
clone HS1_40_A07_A012 5', mRNA sequence
Length = 595
Score = 101 bits (215), Expect(2) = 2e-022
Identities = 43/86 (50%), Positives = 52/86 (60%)
Frame = +3 / +3
Query: 171 GRTVCVTGAGGFIASWLVKRLLEKGYTVRGTVRNPVDPKNDHLRALDGXXXXXXXXXXXX 350
G TVCVTGAGGFIASWLVK LL +GYTV GTVR+ D K +HL+ L+
Sbjct: 99 GTTVCVTGAGGFIASWLVKLLLSRGYTVHGTVRDLSDEKTNHLKRLENAAGNLRIFKADL 278
Query: 351 XXPQSLAEAFSGCDGVFHAASPVTDD 428
++A A GC GV H A+PV +
Sbjct: 279 LDYDAMAAAVVGCQGVLHVATPVPSE 356
Score = 56.5 bits (117), Expect(3) = 9e-011
Identities = 26/42 (61%), Positives = 26/42 (61%)
Frame = -2 / -1
Query: 295 WSFFGSTGFLTVPRTV*PFSRRRLTSQEAMNPPAPVTQTVRP 170
W F S TVP TV*P R TS EAMNPPAPVT TV P
Sbjct: 223 WFVFSSLRSRTVPCTV*PRESRSFTSHEAMNPPAPVTHTVVP 98
Score = 48.3 bits (99), Expect = 3e-004
Identities = 24/77 (31%), Positives = 41/77 (53%)
Frame = -1 / -3
Query: 410 GGVEDAVTAGEGLGKALWVQQVGAEEDETVDGAVKGPQVVVLWIHRVPDRAADCVALLQE 231
G +E+++ + + VQQ+ E E ++ Q+V L + V D A VA ++
Sbjct: 338 GHMENSLAPDDRSCHGVVVQQISLENPEVSGSILQALQMVRLLVTEVADGAVHGVAAGEQ 159
Query: 230 ALDEPGGNEPSSSGHAN 180
L EP G+EP+ +GHA+
Sbjct: 158 ELHEPRGDEPAGAGHAH 108
Score = 29.5 bits (58), Expect(2) = 2e-022
Identities = 7/15 (46%), Positives = 13/15 (86%)
Frame = +3 / +3
Query: 573 DDTCWSDLEYCKNTQ 617
D++CWSD E+C++ +
Sbjct: 474 DESCWSDKEFCRSIE 518
Score = 25.4 bits (49), Expect(3) = 9e-011
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = -2 / -1
Query: 418 TGEAAWKTPSQPEKASA 368
TG A W+TP P A+A
Sbjct: 346 TGVATWRTPWHPTTAAA 296
Score = 23.5 bits (45), Expect(3) = 9e-011
Identities = 16/55 (29%), Positives = 22/55 (40%)
Frame = -2 / -1
Query: 661 HAPCSATVLA*QYQFWVFLQYSRSLQQVSSTGLLGSR*GFMYTVPMEDVNTTRFT 497
++ C LA Q + Q S T G G + T M+D TTR+T
Sbjct: 559 YSKCLMQKLAVQVTSMLLQNSLSDQQLSSRTLPSGQSLGLISTATMDDTTTTRWT 395
>gb|BM324287.1|BM324287 PIC1_26_E07.b1_A002 Pathogen-infected compatible 1 (PIC1) Sorghum
bicolor cDNA, mRNA sequence
Length = 459
Score = 97.7 bits (207), Expect(2) = 5e-022
Identities = 39/85 (45%), Positives = 53/85 (62%)
Frame = +3 / +1
Query: 423 DDPEMMIEPAIRGTRYVMAAADDAGVKRVVFTSSIGTVYMNPYRDPSKPVDDTCWSDLEY 602
D + ++EPA++GT V+ AA D GV RVV SS + NP P K +DD CW+D+E
Sbjct: 103 DPEKELLEPAVKGTLNVLRAAKDCGVGRVVLMSSQAAMVPNPNWPPGKVIDDDCWADVEL 282
Query: 603 CKNTQNWYCYAKTVAEQGAWEVARK 677
K Q WY +KT+AE+ AW+ A K
Sbjct: 283 LKKLQLWYSVSKTLAEKAAWDFAEK 357
Score = 29.0 bits (57), Expect(2) = 5e-022
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = +3 / +1
Query: 357 PQSLAEAFSGCDGVFHAASPV 419
P S+ A G GVFH ASP+
Sbjct: 25 PASVQPAIEGAHGVFHLASPM 87
>gb|BI211450.1|BI211450 IP1_60_H10.b1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 524
Score = 65.7 bits (137), Expect(3) = 3e-021
Identities = 26/32 (81%), Positives = 28/32 (87%)
Frame = +3 / +1
Query: 180 VCVTGAGGFIASWLVKRLLEKGYTVRGTVRNP 275
VCVTGA GFIASWL+KRLLE GY V GTVR+P
Sbjct: 52 VCVTGASGFIASWLIKRLLESGYHVVGTVRDP 147
Score = 42.8 bits (87), Expect(3) = 3e-021
Identities = 17/43 (39%), Positives = 24/43 (55%)
Frame = +3 / +1
Query: 498 VKRVVFTSSIGTVYMNPYRDPSKPVDDTCWSDLEYCKNTQNWY 626
+KRVV TSS V + P+ +D+T WS + C+ Q WY
Sbjct: 391 LKRVVLTSSSSAVRIRDDDQPNISLDETTWSSVPLCEKMQLWY 519
Score = 41.8 bits (85), Expect(3) = 1e-009
Identities = 20/33 (60%), Positives = 22/33 (66%)
Frame = -2 / -1
Query: 274 GFLTVPRTV*PFSRRRLTSQEAMNPPAPVTQTV 176
G LTVP T P S RL SQEA+ P APVT T+
Sbjct: 146 GSLTVPTT*YPDSSSRLISQEAIKPEAPVTHTL 48
Score = 33.1 bits (66), Expect(3) = 3e-021
Identities = 17/45 (37%), Positives = 17/45 (37%)
Frame = +3 / +1
Query: 285 KNDHLRALDGXXXXXXXXXXXXXXPQSLAEAFSGCDGVFHAASPV 419
K HL L G S A CDGVFH ASPV
Sbjct: 160 KTAHLWKLPGAKERLQIVRADLLEEGSFDNAVMDCDGVFHTASPV 294
Score = 29.9 bits (59), Expect(3) = 1e-009
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = -2 / -1
Query: 418 TGEAAWKTPSQPEKASARL 362
TG+A WKTPSQ A ++L
Sbjct: 293 TGDAVWKTPSQSMTALSKL 237
Score = 29.5 bits (58), Expect(3) = 1e-009
Identities = 16/42 (38%), Positives = 20/42 (47%)
Frame = -2 / -1
Query: 625 YQFWVFLQYSRSLQQVSSTGLLGSR*GFMYTVPMEDVNTTRF 500
Y +F Q L VSS+ +LG + T EDV TT F
Sbjct: 518 YHSCIFSQSGTELHVVSSSEILG*SSSLILTADDEDVRTTLF 393
>gb|BI351580.1|BI351580 IP1_72_F10.b1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 497
Score = 65.7 bits (137), Expect(3) = 3e-021
Identities = 26/32 (81%), Positives = 28/32 (87%)
Frame = +3 / +1
Query: 180 VCVTGAGGFIASWLVKRLLEKGYTVRGTVRNP 275
VCVTGA GFIASWL+KRLLE GY V GTVR+P
Sbjct: 25 VCVTGASGFIASWLIKRLLESGYHVVGTVRDP 120
Score = 42.8 bits (87), Expect(3) = 3e-021
Identities = 17/43 (39%), Positives = 24/43 (55%)
Frame = +3 / +1
Query: 498 VKRVVFTSSIGTVYMNPYRDPSKPVDDTCWSDLEYCKNTQNWY 626
+KRVV TSS V + P+ +D+T WS + C+ Q WY
Sbjct: 364 LKRVVLTSSSSAVRIRDDDQPNISLDETTWSSVPLCEKMQLWY 492
Score = 41.8 bits (85), Expect(3) = 1e-009
Identities = 20/33 (60%), Positives = 22/33 (66%)
Frame = -2 / -1
Query: 274 GFLTVPRTV*PFSRRRLTSQEAMNPPAPVTQTV 176
G LTVP T P S RL SQEA+ P APVT T+
Sbjct: 119 GSLTVPTT*YPDSSSRLISQEAIKPEAPVTHTL 21
Score = 33.1 bits (66), Expect(3) = 3e-021
Identities = 17/45 (37%), Positives = 17/45 (37%)
Frame = +3 / +1
Query: 285 KNDHLRALDGXXXXXXXXXXXXXXPQSLAEAFSGCDGVFHAASPV 419
K HL L G S A CDGVFH ASPV
Sbjct: 133 KTAHLWKLPGAKERLQIVRADLLEEGSFDNAVMDCDGVFHTASPV 267
Score = 29.9 bits (59), Expect(3) = 1e-009
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = -2 / -1
Query: 418 TGEAAWKTPSQPEKASARL 362
TG+A WKTPSQ A ++L
Sbjct: 266 TGDAVWKTPSQSMTALSKL 210
Score = 29.5 bits (58), Expect(3) = 1e-009
Identities = 16/42 (38%), Positives = 20/42 (47%)
Frame = -2 / -1
Query: 625 YQFWVFLQYSRSLQQVSSTGLLGSR*GFMYTVPMEDVNTTRF 500
Y +F Q L VSS+ +LG + T EDV TT F
Sbjct: 491 YHSCIFSQSGTELHVVSSSEILG*SSSLILTADDEDVRTTLF 366
>gb|CN137561.1|CN137561 OX1_58_D03.b1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_58_D03_A002 3', mRNA sequence
Length = 483
Score = 90.0 bits (190), Expect(2) = 3e-021
Identities = 33/51 (64%), Positives = 42/51 (82%)
Frame = +3 / +1
Query: 906 LHRGDLCRVLAKLFPEYPVPTKCKDQVNPPVVGYKFTNQRLKDLGMDFVPV 1058
LHR D+ R+LAK FPEYPVPT+C D+VNP YKF+NQ+L+DLG++F PV
Sbjct: 1 LHREDVVRILAKFFPEYPVPTRCSDEVNPRKQPYKFSNQKLRDLGLEFRPV 153
Score = 65.2 bits (136), Expect(2) = 1e-010
Identities = 30/49 (61%), Positives = 31/49 (63%)
Frame = -2 / -2
Query: 1057 TGTKSIPRSLSLWLVNLYPTTGGLTWSLHLVGTGYSGKSLARTRQRSPR 911
TG S PRS S W NLY G T S HLVGTGYSGK+LAR R S R
Sbjct: 152 TGRNSNPRSRSFWFENLYGCFRGFTSSEHLVGTGYSGKNLARMRTTSSR 6
Score = 53.3 bits (110), Expect = 9e-006
Identities = 29/52 (55%), Positives = 35/52 (67%)
Frame = -1 / -1
Query: 1061 ADRHEVHPQILEPLVGELVSYHRRVNLVLALGGYGVLREELGEDAAEVAAVQ 906
A R E+ Q+ E LV ELV RV+LV A GG GVL EELG+DA +V AV+
Sbjct: 156 AHRPELQSQVPELLVRELVRLLPRVHLVGAPGGDGVLGEELGKDADDVLAVE 1
Score = 40.5 bits (82), Expect = 0.066
Identities = 18/35 (51%), Positives = 22/35 (62%)
Frame = +2 / +3
Query: 953 VPRTHQVQGPG*PSGGRIQVHQPEAQGSGDGLRAG 1057
VPR HQV G P+ +QV +PEA G G G+ AG
Sbjct: 48 VPRPHQVLRRGEPAEAAVQVLEPEAPGPGIGVPAG 152
Score = 34.1 bits (68), Expect(2) = 3e-021
Identities = 14/19 (73%), Positives = 16/19 (84%)
Frame = +2 / +1
Query: 1061 QCLYETVTSLQEKGMLPVL 1117
Q LY+TV +LQEKG LPVL
Sbjct: 157 QSLYDTVKNLQEKGHLPVL 213
Score = 23.1 bits (44), Expect(2) = 1e-010
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = -3 / -2
Query: 1116 STGSMPFSWRLVTVS* 1069
STG PFS R TVS*
Sbjct: 212 STGRWPFS*RFFTVS* 165
>gb|AW678763.1|AW678763 WS1_1_A12.b2_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA, mRNA
sequence
Length = 527
Score = 104 bits (222), Expect = 3e-021
Identities = 41/50 (82%), Positives = 45/50 (90%)
Frame = +3 / +3
Query: 165 GQGRTVCVTGAGGFIASWLVKRLLEKGYTVRGTVRNPVDPKNDHLRALDG 314
G G+TVCVTGA G+IASWLVK LLEKGYTV+GTVRNP DPKN HL+ALDG
Sbjct: 378 GNGQTVCVTGAAGYIASWLVKMLLEKGYTVKGTVRNPDDPKNAHLKALDG 527
Score = 67.0 bits (140), Expect = 7e-010
Identities = 30/43 (69%), Positives = 32/43 (74%)
Frame = -2 / -2
Query: 292 SFFGSTGFLTVPRTV*PFSRRRLTSQEAMNPPAPVTQTVRPCP 164
+FFGS+GFLTVP TV PFS LTS EAM P APVT TV P P
Sbjct: 505 AFFGSSGFLTVPLTVYPFSSSILTSHEAMYPAAPVTHTVCPFP 377
Score = 43.7 bits (89), Expect = 0.007
Identities = 21/45 (46%), Positives = 30/45 (66%)
Frame = -1 / -1
Query: 314 AVKGPQVVVLWIHRVPDRAADCVALLQEALDEPGGNEPSSSGHAN 180
AV+ +V VL + VPD A D V+LL++ LDEP G+ P +G A+
Sbjct: 527 AVQRLEVRVLRVIWVPDGALDSVSLLEQHLDEPRGDVPGRAGDAH 393
Score = 33.6 bits (67), Expect = 7.8
Identities = 14/25 (56%), Positives = 16/25 (64%)
Frame = +2 / +2
Query: 200 RVHCLLARQAPPGEGLHSPRHGQEP 274
RVH L+ARQ EG+H H QEP
Sbjct: 413 RVHRLVARQDAAREGIHCQGHRQEP 487
>gb|BE362094.1|BE362094 DG1_84_C11.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 597
Score = 104 bits (222), Expect = 3e-021
Identities = 41/50 (82%), Positives = 45/50 (90%)
Frame = +3 / +3
Query: 165 GQGRTVCVTGAGGFIASWLVKRLLEKGYTVRGTVRNPVDPKNDHLRALDG 314
G G+TVCVTGA G+IASWLVK LLEKGYTV+GTVRNP DPKN HL+ALDG
Sbjct: 378 GNGQTVCVTGAAGYIASWLVKMLLEKGYTVKGTVRNPDDPKNAHLKALDG 527
Score = 67.0 bits (140), Expect = 7e-010
Identities = 30/43 (69%), Positives = 32/43 (74%)
Frame = -2 / -3
Query: 292 SFFGSTGFLTVPRTV*PFSRRRLTSQEAMNPPAPVTQTVRPCP 164
+FFGS+GFLTVP TV PFS LTS EAM P APVT TV P P
Sbjct: 505 AFFGSSGFLTVPLTVYPFSSSILTSHEAMYPAAPVTHTVCPFP 377
Score = 57.9 bits (120), Expect = 4e-007
Identities = 28/66 (42%), Positives = 41/66 (62%)
Frame = -1 / -2
Query: 377 GLGKALWVQQVGAEEDETVDGAVKGPQVVVLWIHRVPDRAADCVALLQEALDEPGGNEPS 198
G + VQ+VG ED+ + AV+ +V VL + VPD A D V+LL++ LDEP G+ P
Sbjct: 590 GAADGVVVQEVGLAEDQPLGRAVQRLEVRVLRVIWVPDGALDSVSLLEQHLDEPRGDVPG 411
Query: 197 SSGHAN 180
+G A+
Sbjct: 410 RAGDAH 393
Score = 33.6 bits (67), Expect = 7.8
Identities = 14/25 (56%), Positives = 16/25 (64%)
Frame = +2 / +2
Query: 200 RVHCLLARQAPPGEGLHSPRHGQEP 274
RVH L+ARQ EG+H H QEP
Sbjct: 413 RVHRLVARQDAAREGIHCQGHRQEP 487
>gb|BE362098.1|BE362098 DG1_84_D11.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 543
Score = 104 bits (222), Expect = 3e-021
Identities = 41/50 (82%), Positives = 45/50 (90%)
Frame = +3 / +3
Query: 165 GQGRTVCVTGAGGFIASWLVKRLLEKGYTVRGTVRNPVDPKNDHLRALDG 314
G G+TVCVTGA G+IASWLVK LLEKGYTV+GTVRNP DPKN HL+ALDG
Sbjct: 378 GNGQTVCVTGAAGYIASWLVKMLLEKGYTVKGTVRNPDDPKNAHLKALDG 527
Score = 67.0 bits (140), Expect = 7e-010
Identities = 30/43 (69%), Positives = 32/43 (74%)
Frame = -2 / -3
Query: 292 SFFGSTGFLTVPRTV*PFSRRRLTSQEAMNPPAPVTQTVRPCP 164
+FFGS+GFLTVP TV PFS LTS EAM P APVT TV P P
Sbjct: 505 AFFGSSGFLTVPLTVYPFSSSILTSHEAMYPAAPVTHTVCPFP 377
Score = 42.3 bits (86), Expect = 0.019
Identities = 21/45 (46%), Positives = 29/45 (64%)
Frame = -1 / -2
Query: 314 AVKGPQVVVLWIHRVPDRAADCVALLQEALDEPGGNEPSSSGHAN 180
AV+ +V VL + VPD A D V+LL++ LDEP G P +G A+
Sbjct: 527 AVQRLEVRVLRVIWVPDGALDSVSLLEQHLDEPRGYVPGRAGDAH 393
Score = 34.5 bits (69), Expect = 4.1
Identities = 14/25 (56%), Positives = 16/25 (64%)
Frame = +2 / +2
Query: 200 RVHCLLARQAPPGEGLHSPRHGQEP 274
RVH L+ARQ EG+H H QEP
Sbjct: 413 RVHSLVARQDAAREGIHCQGHRQEP 487
>gb|BE599908.1|BE599908 PI1_77_C02.b1_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 566
Score = 104 bits (222), Expect = 3e-021
Identities = 41/50 (82%), Positives = 45/50 (90%)
Frame = +3 / +2
Query: 165 GQGRTVCVTGAGGFIASWLVKRLLEKGYTVRGTVRNPVDPKNDHLRALDG 314
G G+TVCVTGA G+IASWLVK LLEKGYTV+GTVRNP DPKN HL+ALDG
Sbjct: 383 GNGQTVCVTGAAGYIASWLVKMLLEKGYTVKGTVRNPDDPKNAHLKALDG 532
Score = 67.0 bits (140), Expect = 7e-010
Identities = 30/43 (69%), Positives = 32/43 (74%)
Frame = -2 / -3
Query: 292 SFFGSTGFLTVPRTV*PFSRRRLTSQEAMNPPAPVTQTVRPCP 164
+FFGS+GFLTVP TV PFS LTS EAM P APVT TV P P
Sbjct: 510 AFFGSSGFLTVPLTVYPFSSSILTSHEAMYPAAPVTHTVCPFP 382
Score = 51.9 bits (107), Expect = 2e-005
Identities = 25/56 (44%), Positives = 36/56 (64%)
Frame = -1 / -2
Query: 347 VGAEEDETVDGAVKGPQVVVLWIHRVPDRAADCVALLQEALDEPGGNEPSSSGHAN 180
VG ED+ + AV+ +V VL + VPD A D V+LL++ LDEP G+ P +G A+
Sbjct: 565 VGLAEDQPLGRAVQRLEVRVLRVIWVPDGALDSVSLLEQHLDEPRGDVPGRAGDAH 398
Score = 33.6 bits (67), Expect = 7.8
Identities = 14/25 (56%), Positives = 16/25 (64%)
Frame = +2 / +1
Query: 200 RVHCLLARQAPPGEGLHSPRHGQEP 274
RVH L+ARQ EG+H H QEP
Sbjct: 418 RVHRLVARQDAAREGIHCQGHRQEP 492
>gb|CD228754.1|CD228754 CCC1_9_E11.g1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_9_E11_A007 5', mRNA sequence
Length = 597
Score = 104 bits (222), Expect = 3e-021
Identities = 41/50 (82%), Positives = 45/50 (90%)
Frame = +3 / +1
Query: 165 GQGRTVCVTGAGGFIASWLVKRLLEKGYTVRGTVRNPVDPKNDHLRALDG 314
G G+TVCVTGA G+IASWLVK LLEKGYTV+GTVRNP DPKN HL+ALDG
Sbjct: 376 GNGQTVCVTGAAGYIASWLVKMLLEKGYTVKGTVRNPDDPKNAHLKALDG 525
Score = 67.0 bits (140), Expect = 7e-010
Identities = 30/43 (69%), Positives = 32/43 (74%)
Frame = -2 / -2
Query: 292 SFFGSTGFLTVPRTV*PFSRRRLTSQEAMNPPAPVTQTVRPCP 164
+FFGS+GFLTVP TV PFS LTS EAM P APVT TV P P
Sbjct: 503 AFFGSSGFLTVPLTVYPFSSSILTSHEAMYPAAPVTHTVCPFP 375
Score = 57.9 bits (120), Expect = 4e-007
Identities = 28/66 (42%), Positives = 41/66 (62%)
Frame = -1 / -1
Query: 377 GLGKALWVQQVGAEEDETVDGAVKGPQVVVLWIHRVPDRAADCVALLQEALDEPGGNEPS 198
G + VQ+VG ED+ + AV+ +V VL + VPD A D V+LL++ LDEP G+ P
Sbjct: 588 GAADGVVVQEVGLAEDQPLGRAVQRLEVRVLRVIWVPDGALDSVSLLEQHLDEPRGDVPG 409
Query: 197 SSGHAN 180
+G A+
Sbjct: 408 RAGDAH 391
Score = 33.6 bits (67), Expect = 7.8
Identities = 14/25 (56%), Positives = 16/25 (64%)
Frame = +2 / +3
Query: 200 RVHCLLARQAPPGEGLHSPRHGQEP 274
RVH L+ARQ EG+H H QEP
Sbjct: 411 RVHRLVARQDAAREGIHCQGHRQEP 485
>gb|CN146030.1|CN146030 WOUND1_37_A04.b1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_37_A04_A002 3', mRNA sequence
Length = 732
Score = 73.9 bits (155), Expect(2) = 4e-021
Identities = 25/58 (43%), Positives = 39/58 (67%)
Frame = +3 / +2
Query: 510 VFTSSIGTVYMNPYRDPSKPVDDTCWSDLEYCKNTQNWYCYAKTVAEQGAWEVARKRG 683
V SS+ V +NP + +D+ CWSD+E+C+ QNWYC +KT+AE A++ A++ G
Sbjct: 2 VVVSSVAAVMVNPGWPQDEVMDEACWSDVEFCRTNQNWYCLSKTLAETEAFDYAKRTG 175
Score = 52.8 bits (109), Expect(2) = 4e-021
Identities = 25/65 (38%), Positives = 33/65 (50%)
Frame = +3 / +2
Query: 816 YVHVRDVAEAHVRVYEAPHAHGRYICAESTLHRGDLCRVLAKLFPEYPVPTKCKDQVNPP 995
+V VRDVA A + VYE P A GRYIC + D+ +L +P Y TK + P
Sbjct: 305 FVDVRDVANALLLVYETPEASGRYICDANARQVSDVIALLKNWYPAYNHATKLVQVSDEP 484
Query: 996 VVGYK 1010
+ K
Sbjct: 485 LFSSK 499
Score = 39.6 bits (80), Expect = 0.13
Identities = 20/45 (44%), Positives = 25/45 (55%)
Frame = -2 / -1
Query: 952 SGKSLARTRQRSPRCRVLSAQM*RPCAWGASYTRTCASATSLTCT 818
+G + S C ++QM*RP A G SYTR+ A ATS T T
Sbjct: 441 AGYQFFSSAMTSDTCLAFASQM*RPDASGVSYTRSRALATSRTST 307
>gb|CW317850.1|CW317850 104_809_11473636_116_35860_002 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11473636, DNA
sequence
Length = 675
Score = 81.3 bits (171), Expect(2) = 1e-020
Identities = 30/59 (50%), Positives = 42/59 (71%)
Frame = +3 / +1
Query: 438 MIEPAIRGTRYVMAAADDAGVKRVVFTSSIGTVYMNPYRDPSKPVDDTCWSDLEYCKNT 614
++ A+ GTR V+ AA D G +RVVFTSS G V+M+P R P +D+TCWSD ++CK +
Sbjct: 235 LVPVAVEGTRNVINAAADEGARRVVFTSSYGAVHMDPNRSPDAVLDETCWSDYDFCKRS 411
Score = 53.8 bits (111), Expect(2) = 9e-012
Identities = 28/50 (56%), Positives = 33/50 (66%)
Frame = -2 / -2
Query: 607 LQYSRSLQQVSSTGLLGSR*GFMYTVPMEDVNTTRFTPASSAAAIT*RVP 458
LQ S SLQ VSS G R G M+T P E+V TTR P+S+AA +T RVP
Sbjct: 404 LQKS*SLQHVSSRTASGLRLGSMWTAP*EEVKTTRRAPSSAAALMTFRVP 255
Score = 44.1 bits (90), Expect(2) = 1e-020
Identities = 16/23 (69%), Positives = 20/23 (86%)
Frame = +3 / +3
Query: 363 SLAEAFSGCDGVFHAASPVTDDP 431
SL AF+GC+GVFH ASPV++DP
Sbjct: 27 SLHAAFAGCNGVFHVASPVSNDP 95
Score = 41.4 bits (84), Expect(2) = 9e-012
Identities = 16/19 (84%), Positives = 17/19 (89%)
Frame = -1 / -2
Query: 431 RVIGDRGGGVEDAVTAGEG 375
RV+GDRGG VEDAV AGEG
Sbjct: 95 RVVGDRGGDVEDAVAAGEG 39
Score = 34.5 bits (69), Expect = 4.1
Identities = 13/18 (72%), Positives = 14/18 (77%)
Frame = -2 / -3
Query: 418 TGEAAWKTPSQPEKASAR 365
TGEA WKTP QP KA+ R
Sbjct: 82 TGEATWKTPLQPAKAAWR 29
>gb|CW180919.1|CW180919 104_595_11163212_148_36646_070 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11163212, DNA
sequence
Length = 706
Score = 69.3 bits (145), Expect(3) = 1e-020
Identities = 29/64 (45%), Positives = 38/64 (59%)
Frame = +3 / +3
Query: 438 MIEPAIRGTRYVMAAADDAGVKRVVFTSSIGTVYMNPYRDPSKPVDDTCWSDLEYCKNTQ 617
++EPA++GT V+ AA D GV RVV SS + NP P K +DD CW+D+E K Q
Sbjct: 30 LLEPAVKGTLNVLRAAKDCGVGRVVLMSSQAAMVPNPNWPPGKVIDDDCWADVELLKKLQ 209
Query: 618 NWYC 629
C
Sbjct: 210 VINC 221
Score = 39.1 bits (79), Expect(3) = 1e-020
Identities = 15/28 (53%), Positives = 20/28 (71%)
Frame = +3 / +2
Query: 819 VHVRDVAEAHVRVYEAPHAHGRYICAES 902
V VRDVA + + +YE P A GR++C ES
Sbjct: 617 VDVRDVAHSLIMLYENPSAQGRHLCMES 700
Score = 36.3 bits (73), Expect(3) = 1e-020
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = +3 / +1
Query: 603 CKNTQNWYCYAKTVAEQGAWEVARK 677
C Q WY +KT+AE+ AW+ A K
Sbjct: 295 CSELQLWYSVSKTLAEKAAWDFAEK 369
>gb|CB926819.1|CB926819 ABA1_10_G05.g1_A012 Abscisic acid-treated seedlings Sorghum bicolor
cDNA clone ABA1_10_G05_A012 5', mRNA sequence
Length = 549
Score = 56.5 bits (117), Expect(3) = 2e-020
Identities = 23/39 (58%), Positives = 26/39 (66%)
Frame = +3 / +1
Query: 165 GQGRTVCVTGAGGFIASWLVKRLLEKGYTVRGTVRNPVD 281
G VCVTG GFI SWLV+ LL +GYTV TV+N D
Sbjct: 139 GGSSLVCVTGGSGFIGSWLVRLLLGRGYTVHATVKNLQD 255
Score = 45.5 bits (93), Expect(2) = 9e-007
Identities = 22/31 (70%), Positives = 22/31 (70%)
Frame = -2 / -2
Query: 271 FLTVPRTV*PFSRRRLTSQEAMNPPAPVTQT 179
FLTV TV*P RRR TSQE M P PVTQT
Sbjct: 245 FLTVAWTV*PRPRRRRTSQEPMKPLPPVTQT 153
Score = 42.8 bits (87), Expect(3) = 2e-020
Identities = 19/42 (45%), Positives = 25/42 (59%)
Frame = +3 / +1
Query: 423 DDPEMMIEPAIRGTRYVMAAADDAGVKRVVFTSSIGTVYMNP 548
D ++EPA++GT V+ AA D GV RVV SS + NP
Sbjct: 415 DPENELVEPALKGTLSVLRAAKDCGVGRVVMVSSQTAMVPNP 540
Score = 39.6 bits (80), Expect(3) = 2e-020
Identities = 17/47 (36%), Positives = 22/47 (46%)
Frame = +3 / +1
Query: 279 DPKNDHLRALDGXXXXXXXXXXXXXXPQSLAEAFSGCDGVFHAASPV 419
+ + HL+A+DG P S+ A G GVFH ASPV
Sbjct: 256 ESETKHLQAMDGANSRLRLFQMDLLEPASIRPAVEGARGVFHVASPV 396
Score = 38.2 bits (77), Expect = 0.32
Identities = 16/27 (59%), Positives = 17/27 (62%)
Frame = +2 / +3
Query: 200 RVHCLLARQAPPGEGLHSPRHGQEPCG 280
R+H LLAR P LH PRH QEP G
Sbjct: 174 RLHRLLARPPPSRSRLHRPRHRQEPPG 254
Score = 29.5 bits (58), Expect(2) = 9e-007
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = -2 / -2
Query: 421 VTGEAAWKTPSQPEKASARLCG 356
+TGEA WKTP P A G
Sbjct: 398 MTGEATWKTPRAPSTAGRMEAG 333
>gb|CX612381.1|CX612381 GABR1_2_D06.b1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_2_D06_A002 3', mRNA sequence
Length = 636
Score = 79.4 bits (167), Expect(3) = 3e-020
Identities = 28/52 (53%), Positives = 38/52 (73%)
Frame = +3 / +1
Query: 900 STLHRGDLCRVLAKLFPEYPVPTKCKDQVNPPVVGYKFTNQRLKDLGMDFVP 1055
+ LHR D+ R L K FP+YPVP +C D+VNP YK +NQ+L+DLG++F P
Sbjct: 37 AVLHREDVVRTLRKFFPDYPVPERCSDEVNPRKQPYKISNQKLRDLGLEFTP 192
Score = 46.4 bits (95), Expect(2) = 2e-006
Identities = 25/52 (48%), Positives = 27/52 (51%)
Frame = -2 / -2
Query: 1066 ALQTGTKSIPRSLSLWLVNLYPTTGGLTWSLHLVGTGYSGKSLARTRQRSPR 911
A G S P+SLS WL LY G T S HL GTG SGK+L S R
Sbjct: 203 ACAAGVNSKPKSLSFWLDILYGCFLGFTSSEHLSGTG*SGKNLRSVLTTSSR 48
Score = 37.3 bits (75), Expect = 0.61
Identities = 22/55 (40%), Positives = 31/55 (56%)
Frame = -1 / -1
Query: 1070 RGTADRHEVHPQILEPLVGELVSYHRRVNLVLALGGYGVLREELGEDAAEVAAVQ 906
+G R E+ Q+ + LVG LV V+L+ A GV+REEL E +V AV+
Sbjct: 207 QGLRRRRELQAQVPQLLVGYLVRLLPWVHLIRAPFRDGVVREELAERPDDVLAVE 43
Score = 29.5 bits (58), Expect(3) = 3e-020
Identities = 9/18 (50%), Positives = 14/18 (77%)
Frame = +2 / +1
Query: 1061 QCLYETVTSLQEKGMLPV 1114
Q LY+T+ QEKG++P+
Sbjct: 199 QALYDTIICFQEKGIIPI 252
Score = 29.5 bits (58), Expect(3) = 3e-020
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = +3 / +1
Query: 867 PHAHGRYICAESTL 908
PHA GRYICAE +
Sbjct: 1 PHAAGRYICAEGAV 42
Score = 27.2 bits (53), Expect(2) = 2e-006
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = -3 / -2
Query: 1110 GSMPFSWRLVTVS*RHC 1060
G MPFSW+ + VS R C
Sbjct: 248 GMMPFSWKHMMVSYRAC 198
>gb|CB925013.1|CB925013 ABA1_29_B06.g1_A012 Abscisic acid-treated seedlings Sorghum bicolor
cDNA clone ABA1_29_B06_A012 5', mRNA sequence
Length = 642
Score = 101 bits (215), Expect = 3e-020
Identities = 43/86 (50%), Positives = 52/86 (60%)
Frame = +3 / +1
Query: 171 GRTVCVTGAGGFIASWLVKRLLEKGYTVRGTVRNPVDPKNDHLRALDGXXXXXXXXXXXX 350
G TVCVTGAGGFIASWLVK LL +GYTV GTVR+ D K +HL+ L+
Sbjct: 373 GTTVCVTGAGGFIASWLVKLLLSRGYTVHGTVRDLSDEKTNHLKRLENAAGNLRIFKADL 552
Query: 351 XXPQSLAEAFSGCDGVFHAASPVTDD 428
++A A GC GV H A+PV +
Sbjct: 553 LDYDAMAAAVVGCQGVLHVATPVPSE 630
Score = 56.5 bits (117), Expect(2) = 8e-009
Identities = 26/42 (61%), Positives = 26/42 (61%)
Frame = -2 / -2
Query: 295 WSFFGSTGFLTVPRTV*PFSRRRLTSQEAMNPPAPVTQTVRP 170
W F S TVP TV*P R TS EAMNPPAPVT TV P
Sbjct: 497 WFVFSSLRSRTVPCTV*PRESRSFTSHEAMNPPAPVTHTVVP 372
Score = 48.3 bits (99), Expect = 3e-004
Identities = 24/77 (31%), Positives = 41/77 (53%)
Frame = -1 / -1
Query: 410 GGVEDAVTAGEGLGKALWVQQVGAEEDETVDGAVKGPQVVVLWIHRVPDRAADCVALLQE 231
G +E+++ + + VQQ+ E E ++ Q+V L + V D A VA ++
Sbjct: 612 GHMENSLAPDDRSCHGVVVQQISLENPEVSGSILQALQMVRLLVTEVADGAVHGVAAGEQ 433
Query: 230 ALDEPGGNEPSSSGHAN 180
L EP G+EP+ +GHA+
Sbjct: 432 ELHEPRGDEPAGAGHAH 382
Score = 25.4 bits (49), Expect(2) = 8e-009
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = -2 / -2
Query: 418 TGEAAWKTPSQPEKASA 368
TG A W+TP P A+A
Sbjct: 620 TGVATWRTPWHPTTAAA 570
>gb|CF428507.1|CF428507 PH1_15_D07.g1_A002 Phosphorous-deficient seedlings Sorghum bicolor
cDNA clone PH1_15_D07_A002 5', mRNA sequence
Length = 623
Score = 100 bits (214), Expect = 4e-020
Identities = 43/83 (51%), Positives = 51/83 (61%)
Frame = +3 / +2
Query: 171 GRTVCVTGAGGFIASWLVKRLLEKGYTVRGTVRNPVDPKNDHLRALDGXXXXXXXXXXXX 350
G TVCVTGAGGFIASWLVK LL +GYTV GTVR+ D K +HL+ L+
Sbjct: 368 GTTVCVTGAGGFIASWLVKLLLSRGYTVHGTVRDLSDEKTNHLKRLENAAGNLRIFKADL 547
Query: 351 XXPQSLAEAFSGCDGVFHAASPV 419
++A A GC GV H A+PV
Sbjct: 548 LDYDAMAAAVVGCQGVLHVATPV 616
Score = 56.5 bits (117), Expect(2) = 8e-009
Identities = 26/42 (61%), Positives = 26/42 (61%)
Frame = -2 / -3
Query: 295 WSFFGSTGFLTVPRTV*PFSRRRLTSQEAMNPPAPVTQTVRP 170
W F S TVP TV*P R TS EAMNPPAPVT TV P
Sbjct: 492 WFVFSSLRSRTVPCTV*PRESRSFTSHEAMNPPAPVTHTVVP 367
Score = 48.3 bits (99), Expect = 3e-004
Identities = 24/77 (31%), Positives = 41/77 (53%)
Frame = -1 / -2
Query: 410 GGVEDAVTAGEGLGKALWVQQVGAEEDETVDGAVKGPQVVVLWIHRVPDRAADCVALLQE 231
G +E+++ + + VQQ+ E E ++ Q+V L + V D A VA ++
Sbjct: 607 GHMENSLAPDDRSCHGVVVQQISLENPEVSGSILQALQMVRLLVTEVADGAVHGVAAGEQ 428
Query: 230 ALDEPGGNEPSSSGHAN 180
L EP G+EP+ +GHA+
Sbjct: 427 ELHEPRGDEPAGAGHAH 377
Score = 25.4 bits (49), Expect(2) = 8e-009
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = -2 / -3
Query: 418 TGEAAWKTPSQPEKASA 368
TG A W+TP P A+A
Sbjct: 615 TGVATWRTPWHPTTAAA 565
>gb|CX608598.1|CX608598 ANR1_39_C06.g1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_39_C06_A002 5', mRNA sequence
Length = 610
Score = 100 bits (214), Expect = 4e-020
Identities = 40/50 (80%), Positives = 44/50 (88%)
Frame = +3 / +2
Query: 165 GQGRTVCVTGAGGFIASWLVKRLLEKGYTVRGTVRNPVDPKNDHLRALDG 314
G G+TVCVTGA G+IASWLVK LLEKGYTV+GTVRNP DPKN HL AL+G
Sbjct: 416 GNGQTVCVTGAAGYIASWLVKMLLEKGYTVKGTVRNPDDPKNAHLMALNG 565
Score = 67.0 bits (140), Expect = 7e-010
Identities = 30/43 (69%), Positives = 32/43 (74%)
Frame = -2 / -2
Query: 292 SFFGSTGFLTVPRTV*PFSRRRLTSQEAMNPPAPVTQTVRPCP 164
+FFGS+GFLTVP TV PFS LTS EAM P APVT TV P P
Sbjct: 543 AFFGSSGFLTVPLTVYPFSSSILTSHEAMYPAAPVTHTVCPFP 415
Score = 54.7 bits (113), Expect = 4e-006
Identities = 26/59 (44%), Positives = 38/59 (64%)
Frame = -1 / -1
Query: 356 VQQVGAEEDETVDGAVKGPQVVVLWIHRVPDRAADCVALLQEALDEPGGNEPSSSGHAN 180
VQ+VG ED+ + AV+ +V VL + VPD A D V+LL++ LDEP G+ +G A+
Sbjct: 607 VQEVGLAEDQPIGRAVQRHEVRVLRVIWVPDGALDSVSLLEQHLDEPRGDVSGRAGDAH 431
>gb|BZ351615.1|BZ351615 hw04e11.g1 WGS-SbicolorF (JM107 adapted methyl filtered) Sorghum
bicolor genomic clone hw04e11 5', DNA sequence
Length = 624
Score = 53.3 bits (110), Expect(4) = 7e-020
Identities = 22/44 (50%), Positives = 25/44 (56%)
Frame = +3 / -2
Query: 828 RDVAEAHVRVYEAPHAHGRYICAESTLHRGDLCRVLAKLFPEYP 959
R A AHV YE P A GRY+C + LHR L +L LFP P
Sbjct: 470 RXRARAHVLAYERPAARGRYLCIGTVLHRAQLVAMLRDLFPXVP 339
Score = 45.1 bits (92), Expect(4) = 7e-020
Identities = 15/30 (50%), Positives = 23/30 (76%)
Frame = +3 / -1
Query: 969 KCKDQVNPPVVGYKFTNQRLKDLGMDFVPV 1058
+C+D P V Y+F+NQRL+DLG++F P+
Sbjct: 207 RCEDDGKPMVKPYRFSNQRLRDLGLEFTPL 118
Score = 40.9 bits (83), Expect(3) = 7e-007
Identities = 19/30 (63%), Positives = 20/30 (66%)
Frame = -2 / +2
Query: 1057 TGTKSIPRSLSLWLVNLYPTTGGLTWSLHL 968
+G S PRSLSLWL NLY T GL S HL
Sbjct: 119 SGVNSKPRSLSLWLENLYGFTIGLPSSSHL 208
Score = 35.0 bits (70), Expect(4) = 7e-020
Identities = 14/23 (60%), Positives = 17/23 (73%)
Frame = +2 / -1
Query: 1061 QCLYETVTSLQEKGMLPVLPTKQ 1129
+ LYETV LQ+KG LPV+ KQ
Sbjct: 114 ESLYETVVCLQQKGHLPVIKQKQ 46
Score = 34.1 bits (68), Expect(3) = 7e-007
Identities = 18/39 (46%), Positives = 21/39 (53%)
Frame = -1 / +3
Query: 959 GVLREELGEDAAEVAAVQGALGADVAAVRVGRLVHPDVR 843
G EE+ E E+ AVQ A+V A R G LV DVR
Sbjct: 339 GYXGEEVPEHGDELCAVQHGADAEVPAARGGALVGEDVR 455
Score = 30.4 bits (60), Expect(2) = 0.15
Identities = 17/43 (39%), Positives = 18/43 (41%)
Frame = -2 / +1
Query: 958 GYSGKSLARTRQRSPRCRVLSAQM*RPCAWGASYTRTCASATS 830
G GK RC + Q RP A G S RTCA A S
Sbjct: 340 GTXGKRSLSMATSCARCSTVPMQRYRPRAAGRS*ARTCARARS 468
Score = 29.5 bits (58), Expect(2) = 0.15
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = -1 / +1
Query: 1055 RHEVHPQILEPLVGELVSYHRRVNLVLA 972
R E Q+ EPLVGE V H + +V A
Sbjct: 121 RSEFQAQVSEPLVGEPVRLHHWLTVVFA 204
Score = 26.3 bits (51), Expect(4) = 7e-020
Identities = 8/23 (34%), Positives = 15/23 (65%)
Frame = +3 / -1
Query: 759 HVMKYLTGSATTYVNAAQAYVHV 827
H+++Y+ G+ + NA AYV +
Sbjct: 540 HILRYVMGTKRSIPNAVAAYVDI 472
Score = 21.7 bits (41), Expect(3) = 7e-007
Identities = 10/21 (47%), Positives = 11/21 (52%)
Frame = -3 / +2
Query: 1128 CFVGSTGSMPFSWRLVTVS*R 1066
CF TG PF + TVS R
Sbjct: 47 CFCLMTGRWPFCCKHTTVSYR 109
>gb|CX608520.1|CX608520 ANR1_39_C06.b1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_39_C06_A002 3', mRNA sequence
Length = 491
Score = 84.9 bits (179), Expect(2) = 1e-019
Identities = 31/47 (65%), Positives = 40/47 (85%)
Frame = +3 / +3
Query: 918 DLCRVLAKLFPEYPVPTKCKDQVNPPVVGYKFTNQRLKDLGMDFVPV 1058
D+ R+LAKLFPEYPVPT+C D+VNP YKF+NQ+L+DLG++F PV
Sbjct: 3 DVVRILAKLFPEYPVPTRCSDEVNPRKQPYKFSNQKLRDLGLEFRPV 143
Score = 64.8 bits (135), Expect(2) = 2e-010
Identities = 30/47 (63%), Positives = 30/47 (63%)
Frame = -2 / -2
Query: 1057 TGTKSIPRSLSLWLVNLYPTTGGLTWSLHLVGTGYSGKSLARTRQRS 917
TG S PRS S W NLY G T S HLVGTGYSGKSLAR R S
Sbjct: 142 TGRNSNPRSRSFWFENLYGCFRGFTSSEHLVGTGYSGKSLARMRTTS 2
Score = 51.0 bits (105), Expect = 4e-005
Identities = 28/48 (58%), Positives = 32/48 (66%)
Frame = -1 / -1
Query: 1061 ADRHEVHPQILEPLVGELVSYHRRVNLVLALGGYGVLREELGEDAAEV 918
A R E+ Q+ E LV ELV RV+LV A GG GVL EELGEDA +V
Sbjct: 146 AHRPELQSQVPELLVRELVRLLPRVHLVGAPGGDGVLGEELGEDADDV 3
Score = 40.5 bits (82), Expect = 0.066
Identities = 18/35 (51%), Positives = 22/35 (62%)
Frame = +2 / +2
Query: 953 VPRTHQVQGPG*PSGGRIQVHQPEAQGSGDGLRAG 1057
VPR HQV G P+ +QV +PEA G G G+ AG
Sbjct: 38 VPRPHQVLRRGEPAEAAVQVLEPEAPGPGIGVPAG 142
Score = 34.1 bits (68), Expect(2) = 1e-019
Identities = 14/19 (73%), Positives = 16/19 (84%)
Frame = +2 / +3
Query: 1061 QCLYETVTSLQEKGMLPVL 1117
Q LY+TV +LQEKG LPVL
Sbjct: 147 QSLYDTVKNLQEKGHLPVL 203
Score = 23.1 bits (44), Expect(2) = 2e-010
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = -3 / -2
Query: 1116 STGSMPFSWRLVTVS* 1069
STG PFS R TVS*
Sbjct: 202 STGRWPFS*RFFTVS* 155
>gb|CF482349.1|CF482349 POL1_6_A05.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_6_A05_A002 5', mRNA sequence
Length = 782
Score = 60.6 bits (126), Expect(3) = 1e-019
Identities = 24/61 (39%), Positives = 35/61 (57%)
Frame = +3 / +2
Query: 501 KRVVFTSSIGTVYMNPYRDPSKPVDDTCWSDLEYCKNTQNWYCYAKTVAEQGAWEVARKR 680
K V+ +S Y R P VD+T ++D + C+ TQ WY +KT+AEQ AW+ +R
Sbjct: 407 KVVITSSMAAVSYNEKPRTPEVTVDETWFTDPQICEKTQQWYVLSKTLAEQAAWKFSRDN 586
Query: 681 G 683
G
Sbjct: 587 G 589
Score = 39.1 bits (79), Expect(3) = 1e-019
Identities = 15/35 (42%), Positives = 24/35 (68%)
Frame = +3 / +2
Query: 774 LTGSATTYVNAAQAYVHVRDVAEAHVRVYEAPHAH 878
L ++TY N++ +V+V+DVA AH+ YE P A+
Sbjct: 677 LINGSSTYPNSSFGWVNVKDVALAHILAYEIPSAN 781
Score = 38.2 bits (77), Expect = 0.32
Identities = 17/57 (29%), Positives = 28/57 (49%)
Frame = +3 / +2
Query: 417 VTDDPEMMIEPAIRGTRYVMAAADDAGVKRVVFTSSIGTVYMNPYRDPSKPVDDTCW 587
V D +++PA++GT V+ + A + +VV TSS+ V N + D W
Sbjct: 320 VKDPKAELLDPAVKGTLNVLGSCKKASITKVVITSSMAAVSYNEKPRTPEVTVDETW 490
Score = 36.3 bits (73), Expect(3) = 1e-019
Identities = 18/44 (40%), Positives = 18/44 (40%)
Frame = +3 / +2
Query: 285 KNDHLRALDGXXXXXXXXXXXXXXPQSLAEAFSGCDGVFHAASP 416
K HL ALDG S A GCD VFH ASP
Sbjct: 176 KTLHLTALDGAKDRLHLFKASLLEEGSFDAAVHGCDTVFHTASP 307
>gb|CW400223.1|CW400223 fsbb001f090g22f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f090g22, DNA
sequence
Length = 488
Score = 94.5 bits (200), Expect = 4e-018
Identities = 38/38 (100%), Positives = 38/38 (100%)
Frame = +3 / -3
Query: 162 SGQGRTVCVTGAGGFIASWLVKRLLEKGYTVRGTVRNP 275
SGQGRTVCVTGAGGFIASWLVKRLLEKGYTVRGTVRNP
Sbjct: 216 SGQGRTVCVTGAGGFIASWLVKRLLEKGYTVRGTVRNP 103
Score = 93.6 bits (198), Expect(2) = 1e-019
Identities = 38/38 (100%), Positives = 38/38 (100%)
Frame = -2 / +2
Query: 274 GFLTVPRTV*PFSRRRLTSQEAMNPPAPVTQTVRPCPE 161
GFLTVPRTV*PFSRRRLTSQEAMNPPAPVTQTVRPCPE
Sbjct: 104 GFLTVPRTV*PFSRRRLTSQEAMNPPAPVTQTVRPCPE 217
Score = 66.6 bits (139), Expect = 9e-010
Identities = 26/32 (81%), Positives = 29/32 (90%)
Frame = -1 / +1
Query: 275 RVPDRAADCVALLQEALDEPGGNEPSSSGHAN 180
RVPDRA DCV LL+EALD+PGG+EPSSSG AN
Sbjct: 103 RVPDRATDCVTLLEEALDKPGGDEPSSSGDAN 198
Score = 57.0 bits (118), Expect = 7e-007
Identities = 26/32 (81%), Positives = 26/32 (81%)
Frame = +1 / -1
Query: 181 FA*PELEGSLPPGSSSASWRRATQSAARSGTL 276
FA PELEGS PPG SSAS RR TQS ARSGTL
Sbjct: 197 FASPELEGSSPPGLSSASSRRVTQSVARSGTL 102
Score = 56.5 bits (117), Expect = 1e-006
Identities = 22/26 (84%), Positives = 22/26 (84%)
Frame = +2 / -2
Query: 197 WRVHCLLARQAPPGEGLHSPRHGQEP 274
WRVH LLA QAPP EGLHSP HGQEP
Sbjct: 181 WRVHRLLACQAPPREGLHSPWHGQEP 104
Score = 24.9 bits (48), Expect(2) = 1e-019
Identities = 6/6 (100%), Positives = 6/6 (100%)
Frame = -1 / +1
Query: 128 CCWHPS 111
CCWHPS
Sbjct: 247 CCWHPS 264
>gb|CL158053.1|CL158053 104_346_10803269_116_31376_245 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10803269, DNA
sequence
Length = 643
Score = 80.8 bits (170), Expect(2) = 2e-019
Identities = 31/64 (48%), Positives = 42/64 (65%)
Frame = +3 / -1
Query: 780 GSATTYVNAAQAYVHVRDVAEAHVRVYEAPHAHGRYICAESTLHRGDLCRVLAKLFPEYP 959
G+ Y NA AYV VRDVA AH+ VYE HGRY+C LH+ + +++ +LFP+YP
Sbjct: 625 GTKKAYSNAVGAYVDVRDVALAHIFVYEDLSTHGRYLCIGDMLHQSEFLQMMRELFPQYP 446
Query: 960 VPTK 971
+ TK
Sbjct: 445 ITTK 434
Score = 51.0 bits (105), Expect(2) = 6e-007
Identities = 27/59 (45%), Positives = 32/59 (54%)
Frame = -2 / +3
Query: 976 LHLVGTGYSGKSLARTRQRSPRCRVLSAQM*RPCAWGASYTRTCASATSLTCTYACAAF 800
L+LV GY GKS + S C + Q RPC +SYT+ A ATS T TYA AF
Sbjct: 429 LYLVVIGYCGKSSLII*RNSD*CSMSPMQRYRPCVLKSSYTKIWARATSRTSTYAPTAF 605
Score = 40.5 bits (82), Expect(2) = 2e-019
Identities = 15/30 (50%), Positives = 20/30 (66%)
Frame = +3 / -3
Query: 969 KCKDQVNPPVVGYKFTNQRLKDLGMDFVPV 1058
+CKD+ P + YKF+ QRL LGM F P+
Sbjct: 119 RCKDENKPMIKPYKFSTQRLVALGMKFTPL 30
Score = 27.6 bits (54), Expect(2) = 6e-007
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = -1 / +3
Query: 1055 RHEVHPQILEPLVGELVSYHRRVNLVLA 972
R E+H Q EPL GELV + +LA
Sbjct: 33 RSELHTQSNEPLCGELVRLDHWLVFILA 116
>gb|CW269378.1|CW269378 104_740_11401813_116_36229_055 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11401813, DNA
sequence
Length = 689
Score = 56.5 bits (117), Expect(3) = 2e-019
Identities = 25/53 (47%), Positives = 29/53 (54%)
Frame = +3 / +3
Query: 261 TVRNPVDPKNDHLRALDGXXXXXXXXXXXXXXPQSLAEAFSGCDGVFHAASPV 419
T+ + DPKN HL ALDG S+A A +GCDGVFH ASPV
Sbjct: 303 TICDAGDPKNAHLMALDGAAERLRLFKADLLDRASVAAAVAGCDGVFHVASPV 461
Score = 52.8 bits (109), Expect(3) = 2e-019
Identities = 19/24 (79%), Positives = 23/24 (95%)
Frame = +3 / +3
Query: 174 RTVCVTGAGGFIASWLVKRLLEKG 245
+TVCVTGAGGF+ASWLV+RLL +G
Sbjct: 69 KTVCVTGAGGFVASWLVQRLLSRG 140
Score = 40.9 bits (83), Expect(2) = 1e-007
Identities = 23/47 (48%), Positives = 27/47 (57%)
Frame = -1 / -1
Query: 419 DRGGGVEDAVTAGEGLGKALWVQQVGAEEDETVDGAVKGPQVVVLWI 279
D G VEDAV A G G A VQQ+G E + + AV+ QV VL I
Sbjct: 461 DGAGDVEDAVAASNGGGDAGTVQQIGLE*PQALRRAVQRHQVRVLGI 321
Score = 40.0 bits (81), Expect(2) = 1e-007
Identities = 16/23 (69%), Positives = 16/23 (69%)
Frame = -2 / -2
Query: 244 PFSRRRLTSQEAMNPPAPVTQTV 176
P RRR TS EA PPAPVT TV
Sbjct: 139 PLDRRRCTSHEATKPPAPVTHTV 71
Score = 34.5 bits (69), Expect(2) = 0.76
Identities = 17/47 (36%), Positives = 19/47 (40%)
Frame = -2 / -2
Query: 418 TGEAAWKTPSQPEKASARLCGXXXXXXXXXXXXXXXXXXXRWSFFGS 278
TG A WKTPSQP A+A L R +F GS
Sbjct: 460 TGLATWKTPSQPATAAATLARSSKSALNSRRRSAAPSSAIRCAFLGS 320
Score = 30.9 bits (61), Expect(3) = 2e-019
Identities = 12/30 (40%), Positives = 20/30 (66%)
Frame = +3 / +3
Query: 438 MIEPAIRGTRYVMAAADDAGVKRVVFTSSI 527
++ PA+ GT+ V+ + A V+RVV SS+
Sbjct: 597 ILAPAVTGTQNVLEGSHAANVRRVVVVSSV 686
Score = 23.1 bits (44), Expect(2) = 0.76
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = -1 / -1
Query: 233 EALDEPGGNEPSSSGHAN 180
EAL EP G+E + HA+
Sbjct: 128 EALHEPRGDEAPGARHAH 75
>gb|BM324463.1|BM324463 PIC1_31_E07.b1_A002 Pathogen-infected compatible 1 (PIC1) Sorghum
bicolor cDNA, mRNA sequence
Length = 484
Score = 46.9 bits (96), Expect(4) = 3e-019
Identities = 18/23 (78%), Positives = 19/23 (82%)
Frame = +3 / +2
Query: 177 TVCVTGAGGFIASWLVKRLLEKG 245
T CVTGAGGF+ASWLVK LL G
Sbjct: 92 TACVTGAGGFLASWLVKLLLSTG 160
Score = 39.6 bits (80), Expect(2) = 9e-007
Identities = 21/60 (35%), Positives = 33/60 (55%)
Frame = -1 / -1
Query: 422 GDRGGGVEDAVTAGEGLGKALWVQQVGAEEDETVDGAVKGPQVVVLWIHRVPDRAADCVA 243
GDR +ED +TAG+ A VQ V ++ + + G + ++ +L I +P AAD VA
Sbjct: 340 GDRARDMEDTLTAGDRGRNAAVVQHVSLDQLQPLAGVFECHKMGILAITEIPHGAADGVA 161
Score = 37.7 bits (76), Expect(4) = 3e-019
Identities = 16/35 (45%), Positives = 23/35 (65%)
Frame = +3 / +2
Query: 438 MIEPAIRGTRYVMAAADDAGVKRVVFTSSIGTVYM 542
+I PA+ GT V+ A +A VKRVV SS+ V++
Sbjct: 371 VIAPAVTGTLNVLKACHEAKVKRVVVVSSVAAVFI 475
Score = 36.3 bits (73), Expect(4) = 3e-019
Identities = 13/19 (68%), Positives = 16/19 (84%)
Frame = +3 / +2
Query: 363 SLAEAFSGCDGVFHAASPV 419
S+A A +GC+GVFH ASPV
Sbjct: 281 SVASAVAGCEGVFHVASPV 337
Score = 35.4 bits (71), Expect(2) = 9e-007
Identities = 14/27 (51%), Positives = 16/27 (59%)
Frame = -2 / -2
Query: 244 PFSRRRLTSQEAMNPPAPVTQTVRPCP 164
P + LTS +A PPAPVTQ V P
Sbjct: 159 PVESKSLTSHDARKPPAPVTQAVTTVP 79
Score = 32.7 bits (65), Expect(2) = 3.2
Identities = 13/19 (68%), Positives = 13/19 (68%)
Frame = -2 / -2
Query: 418 TGEAAWKTPSQPEKASARL 362
TG A WKTPSQP A A L
Sbjct: 336 TGLATWKTPSQPATADATL 280
Score = 30.9 bits (61), Expect(4) = 3e-019
Identities = 13/22 (59%), Positives = 15/22 (68%)
Frame = +3 / +2
Query: 246 YTVRGTVRNPVDPKNDHLRALD 311
Y VRGTVR+ D KN HL L+
Sbjct: 164 YAVRGTVRDLGDGKNAHLMTLE 229
Score = 22.1 bits (42), Expect(2) = 3.2
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = -1 / -1
Query: 236 QEALDEPGGNEPSSSGHA 183
++ LDEP E +GHA
Sbjct: 151 EQELDEPRRQEAPRAGHA 98
>gb|CW377684.1|CW377684 fsbb001f056b22f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f056b22, DNA
sequence
Length = 647
Score = 98.2 bits (208), Expect = 3e-019
Identities = 41/76 (53%), Positives = 50/76 (65%)
Frame = +3 / +3
Query: 744 NASTDHVMKYLTGSATTYVNAAQAYVHVRDVAEAHVRVYEAPHAHGRYICAESTLHRGDL 923
N ST+HV +YL G+ + NA AYV VRDVA AHV YE P A GRY+C + LHR L
Sbjct: 261 NFSTNHVARYLMGTKRSIPNAVAAYVDVRDVARAHVLAYERPSACGRYLCIGTVLHREQL 440
Query: 924 CRVLAKLFPEYPVPTK 971
+L +LFP+YPV K
Sbjct: 441 VAMLKELFPQYPVTAK 488
Score = 60.6 bits (126), Expect = 6e-008
Identities = 35/81 (43%), Positives = 39/81 (48%)
Frame = -2 / -2
Query: 973 HLVGTGYSGKSLARTRQRSPRCRVLSAQM*RPCAWGASYTRTCASATSLTCTYACAAFT* 794
+L TGY GKS RC + Q *RP A G S RTCA ATS T T A A
Sbjct: 490 YLAVTGYCGKSSLSMATSCSRCSTVPMQR*RPHALGRS*ARTCARATSRTST*AATALGM 311
Query: 793 VVADPVRYFITWSVLAFTVGC 731
P+R TW VL +V C
Sbjct: 310 ERLVPMR*RATWLVLKLSVCC 248
Score = 43.7 bits (89), Expect = 0.007
Identities = 23/43 (53%), Positives = 26/43 (60%)
Frame = -1 / -1
Query: 971 LGGYGVLREELGEDAAEVAAVQGALGADVAAVRVGRLVHPDVR 843
LG GVLREE E E+ AVQ A+VA+ R G LV DVR
Sbjct: 488 LGCDGVLREEFLEHGDELFAVQHGADAEVASARAGALVGEDVR 360
>gb|CN135147.1|CN135147 OX1_30_G11.g1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_30_G11_A002 5', mRNA sequence
Length = 773
Score = 81.7 bits (172), Expect(3) = 3e-019
Identities = 34/82 (41%), Positives = 48/82 (58%)
Frame = +3 / +1
Query: 438 MIEPAIRGTRYVMAAADDAGVKRVVFTSSIGTVYMNPYRDPSKPVDDTCWSDLEYCKNTQ 617
+++PA++GT V+ V +VV SS V NP + D++CWSD E+CK +
Sbjct: 385 VLDPAVKGT*NVLKVCSTLKVHKVVVMSSNAAVTSNPNWPQDRLKDESCWSDTEFCKEKE 564
Query: 618 NWYCYAKTVAEQGAWEVARKRG 683
+WY AKT+AEQ A E AR G
Sbjct: 565 DWYSVAKTLAEQEASEYARNNG 630
Score = 42.8 bits (87), Expect(2) = 3e-006
Identities = 24/51 (47%), Positives = 29/51 (56%)
Frame = -2 / -1
Query: 658 APCSATVLA*QYQFWVFLQYSRSLQQVSSTGLLGSR*GFMYTVPMEDVNTT 506
A CSA VLA +YQ LQ S S QQ+SS L + G T +ED+ TT
Sbjct: 605 ASCSARVLATEYQSSFSLQNSVSDQQLSSLSLS*GQFGLEVTAALEDITTT 453
Score = 35.0 bits (70), Expect(3) = 3e-019
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = +3 / +3
Query: 360 QSLAEAFSGCDGVFHAASPVTDD 428
++L A GC GVFH A+PV +D
Sbjct: 105 ETLTPAVQGCQGVFHLATPVPED 173
Score = 33.6 bits (67), Expect(2) = 3e-006
Identities = 16/47 (34%), Positives = 18/47 (38%)
Frame = -2 / -2
Query: 418 TGEAAWKTPSQPEKASARLCGXXXXXXXXXXXXXXXXXXXRWSFFGS 278
TG A WKTP P A R+ RW+FFGS
Sbjct: 163 TGVARWKTP*HP*TAGVRVSQSSTSALNRCRFSGALSSFFRWAFFGS 23
Score = 23.5 bits (45), Expect(3) = 3e-019
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = +3 / +3
Query: 279 DPKNDHLRALD 311
DPKN HL+ LD
Sbjct: 24 DPKNAHLKKLD 56
>gb|CW304703.1|CW304703 104_789_11465922_116_35702_067 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11465922, DNA
sequence
Length = 681
Score = 60.6 bits (126), Expect(2) = 5e-019
Identities = 23/39 (58%), Positives = 28/39 (71%)
Frame = +3 / -1
Query: 180 VCVTGAGGFIASWLVKRLLEKGYTVRGTVRNPVDPKNDH 296
VCVTG GG++ASWLVK LL +GY V TVR+P + H
Sbjct: 549 VCVTGGGGYVASWLVKLLLSRGYAVHATVRDPSKHAHAH 433
Score = 56.1 bits (116), Expect(2) = 5e-019
Identities = 26/60 (43%), Positives = 31/60 (51%)
Frame = +3 / -2
Query: 279 DPKNDHLRALDGXXXXXXXXXXXXXXPQSLAEAFSGCDGVFHAASPVTDDPEMMIEPAIR 458
DPKN HLR LDG +LA A +GC+GVFH ASPV D + E + R
Sbjct: 311 DPKNAHLRRLDGAPESLLLFKADVLDRDALAAAVAGCEGVFHVASPVPADKVLDPEASSR 132
Score = 41.8 bits (85), Expect(2) = 6e-007
Identities = 19/46 (41%), Positives = 29/46 (63%)
Frame = -1 / +3
Query: 416 RGGGVEDAVTAGEGLGKALWVQQVGAEEDETVDGAVKGPQVVVLWI 279
RGG VED + G+ + + V+ VG E+++ + G V+ PQV VL I
Sbjct: 174 RGGDVEDPLAPGDRGRQGVAVEHVGLEQEQALRGPVQPPQVRVLGI 311
Score = 36.8 bits (74), Expect(2) = 6e-007
Identities = 18/32 (56%), Positives = 18/32 (56%)
Frame = -2 / +2
Query: 274 GFLTVPRTV*PFSRRRLTSQEAMNPPAPVTQT 179
G TV T P RR LTS EA PP PVT T
Sbjct: 455 GSRTVACTAXPRERRSLTSHEATYPPPPVTHT 550
Score = 35.4 bits (71), Expect = 2.2
Identities = 13/18 (72%), Positives = 14/18 (77%)
Frame = -2 / +1
Query: 418 TGEAAWKTPSQPEKASAR 365
TGEA WKTPS P A+AR
Sbjct: 172 TGEATWKTPSHPATAAAR 225
>gb|CW183575.1|CW183575 104_599_11164688_148_36677_024 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11164688, DNA
sequence
Length = 689
Score = 56.5 bits (117), Expect(3) = 6e-019
Identities = 25/53 (47%), Positives = 29/53 (54%)
Frame = +3 / +3
Query: 261 TVRNPVDPKNDHLRALDGXXXXXXXXXXXXXXPQSLAEAFSGCDGVFHAASPV 419
T+ + DPKN HL ALDG S+A A +GCDGVFH ASPV
Sbjct: 303 TICDAGDPKNAHLMALDGAAERLRLFKADLLDRASVAAAVAGCDGVFHVASPV 461
Score = 52.8 bits (109), Expect(3) = 6e-019
Identities = 19/24 (79%), Positives = 23/24 (95%)
Frame = +3 / +3
Query: 174 RTVCVTGAGGFIASWLVKRLLEKG 245
+TVCVTGAGGF+ASWLV+RLL +G
Sbjct: 69 KTVCVTGAGGFVASWLVQRLLSRG 140
Score = 40.9 bits (83), Expect(2) = 1e-007
Identities = 23/47 (48%), Positives = 27/47 (57%)
Frame = -1 / -1
Query: 419 DRGGGVEDAVTAGEGLGKALWVQQVGAEEDETVDGAVKGPQVVVLWI 279
D G VEDAV A G G A VQQ+G E + + AV+ QV VL I
Sbjct: 461 DGAGDVEDAVAASNGGGDAGTVQQIGLE*PQALRRAVQRHQVRVLGI 321
Score = 40.0 bits (81), Expect(2) = 1e-007
Identities = 16/23 (69%), Positives = 16/23 (69%)
Frame = -2 / -2
Query: 244 PFSRRRLTSQEAMNPPAPVTQTV 176
P RRR TS EA PPAPVT TV
Sbjct: 139 PLDRRRCTSHEATKPPAPVTHTV 71
Score = 34.5 bits (69), Expect(2) = 0.76
Identities = 17/47 (36%), Positives = 19/47 (40%)
Frame = -2 / -2
Query: 418 TGEAAWKTPSQPEKASARLCGXXXXXXXXXXXXXXXXXXXRWSFFGS 278
TG A WKTPSQP A+A L R +F GS
Sbjct: 460 TGLATWKTPSQPATAAATLARSSKSALNSRRRSAAPSSAIRCAFLGS 320
Score = 29.5 bits (58), Expect(3) = 6e-019
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +3 / +3
Query: 438 MIEPAIRGTRYVMAAADDAGVKRVVFTSSI 527
++ PA+ GT+ V+ + A V RVV SS+
Sbjct: 597 ILAPAVTGTQNVLEGSHAANVPRVVVVSSV 686
Score = 23.1 bits (44), Expect(2) = 0.76
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = -1 / -1
Query: 233 EALDEPGGNEPSSSGHAN 180
EAL EP G+E + HA+
Sbjct: 128 EALHEPRGDEAPGARHAH 75
>gb|CN125480.1|CN125480 RHOH1_11_G11.b1_A002 Acid- and alkaline-treated roots Sorghum bicolor
cDNA clone RHOH1_11_G11_A002 3', mRNA sequence
Length = 474
Score = 82.2 bits (173), Expect(2) = 6e-019
Identities = 30/44 (68%), Positives = 38/44 (86%)
Frame = +3 / +3
Query: 927 RVLAKLFPEYPVPTKCKDQVNPPVVGYKFTNQRLKDLGMDFVPV 1058
R+LAKLFPEYPVPT+C D+VNP YKF+NQ+L+DLG++F PV
Sbjct: 3 RILAKLFPEYPVPTRCSDEVNPRKQPYKFSNQKLRDLGLEFRPV 134
Score = 63.8 bits (133), Expect(2) = 3e-010
Identities = 29/44 (65%), Positives = 29/44 (65%)
Frame = -2 / -3
Query: 1057 TGTKSIPRSLSLWLVNLYPTTGGLTWSLHLVGTGYSGKSLARTR 926
TG S PRS S W NLY G T S HLVGTGYSGKSLAR R
Sbjct: 133 TGRNSNPRSRSFWFENLYGCFRGFTSSEHLVGTGYSGKSLARMR 2
Score = 47.3 bits (97), Expect = 6e-004
Identities = 26/45 (57%), Positives = 29/45 (64%)
Frame = -1 / -2
Query: 1061 ADRHEVHPQILEPLVGELVSYHRRVNLVLALGGYGVLREELGEDA 927
A R E+ Q+ E LV ELV RV+LV GG GVL EELGEDA
Sbjct: 137 AHRPELQSQVPELLVRELVRLLPRVHLVGTPGGDGVLGEELGEDA 3
Score = 40.0 bits (81), Expect = 0.091
Identities = 18/35 (51%), Positives = 22/35 (62%)
Frame = +2 / +2
Query: 953 VPRTHQVQGPG*PSGGRIQVHQPEAQGSGDGLRAG 1057
VPR HQV G P+ +QV +PEA G G G+ AG
Sbjct: 29 VPRPHQVFRRGEPAEAAVQVLEPEAPGPGIGVPAG 133
Score = 34.1 bits (68), Expect(2) = 6e-019
Identities = 14/19 (73%), Positives = 16/19 (84%)
Frame = +2 / +3
Query: 1061 QCLYETVTSLQEKGMLPVL 1117
Q LY+TV +LQEKG LPVL
Sbjct: 138 QSLYDTVKNLQEKGHLPVL 194
Score = 23.1 bits (44), Expect(2) = 3e-010
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = -3 / -3
Query: 1116 STGSMPFSWRLVTVS* 1069
STG PFS R TVS*
Sbjct: 193 STGRWPFS*RFFTVS* 146
>gb|CB927052.1|CB927052 ABA1_13_F08.b1_A012 Abscisic acid-treated seedlings Sorghum bicolor
cDNA clone ABA1_13_F08_A012 3', mRNA sequence
Length = 472
Score = 82.2 bits (173), Expect(2) = 6e-019
Identities = 30/44 (68%), Positives = 38/44 (86%)
Frame = +3 / +3
Query: 927 RVLAKLFPEYPVPTKCKDQVNPPVVGYKFTNQRLKDLGMDFVPV 1058
R+LAKLFPEYPVPT+C D+VNP YKF+NQ+L+DLG++F PV
Sbjct: 3 RILAKLFPEYPVPTRCSDEVNPRKQPYKFSNQKLRDLGLEFRPV 134
Score = 63.8 bits (133), Expect(2) = 3e-010
Identities = 29/44 (65%), Positives = 29/44 (65%)
Frame = -2 / -1
Query: 1057 TGTKSIPRSLSLWLVNLYPTTGGLTWSLHLVGTGYSGKSLARTR 926
TG S PRS S W NLY G T S HLVGTGYSGKSLAR R
Sbjct: 133 TGRNSNPRSRSFWFENLYGCFRGFTSSEHLVGTGYSGKSLARMR 2
Score = 49.2 bits (101), Expect = 2e-004
Identities = 27/45 (60%), Positives = 30/45 (66%)
Frame = -1 / -3
Query: 1061 ADRHEVHPQILEPLVGELVSYHRRVNLVLALGGYGVLREELGEDA 927
A R E+ Q+ E LV ELV RV+LV A GG GVL EELGEDA
Sbjct: 137 AHRPELQSQVPELLVRELVRLLPRVHLVGAPGGDGVLGEELGEDA 3
Score = 40.5 bits (82), Expect = 0.066
Identities = 18/35 (51%), Positives = 22/35 (62%)
Frame = +2 / +2
Query: 953 VPRTHQVQGPG*PSGGRIQVHQPEAQGSGDGLRAG 1057
VPR HQV G P+ +QV +PEA G G G+ AG
Sbjct: 29 VPRPHQVLRRGEPAEAAVQVLEPEAPGPGIGVPAG 133
Score = 34.1 bits (68), Expect(2) = 6e-019
Identities = 14/19 (73%), Positives = 16/19 (84%)
Frame = +2 / +3
Query: 1061 QCLYETVTSLQEKGMLPVL 1117
Q LY+TV +LQEKG LPVL
Sbjct: 138 QSLYDTVKNLQEKGHLPVL 194
Score = 23.1 bits (44), Expect(2) = 3e-010
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = -3 / -1
Query: 1116 STGSMPFSWRLVTVS* 1069
STG PFS R TVS*
Sbjct: 193 STGRWPFS*RFFTVS* 146
>gb|CW152652.1|CW152652 104_554_11144606_148_37482_063 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11144606, DNA
sequence
Length = 678
Score = 59.7 bits (124), Expect(2) = 8e-019
Identities = 24/35 (68%), Positives = 26/35 (74%)
Frame = +3 / -3
Query: 180 VCVTGAGGFIASWLVKRLLEKGYTVRGTVRNPVDP 284
VCVTGAGGFI SW+VK LL +GY VRGT R P
Sbjct: 544 VCVTGAGGFIGSWIVKILLARGYAVRGTSRRAGTP 440
Score = 59.3 bits (123), Expect(2) = 8e-019
Identities = 26/53 (49%), Positives = 28/53 (52%)
Frame = +3 / -1
Query: 273 PVDPKNDHLRALDGXXXXXXXXXXXXXXPQSLAEAFSGCDGVFHAASPVTDDP 431
P DPKN HL ALDG SL AF GCDGV H ASP+ D+P
Sbjct: 267 PDDPKNAHLWALDGAAERLTMLQVDLLDRASLRAAFRGCDGVIHTASPMHDNP 109
Score = 40.9 bits (83), Expect(2) = 1e-007
Identities = 22/50 (44%), Positives = 30/50 (60%)
Frame = -1 / +1
Query: 428 VIGDRGGGVEDAVTAGEGLGKALWVQQVGAEEDETVDGAVKGPQVVVLWI 279
V+ R GGV+DAV A E +A V+QV + E + AV+ PQV VL +
Sbjct: 112 VVVHRRGGVDDAVAAAECGAEAGTVEQVHLQHGEALRRAVERPQVRVLGV 261
Score = 40.0 bits (81), Expect(2) = 1e-007
Identities = 17/28 (60%), Positives = 19/28 (67%)
Frame = -2 / +3
Query: 262 VPRTV*PFSRRRLTSQEAMNPPAPVTQT 179
VPRT P +RR LT + M PPAPVT T
Sbjct: 462 VPRTAYPRARRILTIHDPMKPPAPVTHT 545
Score = 37.3 bits (75), Expect = 0.61
Identities = 17/48 (35%), Positives = 20/48 (41%)
Frame = -2 / +2
Query: 415 GEAAWKTPSQPEKASARLCGXXXXXXXXXXXXXXXXXXXRWSFFGSTG 272
GEA W TPSQP A+ RL R +F GS+G
Sbjct: 125 GEAVWMTPSQPRNAARRLARSSRSTCSMVRRSAAPSSAHRCAFLGSSG 268
>gb|CW332608.1|CW332608 104_830_11481507_116_36036_010 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11481507, DNA
sequence
Length = 712
Score = 68.0 bits (142), Expect(2) = 1e-018
Identities = 25/60 (41%), Positives = 39/60 (65%)
Frame = +3 / -1
Query: 438 MIEPAIRGTRYVMAAADDAGVKRVVFTSSIGTVYMNPYRDPSKPVDDTCWSDLEYCKNTQ 617
++ PA+ GT V+ A+ +A VKRVV SS+ V +NP + +D+ CWSD+E+C+ Q
Sbjct: 319 LLAPAVTGTMNVLKASSEAKVKRVVVVSSVAAVMVNPGWPQDEVMDEACWSDVEFCRTNQ 140
Score = 50.6 bits (104), Expect(2) = 1e-018
Identities = 22/47 (46%), Positives = 25/47 (53%)
Frame = +3 / -3
Query: 279 DPKNDHLRALDGXXXXXXXXXXXXXXPQSLAEAFSGCDGVFHAASPV 419
D KN HL A+DG S+A A +GCDGVFH ASPV
Sbjct: 596 DAKNAHLAAMDGAAARLRLFRADLLDYGSVAAAVAGCDGVFHVASPV 456
Score = 46.9 bits (96), Expect = 8e-004
Identities = 25/48 (52%), Positives = 29/48 (60%)
Frame = -1 / +3
Query: 422 GDRGGGVEDAVTAGEGLGKALWVQQVGAEEDETVDGAVKGPQVVVLWI 279
GD G VEDAV AG+G A VQQVG E+ + GAV QV VL +
Sbjct: 453 GDWGRDVEDAVAAGDGRRHAAVVQQVGPEQAQPGRGAVHRRQVRVLGV 596
Score = 35.4 bits (71), Expect = 2.2
Identities = 13/19 (68%), Positives = 15/19 (78%)
Frame = -2 / +1
Query: 418 TGEAAWKTPSQPEKASARL 362
TG+A WKTPSQP A+A L
Sbjct: 457 TGDATWKTPSQPATAAATL 513
>gb|BM328785.1|BM328785 PIC1_26_E07.g1_A002 Pathogen-infected compatible 1 (PIC1) Sorghum
bicolor cDNA, mRNA sequence
Length = 610
Score = 59.7 bits (124), Expect(2) = 2e-018
Identities = 28/73 (38%), Positives = 40/73 (54%)
Frame = +3 / +1
Query: 744 NASTDHVMKYLTGSATTYVNAAQAYVHVRDVAEAHVRVYEAPHAHGRYICAESTLHRGDL 923
NAS +++ L G + V VRDVA + + +YE P A GR++C ES DL
Sbjct: 178 NASLRLLLQILGGERIDLDDIYMGCVDVRDVAHSLIMLYENPSAQGRHLCMESAERLVDL 357
Query: 924 CRVLAKLFPEYPV 962
+A L+PE+PV
Sbjct: 358 ANKIADLYPEHPV 396
Score = 55.1 bits (114), Expect(2) = 2e-018
Identities = 18/36 (50%), Positives = 25/36 (69%)
Frame = +3 / +1
Query: 570 VDDTCWSDLEYCKNTQNWYCYAKTVAEQGAWEVARK 677
+DD CW+D+E K Q WY +KT+AE+ AW+ A K
Sbjct: 4 IDDDCWADVELLKKLQLWYSVSKTLAEKAAWDFAEK 111
>gb|CL161050.1|CL161050 104_352_10805442_116_31827_114 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10805442, DNA
sequence
Length = 668
Score = 66.1 bits (138), Expect(2) = 2e-018
Identities = 25/60 (41%), Positives = 38/60 (63%)
Frame = +3 / -3
Query: 438 MIEPAIRGTRYVMAAADDAGVKRVVFTSSIGTVYMNPYRDPSKPVDDTCWSDLEYCKNTQ 617
++ PA+ GT V+ A +A VKRVV SS+ V + P D K +D+ CWSD+ +C+ T+
Sbjct: 240 LVAPAVTGTMNVLRACSEAEVKRVVVVSSLSAVMIKPEWDECKVMDEGCWSDVGHCRTTE 61
Score = 52.4 bits (108), Expect = 2e-005
Identities = 24/50 (48%), Positives = 33/50 (66%)
Frame = -1 / +1
Query: 428 VIGDRGGGVEDAVTAGEGLGKALWVQQVGAEEDETVDGAVKGPQVVVLWI 279
++GDR G VEDAV A +G A V+QVG E+ + + GAV+ QV VL +
Sbjct: 415 IVGDRAGDVEDAVAACDGRRHAAGVEQVGLEQAQPLRGAVQRQQVRVLGV 564
Score = 51.5 bits (106), Expect(2) = 2e-018
Identities = 23/49 (46%), Positives = 25/49 (51%)
Frame = +3 / -3
Query: 279 DPKNDHLRALDGXXXXXXXXXXXXXXPQSLAEAFSGCDGVFHAASPVTD 425
D KN HL ALDG S+A A +GCDGVFH A PV D
Sbjct: 564 DAKNAHLLALDGAAERLRLFKADLLDSGSVAAAVAGCDGVFHVACPVPD 418
Score = 35.4 bits (71), Expect = 2.2
Identities = 13/19 (68%), Positives = 15/19 (78%)
Frame = -2 / +2
Query: 418 TGEAAWKTPSQPEKASARL 362
TG+A WKTPSQP A+A L
Sbjct: 425 TGQATWKTPSQPATAAATL 481
>gb|CW494628.1|CW494628 fsbb001f286a06f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f286a06, DNA
sequence
Length = 752
Score = 66.1 bits (138), Expect(2) = 2e-018
Identities = 25/60 (41%), Positives = 38/60 (63%)
Frame = +3 / -1
Query: 438 MIEPAIRGTRYVMAAADDAGVKRVVFTSSIGTVYMNPYRDPSKPVDDTCWSDLEYCKNTQ 617
++ PA+ GT V+ A +A VKRVV SS+ V + P D K +D+ CWSD+ +C+ T+
Sbjct: 365 LVAPAVTGTMNVLRACSEAEVKRVVVVSSLSAVMIKPEWDECKVMDEGCWSDVGHCRTTE 186
Score = 52.4 bits (108), Expect = 2e-005
Identities = 24/50 (48%), Positives = 33/50 (66%)
Frame = -1 / +3
Query: 428 VIGDRGGGVEDAVTAGEGLGKALWVQQVGAEEDETVDGAVKGPQVVVLWI 279
++GDR G VEDAV A +G A V+QVG E+ + + GAV+ QV VL +
Sbjct: 540 IVGDRAGDVEDAVAACDGRRHAAGVEQVGLEQAQPLRGAVQRQQVRVLGV 689
Score = 51.5 bits (106), Expect(2) = 2e-018
Identities = 23/49 (46%), Positives = 25/49 (51%)
Frame = +3 / -1
Query: 279 DPKNDHLRALDGXXXXXXXXXXXXXXPQSLAEAFSGCDGVFHAASPVTD 425
D KN HL ALDG S+A A +GCDGVFH A PV D
Sbjct: 689 DAKNAHLLALDGAAERLRLFKADLLDSGSVAAAVAGCDGVFHVACPVPD 543
Score = 35.4 bits (71), Expect = 2.2
Identities = 13/19 (68%), Positives = 15/19 (78%)
Frame = -2 / +1
Query: 418 TGEAAWKTPSQPEKASARL 362
TG+A WKTPSQP A+A L
Sbjct: 550 TGQATWKTPSQPATAAATL 606
>gb|CD206390.1|CD206390 HS1_22_H01.g1_A012 Heat-shocked seedlings Sorghum bicolor cDNA
clone HS1_22_H01_A012 5', mRNA sequence
Length = 592
Score = 93.6 bits (198), Expect = 7e-018
Identities = 40/78 (51%), Positives = 47/78 (60%)
Frame = +3 / +2
Query: 171 GRTVCVTGAGGFIASWLVKRLLEKGYTVRGTVRNPVDPKNDHLRALDGXXXXXXXXXXXX 350
G TVCVTGAGGFIASWLVK LL +GYTV GTVR+ D K +HL+ L+
Sbjct: 359 GTTVCVTGAGGFIASWLVKLLLSRGYTVHGTVRDLSDEKTNHLKRLENAAGNLRIFKADL 538
Query: 351 XXPQSLAEAFSGCDGVFH 404
++A A GC GV H
Sbjct: 539 LDYDAMAAAVVGCQGVLH 592
Score = 56.5 bits (117), Expect = 1e-006
Identities = 26/42 (61%), Positives = 26/42 (61%)
Frame = -2 / -2
Query: 295 WSFFGSTGFLTVPRTV*PFSRRRLTSQEAMNPPAPVTQTVRP 170
W F S TVP TV*P R TS EAMNPPAPVT TV P
Sbjct: 483 WFVFSSLRSRTVPCTV*PRESRSFTSHEAMNPPAPVTHTVVP 358
Score = 46.9 bits (96), Expect = 8e-004
Identities = 22/59 (37%), Positives = 33/59 (55%)
Frame = -1 / -1
Query: 356 VQQVGAEEDETVDGAVKGPQVVVLWIHRVPDRAADCVALLQEALDEPGGNEPSSSGHAN 180
VQQ+ E E ++ Q+V L + V D A VA ++ L EP G+EP+ +GHA+
Sbjct: 544 VQQISLENPEVSGSILQALQMVRLLVTEVADGAVHGVAAGEQELHEPRGDEPAGAGHAH 368
>gb|AF010283.1| Sorghum bicolor ADP-glucose pyrophosphorylase subunit SH2,
transcriptional regulator, NADPH-dependent reductase A1-a
and NADPH-dependent reductase A1-b genes, complete cds
Length = 42446
Score = 57.4 bits (119), Expect(4) = 1e-017
Identities = 22/32 (68%), Positives = 26/32 (81%)
Frame = +3 / +2
Query: 180 VCVTGAGGFIASWLVKRLLEKGYTVRGTVRNP 275
V VTGA GF+ SWLV +LL+ GYTVR TVR+P
Sbjct: 39551 VVVTGASGFVGSWLVMKLLQAGYTVRATVRDP 39646
Score = 57.0 bits (118), Expect(4) = 6e-016
Identities = 22/32 (68%), Positives = 26/32 (81%)
Frame = +3 / +2
Query: 180 VCVTGAGGFIASWLVKRLLEKGYTVRGTVRNP 275
V VTGA GF+ SWLV +LL+ GYTVR TVR+P
Sbjct: 28409 VVVTGASGFLGSWLVMKLLQAGYTVRATVRDP 28504
Score = 54.2 bits (112), Expect(4) = 1e-017
Identities = 19/52 (36%), Positives = 32/52 (61%)
Frame = +3 / +3
Query: 816 YVHVRDVAEAHVRVYEAPHAHGRYICAESTLHRGDLCRVLAKLFPEYPVPTK 971
+VH+ D+ +AH+ ++E P A GRY+C+ DL +L +PEY +P +
Sbjct: 40593 FVHLDDLCDAHIFLFEHPAAAGRYVCSSCDTTIHDLAAMLRDRYPEYDIPER 40748
Score = 50.1 bits (103), Expect(4) = 6e-016
Identities = 18/52 (34%), Positives = 31/52 (59%)
Frame = +3 / +1
Query: 816 YVHVRDVAEAHVRVYEAPHAHGRYICAESTLHRGDLCRVLAKLFPEYPVPTK 971
+VH+ D+ +AH+ ++E P A GRY+C+ L +L +PEY +P +
Sbjct: 29437 FVHLDDLCDAHLFLFEHPAAAGRYVCSSHDATIHGLAAMLRDRYPEYDIPER 29592
Score = 42.3 bits (86), Expect(2) = 0.004
Identities = 21/34 (61%), Positives = 22/34 (64%)
Frame = -2 / -3
Query: 280 STGFLTVPRTV*PFSRRRLTSQEAMNPPAPVTQT 179
S G TV RTV*P R +TSQE NP APVT T
Sbjct: 28509 SPGSRTVARTV*PAWRSFMTSQEPRNPDAPVTTT 28408
Score = 39.6 bits (80), Expect = 0.13
Identities = 20/34 (58%), Positives = 21/34 (61%)
Frame = -2 / -3
Query: 280 STGFLTVPRTV*PFSRRRLTSQEAMNPPAPVTQT 179
S G TV RTV*P R +TSQE P APVT T
Sbjct: 39651 SPGSRTVARTV*PAWRSFMTSQEPTKPDAPVTTT 39550
Score = 29.5 bits (58), Expect(4) = 1e-017
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +3 / +1
Query: 477 AAADDAGVKRVVFTSSIGTVYMNPYRDP 560
A + V+R+VFTSS GT + +R P
Sbjct: 40099 ACKEAGTVRRIVFTSSAGTCNIEEWRKP 40182
Score = 29.5 bits (58), Expect(4) = 1e-017
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +3 / +1
Query: 363 SLAEAFSGCDGVFHAASPV 419
S +A GC GVFH A+P+
Sbjct: 39883 SFDDAIRGCTGVFHVATPM 39939
Score = 29.5 bits (58), Expect(4) = 6e-016
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +3 / +2
Query: 363 SLAEAFSGCDGVFHAASPV 419
S +A GC GVFH A+P+
Sbjct: 28742 SFDDAIRGCTGVFHVATPM 28798
Score = 29.0 bits (57), Expect(2) = 0.004
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = -2 / -1
Query: 415 GEAAWKTPSQPEKASARL 362
G A WKTP QP AS++L
Sbjct: 39935 GVATWKTPVQPLMASSKL 39882
Score = 27.6 bits (54), Expect(4) = 6e-016
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +3 / +2
Query: 477 AAADDAGVKRVVFTSSIGTVYMNPYRDP 560
A + V+R+VFTSS GTV + + P
Sbjct: 28967 ACKEAGTVRRIVFTSSAGTVNIEERQRP 29050
>gb|BI141055.1|BI141055 IP1_42_E11.b1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 496
Score = 65.7 bits (137), Expect(3) = 1e-017
Identities = 26/32 (81%), Positives = 28/32 (87%)
Frame = +3 / +1
Query: 180 VCVTGAGGFIASWLVKRLLEKGYTVRGTVRNP 275
VCVTGA GFIASWL+KRLLE GY V GTVR+P
Sbjct: 52 VCVTGASGFIASWLIKRLLESGYHVVGTVRDP 147
Score = 42.8 bits (87), Expect(3) = 3e-008
Identities = 21/38 (55%), Positives = 24/38 (63%)
Frame = -2 / -3
Query: 289 FFGSTGFLTVPRTV*PFSRRRLTSQEAMNPPAPVTQTV 176
F+ G LTVP T P S RL SQEA+ P APVT T+
Sbjct: 161 FWRFPGSLTVPTT*YPDSSSRLISQEAIKPEAPVTHTL 48
Score = 33.1 bits (66), Expect(3) = 1e-017
Identities = 17/45 (37%), Positives = 17/45 (37%)
Frame = +3 / +1
Query: 285 KNDHLRALDGXXXXXXXXXXXXXXPQSLAEAFSGCDGVFHAASPV 419
K HL L G S A CDGVFH ASPV
Sbjct: 160 KTAHLWKLPGAKERLQIVRADLLEEGSFDNAVMDCDGVFHTASPV 294
Score = 30.4 bits (60), Expect(3) = 1e-017
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +3 / +1
Query: 498 VKRVVFTSSIGTVYMNPYRDPSKPVDDTCWSDL 596
+KRVV TSS V + P+ +D+T WS +
Sbjct: 391 LKRVVLTSSSSAVRIRDDDQPNISLDETTWSSV 489
Score = 29.9 bits (59), Expect(3) = 3e-008
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = -2 / -3
Query: 418 TGEAAWKTPSQPEKASARL 362
TG+A WKTPSQ A ++L
Sbjct: 293 TGDAVWKTPSQSMTALSKL 237
Score = 24.0 bits (46), Expect(3) = 3e-008
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = -2 / -3
Query: 589 LQQVSSTGLLGSR*GFMYTVPMEDVNTTRF 500
L VSS+ +LG + T EDV TT F
Sbjct: 482 LHVVSSSEILG*SSSLILTADDEDVRTTLF 393
>gb|BG557816.1|BG557816 EM1_53_F09.b1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 470
Score = 54.2 bits (112), Expect(3) = 3e-017
Identities = 24/39 (61%), Positives = 27/39 (69%)
Frame = +3 / +2
Query: 165 GQGRTVCVTGAGGFIASWLVKRLLEKGYTVRGTVRNPVD 281
G+G TV VTGA GFI S LV+ LL +GY VR V NP D
Sbjct: 62 GKGETVLVTGASGFIGSTLVRGLLGRGYNVRAGVLNPDD 178
Score = 43.2 bits (88), Expect(3) = 5e-006
Identities = 21/39 (53%), Positives = 23/39 (58%)
Frame = -2 / -3
Query: 280 STGFLTVPRTV*PFSRRRLTSQEAMNPPAPVTQTVRPCP 164
S+G T RT+*P RR T E M P APVT TV P P
Sbjct: 177 SSGLRTPARTL*PRPRRPRTRVEPMKPLAPVTSTVSPLP 61
Score = 37.3 bits (75), Expect(3) = 3e-017
Identities = 17/37 (45%), Positives = 22/37 (59%)
Frame = +3 / +2
Query: 414 PVTDDPEMMIEPAIRGTRYVMAAADDAGVKRVVFTSS 524
PV D ++ PA+ GTR V+ AA DAG R V +S
Sbjct: 335 PVKDPQNQLMVPAVEGTRNVVRAAKDAGGVRRVVVTS 445
Score = 36.3 bits (73), Expect(3) = 3e-017
Identities = 13/23 (56%), Positives = 16/23 (69%)
Frame = +3 / +2
Query: 363 SLAEAFSGCDGVFHAASPVTDDP 431
+L +A GC G+FH ASP T DP
Sbjct: 269 ALLDAARGCSGIFHLASPCTVDP 337
Score = 23.5 bits (45), Expect(3) = 5e-006
Identities = 15/37 (40%), Positives = 16/37 (43%)
Frame = -2 / -3
Query: 523 EDVNTTRFTPASSAAAIT*RVPRXXXXXXXXXXSVTG 413
E T R PAS AA T RVP S+TG
Sbjct: 444 EVTTTRRTPPASLAARTTFRVPSTAGTIS*FWGSLTG 334
Score = 22.1 bits (42), Expect(3) = 5e-006
Identities = 12/34 (35%), Positives = 15/34 (44%)
Frame = -1 / -2
Query: 404 VEDAVTAGEGLGKALWVQQVGAEEDETVDGAVKG 303
VED G+ + VQ+V AEE E G
Sbjct: 310 VEDTRAPARGVEQRGAVQEVAAEEAEAAVAGAGG 209
>gb|CN132257.1|CN132257 OX1_5_C03.b1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_5_C03_A002 3', mRNA sequence
Length = 673
Score = 56.5 bits (117), Expect(2) = 4e-017
Identities = 20/49 (40%), Positives = 28/49 (57%)
Frame = +3 / +2
Query: 537 YMNPYRDPSKPVDDTCWSDLEYCKNTQNWYCYAKTVAEQGAWEVARKRG 683
+ NP + D++CWSD +C +NWY AKT+AE+ A E K G
Sbjct: 2 HYNPSWPHGRIKDESCWSDKNFCMKNENWYTAAKTIAEETALEYGEKNG 148
Score = 53.8 bits (111), Expect(2) = 4e-017
Identities = 24/71 (33%), Positives = 38/71 (53%)
Frame = +3 / +2
Query: 744 NASTDHVMKYLTGSATTYVNAAQAYVHVRDVAEAHVRVYEAPHAHGRYICAESTLHRGDL 923
N +++ ++ + G N V VRDVA+A + VYE + GRYICA + D+
Sbjct: 209 NTTSELLIYIIKGGPRLMKNLPWNIVDVRDVADALLLVYEKVGSSGRYICAPDRISTNDI 388
Query: 924 CRVLAKLFPEY 956
++L K +P Y
Sbjct: 389 VKLLKKSYPNY 421
Score = 28.1 bits (55), Expect(2) = 1.4
Identities = 16/30 (53%), Positives = 19/30 (63%)
Frame = -2 / -2
Query: 661 HAPCSATVLA*QYQFWVFLQYSRSLQQVSS 572
+A SA VLA YQF F+Q S QQ+SS
Sbjct: 126 NAVSSAIVLAAVYQFSFFMQKFLSDQQLSS 37
Score = 25.4 bits (49), Expect(2) = 1.4
Identities = 19/55 (34%), Positives = 25/55 (45%)
Frame = -2 / -2
Query: 895 AQM*RPCAWGASYTRTCASATSLTCTYACAAFT*VVADPVRYFITWSVLAFTVGC 731
AQM P SYT++ ASATS T T F + P + S++ GC
Sbjct: 360 AQMYLPDDPTFSYTKSKASATSRTSTMFQGRFFISLGPPFIM*MRSSLVVLIRGC 196
>gb|CN128033.1|CN128033 RHOH1_26_C10.g1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_26_C10_A002 5', mRNA sequence
Length = 297
Score = 50.1 bits (103), Expect(3) = 4e-017
Identities = 19/24 (79%), Positives = 22/24 (91%)
Frame = +3 / +3
Query: 174 RTVCVTGAGGFIASWLVKRLLEKG 245
++VCVTGAGGFIASWLVK LL +G
Sbjct: 12 KSVCVTGAGGFIASWLVKLLLSRG 83
Score = 40.5 bits (82), Expect(3) = 4e-017
Identities = 16/23 (69%), Positives = 19/23 (82%)
Frame = +3 / +3
Query: 246 YTVRGTVRNPVDPKNDHLRALDG 314
YTVRGTVR+P KN HL+AL+G
Sbjct: 87 YTVRGTVRDPGASKNAHLKALEG 155
Score = 36.8 bits (74), Expect(3) = 4e-017
Identities = 13/19 (68%), Positives = 16/19 (84%)
Frame = +3 / +3
Query: 363 SLAEAFSGCDGVFHAASPV 419
S+A A +GC+GVFH ASPV
Sbjct: 204 SVASAIAGCEGVFHVASPV 260
Score = 36.3 bits (73), Expect(2) = 9e-005
Identities = 14/23 (60%), Positives = 16/23 (69%)
Frame = -2 / -3
Query: 244 PFSRRRLTSQEAMNPPAPVTQTV 176
P RR TS +AM PPAPVT T+
Sbjct: 82 PRERRSFTSHDAMKPPAPVTHTL 14
Score = 31.8 bits (63), Expect(2) = 9e-005
Identities = 13/19 (68%), Positives = 13/19 (68%)
Frame = -2 / -3
Query: 418 TGEAAWKTPSQPEKASARL 362
TG A WKTPSQP A A L
Sbjct: 259 TGLATWKTPSQPAIADATL 203
>gb|CD430959.1|CD430959 ETH1_6_A10.b1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_6_A10_A002 3', mRNA sequence
Length = 555
Score = 79.4 bits (167), Expect(2) = 7e-017
Identities = 28/52 (53%), Positives = 38/52 (73%)
Frame = +3 / +1
Query: 900 STLHRGDLCRVLAKLFPEYPVPTKCKDQVNPPVVGYKFTNQRLKDLGMDFVP 1055
+ LHR D+ R L K FP+YPVP +C D+VNP YK +NQ+L+DLG++F P
Sbjct: 13 AVLHREDVVRTLRKFFPDYPVPERCSDEVNPRKQPYKISNQKLRDLGLEFTP 168
Score = 46.4 bits (95), Expect(2) = 3e-007
Identities = 25/52 (48%), Positives = 27/52 (51%)
Frame = -2 / -2
Query: 1066 ALQTGTKSIPRSLSLWLVNLYPTTGGLTWSLHLVGTGYSGKSLARTRQRSPR 911
A G S P+SLS WL LY G T S HL GTG SGK+L S R
Sbjct: 179 ACAAGVNSKPKSLSFWLDILYGCFLGFTSSEHLSGTG*SGKNLRSVLTTSSR 24
Score = 37.3 bits (75), Expect = 0.61
Identities = 22/55 (40%), Positives = 31/55 (56%)
Frame = -1 / -1
Query: 1070 RGTADRHEVHPQILEPLVGELVSYHRRVNLVLALGGYGVLREELGEDAAEVAAVQ 906
+G R E+ Q+ + LVG LV V+L+ A GV+REEL E +V AV+
Sbjct: 183 QGLRRRRELQAQVPQLLVGYLVRLLPWVHLIRAPFRDGVVREELAERPDDVLAVE 19
Score = 29.9 bits (59), Expect(2) = 3e-007
Identities = 11/17 (64%), Positives = 13/17 (76%)
Frame = -3 / -2
Query: 1110 GSMPFSWRLVTVS*RHC 1060
G MPFSW+ +TVS R C
Sbjct: 224 GMMPFSWKHMTVSYRAC 174
Score = 29.9 bits (59), Expect(2) = 7e-017
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = +2 / +1
Query: 1061 QCLYETVTSLQEKGMLPV 1114
Q LY+TV QEKG++P+
Sbjct: 175 QALYDTVICFQEKGIIPI 228
>gb|BE360812.1|BE360812 DG1_67_G03.b2_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 498
Score = 90.0 bits (190), Expect = 8e-017
Identities = 35/42 (83%), Positives = 38/42 (90%)
Frame = +3 / +3
Query: 165 GQGRTVCVTGAGGFIASWLVKRLLEKGYTVRGTVRNPVDPKN 290
G G+TVCVTGA G+IASWLVK LLEKGYTV+GTVRNP DPKN
Sbjct: 372 GNGQTVCVTGAAGYIASWLVKMLLEKGYTVKGTVRNPDDPKN 497
Score = 66.6 bits (139), Expect = 9e-010
Identities = 30/42 (71%), Positives = 31/42 (73%)
Frame = -2 / -3
Query: 289 FFGSTGFLTVPRTV*PFSRRRLTSQEAMNPPAPVTQTVRPCP 164
FFGS+GFLTVP TV PFS LTS EAM P APVT TV P P
Sbjct: 496 FFGSSGFLTVPLTVYPFSSSILTSHEAMYPAAPVTHTVCPFP 371
Score = 40.5 bits (82), Expect = 0.066
Identities = 18/37 (48%), Positives = 25/37 (67%)
Frame = -1 / -2
Query: 290 VLWIHRVPDRAADCVALLQEALDEPGGNEPSSSGHAN 180
VL + VPD A D V+LL++ LDEP G+ P +G A+
Sbjct: 497 VLRVIWVPDGALDSVSLLEQHLDEPRGDVPGRAGDAH 387
Score = 33.6 bits (67), Expect = 7.8
Identities = 14/25 (56%), Positives = 16/25 (64%)
Frame = +2 / +2
Query: 200 RVHCLLARQAPPGEGLHSPRHGQEP 274
RVH L+ARQ EG+H H QEP
Sbjct: 407 RVHRLVARQDAAREGIHCQGHRQEP 481
>gb|CW031414.1|CW031414 104_260_10500796_114_30365 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10500796, DNA
sequence
Length = 801
Score = 45.1 bits (92), Expect(4) = 2e-016
Identities = 20/42 (47%), Positives = 22/42 (52%)
Frame = +3 / +2
Query: 294 HLRALDGXXXXXXXXXXXXXXPQSLAEAFSGCDGVFHAASPV 419
HL ALDG S+A A +GCDGVFH ASPV
Sbjct: 2 HLMALDGAGERLRLFKADLLDRASVAAAVAGCDGVFHVASPV 127
Score = 42.3 bits (86), Expect(2) = 3e-004
Identities = 21/42 (50%), Positives = 25/42 (59%)
Frame = -1 / -3
Query: 419 DRGGGVEDAVTAGEGLGKALWVQQVGAEEDETVDGAVKGPQV 294
D G VEDAV A G G A VQQV E+ + + GAV+ QV
Sbjct: 127 DGAGDVEDAVAASNGGGDAGTVQQVSLEQPQALPGAVQRHQV 2
Score = 40.9 bits (83), Expect(4) = 2e-016
Identities = 18/47 (38%), Positives = 27/47 (57%)
Frame = +3 / +2
Query: 438 MIEPAIRGTRYVMAAADDAGVKRVVFTSSIGTVYMNPYRDPSKPVDD 578
++ PA+ GT+ ++ A+ A V+RVV SS+ V NP P V D
Sbjct: 263 IMAPAVTGTQNMLEASHAANVRRVVVVSSVAAVIANPTSIPDDAVAD 403
Score = 33.6 bits (67), Expect(4) = 2e-016
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = +3 / +3
Query: 615 QNWYCYAKTVAEQGAWEVARKRG 683
QNWYC +KTVAE+ A + G
Sbjct: 549 QNWYCLSKTVAEREALAYGERTG 617
Score = 29.5 bits (58), Expect(4) = 2e-016
Identities = 8/15 (53%), Positives = 12/15 (80%)
Frame = +3 / +2
Query: 573 DDTCWSDLEYCKNTQ 617
D+ CWSD +YC+ T+
Sbjct: 401 DEDCWSDEDYCRATK 445
Score = 27.2 bits (53), Expect(2) = 3e-004
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = -2 / -3
Query: 781 PVRYFITWSVLAFTVGC 731
P RYF ++AFTVGC
Sbjct: 715 PFRYFTKPMLVAFTVGC 665
>gb|CX614668.1|CX614668 GABR1_15_C04.g1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_15_C04_A002 5', mRNA sequence
Length = 492
Score = 58.3 bits (121), Expect(2) = 2e-016
Identities = 27/58 (46%), Positives = 31/58 (53%)
Frame = +3 / +1
Query: 246 YTVRGTVRNPVDPKNDHLRALDGXXXXXXXXXXXXXXPQSLAEAFSGCDGVFHAASPV 419
Y V GTVR+P D N HL A+DG S+A A +G DGVFH ASPV
Sbjct: 220 YVVHGTVRDPGDA*NAHLAAMDGAAARLRLFRADLLDYGSVAAAVAGSDGVFHVASPV 393
Score = 55.6 bits (115), Expect(2) = 3e-012
Identities = 30/59 (50%), Positives = 35/59 (59%)
Frame = -1 / -1
Query: 422 GDRGGGVEDAVTAGEGLGKALWVQQVGAEEDETVDGAVKGPQVVVLWIHRVPDRAADCV 246
GD G VEDAV AG+G A VQQVG E+ + GAV QV VL + R+ D A D V
Sbjct: 396 GDWGRDVEDAVAAGDGRRHAAVVQQVGPEQAQPGRGAVHRRQVRVLGVARITDGAMDHV 220
Score = 49.2 bits (101), Expect(2) = 2e-016
Identities = 19/25 (76%), Positives = 21/25 (84%)
Frame = +3 / +1
Query: 171 GRTVCVTGAGGFIASWLVKRLLEKG 245
G VCVTGAGGF+ASWLV+RLL G
Sbjct: 142 GTAVCVTGAGGFLASWLVERLLAGG 216
Score = 38.2 bits (77), Expect(2) = 3e-012
Identities = 16/25 (64%), Positives = 17/25 (68%)
Frame = -2 / -2
Query: 244 PFSRRRLTSQEAMNPPAPVTQTVRP 170
P +RRR TS EA PPAPVT T P
Sbjct: 215 PPARRRSTSHEAKKPPAPVTHTAVP 141
Score = 32.2 bits (64), Expect(2) = 0.006
Identities = 12/19 (63%), Positives = 15/19 (78%)
Frame = -1 / -1
Query: 236 QEALDEPGGNEPSSSGHAN 180
+EALDEP G E S +GHA+
Sbjct: 207 EEALDEPRGQEASRAGHAH 151
Score = 32.2 bits (64), Expect(2) = 0.006
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = -2 / -2
Query: 418 TGEAAWKTPSQPEKASARL 362
TG+A WKTPS P A+A L
Sbjct: 392 TGDATWKTPSLPATAAATL 336
>gb|BZ342273.1|BZ342273 ic81e11.b1 WGS-SbicolorF (JM107 adapted methyl filtered) Sorghum
bicolor genomic clone ic81e11 5', DNA sequence
Length = 605
Score = 49.2 bits (101), Expect(3) = 3e-016
Identities = 19/37 (51%), Positives = 24/37 (64%)
Frame = +3 / -1
Query: 861 EAPHAHGRYICAESTLHRGDLCRVLAKLFPEYPVPTK 971
E P A GRY+C + LHR L +L +LFP+YPV K
Sbjct: 605 ERPSACGRYLCIGTVLHREQLVAMLKELFPQYPVTAK 495
Score = 42.8 bits (87), Expect(3) = 3e-016
Identities = 14/30 (46%), Positives = 22/30 (73%)
Frame = +3 / -1
Query: 969 KCKDQVNPPVVGYKFTNQRLKDLGMDFVPV 1058
+C+D P +KF+NQRL+DLG++F P+
Sbjct: 386 RCEDDGKPMAKPFKFSNQRLRDLGLEFTPL 297
Score = 36.3 bits (73), Expect(2) = 1e-005
Identities = 19/37 (51%), Positives = 22/37 (59%)
Frame = -1 / +3
Query: 971 LGGYGVLREELGEDAAEVAAVQGALGADVAAVRVGRL 861
LG GVLREE E E+ AVQ A+VA+ R G L
Sbjct: 495 LGCDGVLREEFLEHGDELFAVQHGADAEVASARAGAL 605
Score = 34.5 bits (69), Expect(2) = 1e-005
Identities = 17/30 (56%), Positives = 18/30 (60%)
Frame = -2 / +1
Query: 1057 TGTKSIPRSLSLWLVNLYPTTGGLTWSLHL 968
+G S PRSLSLWL NL GL S HL
Sbjct: 298 SGVNSKPRSLSLWLENLNGFAIGLPSSSHL 387
Score = 34.1 bits (68), Expect = 5.7
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = +1 / -2
Query: 1006 TSSPTRGSRIWGWTSCRS 1059
+SSPTRGS W W+S RS
Sbjct: 349 SSSPTRGSGTWAWSSLRS 296
Score = 32.7 bits (65), Expect(3) = 3e-016
Identities = 13/21 (61%), Positives = 16/21 (76%)
Frame = +2 / -1
Query: 1067 LYETVTSLQEKGMLPVLPTKQ 1129
LYETV LQ+KG LPV+ +Q
Sbjct: 287 LYETVVCLQQKGHLPVIQQQQ 225
Score = 32.2 bits (64), Expect(2) = 0.005
Identities = 14/29 (48%), Positives = 19/29 (65%)
Frame = -1 / +3
Query: 1058 DRHEVHPQILEPLVGELVSYHRRVNLVLA 972
+R E+ Q+ EPLVGEL R+ +VLA
Sbjct: 297 ERSELQAQVPEPLVGELERLRHRLAVVLA 383
Score = 29.9 bits (59), Expect(2) = 0.005
Identities = 15/36 (41%), Positives = 17/36 (47%)
Frame = -2 / +1
Query: 973 HLVGTGYSGKSLARTRQRSPRCRVLSAQM*RPCAWG 866
+L TGY GKS RC + Q *RP A G
Sbjct: 493 YLAVTGYCGKSSLSMATSCSRCSTVPMQR*RPHALG 600
>gb|CW408710.1|CW408710 fsbb001f102l13f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f102l13, DNA
sequence
Length = 577
Score = 49.2 bits (101), Expect(3) = 3e-016
Identities = 19/37 (51%), Positives = 24/37 (64%)
Frame = +3 / -3
Query: 861 EAPHAHGRYICAESTLHRGDLCRVLAKLFPEYPVPTK 971
E P A GRY+C + LHR L +L +LFP+YPV K
Sbjct: 575 ERPSACGRYLCIGTVLHREQLVAMLKELFPQYPVTAK 465
Score = 42.8 bits (87), Expect(3) = 3e-016
Identities = 14/30 (46%), Positives = 22/30 (73%)
Frame = +3 / -3
Query: 969 KCKDQVNPPVVGYKFTNQRLKDLGMDFVPV 1058
+C+D P +KF+NQRL+DLG++F P+
Sbjct: 356 RCEDDGKPMAKPFKFSNQRLRDLGLEFTPL 267
Score = 36.3 bits (73), Expect(2) = 1e-005
Identities = 19/37 (51%), Positives = 22/37 (59%)
Frame = -1 / +3
Query: 971 LGGYGVLREELGEDAAEVAAVQGALGADVAAVRVGRL 861
LG GVLREE E E+ AVQ A+VA+ R G L
Sbjct: 465 LGCDGVLREEFLEHGDELFAVQHGADAEVASARAGAL 575
Score = 34.5 bits (69), Expect(2) = 1e-005
Identities = 17/30 (56%), Positives = 18/30 (60%)
Frame = -2 / +1
Query: 1057 TGTKSIPRSLSLWLVNLYPTTGGLTWSLHL 968
+G S PRSLSLWL NL GL S HL
Sbjct: 268 SGVNSKPRSLSLWLENLNGFAIGLPSSSHL 357
Score = 34.1 bits (68), Expect = 5.7
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = +1 / -1
Query: 1006 TSSPTRGSRIWGWTSCRS 1059
+SSPTRGS W W+S RS
Sbjct: 319 SSSPTRGSGTWAWSSLRS 266
Score = 32.7 bits (65), Expect(3) = 3e-016
Identities = 13/21 (61%), Positives = 16/21 (76%)
Frame = +2 / -3
Query: 1067 LYETVTSLQEKGMLPVLPTKQ 1129
LYETV LQ+KG LPV+ +Q
Sbjct: 257 LYETVVCLQQKGHLPVIQQQQ 195
Score = 32.2 bits (64), Expect(2) = 0.002
Identities = 14/29 (48%), Positives = 19/29 (65%)
Frame = -1 / +3
Query: 1058 DRHEVHPQILEPLVGELVSYHRRVNLVLA 972
+R E+ Q+ EPLVGEL R+ +VLA
Sbjct: 267 ERSELQAQVPEPLVGELERLRHRLAVVLA 353
Score = 31.3 bits (62), Expect(2) = 0.002
Identities = 16/38 (42%), Positives = 18/38 (47%)
Frame = -2 / +1
Query: 973 HLVGTGYSGKSLARTRQRSPRCRVLSAQM*RPCAWGAS 860
+L TGY GKS RC + Q *RP A G S
Sbjct: 463 YLAVTGYCGKSSLSMATSCSRCSTVPMQR*RPHALGRS 576
>gb|CF756307.1|CF756307 DSAF1_4_G03.g1_A011 Drought-stressed after flowering Sorghum
bicolor cDNA clone DSAF1_4_G03_A011 3', mRNA sequence
Length = 664
Score = 75.8 bits (159), Expect(2) = 3e-016
Identities = 35/81 (43%), Positives = 45/81 (55%)
Frame = +3 / +3
Query: 744 NASTDHVMKYLTGSATTYVNAAQAYVHVRDVAEAHVRVYEAPHAHGRYICAESTLHRGDL 923
N+S +++ L G Y + VHV DVA AH+ V+E P A GR+ICAES H D
Sbjct: 129 NSSMSVLLRLLQGCTEEYKDIWMGAVHVEDVALAHLLVFENPSASGRHICAESINHLSDF 308
Query: 924 CRVLAKLFPEYPVPTKCKDQV 986
LA+L+P Y VP QV
Sbjct: 309 AAKLAELYPSYKVPNVALWQV 371
Score = 31.3 bits (62), Expect(2) = 3e-016
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = +3 / +3
Query: 621 WYCYAKTVAEQGAWEVARKRG 683
WY +KT+AE+ AW+ A + G
Sbjct: 6 WYPVSKTLAEKAAWKFAEENG 68
>gb|BG946962.1|BG946962 IP1_1_H02.b1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 485
Score = 66.6 bits (139), Expect(3) = 3e-016
Identities = 27/36 (75%), Positives = 30/36 (83%)
Frame = +3 / +3
Query: 180 VCVTGAGGFIASWLVKRLLEKGYTVRGTVRNPVDPK 287
VCVTGA GFIASWL+KRLLE GY V GTVR+P + K
Sbjct: 36 VCVTGASGFIASWLIKRLLESGYHVLGTVRDPGNHK 143
Score = 51.9 bits (107), Expect(3) = 2e-010
Identities = 24/33 (72%), Positives = 25/33 (75%)
Frame = -2 / -2
Query: 274 GFLTVPRTV*PFSRRRLTSQEAMNPPAPVTQTV 176
G LTVPRT P SR RL SQEAM P APVTQT+
Sbjct: 130 GSLTVPRTWYPDSRSRLMSQEAMKPDAPVTQTL 32
Score = 33.6 bits (67), Expect(3) = 3e-016
Identities = 16/45 (35%), Positives = 19/45 (42%)
Frame = +3 / +3
Query: 285 KNDHLRALDGXXXXXXXXXXXXXXPQSLAEAFSGCDGVFHAASPV 419
K HL L+G S +A C+GVFH ASPV
Sbjct: 144 KVGHLWVLEGAKERLQLVRADLLEEGSFDDAVMACEGVFHTASPV 278
Score = 32.7 bits (65), Expect(3) = 2e-010
Identities = 12/20 (60%), Positives = 16/20 (80%)
Frame = -2 / -2
Query: 421 VTGEAAWKTPSQPEKASARL 362
+TG+A WKTPSQ AS++L
Sbjct: 280 MTGDAVWKTPSQAITASSKL 221
Score = 30.4 bits (60), Expect(2) = 0.029
Identities = 15/47 (31%), Positives = 28/47 (59%)
Frame = -1 / -1
Query: 434 LRVIGDRGGGVEDAVTAGEGLGKALWVQQVGAEEDETVDGAVKGPQV 294
+R DR VEDA+T+ + KA ++Q+V + + + + A + P+V
Sbjct: 293 IRFSDDRRCSVEDALTSHHSVVKAPFLQEVSSHKLQPLLCAFQNPEV 153
Score = 29.0 bits (57), Expect(2) = 0.029
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = -1 / -1
Query: 272 VPDRAADCVALLQEALDEPGGNE 204
V D + D V L++ LDEPGG+E
Sbjct: 128 VSDCSEDMVPRLKKPLDEPGGDE 60
Score = 28.1 bits (55), Expect(3) = 3e-016
Identities = 8/17 (47%), Positives = 13/17 (76%)
Frame = +3 / +3
Query: 558 PSKPVDDTCWSDLEYCK 608
P+ +D+T WS +EYC+
Sbjct: 435 PNVLLDETSWSSIEYCE 485
Score = 24.0 bits (46), Expect(3) = 2e-010
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = -2 / -2
Query: 604 QYSRSLQQVSSTGLLGSR 551
QYS L VSS+ LG R
Sbjct: 481 QYSMELHDVSSSNTLGGR 428
>gb|CW192938.1|CW192938 104_615_11179297_116_36769_005 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11179297, DNA
sequence
Length = 712
Score = 70.3 bits (147), Expect(2) = 4e-016
Identities = 28/34 (82%), Positives = 30/34 (88%)
Frame = +3 / -1
Query: 171 GRTVCVTGAGGFIASWLVKRLLEKGYTVRGTVRN 272
G TVCVTGAGGFIASWLVK LL +GYTV GTVR+
Sbjct: 418 GTTVCVTGAGGFIASWLVKLLLSRGYTVHGTVRD 317
Score = 51.5 bits (106), Expect(2) = 2e-006
Identities = 23/32 (71%), Positives = 23/32 (71%)
Frame = -2 / +3
Query: 265 TVPRTV*PFSRRRLTSQEAMNPPAPVTQTVRP 170
TVP TV*P R TS EAMNPPAPVT TV P
Sbjct: 324 TVPCTV*PRESRSFTSHEAMNPPAPVTHTVVP 419
Score = 36.3 bits (73), Expect(2) = 4e-016
Identities = 15/50 (30%), Positives = 22/50 (44%)
Frame = +3 / -3
Query: 279 DPKNDHLRALDGXXXXXXXXXXXXXXPQSLAEAFSGCDGVFHAASPVTDD 428
D K +HL+ L+ ++A A GC GV H A+PV +
Sbjct: 230 DEKTNHLKRLENAAGNLRIFKADLLDYDAMAAAVVGCQGVLHVATPVPSE 81
Score = 25.4 bits (49), Expect(2) = 2e-006
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = -2 / +1
Query: 418 TGEAAWKTPSQPEKASA 368
TG A W+TP P A+A
Sbjct: 91 TGVATWRTPWHPTTAAA 141
>gb|CW403430.1|CW403430 fsbb001f095c10k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f095c10, DNA
sequence
Length = 661
Score = 70.3 bits (147), Expect(2) = 4e-016
Identities = 28/34 (82%), Positives = 30/34 (88%)
Frame = +3 / +2
Query: 171 GRTVCVTGAGGFIASWLVKRLLEKGYTVRGTVRN 272
G TVCVTGAGGFIASWLVK LL +GYTV GTVR+
Sbjct: 215 GTTVCVTGAGGFIASWLVKLLLSRGYTVHGTVRD 316
Score = 51.5 bits (106), Expect(2) = 2e-006
Identities = 23/32 (71%), Positives = 23/32 (71%)
Frame = -2 / -2
Query: 265 TVPRTV*PFSRRRLTSQEAMNPPAPVTQTVRP 170
TVP TV*P R TS EAMNPPAPVT TV P
Sbjct: 309 TVPCTV*PRESRSFTSHEAMNPPAPVTHTVVP 214
Score = 36.3 bits (73), Expect(2) = 4e-016
Identities = 15/50 (30%), Positives = 22/50 (44%)
Frame = +3 / +1
Query: 279 DPKNDHLRALDGXXXXXXXXXXXXXXPQSLAEAFSGCDGVFHAASPVTDD 428
D K +HL+ L+ ++A A GC GV H A+PV +
Sbjct: 403 DEKTNHLKRLENAAGNLRIFKADLLDYDAMAAAVVGCQGVLHVATPVPSE 552
Score = 25.4 bits (49), Expect(2) = 2e-006
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = -2 / -3
Query: 418 TGEAAWKTPSQPEKASA 368
TG A W+TP P A+A
Sbjct: 542 TGVATWRTPWHPTTAAA 492
>gb|CW203138.1|CW203138 104_629_11185470_116_36913_021 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11185470, DNA
sequence
Length = 621
Score = 57.0 bits (118), Expect(2) = 4e-016
Identities = 24/67 (35%), Positives = 38/67 (56%)
Frame = +3 / -1
Query: 408 ASPVTDDPEMMIEPAIRGTRYVMAAADDAGVKRVVFTSSIGTVYMNPYRDPSKPVDDTCW 587
AS D ++ PA+ GTR V+ A +A V+RVV SS+ + +NP +D+ W
Sbjct: 345 ASKPADPELEVVAPAVDGTRNVLRACHEANVRRVVVVSSVAAIAVNPNCRNGVVLDEEWW 166
Query: 588 SDLEYCK 608
SD ++C+
Sbjct: 165 SDEDFCR 145
Score = 49.6 bits (102), Expect(2) = 4e-016
Identities = 22/47 (46%), Positives = 24/47 (51%)
Frame = +3 / -1
Query: 279 DPKNDHLRALDGXXXXXXXXXXXXXXPQSLAEAFSGCDGVFHAASPV 419
DPK HL ALDG +A A +GCDGVFH ASPV
Sbjct: 489 DPKYAHLMALDGAVERLRLFKADMLDHAGVAAAVAGCDGVFHVASPV 349
Score = 40.5 bits (82), Expect(2) = 7e-004
Identities = 21/45 (46%), Positives = 26/45 (57%)
Frame = -1 / +1
Query: 419 DRGGGVEDAVTAGEGLGKALWVQQVGAEEDETVDGAVKGPQVVVL 285
D G VEDAV AG G A VQ V E+ + + GA++ QV VL
Sbjct: 349 DGAGNVEDAVAAGHGSRDAGVVQHVRLEQPQPLHGAIQRHQVRVL 483
Score = 24.4 bits (47), Expect(2) = 7e-004
Identities = 19/50 (38%), Positives = 22/50 (44%)
Frame = -2 / +2
Query: 607 LQYSRSLQQVSSTGLLGSR*GFMYTVPMEDVNTTRFTPASSAAAIT*RVP 458
LQ S S SS + GF ++ TTR T AS A T RVP
Sbjct: 146 LQKSSSDHHSSSRTTPLRQLGFTAMAATDETTTTRRTLASWQALSTLRVP 295
>gb|CW305139.1|CW305139 104_790_11466160_116_37435_058 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11466160, DNA
sequence
Length = 635
Score = 56.5 bits (117), Expect(2) = 5e-016
Identities = 25/53 (47%), Positives = 29/53 (54%)
Frame = +3 / +3
Query: 261 TVRNPVDPKNDHLRALDGXXXXXXXXXXXXXXPQSLAEAFSGCDGVFHAASPV 419
T+ + DPKN HL ALDG S+A A +GCDGVFH ASPV
Sbjct: 435 TICDAGDPKNAHLMALDGAAERLRLFKADLLDRASVAAAVAGCDGVFHVASPV 593
Score = 52.8 bits (109), Expect(2) = 5e-016
Identities = 19/24 (79%), Positives = 23/24 (95%)
Frame = +3 / +3
Query: 174 RTVCVTGAGGFIASWLVKRLLEKG 245
+TVCVTGAGGF+ASWLV+RLL +G
Sbjct: 201 KTVCVTGAGGFVASWLVQRLLSRG 272
Score = 40.9 bits (83), Expect(2) = 1e-007
Identities = 23/47 (48%), Positives = 27/47 (57%)
Frame = -1 / -1
Query: 419 DRGGGVEDAVTAGEGLGKALWVQQVGAEEDETVDGAVKGPQVVVLWI 279
D G VEDAV A G G A VQQ+G E + + AV+ QV VL I
Sbjct: 593 DGAGDVEDAVAASNGGGDAGTVQQIGLE*PQALRRAVQRHQVRVLGI 453
Score = 40.0 bits (81), Expect(2) = 1e-007
Identities = 16/23 (69%), Positives = 16/23 (69%)
Frame = -2 / -2
Query: 244 PFSRRRLTSQEAMNPPAPVTQTV 176
P RRR TS EA PPAPVT TV
Sbjct: 271 PLDRRRCTSHEATKPPAPVTHTV 203
Score = 34.5 bits (69), Expect(2) = 0.70
Identities = 17/47 (36%), Positives = 19/47 (40%)
Frame = -2 / -2
Query: 418 TGEAAWKTPSQPEKASARLCGXXXXXXXXXXXXXXXXXXXRWSFFGS 278
TG A WKTPSQP A+A L R +F GS
Sbjct: 592 TGLATWKTPSQPATAAATLARSSKSALNSRRRSAAPSSAIRCAFLGS 452
Score = 23.1 bits (44), Expect(2) = 0.70
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = -1 / -1
Query: 233 EALDEPGGNEPSSSGHAN 180
EAL EP G+E + HA+
Sbjct: 260 EALHEPRGDEAPGARHAH 207
>gb|CF758652.1|CF758652 DSAF1_35_A01.g1_A011 Drought-stressed after flowering Sorghum
bicolor cDNA clone DSAF1_35_A01_A011 3', mRNA sequence
Length = 463
Score = 68.9 bits (144), Expect(2) = 8e-016
Identities = 26/60 (43%), Positives = 37/60 (61%)
Frame = +3 / +2
Query: 438 MIEPAIRGTRYVMAAADDAGVKRVVFTSSIGTVYMNPYRDPSKPVDDTCWSDLEYCKNTQ 617
+I PA+ GT V+ A +A VKRVV SS+ ++ NPY K D+ CWSD +YC+ +
Sbjct: 155 VIGPAVLGTTNVLKACYEAKVKRVVVVSSVAAIFSNPYWPKGKAFDEDCWSDEDYCRKNE 334
Score = 36.8 bits (74), Expect(2) = 8e-016
Identities = 13/19 (68%), Positives = 16/19 (84%)
Frame = +3 / +2
Query: 363 SLAEAFSGCDGVFHAASPV 419
S+A A +GC+GVFH ASPV
Sbjct: 65 SVASAIAGCEGVFHVASPV 121
Score = 34.5 bits (69), Expect(2) = 3e-004
Identities = 24/51 (47%), Positives = 26/51 (50%)
Frame = -2 / -2
Query: 610 FLQYSRSLQQVSSTGLLGSR*GFMYTVPMEDVNTTRFTPASSAAAIT*RVP 458
FLQ S S QQ SS L +*G + ED TTR T AS A T VP
Sbjct: 327 FLQ*SSSDQQSSSKALPLGQ*GLLNIAATEDTTTTRLTFAS*QAFNTLVVP 175
Score = 31.8 bits (63), Expect(2) = 3e-004
Identities = 13/19 (68%), Positives = 13/19 (68%)
Frame = -2 / -2
Query: 418 TGEAAWKTPSQPEKASARL 362
TG A WKTPSQP A A L
Sbjct: 120 TGLATWKTPSQPAIADATL 64
>gb|CD228254.1|CD228254 CCC1_6_B12.g1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_6_B12_A007 5', mRNA sequence
Length = 612
Score = 56.5 bits (117), Expect(3) = 9e-016
Identities = 23/39 (58%), Positives = 26/39 (66%)
Frame = +3 / +2
Query: 165 GQGRTVCVTGAGGFIASWLVKRLLEKGYTVRGTVRNPVD 281
G VCVTG GFI SWLV+ LL +GYTV TV+N D
Sbjct: 266 GGSSLVCVTGGSGFIGSWLVRLLLGRGYTVHATVKNLQD 382
Score = 45.5 bits (93), Expect(2) = 9e-007
Identities = 22/31 (70%), Positives = 22/31 (70%)
Frame = -2 / -1
Query: 271 FLTVPRTV*PFSRRRLTSQEAMNPPAPVTQT 179
FLTV TV*P RRR TSQE M P PVTQT
Sbjct: 372 FLTVAWTV*PRPRRRRTSQEPMKPLPPVTQT 280
Score = 39.6 bits (80), Expect(3) = 9e-016
Identities = 17/47 (36%), Positives = 22/47 (46%)
Frame = +3 / +2
Query: 279 DPKNDHLRALDGXXXXXXXXXXXXXXPQSLAEAFSGCDGVFHAASPV 419
+ + HL+A+DG P S+ A G GVFH ASPV
Sbjct: 383 ESETKHLQAMDGANSRLRLFQMDLLEPASIRPAVEGARGVFHVASPV 523
Score = 38.2 bits (77), Expect = 0.32
Identities = 16/27 (59%), Positives = 17/27 (62%)
Frame = +2 / +1
Query: 200 RVHCLLARQAPPGEGLHSPRHGQEPCG 280
R+H LLAR P LH PRH QEP G
Sbjct: 301 RLHRLLARPPPSRSRLHRPRHRQEPPG 381
Score = 29.5 bits (58), Expect(2) = 9e-007
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = -2 / -1
Query: 421 VTGEAAWKTPSQPEKASARLCG 356
+TGEA WKTP P A G
Sbjct: 525 MTGEATWKTPRAPSTAGRMEAG 460
Score = 26.7 bits (52), Expect(3) = 9e-016
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +3 / +2
Query: 423 DDPEMMIEPAIRGTRYVMAAADD 491
D ++EPA++GT V+ AA D
Sbjct: 542 DPENELVEPALKGTLSVLRAAKD 610
>gb|CF756225.1|CF756225 DSAF1_4_G03.b1_A011 Drought-stressed after flowering Sorghum
bicolor cDNA clone DSAF1_4_G03_A011 5', mRNA sequence
Length = 537
Score = 62.9 bits (131), Expect(3) = 9e-016
Identities = 25/69 (36%), Positives = 40/69 (57%)
Frame = +3 / +1
Query: 477 AAADDAGVKRVVFTSSIGTVYMNPYRDPSKPVDDTCWSDLEYCKNTQNWYCYAKTVAEQG 656
AA + V+RVV TSS + +P + D+ CW+D++Y + WY +KT+AE+
Sbjct: 160 AAKEAGSVRRVVVTSSSCAIMPSPGWPAGEVRDERCWTDIDYSEKNGVWYPVSKTLAEKA 339
Query: 657 AWEVARKRG 683
AW+ A + G
Sbjct: 340 AWKFAEENG 366
Score = 30.9 bits (61), Expect(3) = 9e-016
Identities = 12/22 (54%), Positives = 14/22 (63%)
Frame = +3 / +1
Query: 363 SLAEAFSGCDGVFHAASPVTDD 428
+L +A GC GVFH ASP D
Sbjct: 28 ALIDAARGCSGVFHLASPCIVD 93
Score = 29.0 bits (57), Expect(3) = 9e-016
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +3 / +1
Query: 744 NASTDHVMKYLTGSATTYVNAAQAYVHVRDVAEAHV 851
N+S +++ L G Y + VHV DVA AH+
Sbjct: 427 NSSMSVLLRLLQGCTEEYKDIWMGAVHVEDVALAHL 534
>gb|CW185360.1|CW185360 104_603_11166021_116_36833_095 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11166021, DNA
sequence
Length = 721
Score = 85.8 bits (181), Expect = 1e-015
Identities = 30/70 (42%), Positives = 46/70 (65%)
Frame = +3 / -1
Query: 762 VMKYLTGSATTYVNAAQAYVHVRDVAEAHVRVYEAPHAHGRYICAESTLHRGDLCRVLAK 941
++ Y+ G+ TY NA +V V+DVA AHV VYE P AHGRY+C +H+ + +++ +
Sbjct: 658 IVSYVKGTRKTYPNAVSGFVDVQDVARAHVLVYETPTAHGRYLCIGEVVHQSEFIQMMIE 479
Query: 942 LFPEYPVPTK 971
LFP+Y + K
Sbjct: 478 LFPQYQITAK 449
Score = 44.1 bits (90), Expect = 0.005
Identities = 25/52 (48%), Positives = 25/52 (48%)
Frame = -2 / +3
Query: 955 YSGKSLARTRQRSPRCRVLSAQM*RPCAWGASYTRTCASATSLTCTYACAAF 800
Y GKS S C Q *RPCA G SYT T A ATS T T AF
Sbjct: 465 YCGKSSIII*INSDWCTTSPMQR*RPCAVGVSYTNTWARATSCTSTNPETAF 620
>gb|AW923197.1|AW923197 DG1_50_E07.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 392
Score = 85.4 bits (180), Expect(2) = 2e-015
Identities = 34/46 (73%), Positives = 38/46 (82%)
Frame = +3 / +3
Query: 177 TVCVTGAGGFIASWLVKRLLEKGYTVRGTVRNPVDPKNDHLRALDG 314
TVCVTGAGG+IASWLVK LL +GYTV TVR+P DPKN HL L+G
Sbjct: 207 TVCVTGAGGYIASWLVKLLLSRGYTVHATVRDPGDPKNAHLGRLEG 344
Score = 59.3 bits (123), Expect = 1e-007
Identities = 27/40 (67%), Positives = 28/40 (70%)
Frame = -2 / -2
Query: 295 WSFFGSTGFLTVPRTV*PFSRRRLTSQEAMNPPAPVTQTV 176
W+F GS G TV TV*P RR LTS EAM PPAPVT TV
Sbjct: 325 WAFLGSPGSRTVACTV*PRERRSLTSHEAM*PPAPVTHTV 206
Score = 50.1 bits (103), Expect = 8e-005
Identities = 25/59 (42%), Positives = 34/59 (57%)
Frame = -1 / -1
Query: 356 VQQVGAEEDETVDGAVKGPQVVVLWIHRVPDRAADCVALLQEALDEPGGNEPSSSGHAN 180
V+ VG E+ E + G + PQV VL I RV D VA +E LDEP G+ + + HA+
Sbjct: 386 VEHVGLEQPEVLRGPFQPPQVGVLGITRVADGGVHGVAAGEEELDEPRGDVAAGARHAH 210
Score = 35.4 bits (71), Expect = 2.2
Identities = 16/30 (53%), Positives = 19/30 (63%)
Frame = +2 / +2
Query: 200 RVHCLLARQAPPGEGLHSPRHGQEPCGSKE 289
R+H L+ARQAPP LH RH P S+E
Sbjct: 230 RLHRLVARQAPPLPRLHRARHRPRPG*SQE 319
Score = 21.7 bits (41), Expect(2) = 2e-015
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +1 / +1
Query: 838 PRRTSGC 858
PRRTSGC
Sbjct: 346 PRRTSGC 366
>gb|CW357175.1|CW357175 fsbb001f023k20f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f023k20, DNA
sequence
Length = 675
Score = 48.7 bits (100), Expect(3) = 2e-015
Identities = 20/36 (55%), Positives = 23/36 (63%)
Frame = +3 / +1
Query: 165 GQGRTVCVTGAGGFIASWLVKRLLEKGYTVRGTVRN 272
G VCVT GFI SWLV+ LL +GY V TV+N
Sbjct: 19 GGSSLVCVTFGTGFIGSWLVRLLLGRGYAVHATVKN 126
Score = 40.0 bits (81), Expect(2) = 3e-004
Identities = 20/31 (64%), Positives = 20/31 (64%)
Frame = -2 / -2
Query: 271 FLTVPRTV*PFSRRRLTSQEAMNPPAPVTQT 179
FLTV T *P RRR TSQE M P VTQT
Sbjct: 125 FLTVAWTA*PRPRRRRTSQEPMKPVPNVTQT 33
Score = 39.1 bits (79), Expect(3) = 2e-015
Identities = 16/29 (55%), Positives = 21/29 (72%)
Frame = +3 / +2
Query: 438 MIEPAIRGTRYVMAAADDAGVKRVVFTSS 524
++EPA++GT V+ AA D GV RVV SS
Sbjct: 566 LVEPALKGTLSVLRAAKDCGVGRVVMVSS 652
Score = 39.1 bits (79), Expect(3) = 2e-015
Identities = 17/42 (40%), Positives = 20/42 (47%)
Frame = +3 / +2
Query: 294 HLRALDGXXXXXXXXXXXXXXPQSLAEAFSGCDGVFHAASPV 419
HL+A+DG P S+ A G GVFH ASPV
Sbjct: 266 HLQAMDGANSRLRLFQMDLLEPASIRPAVEGARGVFHVASPV 391
Score = 29.5 bits (58), Expect(2) = 3e-004
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = -2 / -1
Query: 421 VTGEAAWKTPSQPEKASARLCG 356
+TGEA WKTP P A G
Sbjct: 393 MTGEATWKTPRAPSTAGRMEAG 328
>gb|CL183456.1|CL183456 104_396_10898188_114_31923_028 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10898188, DNA
sequence
Length = 549
Score = 55.1 bits (114), Expect(3) = 2e-015
Identities = 24/47 (51%), Positives = 26/47 (55%)
Frame = +3 / +1
Query: 279 DPKNDHLRALDGXXXXXXXXXXXXXXPQSLAEAFSGCDGVFHAASPV 419
DPKN HL ALDG S+A A +GCDGVFH ASPV
Sbjct: 61 DPKNAHLMALDGAGERLRLFKADLLDRASVAAAVAGCDGVFHVASPV 201
Score = 45.5 bits (93), Expect = 0.002
Identities = 24/47 (51%), Positives = 28/47 (59%)
Frame = -1 / -1
Query: 419 DRGGGVEDAVTAGEGLGKALWVQQVGAEEDETVDGAVKGPQVVVLWI 279
D G VEDAV A G G A VQQV E+ + + GAV+ QV VL I
Sbjct: 201 DGAGDVEDAVAASNGGGDAGTVQQVSLEQPQALPGAVQRHQVRVLGI 61
Score = 41.4 bits (84), Expect(3) = 2e-015
Identities = 18/47 (38%), Positives = 27/47 (57%)
Frame = +3 / +1
Query: 438 MIEPAIRGTRYVMAAADDAGVKRVVFTSSIGTVYMNPYRDPSKPVDD 578
++ PA+ GT+ ++ A+ A V+RVV SS+ V NP P V D
Sbjct: 337 IMAPAVTGTQNMLEASHAANVRRVVVVSSVAAVIANPTSIPDDAVPD 477
Score = 29.5 bits (58), Expect(3) = 2e-015
Identities = 8/15 (53%), Positives = 12/15 (80%)
Frame = +3 / +1
Query: 573 DDTCWSDLEYCKNTQ 617
D+ CWSD +YC+ T+
Sbjct: 475 DEDCWSDEDYCRATK 519
>gb|AW671852.1|AW671852 LG1_352_C05.b1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 570
Score = 60.6 bits (126), Expect(3) = 4e-015
Identities = 23/32 (71%), Positives = 26/32 (81%)
Frame = +3 / +3
Query: 180 VCVTGAGGFIASWLVKRLLEKGYTVRGTVRNP 275
VCVTG GGFIASWLVK LL +GY V T+R+P
Sbjct: 228 VCVTGGGGFIASWLVKLLLSRGYAVHATLRDP 323
Score = 41.8 bits (85), Expect(2) = 1e-007
Identities = 20/36 (55%), Positives = 20/36 (55%)
Frame = -2 / -3
Query: 274 GFLTVPRTV*PFSRRRLTSQEAMNPPAPVTQTVRPC 167
G V T *P R TSQEAMNPP PVT T C
Sbjct: 322 GSRRVAWTA*PRERSSFTSQEAMNPPPPVTHTRGSC 215
Score = 35.9 bits (72), Expect(2) = 1e-007
Identities = 17/52 (32%), Positives = 21/52 (40%)
Frame = -2 / -2
Query: 418 TGEAAWKTPSQPEKASARLCGXXXXXXXXXXXXXXXXXXXRWSFFGSTGFLT 263
TG A WKTP P A R+ RW+FFGS ++T
Sbjct: 470 TGVARWKTP*HP*TAGVRVSQSSTSALNRCRFSGALSSFFRWAFFGSHAWVT 315
Score = 35.0 bits (70), Expect(3) = 4e-015
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = +3 / +1
Query: 360 QSLAEAFSGCDGVFHAASPVTDD 428
++L A GC GVFH A+PV +D
Sbjct: 412 ETLTPAVQGCQGVFHLATPVPED 480
Score = 24.9 bits (48), Expect(3) = 4e-015
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = +3 / +1
Query: 261 TVRNPVDPKNDHLRALD 311
+V + DPKN HL+ LD
Sbjct: 313 SVTHACDPKNAHLKKLD 363
>gb|CW217859.1|CW217859 104_651_11195875_148_37457_076 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11195875, DNA
sequence
Length = 698
Score = 60.6 bits (126), Expect(4) = 4e-015
Identities = 23/32 (71%), Positives = 26/32 (81%)
Frame = +3 / -3
Query: 180 VCVTGAGGFIASWLVKRLLEKGYTVRGTVRNP 275
VCVTG GGFIASWLVK LL +GY V T+R+P
Sbjct: 654 VCVTGGGGFIASWLVKLLLSRGYAVHATLRDP 559
Score = 41.8 bits (85), Expect(2) = 6e-007
Identities = 20/36 (55%), Positives = 20/36 (55%)
Frame = -2 / +2
Query: 274 GFLTVPRTV*PFSRRRLTSQEAMNPPAPVTQTVRPC 167
G V T *P R TSQEAMNPP PVT T C
Sbjct: 560 GSRRVAWTA*PRERSSFTSQEAMNPPPPVTHTRGSC 667
Score = 35.0 bits (70), Expect(4) = 4e-015
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = +3 / -1
Query: 360 QSLAEAFSGCDGVFHAASPVTDD 428
++L A GC GVFH A+PV +D
Sbjct: 386 ETLTPAVQGCQGVFHLATPVPED 318
Score = 33.6 bits (67), Expect(2) = 6e-007
Identities = 16/47 (34%), Positives = 18/47 (38%)
Frame = -2 / +1
Query: 418 TGEAAWKTPSQPEKASARLCGXXXXXXXXXXXXXXXXXXXRWSFFGS 278
TG A WKTP P A R+ RW+FFGS
Sbjct: 328 TGVARWKTP*HP*TAGVRVSQSSTSALNRCRFSGALSSFFRWAFFGS 468
Score = 24.4 bits (47), Expect(4) = 4e-015
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = +3 / -2
Query: 438 MIEPAIRGTRYVMAAADDAGVKRVVFTSSIGTV 536
+++PA++GT V+ V +VV SS V
Sbjct: 106 VLDPAVKGT*NVLKVCSTLKVHKVVVMSSNAAV 8
Score = 23.5 bits (45), Expect(4) = 4e-015
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = +3 / -1
Query: 279 DPKNDHLRALD 311
DPKN HL+ LD
Sbjct: 467 DPKNAHLKKLD 435
>gb|CW098263.1|CW098263 104_464_11002911_148_34364_052 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11002911, DNA
sequence
Length = 683
Score = 60.6 bits (126), Expect(3) = 1e-014
Identities = 23/32 (71%), Positives = 26/32 (81%)
Frame = +3 / +1
Query: 180 VCVTGAGGFIASWLVKRLLEKGYTVRGTVRNP 275
VCVTG GGFIASWLVK LL +GY V T+R+P
Sbjct: 25 VCVTGGGGFIASWLVKLLLSRGYAVHATLRDP 120
Score = 41.8 bits (85), Expect(2) = 6e-007
Identities = 20/36 (55%), Positives = 20/36 (55%)
Frame = -2 / -1
Query: 274 GFLTVPRTV*PFSRRRLTSQEAMNPPAPVTQTVRPC 167
G V T *P R TSQEAMNPP PVT T C
Sbjct: 119 GSRRVAWTA*PRERSSFTSQEAMNPPPPVTHTRGSC 12
Score = 35.0 bits (70), Expect(3) = 1e-014
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = +3 / +2
Query: 360 QSLAEAFSGCDGVFHAASPVTDD 428
++L A GC GVFH A+PV +D
Sbjct: 293 ETLTPAVQGCQGVFHLATPVPED 361
Score = 33.6 bits (67), Expect(2) = 6e-007
Identities = 16/47 (34%), Positives = 18/47 (38%)
Frame = -2 / -3
Query: 418 TGEAAWKTPSQPEKASARLCGXXXXXXXXXXXXXXXXXXXRWSFFGS 278
TG A WKTP P A R+ RW+FFGS
Sbjct: 351 TGVARWKTP*HP*TAGVRVSQSSTSALNRCRFSGALSSFFRWAFFGS 211
Score = 23.5 bits (45), Expect(3) = 1e-014
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = +3 / +2
Query: 279 DPKNDHLRALD 311
DPKN HL+ LD
Sbjct: 212 DPKNAHLKKLD 244
>gb|CD225698.1|CD225698 CCC1_41_H04.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_41_H04_A007 3', mRNA sequence
Length = 645
Score = 74.4 bits (156), Expect(2) = 2e-014
Identities = 27/69 (39%), Positives = 44/69 (63%)
Frame = +3 / +1
Query: 774 LTGSATTYVNAAQAYVHVRDVAEAHVRVYEAPHAHGRYICAESTLHRGDLCRVLAKLFPE 953
L ++TY N++ +V+V+DVA AH+ YE P A+GRY E +H +L +++ K++P
Sbjct: 139 LINGSSTYPNSSFGWVNVKDVALAHILAYEIPSANGRYCMVERVVHYSELVKIIRKMYPT 318
Query: 954 YPVPTKCKD 980
+P KC D
Sbjct: 319 IRLPDKCAD 345
Score = 26.7 bits (52), Expect(2) = 2e-014
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = +3 / +1
Query: 633 AKTVAEQGAWEVARKRG 683
+KT+AEQ AW+ +R G
Sbjct: 1 SKTLAEQAAWKFSRDNG 51
>gb|CW065681.1|CW065681 104_312_10523281_114_30128 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10523281, DNA
sequence
Length = 673
Score = 52.4 bits (108), Expect(2) = 2e-011
Identities = 24/50 (48%), Positives = 33/50 (66%)
Frame = -1 / +2
Query: 428 VIGDRGGGVEDAVTAGEGLGKALWVQQVGAEEDETVDGAVKGPQVVVLWI 279
++GDR G VEDAV A +G A V+QVG E+ + + GAV+ QV VL +
Sbjct: 122 IVGDRAGDVEDAVAACDGRRHAAGVEQVGLEQAQPLRGAVQRQQVRVLGV 271
Score = 51.5 bits (106), Expect(3) = 2e-014
Identities = 23/49 (46%), Positives = 25/49 (51%)
Frame = +3 / -1
Query: 279 DPKNDHLRALDGXXXXXXXXXXXXXXPQSLAEAFSGCDGVFHAASPVTD 425
D KN HL ALDG S+A A +GCDGVFH A PV D
Sbjct: 271 DAKNAHLLALDGAAERLRLFKADLLDSGSVAAAVAGCDGVFHVACPVPD 125
Score = 50.1 bits (103), Expect(3) = 2e-014
Identities = 19/23 (82%), Positives = 21/23 (91%)
Frame = +3 / -3
Query: 177 TVCVTGAGGFIASWLVKRLLEKG 245
TVCVTGAGGF+ASWLV+RLL G
Sbjct: 503 TVCVTGAGGFVASWLVERLLAAG 435
Score = 41.8 bits (85), Expect(2) = 2e-011
Identities = 17/23 (73%), Positives = 18/23 (78%)
Frame = -2 / +1
Query: 244 PFSRRRLTSQEAMNPPAPVTQTV 176
P +RRR TS EA NPPAPVT TV
Sbjct: 436 PAARRRSTSHEATNPPAPVTHTV 504
Score = 35.4 bits (71), Expect(2) = 2e-004
Identities = 13/19 (68%), Positives = 15/19 (78%)
Frame = -2 / +3
Query: 418 TGEAAWKTPSQPEKASARL 362
TG+A WKTPSQP A+A L
Sbjct: 132 TGQATWKTPSQPATAAATL 188
Score = 35.0 bits (70), Expect(2) = 2e-004
Identities = 12/19 (63%), Positives = 17/19 (89%)
Frame = -1 / +3
Query: 236 QEALDEPGGNEPSSSGHAN 180
+EALDEP G+EP+ +GHA+
Sbjct: 444 EEALDEPRGHEPARAGHAH 500
Score = 21.7 bits (41), Expect(3) = 2e-014
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = +3 / -3
Query: 246 YTVRGTVRNPVDPKNDHLR 302
Y V GTVR+P + D LR
Sbjct: 431 YMVHGTVRDPGNLLIDTLR 375
>gb|CW299315.1|CW299315 104_782_11463048_116_36235_092 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11463048, DNA
sequence
Length = 684
Score = 52.4 bits (108), Expect(2) = 2e-011
Identities = 24/50 (48%), Positives = 33/50 (66%)
Frame = -1 / -1
Query: 428 VIGDRGGGVEDAVTAGEGLGKALWVQQVGAEEDETVDGAVKGPQVVVLWI 279
++GDR G VEDAV A +G A V+QVG E+ + + GAV+ QV VL +
Sbjct: 645 IVGDRAGDVEDAVAACDGRRHAAGVEQVGLEQAQPLRGAVQRQQVRVLGV 496
Score = 51.5 bits (106), Expect(3) = 2e-014
Identities = 23/49 (46%), Positives = 25/49 (51%)
Frame = +3 / +1
Query: 279 DPKNDHLRALDGXXXXXXXXXXXXXXPQSLAEAFSGCDGVFHAASPVTD 425
D KN HL ALDG S+A A +GCDGVFH A PV D
Sbjct: 496 DAKNAHLLALDGAAERLRLFKADLLDSGSVAAAVAGCDGVFHVACPVPD 642
Score = 50.1 bits (103), Expect(3) = 2e-014
Identities = 19/23 (82%), Positives = 21/23 (91%)
Frame = +3 / +3
Query: 177 TVCVTGAGGFIASWLVKRLLEKG 245
TVCVTGAGGF+ASWLV+RLL G
Sbjct: 264 TVCVTGAGGFVASWLVERLLAAG 332
Score = 41.8 bits (85), Expect(2) = 2e-011
Identities = 17/23 (73%), Positives = 18/23 (78%)
Frame = -2 / -3
Query: 244 PFSRRRLTSQEAMNPPAPVTQTV 176
P +RRR TS EA NPPAPVT TV
Sbjct: 331 PAARRRSTSHEATNPPAPVTHTV 263
Score = 35.4 bits (71), Expect(2) = 2e-004
Identities = 13/19 (68%), Positives = 15/19 (78%)
Frame = -2 / -2
Query: 418 TGEAAWKTPSQPEKASARL 362
TG+A WKTPSQP A+A L
Sbjct: 635 TGQATWKTPSQPATAAATL 579
Score = 35.0 bits (70), Expect(2) = 2e-004
Identities = 12/19 (63%), Positives = 17/19 (89%)
Frame = -1 / -2
Query: 236 QEALDEPGGNEPSSSGHAN 180
+EALDEP G+EP+ +GHA+
Sbjct: 323 EEALDEPRGHEPARAGHAH 267
Score = 21.7 bits (41), Expect(3) = 2e-014
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = +3 / +3
Query: 246 YTVRGTVRNPVDPKNDHLR 302
Y V GTVR+P + D LR
Sbjct: 336 YMVHGTVRDPGNLLIDTLR 392
>gb|CW470814.1|CW470814 fsbb001f224d21k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f224d21, DNA
sequence
Length = 589
Score = 69.3 bits (145), Expect(2) = 2e-014
Identities = 29/64 (45%), Positives = 38/64 (59%)
Frame = +3 / +1
Query: 438 MIEPAIRGTRYVMAAADDAGVKRVVFTSSIGTVYMNPYRDPSKPVDDTCWSDLEYCKNTQ 617
++EPA++GT V+ AA D GV RVV SS + NP P K +DD CW+D+E K Q
Sbjct: 343 LLEPAVKGTLNVLRAAKDCGVGRVVLMSSQAAMVPNPNWPPGKVIDDDCWADVELLKKLQ 522
Query: 618 NWYC 629
C
Sbjct: 523 VINC 534
Score = 34.5 bits (69), Expect(2) = 2e-014
Identities = 15/42 (35%), Positives = 19/42 (45%)
Frame = +3 / +3
Query: 294 HLRALDGXXXXXXXXXXXXXXPQSLAEAFSGCDGVFHAASPV 419
HL+A+ G P S+ A G GVFH ASP+
Sbjct: 87 HLQAMGGADARLRLFQMDLVDPASVQPAIEGAHGVFHLASPM 212
>gb|CL161049.1|CL161049 104_352_10805442_114_31826_114 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10805442, DNA
sequence
Length = 753
Score = 52.4 bits (108), Expect(2) = 2e-011
Identities = 24/50 (48%), Positives = 33/50 (66%)
Frame = -1 / -1
Query: 428 VIGDRGGGVEDAVTAGEGLGKALWVQQVGAEEDETVDGAVKGPQVVVLWI 279
++GDR G VEDAV A +G A V+QVG E+ + + GAV+ QV VL +
Sbjct: 714 IVGDRAGDVEDAVAACDGRRHAAGVEQVGLEQAQPLRGAVQRQQVRVLGV 565
Score = 51.5 bits (106), Expect(3) = 2e-014
Identities = 23/49 (46%), Positives = 25/49 (51%)
Frame = +3 / +1
Query: 279 DPKNDHLRALDGXXXXXXXXXXXXXXPQSLAEAFSGCDGVFHAASPVTD 425
D KN HL ALDG S+A A +GCDGVFH A PV D
Sbjct: 565 DAKNAHLLALDGAAERLRLFKADLLDSGSVAAAVAGCDGVFHVACPVPD 711
Score = 50.1 bits (103), Expect(3) = 2e-014
Identities = 19/23 (82%), Positives = 21/23 (91%)
Frame = +3 / +3
Query: 177 TVCVTGAGGFIASWLVKRLLEKG 245
TVCVTGAGGF+ASWLV+RLL G
Sbjct: 333 TVCVTGAGGFVASWLVERLLAAG 401
Score = 41.8 bits (85), Expect(2) = 2e-011
Identities = 17/23 (73%), Positives = 18/23 (78%)
Frame = -2 / -3
Query: 244 PFSRRRLTSQEAMNPPAPVTQTV 176
P +RRR TS EA NPPAPVT TV
Sbjct: 400 PAARRRSTSHEATNPPAPVTHTV 332
Score = 35.4 bits (71), Expect(2) = 2e-004
Identities = 13/19 (68%), Positives = 15/19 (78%)
Frame = -2 / -2
Query: 418 TGEAAWKTPSQPEKASARL 362
TG+A WKTPSQP A+A L
Sbjct: 704 TGQATWKTPSQPATAAATL 648
Score = 35.0 bits (70), Expect(2) = 2e-004
Identities = 12/19 (63%), Positives = 17/19 (89%)
Frame = -1 / -2
Query: 236 QEALDEPGGNEPSSSGHAN 180
+EALDEP G+EP+ +GHA+
Sbjct: 392 EEALDEPRGHEPARAGHAH 336
Score = 21.7 bits (41), Expect(3) = 2e-014
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = +3 / +3
Query: 246 YTVRGTVRNPVDPKNDHLR 302
Y V GTVR+P + D LR
Sbjct: 405 YMVHGTVRDPGNLLIDTLR 461
>gb|CW442451.1|CW442451 fsbb001f162c02k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f162c02, DNA
sequence
Length = 687
Score = 69.3 bits (145), Expect(2) = 2e-014
Identities = 29/64 (45%), Positives = 38/64 (59%)
Frame = +3 / +2
Query: 438 MIEPAIRGTRYVMAAADDAGVKRVVFTSSIGTVYMNPYRDPSKPVDDTCWSDLEYCKNTQ 617
++EPA++GT V+ AA D GV RVV SS + NP P K +DD CW+D+E K Q
Sbjct: 398 LLEPAVKGTLNVLRAAKDCGVGRVVLMSSQAAMVPNPNWPPGKVIDDDCWADVELLKKLQ 577
Query: 618 NWYC 629
C
Sbjct: 578 VINC 589
Score = 34.5 bits (69), Expect(2) = 2e-014
Identities = 15/42 (35%), Positives = 19/42 (45%)
Frame = +3 / +1
Query: 294 HLRALDGXXXXXXXXXXXXXXPQSLAEAFSGCDGVFHAASPV 419
HL+A+ G P S+ A G GVFH ASP+
Sbjct: 142 HLQAMGGADARLRLFQMDLVDPASVQPAIEGAHGVFHLASPM 267
>gb|CW307337.1|CW307337 104_795_11468086_148_36060_089 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11468086, DNA
sequence
Length = 633
Score = 57.9 bits (120), Expect(3) = 3e-014
Identities = 22/34 (64%), Positives = 27/34 (79%)
Frame = +3 / -2
Query: 180 VCVTGAGGFIASWLVKRLLEKGYTVRGTVRNPVD 281
V VTGA GF+ SWLV +LL+ GYTVR TVR+P +
Sbjct: 518 VVVTGASGFVGSWLVMKLLQAGYTVRATVRDPAN 417
Score = 38.2 bits (77), Expect(3) = 4e-006
Identities = 19/32 (59%), Positives = 20/32 (62%)
Frame = -2 / +1
Query: 274 GFLTVPRTV*PFSRRRLTSQEAMNPPAPVTQT 179
G TV RTV*P R +TSQE P APVT T
Sbjct: 424 GSRTVARTV*PAWRSFMTSQEPTKPDAPVTTT 519
Score = 30.4 bits (60), Expect(3) = 3e-014
Identities = 16/34 (47%), Positives = 19/34 (55%)
Frame = +3 / -2
Query: 477 AAADDAGVKRVVFTSSIGTVYMNPYRDPSKPVDD 578
AAA V+RVVFTSS GT + + P DD
Sbjct: 188 AAAGGGTVRRVVFTSSAGTCSVEERQRPVYGDDD 87
Score = 29.5 bits (58), Expect(3) = 3e-014
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +3 / -2
Query: 363 SLAEAFSGCDGVFHAASPV 419
S +A GC GVFH A+P+
Sbjct: 332 SFDDAIRGCTGVFHVATPL 276
Score = 26.3 bits (51), Expect(3) = 4e-006
Identities = 11/23 (47%), Positives = 17/23 (73%)
Frame = -1 / +3
Query: 410 GGVEDAVTAGEGLGKALWVQQVG 342
G VEDA A +G+ +A +++QVG
Sbjct: 285 GDVEDAGAAPDGVVEAAFLRQVG 353
Score = 24.9 bits (48), Expect(3) = 4e-006
Identities = 13/49 (26%), Positives = 21/49 (42%)
Frame = -2 / +1
Query: 532 VPMEDVNTTRFTPASSAAAIT*RVPRXXXXXXXXXXSVTGEAAWKTPSQ 386
VP E+V TTR T AAA + + + + +W + S+
Sbjct: 133 VPAEEVKTTRRTVPPPAAAASLQARKMLITPSTAGLITSFSGSWDSKSK 279
>gb|CW344753.1|CW344753 104_847_11488123_116_36201_072 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11488123, DNA
sequence
Length = 607
Score = 57.9 bits (120), Expect(3) = 3e-014
Identities = 22/34 (64%), Positives = 27/34 (79%)
Frame = +3 / +3
Query: 180 VCVTGAGGFIASWLVKRLLEKGYTVRGTVRNPVD 281
V VTGA GF+ SWLV +LL+ GYTVR TVR+P +
Sbjct: 105 VVVTGASGFVGSWLVMKLLQAGYTVRATVRDPAN 206
Score = 38.2 bits (77), Expect(3) = 4e-006
Identities = 19/32 (59%), Positives = 20/32 (62%)
Frame = -2 / -1
Query: 274 GFLTVPRTV*PFSRRRLTSQEAMNPPAPVTQT 179
G TV RTV*P R +TSQE P APVT T
Sbjct: 199 GSRTVARTV*PAWRSFMTSQEPTKPDAPVTTT 104
Score = 30.4 bits (60), Expect(3) = 3e-014
Identities = 16/34 (47%), Positives = 19/34 (55%)
Frame = +3 / +3
Query: 477 AAADDAGVKRVVFTSSIGTVYMNPYRDPSKPVDD 578
AAA V+RVVFTSS GT + + P DD
Sbjct: 435 AAAGGGTVRRVVFTSSAGTCSVEERQRPVYGDDD 536
Score = 29.5 bits (58), Expect(3) = 3e-014
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +3 / +3
Query: 363 SLAEAFSGCDGVFHAASPV 419
S +A GC GVFH A+P+
Sbjct: 291 SFDDAIRGCTGVFHVATPL 347
Score = 26.3 bits (51), Expect(3) = 4e-006
Identities = 11/23 (47%), Positives = 17/23 (73%)
Frame = -1 / -3
Query: 410 GGVEDAVTAGEGLGKALWVQQVG 342
G VEDA A +G+ +A +++QVG
Sbjct: 338 GDVEDAGAAPDGVVEAAFLRQVG 270
Score = 24.9 bits (48), Expect(3) = 4e-006
Identities = 13/49 (26%), Positives = 21/49 (42%)
Frame = -2 / -1
Query: 532 VPMEDVNTTRFTPASSAAAIT*RVPRXXXXXXXXXXSVTGEAAWKTPSQ 386
VP E+V TTR T AAA + + + + +W + S+
Sbjct: 490 VPAEEVKTTRRTVPPPAAAASLQARKMLITPSTAGLITSFSGSWDSKSK 344
>gb|BZ331519.1|BZ331519 hw10a10.b1 WGS-SbicolorF (JM107 adapted methyl filtered) Sorghum
bicolor genomic clone hw10a10 5', DNA sequence
Length = 728
Score = 66.1 bits (138), Expect(3) = 3e-014
Identities = 26/32 (81%), Positives = 28/32 (87%)
Frame = +3 / +1
Query: 180 VCVTGAGGFIASWLVKRLLEKGYTVRGTVRNP 275
VCVTGA GFIASWL+KRLLE GY V GTVR+P
Sbjct: 19 VCVTGASGFIASWLIKRLLESGYHVLGTVRDP 114
Score = 51.9 bits (107), Expect(2) = 1e-008
Identities = 24/33 (72%), Positives = 25/33 (75%)
Frame = -2 / -1
Query: 274 GFLTVPRTV*PFSRRRLTSQEAMNPPAPVTQTV 176
G LTVPRT P SR RL SQEAM P APVTQT+
Sbjct: 113 GSLTVPRTWYPDSRSRLMSQEAMKPDAPVTQTL 15
Score = 33.6 bits (67), Expect(3) = 3e-014
Identities = 16/45 (35%), Positives = 19/45 (42%)
Frame = +3 / +2
Query: 285 KNDHLRALDGXXXXXXXXXXXXXXPQSLAEAFSGCDGVFHAASPV 419
K HL L+G S +A C+GVFH ASPV
Sbjct: 260 KVGHLWVLEGAKERLQLVRADLLEEGSFDDAVMACEGVFHTASPV 394
Score = 32.7 bits (65), Expect(2) = 1e-008
Identities = 12/20 (60%), Positives = 16/20 (80%)
Frame = -2 / -3
Query: 421 VTGEAAWKTPSQPEKASARL 362
+TG+A WKTPSQ AS++L
Sbjct: 396 MTGDAVWKTPSQAITASSKL 337
Score = 30.4 bits (60), Expect(2) = 0.24
Identities = 15/47 (31%), Positives = 28/47 (59%)
Frame = -1 / -2
Query: 434 LRVIGDRGGGVEDAVTAGEGLGKALWVQQVGAEEDETVDGAVKGPQV 294
+R DR VEDA+T+ + KA ++Q+V + + + + A + P+V
Sbjct: 409 IRFSDDRRCSVEDALTSHHSVVKAPFLQEVSSHKLQPLLCAFQNPEV 269
Score = 29.0 bits (57), Expect(2) = 0.24
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = -1 / -3
Query: 272 VPDRAADCVALLQEALDEPGGNE 204
V D + D V L++ LDEPGG+E
Sbjct: 111 VSDCSEDMVPRLKKPLDEPGGDE 43
Score = 23.1 bits (44), Expect(3) = 3e-014
Identities = 6/11 (54%), Positives = 9/11 (81%)
Frame = +3 / +1
Query: 579 TCWSDLEYCKN 611
T WS +EYC++
Sbjct: 691 TSWSSIEYCES 723
>gb|BI141675.1|BI141675 IP1_55_E06.b1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 376
Score = 66.6 bits (139), Expect(2) = 4e-014
Identities = 27/36 (75%), Positives = 30/36 (83%)
Frame = +3 / +3
Query: 180 VCVTGAGGFIASWLVKRLLEKGYTVRGTVRNPVDPK 287
VCVTGA GFIASWL+KRLLE GY V GTVR+P + K
Sbjct: 48 VCVTGASGFIASWLIKRLLESGYHVLGTVRDPGNHK 155
Score = 51.9 bits (107), Expect(2) = 1e-009
Identities = 24/33 (72%), Positives = 25/33 (75%)
Frame = -2 / -1
Query: 274 GFLTVPRTV*PFSRRRLTSQEAMNPPAPVTQTV 176
G LTVPRT P SR RL SQEAM P APVTQT+
Sbjct: 142 GSLTVPRTWYPDSRSRLMSQEAMKPDAPVTQTL 44
Score = 33.6 bits (67), Expect(2) = 4e-014
Identities = 16/45 (35%), Positives = 19/45 (42%)
Frame = +3 / +3
Query: 285 KNDHLRALDGXXXXXXXXXXXXXXPQSLAEAFSGCDGVFHAASPV 419
K HL L+G S +A C+GVFH ASPV
Sbjct: 156 KVGHLWVLEGAKERLQLVRADLLEEGSFDDAVMACEGVFHTASPV 290
Score = 32.7 bits (65), Expect(2) = 1e-009
Identities = 12/20 (60%), Positives = 16/20 (80%)
Frame = -2 / -1
Query: 421 VTGEAAWKTPSQPEKASARL 362
+TG+A WKTPSQ AS++L
Sbjct: 292 MTGDAVWKTPSQAITASSKL 233
Score = 30.4 bits (60), Expect(2) = 0.029
Identities = 15/47 (31%), Positives = 28/47 (59%)
Frame = -1 / -3
Query: 434 LRVIGDRGGGVEDAVTAGEGLGKALWVQQVGAEEDETVDGAVKGPQV 294
+R DR VEDA+T+ + KA ++Q+V + + + + A + P+V
Sbjct: 305 IRFSDDRRCSVEDALTSHHSVVKAPFLQEVSSHKLQPLLCAFQNPEV 165
Score = 29.0 bits (57), Expect(2) = 0.029
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = -1 / -3
Query: 272 VPDRAADCVALLQEALDEPGGNE 204
V D + D V L++ LDEPGG+E
Sbjct: 140 VSDCSEDMVPRLKKPLDEPGGDE 72
>gb|AW678617.1|AW678617 WS1_1_A12.b1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA, mRNA
sequence
Length = 515
Score = 80.8 bits (170), Expect = 5e-014
Identities = 32/41 (78%), Positives = 36/41 (87%)
Frame = +3 / +2
Query: 165 GQGRTVCVTGAGGFIASWLVKRLLEKGYTVRGTVRNPVDPK 287
G G+TVCVTGA G+IASWLVK LLEKGYTV+GTVRNP P+
Sbjct: 377 GNGQTVCVTGAAGYIASWLVKMLLEKGYTVKGTVRNPG*PE 499
Score = 57.9 bits (120), Expect = 4e-007
Identities = 27/40 (67%), Positives = 27/40 (67%)
Frame = -2 / -3
Query: 283 GSTGFLTVPRTV*PFSRRRLTSQEAMNPPAPVTQTVRPCP 164
G GFLTVP TV PFS LTS EAM P APVT TV P P
Sbjct: 495 GHPGFLTVPLTVYPFSSSILTSHEAMYPAAPVTHTVCPFP 376
Score = 39.6 bits (80), Expect = 0.13
Identities = 16/31 (51%), Positives = 22/31 (70%)
Frame = -1 / -2
Query: 272 VPDRAADCVALLQEALDEPGGNEPSSSGHAN 180
VPD A D V+LL++ LDEP G+ P +G A+
Sbjct: 484 VPDGALDSVSLLEQHLDEPRGDVPGRAGDAH 392
Score = 33.6 bits (67), Expect = 7.8
Identities = 14/25 (56%), Positives = 16/25 (64%)
Frame = +2 / +1
Query: 200 RVHCLLARQAPPGEGLHSPRHGQEP 274
RVH L+ARQ EG+H H QEP
Sbjct: 412 RVHRLVARQDAAREGIHCQGHRQEP 486
>gb|CD227332.1|CD227332 CCC1_50_B06.g1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_50_B06_A007 5', mRNA sequence
Length = 625
Score = 64.8 bits (135), Expect(2) = 6e-014
Identities = 27/45 (60%), Positives = 32/45 (71%)
Frame = +3 / +1
Query: 159 SSGQGRTVCVTGAGGFIASWLVKRLLEKGYTVRGTVRNPVDPKND 293
S G+ +T CVTG G+IAS LVK LL+KGY V+ TVRNP D D
Sbjct: 34 SKGRKKTACVTGGNGYIASALVKMLLDKGYAVKTTVRNPDDMDKD 168
Score = 39.1 bits (79), Expect(3) = 1e-007
Identities = 20/35 (57%), Positives = 21/35 (60%)
Frame = -2 / -3
Query: 280 STGFLTVPRTV*PFSRRRLTSQEAMNPPAPVTQTV 176
S+GFLTV T *P S TS EAM P PVT V
Sbjct: 155 SSGFLTVVLTA*PLSSSIFTSAEAM*PLPPVTHAV 51
Score = 37.7 bits (76), Expect(2) = 6e-014
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = +3 / +1
Query: 498 VKRVVFTSSIGTVYMNPYRDPSKPVDDTCWSDLEY 602
V+RVV TS+ T+ + P +D+ WSDL+Y
Sbjct: 391 VRRVVLTSAASTICIRPLEGDGHVLDEHSWSDLDY 495
Score = 32.7 bits (65), Expect(3) = 1e-007
Identities = 17/44 (38%), Positives = 25/44 (56%)
Frame = -1 / -2
Query: 416 RGGGVEDAVTAGEGLGKALWVQQVGAEEDETVDGAVKGPQVVVL 285
R G E V AG+G+ +A ++ QVGAE+ + + QV VL
Sbjct: 294 RSGDEEGVVAAGDGVVEAAFLVQVGAEDLQVAERLQLHNQVGVL 163
Score = 23.1 bits (44), Expect(3) = 1e-007
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = -2 / -3
Query: 598 SRSLQQVSSTGLLGSR*GFMYTVPMEDVNTTRFT 497
SRS Q+ SS+ G M V +V TTR T
Sbjct: 491 SRSDQECSSSTWPSPSSGRMQMVEAAEVRTTRLT 390
>gb|CL173566.1|CL173566 104_377_10890963_116_31793_099 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10890963, DNA
sequence
Length = 772
Score = 52.4 bits (108), Expect(4) = 6e-014
Identities = 21/60 (35%), Positives = 33/60 (55%)
Frame = +3 / -2
Query: 438 MIEPAIRGTRYVMAAADDAGVKRVVFTSSIGTVYMNPYRDPSKPVDDTCWSDLEYCKNTQ 617
+++PA++GT V+ V +VV SS V NP + D++CWSD E+CK +
Sbjct: 261 VLDPAVKGT*NVLKVCSTLKVHKVVVMSSNAAVTSNPNWPQDRLKDESCWSDTEFCKEKE 82
Score = 35.0 bits (70), Expect(4) = 6e-014
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = +3 / -1
Query: 360 QSLAEAFSGCDGVFHAASPVTDD 428
++L A GC GVFH A+PV +D
Sbjct: 541 ETLTPAVQGCQGVFHLATPVPED 473
Score = 33.6 bits (67), Expect = 7.8
Identities = 16/47 (34%), Positives = 18/47 (38%)
Frame = -2 / +3
Query: 418 TGEAAWKTPSQPEKASARLCGXXXXXXXXXXXXXXXXXXXRWSFFGS 278
TG A WKTP P A R+ RW+FFGS
Sbjct: 483 TGVARWKTP*HP*TAGVRVSQSSTSALNRCRFSGALSSFFRWAFFGS 623
Score = 29.0 bits (57), Expect(4) = 6e-014
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = +3 / -3
Query: 219 LVKRLLEKGYTVRGTVRNP 275
LVK LL +GY V T+R+P
Sbjct: 770 LVKLLLSRGYAVHATLRDP 714
Score = 23.5 bits (45), Expect(4) = 6e-014
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = +3 / -1
Query: 279 DPKNDHLRALD 311
DPKN HL+ LD
Sbjct: 622 DPKNAHLKKLD 590
>gb|CW119145.1|CW119145 104_496_11108601_116_34636_047 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11108601, DNA
sequence
Length = 579
Score = 80.3 bits (169), Expect = 7e-014
Identities = 31/37 (83%), Positives = 34/37 (91%)
Frame = +3 / -3
Query: 165 GQGRTVCVTGAGGFIASWLVKRLLEKGYTVRGTVRNP 275
G G+TVCVTGA G+IASWLVK LLEKGYTV+GTVRNP
Sbjct: 157 GNGQTVCVTGAAGYIASWLVKMLLEKGYTVKGTVRNP 47
Score = 56.1 bits (116), Expect = 1e-006
Identities = 26/37 (70%), Positives = 26/37 (70%)
Frame = -2 / +3
Query: 274 GFLTVPRTV*PFSRRRLTSQEAMNPPAPVTQTVRPCP 164
GFLTVP TV PFS LTS EAM P APVT TV P P
Sbjct: 48 GFLTVPLTVYPFSSSILTSHEAMYPAAPVTHTVCPFP 158
Score = 35.0 bits (70), Expect = 3.0
Identities = 14/31 (45%), Positives = 21/31 (67%)
Frame = -1 / +2
Query: 272 VPDRAADCVALLQEALDEPGGNEPSSSGHAN 180
VPD A D V+LL++ LD+P G+ P + A+
Sbjct: 50 VPDGALDSVSLLEQHLDKPRGDVPGRASDAH 142
>gb|CW134363.1|CW134363 104_518_11117266_148_34819_039 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11117266, DNA
sequence
Length = 619
Score = 80.3 bits (169), Expect = 7e-014
Identities = 31/37 (83%), Positives = 34/37 (91%)
Frame = +3 / -2
Query: 165 GQGRTVCVTGAGGFIASWLVKRLLEKGYTVRGTVRNP 275
G G+TVCVTGA G+IASWLVK LLEKGYTV+GTVRNP
Sbjct: 162 GNGQTVCVTGAAGYIASWLVKMLLEKGYTVKGTVRNP 52
Score = 56.1 bits (116), Expect = 1e-006
Identities = 26/37 (70%), Positives = 26/37 (70%)
Frame = -2 / +2
Query: 274 GFLTVPRTV*PFSRRRLTSQEAMNPPAPVTQTVRPCP 164
GFLTVP TV PFS LTS EAM P APVT TV P P
Sbjct: 53 GFLTVPLTVYPFSSSILTSHEAMYPAAPVTHTVCPFP 163
Score = 39.6 bits (80), Expect = 0.13
Identities = 16/31 (51%), Positives = 22/31 (70%)
Frame = -1 / +1
Query: 272 VPDRAADCVALLQEALDEPGGNEPSSSGHAN 180
VPD A D V+LL++ LDEP G+ P +G A+
Sbjct: 55 VPDGALDSVSLLEQHLDEPRGDVPGRAGDAH 147
Score = 33.6 bits (67), Expect = 7.8
Identities = 14/25 (56%), Positives = 16/25 (64%)
Frame = +2 / -1
Query: 200 RVHCLLARQAPPGEGLHSPRHGQEP 274
RVH L+ARQ EG+H H QEP
Sbjct: 127 RVHRLVARQDAAREGIHCQGHRQEP 53
>gb|CW183096.1|CW183096 104_598_11164429_148_36664_049 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11164429, DNA
sequence
Length = 677
Score = 80.3 bits (169), Expect = 7e-014
Identities = 31/37 (83%), Positives = 34/37 (91%)
Frame = +3 / -3
Query: 165 GQGRTVCVTGAGGFIASWLVKRLLEKGYTVRGTVRNP 275
G G+TVCVTGA G+IASWLVK LLEKGYTV+GTVRNP
Sbjct: 225 GNGQTVCVTGAAGYIASWLVKMLLEKGYTVKGTVRNP 115
Score = 56.1 bits (116), Expect = 1e-006
Identities = 26/37 (70%), Positives = 26/37 (70%)
Frame = -2 / +2
Query: 274 GFLTVPRTV*PFSRRRLTSQEAMNPPAPVTQTVRPCP 164
GFLTVP TV PFS LTS EAM P APVT TV P P
Sbjct: 116 GFLTVPLTVYPFSSSILTSHEAMYPAAPVTHTVCPFP 226
Score = 39.6 bits (80), Expect = 0.13
Identities = 16/31 (51%), Positives = 22/31 (70%)
Frame = -1 / +1
Query: 272 VPDRAADCVALLQEALDEPGGNEPSSSGHAN 180
VPD A D V+LL++ LDEP G+ P +G A+
Sbjct: 118 VPDGALDSVSLLEQHLDEPRGDVPGRAGDAH 210
Score = 33.6 bits (67), Expect = 7.8
Identities = 14/25 (56%), Positives = 16/25 (64%)
Frame = +2 / -2
Query: 200 RVHCLLARQAPPGEGLHSPRHGQEP 274
RVH L+ARQ EG+H H QEP
Sbjct: 190 RVHRLVARQDAAREGIHCQGHRQEP 116
>gb|CW427351.1|CW427351 fsbb001f139e20f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f139e20, DNA
sequence
Length = 596
Score = 80.3 bits (169), Expect = 7e-014
Identities = 31/37 (83%), Positives = 34/37 (91%)
Frame = +3 / +3
Query: 165 GQGRTVCVTGAGGFIASWLVKRLLEKGYTVRGTVRNP 275
G G+TVCVTGA G+IASWLVK LLEKGYTV+GTVRNP
Sbjct: 420 GNGQTVCVTGAAGYIASWLVKMLLEKGYTVKGTVRNP 530
Score = 56.1 bits (116), Expect = 1e-006
Identities = 26/37 (70%), Positives = 26/37 (70%)
Frame = -2 / -2
Query: 274 GFLTVPRTV*PFSRRRLTSQEAMNPPAPVTQTVRPCP 164
GFLTVP TV PFS LTS EAM P APVT TV P P
Sbjct: 529 GFLTVPLTVYPFSSSILTSHEAMYPAAPVTHTVCPFP 419
Score = 39.6 bits (80), Expect = 0.13
Identities = 16/31 (51%), Positives = 22/31 (70%)
Frame = -1 / -1
Query: 272 VPDRAADCVALLQEALDEPGGNEPSSSGHAN 180
VPD A D V+LL++ LDEP G+ P +G A+
Sbjct: 527 VPDGALDSVSLLEQHLDEPRGDVPGRAGDAH 435
Score = 33.6 bits (67), Expect = 7.8
Identities = 14/25 (56%), Positives = 16/25 (64%)
Frame = +2 / +2
Query: 200 RVHCLLARQAPPGEGLHSPRHGQEP 274
RVH L+ARQ EG+H H QEP
Sbjct: 455 RVHRLVARQDAAREGIHCQGHRQEP 529
>gb|CW087332.1|CW087332 104_431_10947561_116_32569_033 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10947561, DNA
sequence
Length = 735
Score = 59.3 bits (123), Expect(3) = 8e-014
Identities = 23/38 (60%), Positives = 29/38 (76%)
Frame = +3 / -3
Query: 162 SGQGRTVCVTGAGGFIASWLVKRLLEKGYTVRGTVRNP 275
+G+ +T CVTG G+IAS L+K LLE GY V+ TVRNP
Sbjct: 718 AGKQKTACVTGGNGYIASVLIKMLLENGYAVKTTVRNP 605
Score = 39.1 bits (79), Expect(3) = 3e-006
Identities = 20/33 (60%), Positives = 20/33 (60%)
Frame = -2 / +3
Query: 274 GFLTVPRTV*PFSRRRLTSQEAMNPPAPVTQTV 176
GFLTV T *PFS L S EAM P PVT V
Sbjct: 606 GFLTVVFTA*PFSSSILMSTEAMYPLPPVTHAV 704
Score = 37.7 bits (76), Expect = 0.45
Identities = 16/30 (53%), Positives = 21/30 (70%)
Frame = -1 / +2
Query: 272 VPDRAADCVALLQEALDEPGGNEPSSSGHA 183
VPDR VA+L++ LDE G+ P +SGHA
Sbjct: 608 VPDRRLHGVAILEQHLDEHRGDVPVTSGHA 697
Score = 35.4 bits (71), Expect(3) = 8e-014
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +3 / -2
Query: 498 VKRVVFTSSIGTVYMNPYRDPSKPVDDTCWSDLEY 602
VKRV+ TSS V P + +D+ W+D+EY
Sbjct: 161 VKRVILTSSAAAVAGRPLQGGGHVLDEESWTDVEY 57
Score = 33.6 bits (67), Expect(3) = 3e-006
Identities = 17/39 (43%), Positives = 23/39 (58%)
Frame = -1 / +2
Query: 434 LRVIGDRGGGVEDAVTAGEGLGKALWVQQVGAEEDETVD 318
LR+ R G E V AG+GL +A + QVGAE+ + D
Sbjct: 332 LRMEVHRSGDEEGVVAAGDGLVEAAFF*QVGAEDCQGAD 448
Score = 26.7 bits (52), Expect(3) = 8e-014
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +3 / -2
Query: 438 MIEPAIRGTRYVMAAADDAGVKRVVFTSS 524
+IEPA+RG VM + AG + V +S
Sbjct: 224 LIEPAVRGILNVMRSCAKAGTVKRVILTS 138
Score = 22.1 bits (42), Expect(3) = 3e-006
Identities = 11/26 (42%), Positives = 13/26 (50%)
Frame = -1 / +3
Query: 1142 VGHGLVLSEARAACLSPGGW*PSRRG 1065
VG GL++ AA P G RRG
Sbjct: 66 VGPGLLVQNVAAALQRPAGDCSRRRG 143
>gb|BG240109.1|BG240109 OV1_18_A05.b1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA
sequence
Length = 458
Score = 57.9 bits (120), Expect(2) = 9e-014
Identities = 19/37 (51%), Positives = 26/37 (70%)
Frame = +3 / +3
Query: 573 DDTCWSDLEYCKNTQNWYCYAKTVAEQGAWEVARKRG 683
D+ CWSD +YC+ T+NWYC +KTVAE+ A + G
Sbjct: 174 DEDCWSDEDYCRATKNWYCLSKTVAEREALAYGERTG 284
Score = 40.9 bits (83), Expect(2) = 9e-014
Identities = 18/47 (38%), Positives = 27/47 (57%)
Frame = +3 / +3
Query: 438 MIEPAIRGTRYVMAAADDAGVKRVVFTSSIGTVYMNPYRDPSKPVDD 578
++ PA+ GT+ ++ A+ A V+RVV SS+ V NP P V D
Sbjct: 36 IMAPAVTGTQNMLEASHAANVRRVVVVSSVAAVIANPTSIPDDAVAD 176
Score = 31.8 bits (63), Expect(2) = 0.021
Identities = 18/26 (69%), Positives = 18/26 (69%)
Frame = -2 / -2
Query: 649 SATVLA*QYQFWVFLQYSRSLQQVSS 572
SATVL QYQF V LQ S S QQ SS
Sbjct: 250 SATVLERQYQFLVALQ*SSSDQQSSS 173
Score = 28.1 bits (55), Expect(2) = 0.021
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = -2 / -2
Query: 790 VADPVRYFITWSVLAFTVGC 731
V P RYF ++AFTVGC
Sbjct: 391 VFSPFRYFTKPMLVAFTVGC 332
>gb|CW338278.1|CW338278 104_838_11484658_148_36128_039 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11484658, DNA
sequence
Length = 672
Score = 51.5 bits (106), Expect(2) = 2e-013
Identities = 20/23 (86%), Positives = 21/23 (91%)
Frame = +3 / +1
Query: 177 TVCVTGAGGFIASWLVKRLLEKG 245
TVCVTGAGGFIASWLV+RLL G
Sbjct: 250 TVCVTGAGGFIASWLVQRLLSSG 318
Score = 49.6 bits (102), Expect(2) = 2e-013
Identities = 22/47 (46%), Positives = 24/47 (51%)
Frame = +3 / +2
Query: 279 DPKNDHLRALDGXXXXXXXXXXXXXXPQSLAEAFSGCDGVFHAASPV 419
DPK HL ALDG +A A +GCDGVFH ASPV
Sbjct: 485 DPKYAHLMALDGAVERLRLFKADMLDHAGVAAAVAGCDGVFHVASPV 625
Score = 43.7 bits (89), Expect(2) = 2e-008
Identities = 17/23 (73%), Positives = 18/23 (78%)
Frame = -2 / -2
Query: 244 PFSRRRLTSQEAMNPPAPVTQTV 176
P RRR TS +AM PPAPVTQTV
Sbjct: 317 PLERRRCTSHDAMKPPAPVTQTV 249
Score = 40.5 bits (82), Expect(2) = 2e-008
Identities = 21/45 (46%), Positives = 26/45 (57%)
Frame = -1 / -3
Query: 419 DRGGGVEDAVTAGEGLGKALWVQQVGAEEDETVDGAVKGPQVVVL 285
D G VEDAV AG G A VQ V E+ + + GA++ QV VL
Sbjct: 625 DGAGNVEDAVAAGHGSRDAGVVQHVRLEQPQPLHGAIQRHQVRVL 491
Score = 31.8 bits (63), Expect(2) = 0.41
Identities = 12/17 (70%), Positives = 13/17 (76%)
Frame = -2 / -1
Query: 418 TGEAAWKTPSQPEKASA 368
TG A WKTPSQP A+A
Sbjct: 624 TGLATWKTPSQPATAAA 574
Score = 26.7 bits (52), Expect(2) = 0.41
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = -1 / -1
Query: 254 DCVALLQEALDEPGGNEPSSSGHAN 180
D A +EAL +P +E +S+ HAN
Sbjct: 327 DVAAAGEEALHQPRRDEATSASHAN 253
>gb|CD234981.1|CD234981 SS1_19_A07.g1_A012 Salt-stressed seedlings Sorghum bicolor cDNA
clone SS1_19_A07_A012 5', mRNA sequence
Length = 565
Score = 57.9 bits (120), Expect(3) = 2e-013
Identities = 22/34 (64%), Positives = 27/34 (79%)
Frame = +3 / +1
Query: 180 VCVTGAGGFIASWLVKRLLEKGYTVRGTVRNPVD 281
V VTGA GF+ SWLV +LL+ GYTVR TVR+P +
Sbjct: 106 VVVTGASGFVGSWLVMKLLQAGYTVRATVRDPAN 207
Score = 38.2 bits (77), Expect(2) = 2e-004
Identities = 19/32 (59%), Positives = 20/32 (62%)
Frame = -2 / -3
Query: 274 GFLTVPRTV*PFSRRRLTSQEAMNPPAPVTQT 179
G TV RTV*P R +TSQE P APVT T
Sbjct: 200 GSRTVARTV*PAWRSFMTSQEPTKPDAPVTTT 105
Score = 29.5 bits (58), Expect(3) = 2e-013
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +3 / +1
Query: 363 SLAEAFSGCDGVFHAASPV 419
S +A GC GVFH A+P+
Sbjct: 292 SFDDAIRGCTGVFHVATPL 348
Score = 29.0 bits (57), Expect(2) = 2e-004
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = -2 / -3
Query: 415 GEAAWKTPSQPEKASARL 362
G A WKTP QP AS++L
Sbjct: 344 GVATWKTPVQPLMASSKL 291
Score = 27.6 bits (54), Expect(3) = 2e-013
Identities = 15/34 (44%), Positives = 18/34 (52%)
Frame = +3 / +1
Query: 477 AAADDAGVKRVVFTSSIGTVYMNPYRDPSKPVDD 578
A A V+RVVFTSS GT + + P DD
Sbjct: 436 ADAGGGTVRRVVFTSSAGTCSVEERQRPVYGDDD 537
>gb|CD213720.1|CD213720 HS1_52_G04.g1_A012 Heat-shocked seedlings Sorghum bicolor cDNA
clone HS1_52_G04_A012 5', mRNA sequence
Length = 579
Score = 50.6 bits (104), Expect(2) = 3e-013
Identities = 22/47 (46%), Positives = 25/47 (53%)
Frame = +3 / +1
Query: 279 DPKNDHLRALDGXXXXXXXXXXXXXXPQSLAEAFSGCDGVFHAASPV 419
D KN HL A+DG S+A A +GCDGVFH ASPV
Sbjct: 379 DAKNAHLAAMDGAAARLRLFRADLLYYGSVAAAVAGCDGVFHVASPV 519
Score = 50.6 bits (104), Expect(2) = 6e-010
Identities = 26/48 (54%), Positives = 30/48 (62%)
Frame = -1 / -1
Query: 422 GDRGGGVEDAVTAGEGLGKALWVQQVGAEEDETVDGAVKGPQVVVLWI 279
GDRG VEDAV AG+G A VQQVG E+ + GAV QV VL +
Sbjct: 522 GDRGRDVEDAVAAGDGRRHAAVVQQVGPEQAQPGRGAVHRRQVRVLGV 379
Score = 49.6 bits (102), Expect(2) = 3e-013
Identities = 19/25 (76%), Positives = 21/25 (84%)
Frame = +3 / +2
Query: 171 GRTVCVTGAGGFIASWLVKRLLEKG 245
G VCVTGAGGF+ASWLV+RLL G
Sbjct: 152 GTAVCVTGAGGFVASWLVERLLAGG 226
Score = 38.2 bits (77), Expect(2) = 6e-010
Identities = 16/25 (64%), Positives = 17/25 (68%)
Frame = -2 / -1
Query: 244 PFSRRRLTSQEAMNPPAPVTQTVRP 170
P +RRR TS EA PPAPVT T P
Sbjct: 225 PPARRRSTSHEATKPPAPVTHTAVP 151
Score = 35.4 bits (71), Expect(2) = 6e-004
Identities = 13/19 (68%), Positives = 15/19 (78%)
Frame = -2 / -2
Query: 418 TGEAAWKTPSQPEKASARL 362
TG+A WKTPSQP A+A L
Sbjct: 518 TGDATWKTPSQPATAAATL 462
Score = 32.7 bits (65), Expect(2) = 6e-004
Identities = 12/19 (63%), Positives = 16/19 (84%)
Frame = -1 / -3
Query: 236 QEALDEPGGNEPSSSGHAN 180
+EALDEP G+E S +GHA+
Sbjct: 217 EEALDEPRGHEASRAGHAH 161
>gb|CW180918.1|CW180918 104_595_11163212_116_36642_070 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11163212, DNA
sequence
Length = 730
Score = 56.1 bits (116), Expect(3) = 3e-013
Identities = 23/48 (47%), Positives = 31/48 (64%)
Frame = +3 / -2
Query: 819 VHVRDVAEAHVRVYEAPHAHGRYICAESTLHRGDLCRVLAKLFPEYPV 962
V VRDVA + + +YE P A GR++C ES DL +A L+PE+PV
Sbjct: 270 VDVRDVAHSLIMLYENPSAQGRHLCMESAERLVDLANKIADLYPEHPV 127
Score = 36.3 bits (73), Expect(3) = 3e-013
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = +3 / -1
Query: 603 CKNTQNWYCYAKTVAEQGAWEVARK 677
C Q WY +KT+AE+ AW+ A K
Sbjct: 592 CSELQLWYSVSKTLAEKAAWDFAEK 518
Score = 27.2 bits (53), Expect(3) = 3e-013
Identities = 9/20 (45%), Positives = 11/20 (55%)
Frame = +3 / -3
Query: 570 VDDTCWSDLEYCKNTQNWYC 629
+DD CW+D E K Q C
Sbjct: 725 IDDDCWADAELLKKLQVINC 666
>gb|CW332609.1|CW332609 104_830_11481507_148_36035_010 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11481507, DNA
sequence
Length = 628
Score = 50.6 bits (104), Expect(2) = 3e-013
Identities = 22/47 (46%), Positives = 25/47 (53%)
Frame = +3 / +2
Query: 279 DPKNDHLRALDGXXXXXXXXXXXXXXPQSLAEAFSGCDGVFHAASPV 419
D KN HL A+DG S+A A +GCDGVFH ASPV
Sbjct: 344 DAKNAHLAAMDGAAARLRLFRADLLDYGSVAAAVAGCDGVFHVASPV 484
Score = 49.6 bits (102), Expect(2) = 3e-013
Identities = 19/25 (76%), Positives = 21/25 (84%)
Frame = +3 / +2
Query: 171 GRTVCVTGAGGFIASWLVKRLLEKG 245
G VCVTGAGGF+ASWLV+RLL G
Sbjct: 119 GTAVCVTGAGGFVASWLVQRLLAGG 193
Score = 46.9 bits (96), Expect(2) = 8e-009
Identities = 25/48 (52%), Positives = 29/48 (60%)
Frame = -1 / -1
Query: 422 GDRGGGVEDAVTAGEGLGKALWVQQVGAEEDETVDGAVKGPQVVVLWI 279
GD G VEDAV AG+G A VQQVG E+ + GAV QV VL +
Sbjct: 487 GDWGRDVEDAVAAGDGRRHAAVVQQVGPEQAQPGRGAVHRRQVRVLGV 344
Score = 38.2 bits (77), Expect(2) = 8e-009
Identities = 16/25 (64%), Positives = 17/25 (68%)
Frame = -2 / -2
Query: 244 PFSRRRLTSQEAMNPPAPVTQTVRP 170
P +RRR TS EA PPAPVT T P
Sbjct: 192 PPARRRWTSHEATKPPAPVTHTAVP 118
Score = 35.4 bits (71), Expect(2) = 7e-004
Identities = 13/19 (68%), Positives = 15/19 (78%)
Frame = -2 / -2
Query: 418 TGEAAWKTPSQPEKASARL 362
TG+A WKTPSQP A+A L
Sbjct: 483 TGDATWKTPSQPATAAATL 427
Score = 32.7 bits (65), Expect(2) = 7e-004
Identities = 12/19 (63%), Positives = 16/19 (84%)
Frame = -1 / -1
Query: 236 QEALDEPGGNEPSSSGHAN 180
+EALDEP G+E S +GHA+
Sbjct: 184 EEALDEPRGHEASRAGHAH 128
>gb|CW266537.1|CW266537 104_736_11232481_116_35281_009 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11232481, DNA
sequence
Length = 589
Score = 60.6 bits (126), Expect(3) = 3e-013
Identities = 23/32 (71%), Positives = 26/32 (81%)
Frame = +3 / +2
Query: 180 VCVTGAGGFIASWLVKRLLEKGYTVRGTVRNP 275
VCVTG GGFIASWLVK LL +GY V T+R+P
Sbjct: 257 VCVTGGGGFIASWLVKLLLSRGYAVHATLRDP 352
Score = 41.8 bits (85), Expect(2) = 3e-006
Identities = 20/36 (55%), Positives = 20/36 (55%)
Frame = -2 / -2
Query: 274 GFLTVPRTV*PFSRRRLTSQEAMNPPAPVTQTVRPC 167
G V T *P R TSQEAMNPP PVT T C
Sbjct: 351 GSRRVAWTA*PRERSSFTSQEAMNPPPPVTHTRGSC 244
Score = 31.3 bits (62), Expect(2) = 3e-006
Identities = 15/47 (31%), Positives = 17/47 (36%)
Frame = -2 / -1
Query: 418 TGEAAWKTPSQPEKASARLCGXXXXXXXXXXXXXXXXXXXRWSFFGS 278
TG WKTP P A R+ RW+FFGS
Sbjct: 583 TGVQRWKTP*HP*TAGVRVSQSSTSALNRCRFSGALSSFFRWAFFGS 443
Score = 29.9 bits (59), Expect(3) = 3e-013
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = +3 / +3
Query: 360 QSLAEAFSGCDGVFHAASPV 419
++L A GC GVFH +PV
Sbjct: 525 ETLTPAVQGCQGVFHLCTPV 584
Score = 23.5 bits (45), Expect(3) = 3e-013
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = +3 / +3
Query: 279 DPKNDHLRALD 311
DPKN HL+ LD
Sbjct: 444 DPKNAHLKKLD 476
>gb|CW340854.1|CW340854 104_842_11486016_116_36172_096 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11486016, DNA
sequence
Length = 617
Score = 62.5 bits (130), Expect(3) = 3e-013
Identities = 24/34 (70%), Positives = 27/34 (79%)
Frame = +3 / -1
Query: 174 RTVCVTGAGGFIASWLVKRLLEKGYTVRGTVRNP 275
R VCVTG GGFIASWLVK LL +GY V T+R+P
Sbjct: 614 RRVCVTGGGGFIASWLVKLLLSRGYAVHATLRDP 513
Score = 46.0 bits (94), Expect = 0.001
Identities = 22/34 (64%), Positives = 22/34 (64%)
Frame = -2 / +1
Query: 274 GFLTVPRTV*PFSRRRLTSQEAMNPPAPVTQTVR 173
G V T *P RR LTSQEAMNPP PVT T R
Sbjct: 514 GSRRVAWTA*PRERRSLTSQEAMNPPPPVTHTRR 615
Score = 45.1 bits (92), Expect = 0.003
Identities = 18/25 (72%), Positives = 21/25 (84%)
Frame = -1 / +3
Query: 254 DCVALLQEALDEPGGNEPSSSGHAN 180
D VA +E LDEPGGNEPS+SGHA+
Sbjct: 534 DGVAAGEEELDEPGGNEPSASGHAH 608
Score = 42.8 bits (87), Expect = 0.014
Identities = 17/25 (68%), Positives = 17/25 (68%)
Frame = +2 / -3
Query: 200 RVHCLLARQAPPGEGLHSPRHGQEP 274
RVHCLLARQAPP L PRH P
Sbjct: 588 RVHCLLARQAPPLPRLRRPRHPSRP 514
Score = 38.6 bits (78), Expect = 0.24
Identities = 18/24 (75%), Positives = 19/24 (79%)
Frame = +1 / -2
Query: 184 A*PELEGSLPPGSSSASWRRATQS 255
A*PE EGSLPPGSSS+S AT S
Sbjct: 604 A*PEAEGSLPPGSSSSSSPAATPS 533
Score = 34.5 bits (69), Expect(3) = 3e-013
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = +3 / -1
Query: 363 SLAEAFSGCDGVFHAASPVTDD 428
+L A GC+G+FH A+PV +D
Sbjct: 200 TLTPAVEGCEGIFHLATPVPED 135
Score = 21.7 bits (41), Expect(3) = 3e-013
Identities = 7/11 (63%), Positives = 9/11 (81%)
Frame = +3 / -1
Query: 279 DPKNDHLRALD 311
DPKN HL+ L+
Sbjct: 284 DPKNAHLKELE 252
>gb|CW340855.1|CW340855 104_842_11486016_148_36171_096 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11486016, DNA
sequence
Length = 643
Score = 62.5 bits (130), Expect(3) = 4e-013
Identities = 24/34 (70%), Positives = 27/34 (79%)
Frame = +3 / +2
Query: 174 RTVCVTGAGGFIASWLVKRLLEKGYTVRGTVRNP 275
R VCVTG GGFIASWLVK LL +GY V T+R+P
Sbjct: 5 RRVCVTGGGGFIASWLVKLLLSRGYAVHATLRDP 106
Score = 46.0 bits (94), Expect = 0.001
Identities = 22/34 (64%), Positives = 22/34 (64%)
Frame = -2 / -2
Query: 274 GFLTVPRTV*PFSRRRLTSQEAMNPPAPVTQTVR 173
G V T *P RR LTSQEAMNPP PVT T R
Sbjct: 105 GSRRVAWTA*PRERRSLTSQEAMNPPPPVTHTRR 4
Score = 45.1 bits (92), Expect = 0.003
Identities = 18/25 (72%), Positives = 21/25 (84%)
Frame = -1 / -1
Query: 254 DCVALLQEALDEPGGNEPSSSGHAN 180
D VA +E LDEPGGNEPS+SGHA+
Sbjct: 85 DGVAAGEEELDEPGGNEPSASGHAH 11
Score = 42.8 bits (87), Expect = 0.014
Identities = 17/25 (68%), Positives = 17/25 (68%)
Frame = +2 / +1
Query: 200 RVHCLLARQAPPGEGLHSPRHGQEP 274
RVHCLLARQAPP L PRH P
Sbjct: 31 RVHCLLARQAPPLPRLRRPRHPSRP 105
Score = 38.6 bits (78), Expect = 0.24
Identities = 18/24 (75%), Positives = 19/24 (79%)
Frame = +1 / +3
Query: 184 A*PELEGSLPPGSSSASWRRATQS 255
A*PE EGSLPPGSSS+S AT S
Sbjct: 15 A*PEAEGSLPPGSSSSSSPAATPS 86
Score = 34.5 bits (69), Expect(3) = 4e-013
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = +3 / +2
Query: 363 SLAEAFSGCDGVFHAASPVTDD 428
+L A GC+G+FH A+PV +D
Sbjct: 419 TLTPAVEGCEGIFHLATPVPED 484
Score = 21.7 bits (41), Expect(3) = 4e-013
Identities = 7/11 (63%), Positives = 9/11 (81%)
Frame = +3 / +2
Query: 279 DPKNDHLRALD 311
DPKN HL+ L+
Sbjct: 335 DPKNAHLKELE 367
>gb|CW498402.1|CW498402 fsbb001f291j19k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f291j19, DNA
sequence
Length = 649
Score = 66.1 bits (138), Expect(2) = 4e-013
Identities = 26/32 (81%), Positives = 28/32 (87%)
Frame = +3 / -2
Query: 180 VCVTGAGGFIASWLVKRLLEKGYTVRGTVRNP 275
VCVTGA GFIASWL+KRLLE GY V GTVR+P
Sbjct: 531 VCVTGASGFIASWLIKRLLESGYHVLGTVRDP 436
Score = 51.9 bits (107), Expect(2) = 1e-008
Identities = 24/33 (72%), Positives = 25/33 (75%)
Frame = -2 / +2
Query: 274 GFLTVPRTV*PFSRRRLTSQEAMNPPAPVTQTV 176
G LTVPRT P SR RL SQEAM P APVTQT+
Sbjct: 437 GSLTVPRTWYPDSRSRLMSQEAMKPDAPVTQTL 535
Score = 33.6 bits (67), Expect(2) = 4e-013
Identities = 16/45 (35%), Positives = 19/45 (42%)
Frame = +3 / -2
Query: 285 KNDHLRALDGXXXXXXXXXXXXXXPQSLAEAFSGCDGVFHAASPV 419
K HL L+G S +A C+GVFH ASPV
Sbjct: 291 KVGHLWVLEGAKERLQLVRADLLEEGSFDDAVMACEGVFHTASPV 157
Score = 32.7 bits (65), Expect(2) = 1e-008
Identities = 12/20 (60%), Positives = 16/20 (80%)
Frame = -2 / +2
Query: 421 VTGEAAWKTPSQPEKASARL 362
+TG+A WKTPSQ AS++L
Sbjct: 155 MTGDAVWKTPSQAITASSKL 214
Score = 30.4 bits (60), Expect(2) = 0.22
Identities = 15/47 (31%), Positives = 28/47 (59%)
Frame = -1 / +1
Query: 434 LRVIGDRGGGVEDAVTAGEGLGKALWVQQVGAEEDETVDGAVKGPQV 294
+R DR VEDA+T+ + KA ++Q+V + + + + A + P+V
Sbjct: 142 IRFSDDRRCSVEDALTSHHSVVKAPFLQEVSSHKLQPLLCAFQNPEV 282
Score = 29.0 bits (57), Expect(2) = 0.22
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = -1 / +1
Query: 272 VPDRAADCVALLQEALDEPGGNE 204
V D + D V L++ LDEPGG+E
Sbjct: 439 VSDCSEDMVPRLKKPLDEPGGDE 507
>gb|BI245710.1|BI245710 IP1_63_C04.b1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 510
Score = 48.3 bits (99), Expect(4) = 5e-013
Identities = 19/33 (57%), Positives = 25/33 (75%)
Frame = +3 / +3
Query: 183 CVTGAGGFIASWLVKRLLEKGYTVRGTVRNPVD 281
CVTG GFIA+ L++ LL G++VR TVR+P D
Sbjct: 45 CVTGGTGFIAAHLIRALLAAGHSVRATVRDPED 143
Score = 34.5 bits (69), Expect(3) = 5e-005
Identities = 13/19 (68%), Positives = 15/19 (78%)
Frame = -2 / -3
Query: 418 TGEAAWKTPSQPEKASARL 362
TGEA WKTPS P AS++L
Sbjct: 283 TGEAVWKTPSTPLTASSKL 227
Score = 32.7 bits (65), Expect(4) = 5e-013
Identities = 13/19 (68%), Positives = 14/19 (73%)
Frame = +3 / +3
Query: 363 SLAEAFSGCDGVFHAASPV 419
S +A SG DGVFH ASPV
Sbjct: 228 SFDDAVSGVDGVFHTASPV 284
Score = 27.6 bits (54), Expect(3) = 5e-005
Identities = 15/33 (45%), Positives = 17/33 (51%)
Frame = -2 / -3
Query: 280 STGFLTVPRTV*PFSRRRLTSQEAMNPPAPVTQ 182
S+G LTV RT P + AM P PVTQ
Sbjct: 142 SSGSLTVARTEWPAASSARMRCAAMKPVPPVTQ 44
Score = 24.9 bits (48), Expect(4) = 5e-013
Identities = 12/20 (60%), Positives = 13/20 (65%)
Frame = +3 / +3
Query: 477 AAADDAGVKRVVFTSSIGTV 536
AAA D +RVVFTSS V
Sbjct: 378 AAAPDERPRRVVFTSSCSCV 437
Score = 24.0 bits (46), Expect(4) = 5e-013
Identities = 6/14 (42%), Positives = 12/14 (85%)
Frame = +3 / +3
Query: 570 VDDTCWSDLEYCKN 611
++++ WSD +YCK+
Sbjct: 459 LNESHWSDADYCKS 500
Score = 23.1 bits (44), Expect(3) = 5e-005
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = -2 / -3
Query: 535 TVPMEDVNTTRFTPASSAAA 476
T E+VNTTR +S AAA
Sbjct: 436 TQEQEEVNTTRRGRSSGAAA 377
>gb|CW181597.1|CW181597 104_596_11163596_148_36653_070 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11163596, DNA
sequence
Length = 722
Score = 53.8 bits (111), Expect(2) = 6e-013
Identities = 21/54 (38%), Positives = 33/54 (61%)
Frame = +3 / -3
Query: 447 PAIRGTRYVMAAADDAGVKRVVFTSSIGTVYMNPYRDPSKPVDDTCWSDLEYCK 608
PA+ GTR V+ A +A V+RVV SS+ + +NP +D+ WSD ++C+
Sbjct: 690 PAVDGTRNVLRACHEANVRRVVVVSSVAAIAVNPNCRNGVVLDEEWWSDEDFCR 529
Score = 45.5 bits (93), Expect(2) = 6e-013
Identities = 21/38 (55%), Positives = 23/38 (60%)
Frame = +3 / -3
Query: 780 GSATTYVNAAQAYVHVRDVAEAHVRVYEAPHAHGRYIC 893
G T + + V VRDVAEA V VYE P A GRYIC
Sbjct: 141 GDRDTVDDKMKNVVDVRDVAEALVLVYETPEASGRYIC 28
Score = 38.2 bits (77), Expect(2) = 0.029
Identities = 19/25 (76%), Positives = 19/25 (76%)
Frame = -2 / +2
Query: 892 QM*RPCAWGASYTRTCASATSLTCT 818
QM*RP A G SYTRT ASATS T T
Sbjct: 29 QM*RPEASGVSYTRTRASATSRTST 103
Score = 24.4 bits (47), Expect(2) = 0.029
Identities = 19/50 (38%), Positives = 22/50 (44%)
Frame = -2 / +2
Query: 607 LQYSRSLQQVSSTGLLGSR*GFMYTVPMEDVNTTRFTPASSAAAIT*RVP 458
LQ S S SS + GF ++ TTR T AS A T RVP
Sbjct: 530 LQKSSSDHHSSSRTTPLRQLGFTAMAATDETTTTRRTLASWQALSTLRVP 679
>gb|CF482272.1|CF482272 POL1_6_A05.b1_A002 Pollen Sorghum bicolor cDNA clone
POL1_6_A05_A002 3', mRNA sequence
Length = 562
Score = 74.4 bits (156), Expect = 4e-012
Identities = 27/69 (39%), Positives = 44/69 (63%)
Frame = +3 / +2
Query: 774 LTGSATTYVNAAQAYVHVRDVAEAHVRVYEAPHAHGRYICAESTLHRGDLCRVLAKLFPE 953
L ++TY N++ +V+V+DVA AH+ YE P A+GRY E +H +L +++ K++P
Sbjct: 29 LINGSSTYPNSSFGWVNVKDVALAHILAYEIPSANGRYCMVERVVHYSELVKIIRKMYPT 208
Query: 954 YPVPTKCKD 980
+P KC D
Sbjct: 209 IRLPDKCAD 235
>gb|CW319030.1|CW319030 104_811_11474269_116_35878_055 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11474269, DNA
sequence
Length = 702
Score = 40.5 bits (82), Expect(4) = 4e-012
Identities = 14/23 (60%), Positives = 18/23 (78%)
Frame = +3 / +3
Query: 615 QNWYCYAKTVAEQGAWEVARKRG 683
Q WY YAKTVAE+ AW +A++ G
Sbjct: 144 QLWYAYAKTVAEKEAWRLAKEHG 212
Score = 39.6 bits (80), Expect(4) = 4e-012
Identities = 16/45 (35%), Positives = 23/45 (51%)
Frame = +3 / +1
Query: 762 VMKYLTGSATTYVNAAQAYVHVRDVAEAHVRVYEAPHAHGRYICA 896
+++++ G Y N +VHV DV HV E A GR IC+
Sbjct: 415 LLEHIAGELGKYPNTTIGFVHVDDVVLCHVLAMEDARASGRLICS 549
Score = 29.9 bits (59), Expect(4) = 4e-012
Identities = 10/44 (22%), Positives = 21/44 (47%)
Frame = +3 / +1
Query: 909 HRGDLCRVLAKLFPEYPVPTKCKDQVNPPVVGYKFTNQRLKDLG 1040
H ++ L + +P+YP+P +C ++ ++K LG
Sbjct: 565 HWSEILESLRERYPQYPIPRECSSSQKGDDRPHRMDTSKVKALG 696
Score = 23.1 bits (44), Expect(4) = 4e-012
Identities = 6/9 (66%), Positives = 8/9 (88%)
Frame = +3 / +1
Query: 585 WSDLEYCKN 611
WSD +YCK+
Sbjct: 10 WSDADYCKS 36
>gb|CW185361.1|CW185361 104_603_11166021_148_36698_095 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11166021, DNA
sequence
Length = 422
Score = 60.6 bits (126), Expect(2) = 5e-012
Identities = 27/59 (45%), Positives = 34/59 (57%)
Frame = +3 / +2
Query: 438 MIEPAIRGTRYVMAAADDAGVKRVVFTSSIGTVYMNPYRDPSKPVDDTCWSDLEYCKNT 614
++ AI GT+ + AA V+ VV+T S G MNP R P V D+CWSDLE C T
Sbjct: 32 LMAAAIEGTKNAIYAAAHMEVQLVVYT*SYGAARMNPKRSPDDVVHDSCWSDLELCLMT 208
Score = 36.3 bits (73), Expect = 1.2
Identities = 23/52 (44%), Positives = 28/52 (53%)
Frame = -2 / -3
Query: 613 VFLQYSRSLQQVSSTGLLGSR*GFMYTVPMEDVNTTRFTPASSAAAIT*RVP 458
V Q SRSLQQ+S T G R GF+ P + V TT T +AA + VP
Sbjct: 207 VIRQSSRSLQQLSCTTSSGLRFGFIRAAP*D*VYTTSCTSICAAA*MAFFVP 52
Score = 34.5 bits (69), Expect(2) = 5e-012
Identities = 13/23 (56%), Positives = 18/23 (78%)
Frame = +3 / +1
Query: 615 QNWYCYAKTVAEQGAWEVARKRG 683
Q++YC++KTVAE+ A E A RG
Sbjct: 352 QSFYCFSKTVAEKTAMEEASNRG 420
>gb|CW311014.1|CW311014 104_800_11470012_148_36244_010 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11470012, DNA
sequence
Length = 776
Score = 52.8 bits (109), Expect(3) = 6e-012
Identities = 21/34 (61%), Positives = 25/34 (73%)
Frame = +3 / -3
Query: 174 RTVCVTGAGGFIASWLVKRLLEKGYTVRGTVRNP 275
+T CVT G+IAS L+K LLE GY V+ TVRNP
Sbjct: 765 KTACVTEGNGYIASVLIKMLLENGYAVKTTVRNP 664
Score = 35.4 bits (71), Expect(3) = 4e-005
Identities = 19/33 (57%), Positives = 19/33 (57%)
Frame = -2 / +2
Query: 274 GFLTVPRTV*PFSRRRLTSQEAMNPPAPVTQTV 176
GFLTV T *PFS L S EAM P VT V
Sbjct: 665 GFLTVVFTA*PFSSSILMSTEAMYPLPSVTHAV 763
Score = 35.4 bits (71), Expect(3) = 6e-012
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +3 / -2
Query: 498 VKRVVFTSSIGTVYMNPYRDPSKPVDDTCWSDLEY 602
VKRV+ TSS V P + +D+ W+D+EY
Sbjct: 220 VKRVILTSSAAAVAGRPLQGGGHVLDEESWTDVEY 116
Score = 35.0 bits (70), Expect = 3.0
Identities = 15/30 (50%), Positives = 20/30 (66%)
Frame = -1 / +1
Query: 272 VPDRAADCVALLQEALDEPGGNEPSSSGHA 183
VPDR VA+L++ LDE G+ P + GHA
Sbjct: 667 VPDRRLHGVAILEQHLDEHRGDVPVTLGHA 756
Score = 33.6 bits (67), Expect(3) = 4e-005
Identities = 17/39 (43%), Positives = 23/39 (58%)
Frame = -1 / +1
Query: 434 LRVIGDRGGGVEDAVTAGEGLGKALWVQQVGAEEDETVD 318
LR+ R G E V AG+GL +A + QVGAE+ + D
Sbjct: 391 LRMEVHRSGDEEGVVAAGDGLVEAAFF*QVGAEDCQGAD 507
Score = 26.7 bits (52), Expect(3) = 6e-012
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +3 / -2
Query: 438 MIEPAIRGTRYVMAAADDAGVKRVVFTSS 524
+IEPA+RG VM + AG + V +S
Sbjct: 283 LIEPAVRGILNVMRSCAKAGTVKRVILTS 197
Score = 22.1 bits (42), Expect(3) = 4e-005
Identities = 11/26 (42%), Positives = 13/26 (50%)
Frame = -1 / +2
Query: 1142 VGHGLVLSEARAACLSPGGW*PSRRG 1065
VG GL++ AA P G RRG
Sbjct: 125 VGPGLLVQNVAAALQRPAGDCSRRRG 202
>gb|BH245547.1|BH245547 pSB0878 S. bicolor BTx623 PstI-digested total genomic DNA library
Sorghum bicolor genomic clone pSB0878 similar to
putative cinnamoyl-CoA reductase (AAC78522), DNA
sequence
Length = 893
Score = 67.5 bits (141), Expect(2) = 6e-012
Identities = 28/75 (37%), Positives = 40/75 (53%)
Frame = +3 / -3
Query: 762 VMKYLTGSATTYVNAAQAYVHVRDVAEAHVRVYEAPHAHGRYICAESTLHRGDLCRVLAK 941
++ L G Y + VHV DVA AH+ V+E P A GR++C +S H D +A+
Sbjct: 312 LLSALAGCTEEYADFFIGPVHVEDVAMAHIMVFENPSASGRHMCVQSICHWSDFAVKVAE 133
Query: 942 LFPEYPVPTKCKDQV 986
L+P Y VP K +
Sbjct: 132 LYPNYKVPKYAKPHI 88
Score = 28.6 bits (56), Expect(2) = 6e-012
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = +3 / -1
Query: 621 WYCYAKTVAEQGAWEVARKRG 683
WY +K +AE+ AW+ A + G
Sbjct: 815 WYPASKALAEKAAWKFAEENG 753
>gb|CF428323.1|CF428323 PH1_14_C04.b1_A002 Phosphorous-deficient seedlings Sorghum bicolor
cDNA clone PH1_14_C04_A002 3', mRNA sequence
Length = 654
Score = 59.7 bits (124), Expect(2) = 7e-012
Identities = 28/73 (38%), Positives = 40/73 (54%)
Frame = +3 / +2
Query: 744 NASTDHVMKYLTGSATTYVNAAQAYVHVRDVAEAHVRVYEAPHAHGRYICAESTLHRGDL 923
NAS +++ L G + V VRDVA + + +YE P A GR++C ES DL
Sbjct: 131 NASLRLLLQILGGERIDLDDIYMGCVDVRDVAHSLIMLYENPSAQGRHLCMESAERLVDL 310
Query: 924 CRVLAKLFPEYPV 962
+A L+PE+PV
Sbjct: 311 ANKIADLYPEHPV 349
Score = 32.7 bits (65), Expect(2) = 7e-012
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +3 / +2
Query: 615 QNWYCYAKTVAEQGAWEVARK 677
Q WY +KT+AE+ AW+ A K
Sbjct: 2 QLWYSVSKTLAEKAAWDFAEK 64
>gb|BZ331520.1|BZ331520 hw10a10.g1 WGS-SbicolorF (JM107 adapted methyl filtered) Sorghum
bicolor genomic clone hw10a10 5', DNA sequence
Length = 635
Score = 73.5 bits (154), Expect = 8e-012
Identities = 30/76 (39%), Positives = 39/76 (51%)
Frame = +3 / -3
Query: 798 VNAAQAYVHVRDVAEAHVRVYEAPHAHGRYICAESTLHRGDLCRVLAKLFPEYPVPTKCK 977
V YVH+ DVA H+ YE+ AHGRYIC + L GDL +LA+ FP YP+P
Sbjct: 510 VYGRMGYVHIDDVARCHILAYESAGAHGRYICNAAVLCCGDLVALLARRFPAYPIPRSLP 331
Query: 978 DQVNPPVVGYKFTNQR 1025
G+ + R
Sbjct: 330 SVYGEQTYGFDTSKAR 283
Score = 39.1 bits (79), Expect = 0.17
Identities = 22/58 (37%), Positives = 27/58 (46%)
Frame = -2 / +2
Query: 970 LVGTGYSGKSLARTRQRSPRCRVLSAQM*RPCAWGASYTRTCASATSLTCTYACAAFT 797
L+G GY+G A RSP+ + QM P A SY R ATS TY +T
Sbjct: 338 LLGIGYAGNRRASRATRSPQHSTAALQMYLPWAPADSYARMWHLATSSMWTYPILPYT 511
>gb|CL160198.1|CL160198 104_350_10804807_114_31822_247 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10804807, DNA
sequence
Length = 588
Score = 73.5 bits (154), Expect = 8e-012
Identities = 30/76 (39%), Positives = 39/76 (51%)
Frame = +3 / -2
Query: 798 VNAAQAYVHVRDVAEAHVRVYEAPHAHGRYICAESTLHRGDLCRVLAKLFPEYPVPTKCK 977
V YVH+ DVA H+ YE+ AHGRYIC + L GDL +LA+ FP YP+P
Sbjct: 347 VYGRMGYVHIDDVARCHILAYESAGAHGRYICNAAVLCCGDLVALLARRFPAYPIPRSLP 168
Query: 978 DQVNPPVVGYKFTNQR 1025
G+ + R
Sbjct: 167 SVYGEQTYGFDTSKAR 120
Score = 39.1 bits (79), Expect = 0.17
Identities = 22/58 (37%), Positives = 27/58 (46%)
Frame = -2 / +1
Query: 970 LVGTGYSGKSLARTRQRSPRCRVLSAQM*RPCAWGASYTRTCASATSLTCTYACAAFT 797
L+G GY+G A RSP+ + QM P A SY R ATS TY +T
Sbjct: 175 LLGIGYAGNRRASRATRSPQHSTAALQMYLPWAPADSYARMWHLATSSMWTYPILPYT 348
>gb|CW072227.1|CW072227 104_325_10592141_114_30537 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10592141, DNA
sequence
Length = 604
Score = 73.5 bits (154), Expect = 8e-012
Identities = 30/76 (39%), Positives = 39/76 (51%)
Frame = +3 / +3
Query: 798 VNAAQAYVHVRDVAEAHVRVYEAPHAHGRYICAESTLHRGDLCRVLAKLFPEYPVPTKCK 977
V YVH+ DVA H+ YE+ AHGRYIC + L GDL +LA+ FP YP+P
Sbjct: 168 VYGRMGYVHIDDVARCHILAYESAGAHGRYICNAAVLCCGDLVALLARRFPAYPIPRSLP 347
Query: 978 DQVNPPVVGYKFTNQR 1025
G+ + R
Sbjct: 348 SVYGEQTYGFDTSKAR 395
Score = 39.1 bits (79), Expect = 0.17
Identities = 22/58 (37%), Positives = 27/58 (46%)
Frame = -2 / -1
Query: 970 LVGTGYSGKSLARTRQRSPRCRVLSAQM*RPCAWGASYTRTCASATSLTCTYACAAFT 797
L+G GY+G A RSP+ + QM P A SY R ATS TY +T
Sbjct: 340 LLGIGYAGNRRASRATRSPQHSTAALQMYLPWAPADSYARMWHLATSSMWTYPILPYT 167
>gb|CW128866.1|CW128866 104_510_11114251_116_34758_070 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11114251, DNA
sequence
Length = 563
Score = 73.5 bits (154), Expect = 8e-012
Identities = 30/76 (39%), Positives = 39/76 (51%)
Frame = +3 / +1
Query: 798 VNAAQAYVHVRDVAEAHVRVYEAPHAHGRYICAESTLHRGDLCRVLAKLFPEYPVPTKCK 977
V YVH+ DVA H+ YE+ AHGRYIC + L GDL +LA+ FP YP+P
Sbjct: 253 VYGRMGYVHIDDVARCHILAYESAGAHGRYICNAAVLCCGDLVALLARRFPAYPIPRSLP 432
Query: 978 DQVNPPVVGYKFTNQR 1025
G+ + R
Sbjct: 433 SVYGEQTYGFDTSKAR 480
Score = 39.1 bits (79), Expect = 0.17
Identities = 22/58 (37%), Positives = 27/58 (46%)
Frame = -2 / -1
Query: 970 LVGTGYSGKSLARTRQRSPRCRVLSAQM*RPCAWGASYTRTCASATSLTCTYACAAFT 797
L+G GY+G A RSP+ + QM P A SY R ATS TY +T
Sbjct: 425 LLGIGYAGNRRASRATRSPQHSTAALQMYLPWAPADSYARMWHLATSSMWTYPILPYT 252
>gb|CW146117.1|CW146117 104_538_11138820_116_34979_034 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11138820, DNA
sequence
Length = 611
Score = 73.5 bits (154), Expect = 8e-012
Identities = 30/76 (39%), Positives = 39/76 (51%)
Frame = +3 / -1
Query: 798 VNAAQAYVHVRDVAEAHVRVYEAPHAHGRYICAESTLHRGDLCRVLAKLFPEYPVPTKCK 977
V YVH+ DVA H+ YE+ AHGRYIC + L GDL +LA+ FP YP+P
Sbjct: 455 VYGRMGYVHIDDVARCHILAYESAGAHGRYICNAAVLCCGDLVALLARRFPAYPIPRSLP 276
Query: 978 DQVNPPVVGYKFTNQR 1025
G+ + R
Sbjct: 275 SVYGEQTYGFDTSKAR 228
Score = 39.1 bits (79), Expect = 0.17
Identities = 22/58 (37%), Positives = 27/58 (46%)
Frame = -2 / +1
Query: 970 LVGTGYSGKSLARTRQRSPRCRVLSAQM*RPCAWGASYTRTCASATSLTCTYACAAFT 797
L+G GY+G A RSP+ + QM P A SY R ATS TY +T
Sbjct: 283 LLGIGYAGNRRASRATRSPQHSTAALQMYLPWAPADSYARMWHLATSSMWTYPILPYT 456
>gb|CW446801.1|CW446801 fsbb001f179k03f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f179k03, DNA
sequence
Length = 651
Score = 73.5 bits (154), Expect = 8e-012
Identities = 30/76 (39%), Positives = 39/76 (51%)
Frame = +3 / -2
Query: 798 VNAAQAYVHVRDVAEAHVRVYEAPHAHGRYICAESTLHRGDLCRVLAKLFPEYPVPTKCK 977
V YVH+ DVA H+ YE+ AHGRYIC + L GDL +LA+ FP YP+P
Sbjct: 476 VYGRMGYVHIDDVARCHILAYESAGAHGRYICNAAVLCCGDLVALLARRFPAYPIPRSLP 297
Query: 978 DQVNPPVVGYKFTNQR 1025
G+ + R
Sbjct: 296 SVYGEQTYGFDTSKAR 249
Score = 39.1 bits (79), Expect = 0.17
Identities = 22/58 (37%), Positives = 27/58 (46%)
Frame = -2 / +1
Query: 970 LVGTGYSGKSLARTRQRSPRCRVLSAQM*RPCAWGASYTRTCASATSLTCTYACAAFT 797
L+G GY+G A RSP+ + QM P A SY R ATS TY +T
Sbjct: 304 LLGIGYAGNRRASRATRSPQHSTAALQMYLPWAPADSYARMWHLATSSMWTYPILPYT 477
>gb|CW464925.1|CW464925 fsbb001f215g22f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f215g22, DNA
sequence
Length = 505
Score = 73.5 bits (154), Expect = 8e-012
Identities = 30/76 (39%), Positives = 39/76 (51%)
Frame = +3 / -2
Query: 798 VNAAQAYVHVRDVAEAHVRVYEAPHAHGRYICAESTLHRGDLCRVLAKLFPEYPVPTKCK 977
V YVH+ DVA H+ YE+ AHGRYIC + L GDL +LA+ FP YP+P
Sbjct: 483 VYGRMGYVHIDDVARCHILAYESAGAHGRYICNAAVLCCGDLVALLARRFPAYPIPRSLP 304
Query: 978 DQVNPPVVGYKFTNQR 1025
G+ + R
Sbjct: 303 SVYGEQTYGFDTSKAR 256
Score = 39.1 bits (79), Expect = 0.17
Identities = 22/58 (37%), Positives = 27/58 (46%)
Frame = -2 / +2
Query: 970 LVGTGYSGKSLARTRQRSPRCRVLSAQM*RPCAWGASYTRTCASATSLTCTYACAAFT 797
L+G GY+G A RSP+ + QM P A SY R ATS TY +T
Sbjct: 311 LLGIGYAGNRRASRATRSPQHSTAALQMYLPWAPADSYARMWHLATSSMWTYPILPYT 484
>gb|CF756413.1|CF756413 DSAF1_5_H08.b1_A011 Drought-stressed after flowering Sorghum
bicolor cDNA clone DSAF1_5_H08_A011 5', mRNA sequence
Length = 368
Score = 61.1 bits (127), Expect(2) = 9e-012
Identities = 25/69 (36%), Positives = 39/69 (56%)
Frame = +3 / +1
Query: 477 AAADDAGVKRVVFTSSIGTVYMNPYRDPSKPVDDTCWSDLEYCKNTQNWYCYAKTVAEQG 656
AA + V+RVV TSS + +P + D+ CW+D+ Y + WY +KT+AE+
Sbjct: 160 AAKEAGSVRRVVVTSSSCAIMPSPGWPAGEVRDERCWTDIYYSEKNGVWYPVSKTLAEKA 339
Query: 657 AWEVARKRG 683
AW+ A + G
Sbjct: 340 AWKFAEENG 366
Score = 30.9 bits (61), Expect(2) = 9e-012
Identities = 12/22 (54%), Positives = 14/22 (63%)
Frame = +3 / +1
Query: 363 SLAEAFSGCDGVFHAASPVTDD 428
+L +A GC GVFH ASP D
Sbjct: 28 ALIDAARGCSGVFHLASPCIVD 93
>gb|CW065144.1|CW065144 104_311_10522975_114_30118 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10522975, DNA
sequence
Length = 570
Score = 56.5 bits (117), Expect(2) = 1e-011
Identities = 25/53 (47%), Positives = 29/53 (54%)
Frame = +3 / +1
Query: 261 TVRNPVDPKNDHLRALDGXXXXXXXXXXXXXXPQSLAEAFSGCDGVFHAASPV 419
T+ + DPKN HL ALDG S+A A +GCDGVFH ASPV
Sbjct: 145 TICDAGDPKNAHLMALDGAAERLRLFKADLLDRASVAAAVAGCDGVFHVASPV 303
Score = 40.9 bits (83), Expect = 0.048
Identities = 23/47 (48%), Positives = 27/47 (57%)
Frame = -1 / -1
Query: 419 DRGGGVEDAVTAGEGLGKALWVQQVGAEEDETVDGAVKGPQVVVLWI 279
D G VEDAV A G G A VQQ+G E + + AV+ QV VL I
Sbjct: 303 DGAGDVEDAVAASNGGGDAGTVQQIGLE*PQALRRAVQRHQVRVLGI 163
Score = 37.7 bits (76), Expect(2) = 1e-011
Identities = 15/37 (40%), Positives = 23/37 (62%)
Frame = +3 / +1
Query: 438 MIEPAIRGTRYVMAAADDAGVKRVVFTSSIGTVYMNP 548
++ PA+ GT+ V+ + A V+RVV SS+ V NP
Sbjct: 439 ILAPAVTGTQNVLEGSHAANVRRVVVVSSVAAVLANP 549
Score = 34.5 bits (69), Expect = 4.1
Identities = 17/47 (36%), Positives = 19/47 (40%)
Frame = -2 / -2
Query: 418 TGEAAWKTPSQPEKASARLCGXXXXXXXXXXXXXXXXXXXRWSFFGS 278
TG A WKTPSQP A+A L R +F GS
Sbjct: 302 TGLATWKTPSQPATAAATLARSSKSALNSRRRSAAPSSAIRCAFLGS 162
>gb|CW044897.1|CW044897 104_281_10509231_115_30234 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10509231, DNA
sequence
Length = 552
Score = 72.5 bits (152), Expect = 1e-011
Identities = 25/52 (48%), Positives = 36/52 (69%)
Frame = +3 / +1
Query: 816 YVHVRDVAEAHVRVYEAPHAHGRYICAESTLHRGDLCRVLAKLFPEYPVPTK 971
YVH+ DVA +H+ VYE PHA GRY+C+ L +L +LAK +P +P+P +
Sbjct: 166 YVHIDDVASSHILVYETPHATGRYLCSSVVLDNDELVSLLAKRYPVFPIPRR 321
>gb|BI211709.1|BI211709 IP1_60_H10.g1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 578
Score = 72.5 bits (152), Expect = 1e-011
Identities = 25/52 (48%), Positives = 36/52 (69%)
Frame = +3 / +2
Query: 816 YVHVRDVAEAHVRVYEAPHAHGRYICAESTLHRGDLCRVLAKLFPEYPVPTK 971
YVH+ DVA +H+ VYE PHA GRY+C+ L +L +LAK +P +P+P +
Sbjct: 44 YVHIDDVASSHILVYETPHATGRYLCSSVVLDNDELVSLLAKRYPVFPIPRR 199
>gb|CW216905.1|CW216905 104_649_11195370_116_37128_065 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11195370, DNA
sequence
Length = 644
Score = 59.7 bits (124), Expect(2) = 2e-011
Identities = 23/34 (67%), Positives = 27/34 (79%)
Frame = +3 / -3
Query: 171 GRTVCVTGAGGFIASWLVKRLLEKGYTVRGTVRN 272
G VCVTGA GFI SWLV+ LL++GYTV TV+N
Sbjct: 414 GLLVCVTGASGFIGSWLVRCLLDRGYTVHATVKN 313
Score = 52.4 bits (108), Expect(2) = 4e-006
Identities = 25/34 (73%), Positives = 26/34 (76%)
Frame = -2 / +2
Query: 271 FLTVPRTV*PFSRRRLTSQEAMNPPAPVTQTVRP 170
FLTV TV*P SRR+ TSQE M P APVTQT RP
Sbjct: 314 FLTVAWTV*PRSRRQRTSQEPMKPLAPVTQTRRP 415
Score = 39.6 bits (80), Expect = 0.13
Identities = 16/25 (64%), Positives = 17/25 (68%)
Frame = +2 / -2
Query: 200 RVHCLLARQAPPGEGLHSPRHGQEP 274
R+H LLAR PP LH PRH QEP
Sbjct: 385 RLHWLLARPLPP*PRLHRPRHRQEP 311
Score = 35.9 bits (72), Expect = 1.6
Identities = 15/31 (48%), Positives = 20/31 (64%)
Frame = -1 / +1
Query: 272 VPDRAADCVALLQEALDEPGGNEPSSSGHAN 180
V D D VA ++EA DEPG NE + + HA+
Sbjct: 313 VLDGGVDGVAAVKEAADEPGANEAAGARHAD 405
Score = 34.5 bits (69), Expect(2) = 2e-011
Identities = 15/42 (35%), Positives = 19/42 (45%)
Frame = +3 / -1
Query: 294 HLRALDGXXXXXXXXXXXXXXPQSLAEAFSGCDGVFHAASPV 419
HL+A+ G P S+ A G GVFH ASP+
Sbjct: 170 HLQAMGGADARLRLFQMDLVDPASVQPAIEGAHGVFHLASPM 45
Score = 23.5 bits (45), Expect(2) = 4e-006
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = -2 / +1
Query: 421 VTGEAAWKTPSQPEKA 374
+ G+A WKTP P A
Sbjct: 43 IIGDARWKTPWAPSIA 90
>gb|CN127950.1|CN127950 RHOH1_26_C10.b1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_26_C10_A002 3', mRNA sequence
Length = 800
Score = 72.1 bits (151), Expect = 2e-011
Identities = 30/74 (40%), Positives = 41/74 (55%)
Frame = +3 / +1
Query: 744 NASTDHVMKYLTGSATTYVNAAQAYVHVRDVAEAHVRVYEAPHAHGRYICAESTLHRGDL 923
NAS+ ++ Y G T N + V VRDVA+A + YE P A GRYIC+ + D+
Sbjct: 76 NASSKILLNYFKGDRETIENRLRNIVDVRDVADALLLAYEKPEASGRYICSSQPIKVSDM 255
Query: 924 CRVLAKLFPEYPVP 965
+L L+P YP P
Sbjct: 256 INILKTLYPTYPYP 297
Score = 41.8 bits (85), Expect = 0.026
Identities = 23/54 (42%), Positives = 30/54 (55%)
Frame = -2 / -1
Query: 892 QM*RPCAWGASYTRTCASATSLTCTYACAAFT*VVADPVRYFITWSVLAFTVGC 731
QM RP A G SY R ASATS T T + F+ V P++ + +LAF + C
Sbjct: 224 QMYRPDASGFSYARRRASATSRTSTIFLSLFSMVSRSPLK*LRSILLLAFNIDC 63
>gb|BM317843.1|BM317843 OV1_16_B11.b9_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA
sequence
Length = 568
Score = 41.4 bits (84), Expect(4) = 3e-011
Identities = 15/25 (60%), Positives = 19/25 (76%)
Frame = +3 / +1
Query: 207 IASWLVKRLLEKGYTVRGTVRNPVD 281
+ SWLV +LL GYTVR TVR+P +
Sbjct: 1 VGSWLVMKLLHAGYTVRATVRDPAN 75
Score = 30.4 bits (60), Expect(4) = 3e-011
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +3 / +1
Query: 471 VMAAADDAGVKRVVFTSSIGTVYMNPYRDP 560
+ A + V+R+VFTSS GTV + R P
Sbjct: 283 MQACKEAGTVRRIVFTSSAGTVNVEERRKP 372
Score = 29.5 bits (58), Expect(4) = 3e-011
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +3 / +1
Query: 363 SLAEAFSGCDGVFHAASPV 419
S +A GC GVFH A+P+
Sbjct: 160 SFDDAIRGCTGVFHVATPM 216
Score = 29.0 bits (57), Expect(2) = 0.78
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = -2 / -3
Query: 415 GEAAWKTPSQPEKASARL 362
G A WKTP QP AS++L
Sbjct: 212 GVATWKTPVQPLMASSKL 159
Score = 25.4 bits (49), Expect(2) = 0.78
Identities = 13/21 (61%), Positives = 14/21 (66%)
Frame = -2 / -3
Query: 274 GFLTVPRTV*PFSRRRLTSQE 212
G TV RTV*P R +TSQE
Sbjct: 68 GSRTVARTV*PAWRSFMTSQE 6
Score = 22.1 bits (42), Expect(4) = 3e-011
Identities = 4/15 (26%), Positives = 11/15 (73%)
Frame = +3 / +1
Query: 573 DDTCWSDLEYCKNTQ 617
D+ W+D+++C+ +
Sbjct: 379 DEDSWTDVDFCRRVK 423
>gb|BE357345.1|BE357345 DG1_148_D02.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 719
Score = 51.5 bits (106), Expect(2) = 4e-011
Identities = 26/71 (36%), Positives = 36/71 (50%)
Frame = +3 / +1
Query: 744 NASTDHVMKYLTGSATTYVNAAQAYVHVRDVAEAHVRVYEAPHAHGRYICAESTLHRGDL 923
N S + ++ + G T N V VRDVA+A + VYE + RYICA + + DL
Sbjct: 151 NVSHEFLLYIIKGGPTVMRNIPWHIVDVRDVADALLLVYEKEKSARRYICAPNYISAIDL 330
Query: 924 CRVLAKLFPEY 956
+L K P Y
Sbjct: 331 VNMLKKAHPNY 363
Score = 38.2 bits (77), Expect(2) = 4e-011
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +3 / +1
Query: 594 LEYCKNTQNWYCYAKTVAEQGAWEVARKRG 683
+ +CK ++WY AK +AE+ A E A K G
Sbjct: 1 INFCKMNEDWYMVAKVIAEKTALEYAEKNG 90
Score = 33.6 bits (67), Expect = 7.8
Identities = 21/54 (38%), Positives = 26/54 (48%)
Frame = -2 / -1
Query: 895 AQM*RPCAWGASYTRTCASATSLTCTYACAAFT*VVADPVRYFITWSVLAFTVG 734
AQM + SYTR+ ASATS T T F V P+ + S L T+G
Sbjct: 302 AQMYLLADFSFSYTRSKASATSRTSTMCQGMFLITVGPPLIMYSRNSWLTLTIG 141
>gb|CW098262.1|CW098262 104_464_11002911_116_34360_052 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11002911, DNA
sequence
Length = 612
Score = 52.4 bits (108), Expect(3) = 6e-011
Identities = 21/60 (35%), Positives = 33/60 (55%)
Frame = +3 / -2
Query: 438 MIEPAIRGTRYVMAAADDAGVKRVVFTSSIGTVYMNPYRDPSKPVDDTCWSDLEYCKNTQ 617
+++PA++GT V+ V +VV SS V NP + D++CWSD E+CK +
Sbjct: 248 VLDPAVKGT*NVLKVCSTLKVHKVVVMSSNAAVTSNPNWPQDRLKDESCWSDTEFCKEKE 69
Score = 35.0 bits (70), Expect(3) = 6e-011
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = +3 / -1
Query: 360 QSLAEAFSGCDGVFHAASPVTDD 428
++L A GC GVFH A+PV +D
Sbjct: 528 ETLTPAVQGCQGVFHLATPVPED 460
Score = 33.6 bits (67), Expect = 7.8
Identities = 16/47 (34%), Positives = 18/47 (38%)
Frame = -2 / +2
Query: 418 TGEAAWKTPSQPEKASARLCGXXXXXXXXXXXXXXXXXXXRWSFFGS 278
TG A WKTP P A R+ RW+FFGS
Sbjct: 470 TGVARWKTP*HP*TAGVRVSQSSTSALNRCRFSGALSSFFRWAFFGS 610
Score = 23.5 bits (45), Expect(3) = 6e-011
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = +3 / -1
Query: 279 DPKNDHLRALD 311
DPKN HL+ LD
Sbjct: 609 DPKNAHLKKLD 577
>gb|CW139361.1|CW139361 104_529_11135198_116_34905_055 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11135198, DNA
sequence
Length = 617
Score = 70.3 bits (147), Expect = 7e-011
Identities = 28/34 (82%), Positives = 30/34 (88%)
Frame = +3 / +1
Query: 171 GRTVCVTGAGGFIASWLVKRLLEKGYTVRGTVRN 272
G TVCVTGAGGFIASWLVK LL +GYTV GTVR+
Sbjct: 328 GTTVCVTGAGGFIASWLVKLLLSRGYTVHGTVRD 429
Score = 51.5 bits (106), Expect = 3e-005
Identities = 23/32 (71%), Positives = 23/32 (71%)
Frame = -2 / -1
Query: 265 TVPRTV*PFSRRRLTSQEAMNPPAPVTQTVRP 170
TVP TV*P R TS EAMNPPAPVT TV P
Sbjct: 422 TVPCTV*PRESRSFTSHEAMNPPAPVTHTVVP 327
>gb|CW168295.1|CW168295 104_577_11154068_116_36494_066 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11154068, DNA
sequence
Length = 649
Score = 70.3 bits (147), Expect = 7e-011
Identities = 28/34 (82%), Positives = 30/34 (88%)
Frame = +3 / +2
Query: 171 GRTVCVTGAGGFIASWLVKRLLEKGYTVRGTVRN 272
G TVCVTGAGGFIASWLVK LL +GYTV GTVR+
Sbjct: 425 GTTVCVTGAGGFIASWLVKLLLSRGYTVHGTVRD 526
Score = 51.5 bits (106), Expect = 3e-005
Identities = 23/32 (71%), Positives = 23/32 (71%)
Frame = -2 / -2
Query: 265 TVPRTV*PFSRRRLTSQEAMNPPAPVTQTVRP 170
TVP TV*P R TS EAMNPPAPVT TV P
Sbjct: 519 TVPCTV*PRESRSFTSHEAMNPPAPVTHTVVP 424
>gb|BG557592.1|BG557592 EM1_53_F09.g1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 607
Score = 70.3 bits (147), Expect = 7e-011
Identities = 32/79 (40%), Positives = 42/79 (53%)
Frame = +3 / +2
Query: 744 NASTDHVMKYLTGSATTYVNAAQAYVHVRDVAEAHVRVYEAPHAHGRYICAESTLHRGDL 923
NAS + L G Y + VHV DVA AH+ V+E P A GR++C +S H D
Sbjct: 98 NASMAMFCRLLQGCTEEYADFFIGPVHVEDVAMAHIMVFENPSASGRHMCVQSICHWSDF 277
Query: 924 CRVLAKLFPEYPVPTKCKD 980
+A+L+P Y VP KD
Sbjct: 278 AVKVAELYPNYKVPKFPKD 334
>gb|CW028789.1|CW028789 104_256_10499304_116_30400 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10499304, DNA
sequence
Length = 781
Score = 40.5 bits (82), Expect(4) = 8e-011
Identities = 14/23 (60%), Positives = 18/23 (78%)
Frame = +3 / -3
Query: 615 QNWYCYAKTVAEQGAWEVARKRG 683
Q WY YAKTVAE+ AW +A++ G
Sbjct: 467 QLWYAYAKTVAEKEAWRLAKEHG 399
Score = 39.6 bits (80), Expect(4) = 8e-011
Identities = 16/45 (35%), Positives = 23/45 (51%)
Frame = +3 / -1
Query: 762 VMKYLTGSATTYVNAAQAYVHVRDVAEAHVRVYEAPHAHGRYICA 896
+++++ G Y N +VHV DV HV E A GR IC+
Sbjct: 196 LLEHIAGELGKYPNTTIGFVHVDDVVLCHVLAMEDARASGRLICS 62
Score = 24.9 bits (48), Expect(4) = 8e-011
Identities = 12/20 (60%), Positives = 13/20 (65%)
Frame = +3 / -1
Query: 477 AAADDAGVKRVVFTSSIGTV 536
AAA D +RVVFTSS V
Sbjct: 697 AAAPDERPRRVVFTSSCSCV 638
Score = 24.0 bits (46), Expect(4) = 8e-011
Identities = 6/14 (42%), Positives = 12/14 (85%)
Frame = +3 / -1
Query: 570 VDDTCWSDLEYCKN 611
++++ WSD +YCK+
Sbjct: 616 LNESHWSDADYCKS 575
>gb|CF756497.1|CF756497 DSAF1_5_H08.g1_A011 Drought-stressed after flowering Sorghum
bicolor cDNA clone DSAF1_5_H08_A011 3', mRNA sequence
Length = 504
Score = 69.3 bits (145), Expect = 1e-010
Identities = 32/69 (46%), Positives = 38/69 (55%)
Frame = +3 / +2
Query: 780 GSATTYVNAAQAYVHVRDVAEAHVRVYEAPHAHGRYICAESTLHRGDLCRVLAKLFPEYP 959
G Y + VHV DVA AH+ V+E P A GR+ICAES H D LA+L+P Y
Sbjct: 5 GCTEEYKDIWMGAVHVEDVALAHLLVFENPSASGRHICAESINHLSDFAAKLAELYPSYK 184
Query: 960 VPTKCKDQV 986
VP QV
Sbjct: 185 VPNVALWQV 211
>gb|BG947892.1|BG947892 IP1_6_F06.b1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 454
Score = 40.9 bits (83), Expect(3) = 1e-010
Identities = 13/27 (48%), Positives = 19/27 (70%)
Frame = +3 / +3
Query: 558 PSKPVDDTCWSDLEYCKNTQNWYCYAK 638
P+ +D+T WS +EYC++ Q WY AK
Sbjct: 366 PNVLLDETSWSSIEYCESLQIWYAVAK 446
Score = 34.1 bits (68), Expect(3) = 1e-010
Identities = 14/22 (63%), Positives = 17/22 (77%)
Frame = +3 / +3
Query: 222 VKRLLEKGYTVRGTVRNPVDPK 287
+KRLLE GY V GTVR+P + K
Sbjct: 9 IKRLLESGYHVLGTVRDPGNHK 74
Score = 33.6 bits (67), Expect(3) = 1e-010
Identities = 16/45 (35%), Positives = 19/45 (42%)
Frame = +3 / +3
Query: 285 KNDHLRALDGXXXXXXXXXXXXXXPQSLAEAFSGCDGVFHAASPV 419
K HL L+G S +A C+GVFH ASPV
Sbjct: 75 KVGHLWVLEGAKERLQLVRADLLEEGSFDDAVMACEGVFHTASPV 209
Score = 32.7 bits (65), Expect(3) = 3e-005
Identities = 12/20 (60%), Positives = 16/20 (80%)
Frame = -2 / -1
Query: 421 VTGEAAWKTPSQPEKASARL 362
+TG+A WKTPSQ AS++L
Sbjct: 211 MTGDAVWKTPSQAITASSKL 152
Score = 32.2 bits (64), Expect(3) = 3e-005
Identities = 14/32 (43%), Positives = 16/32 (50%)
Frame = -2 / -1
Query: 646 ATVLA*QYQFWVFLQYSRSLQQVSSTGLLGSR 551
A + A Y W QYS L VSS+ LG R
Sbjct: 454 ARIFATAYHIWRLSQYSMELHDVSSSNTLGGR 359
Score = 24.9 bits (48), Expect(3) = 3e-005
Identities = 12/17 (70%), Positives = 12/17 (70%)
Frame = -2 / -1
Query: 274 GFLTVPRTV*PFSRRRL 224
G LTVPRT P SR RL
Sbjct: 61 GSLTVPRTWYPDSRSRL 11
>gb|CW421199.1|CW421199 fsbb001f128o12f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f128o12, DNA
sequence
Length = 749
Score = 61.1 bits (127), Expect(2) = 2e-010
Identities = 23/30 (76%), Positives = 25/30 (83%)
Frame = +3 / +1
Query: 969 KCKDQVNPPVVGYKFTNQRLKDLGMDFVPV 1058
+CKDQVNPP GYKFTNQ LKDLG+ F PV
Sbjct: 34 RCKDQVNPPKKGYKFTNQPLKDLGIKFTPV 123
Score = 40.0 bits (81), Expect = 0.091
Identities = 18/30 (60%), Positives = 18/30 (60%)
Frame = -2 / -1
Query: 1057 TGTKSIPRSLSLWLVNLYPTTGGLTWSLHL 968
TG IPRS W VNL P GG T SLHL
Sbjct: 122 TGVNLIPRSFRGWFVNL*PFFGGFT*SLHL 33
Score = 26.7 bits (52), Expect(2) = 2e-010
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = +2 / +1
Query: 1067 LYETVTSLQEKGML 1108
LYE V SLQEKG L
Sbjct: 133 LYEAVKSLQEKGFL 174
>gb|CW235079.1|CW235079 104_690_11214791_116_37407_092 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11214791, DNA
sequence
Length = 605
Score = 61.1 bits (127), Expect(2) = 2e-010
Identities = 23/30 (76%), Positives = 25/30 (83%)
Frame = +3 / +2
Query: 969 KCKDQVNPPVVGYKFTNQRLKDLGMDFVPV 1058
+CKDQVNPP GYKFTNQ LKDLG+ F PV
Sbjct: 83 RCKDQVNPPKKGYKFTNQPLKDLGIKFTPV 172
Score = 40.0 bits (81), Expect = 0.091
Identities = 18/30 (60%), Positives = 18/30 (60%)
Frame = -2 / -3
Query: 1057 TGTKSIPRSLSLWLVNLYPTTGGLTWSLHL 968
TG IPRS W VNL P GG T SLHL
Sbjct: 171 TGVNLIPRSFRGWFVNL*PFFGGFT*SLHL 82
Score = 26.7 bits (52), Expect(2) = 2e-010
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = +2 / +2
Query: 1067 LYETVTSLQEKGML 1108
LYE V SLQEKG L
Sbjct: 182 LYEAVKSLQEKGFL 223
>gb|CN147160.1|CN147160 WOUND1_48_B05.b1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_48_B05_A002 3', mRNA sequence
Length = 780
Score = 48.3 bits (99), Expect(2) = 2e-010
Identities = 21/48 (43%), Positives = 30/48 (62%)
Frame = +3 / +2
Query: 819 VHVRDVAEAHVRVYEAPHAHGRYICAESTLHRGDLCRVLAKLFPEYPV 962
V VRDVA++ + +YE A GR++C ES+ D LA L+PE+ V
Sbjct: 251 VDVRDVAQSLIVLYENTSAEGRHLCLESSERMVDFTNRLAHLYPEFSV 394
Score = 42.8 bits (87), Expect(2) = 2e-010
Identities = 19/42 (45%), Positives = 25/42 (59%)
Frame = +3 / +2
Query: 423 DDPEMMIEPAIRGTRYVMAAADDAGVKRVVFTSSIGTVYMNP 548
D ++EPA++GT V+ AA D GV RVV SS + NP
Sbjct: 14 DPENELVEPALKGTLSVLRAAKDCGVGRVVMVSSQTAMVPNP 139
>gb|BZ367896.1|BZ367896 id07b12.b1 WGS-SbicolorF (JM107 adapted methyl filtered) Sorghum
bicolor genomic clone id07b12 5', DNA sequence
Length = 668
Score = 68.9 bits (144), Expect = 2e-010
Identities = 26/36 (72%), Positives = 30/36 (83%)
Frame = +3 / +2
Query: 168 QGRTVCVTGAGGFIASWLVKRLLEKGYTVRGTVRNP 275
Q + VCVTGAGGFI SW+VK LL++GY VRGT RNP
Sbjct: 335 QQQLVCVTGAGGFIGSWVVKELLQRGYLVRGTARNP 442
Score = 45.5 bits (93), Expect(2) = 6e-005
Identities = 22/38 (57%), Positives = 23/38 (60%)
Frame = -2 / -3
Query: 280 STGFLTVPRTV*PFSRRRLTSQEAMNPPAPVTQTVRPC 167
S GFL VP T *P LT+ E M PPAPVTQT C
Sbjct: 447 SPGFLAVPLTR*PRWSSSLTTHEPMKPPAPVTQTSCCC 334
Score = 34.1 bits (68), Expect = 5.7
Identities = 14/32 (43%), Positives = 21/32 (65%)
Frame = -1 / -2
Query: 275 RVPDRAADCVALLQEALDEPGGNEPSSSGHAN 180
RVP + D VA L++ LD P +E + +GHA+
Sbjct: 442 RVPCSSPDKVAALEQLLDHPRTDEAAGAGHAD 347
Score = 26.3 bits (51), Expect(2) = 6e-005
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = -1 / -2
Query: 353 QQVGAEEDETVDGAVKGPQVVVL 285
+ VGA + ET+ GAV+ QV VL
Sbjct: 667 EDVGAAQGETLLGAVQSQQVRVL 599
>gb|CW025004.1|CW025004 104_226_10487914_116_30525 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10487914, DNA
sequence
Length = 607
Score = 68.9 bits (144), Expect = 2e-010
Identities = 30/62 (48%), Positives = 36/62 (58%)
Frame = +3 / -3
Query: 780 GSATTYVNAAQAYVHVRDVAEAHVRVYEAPHAHGRYICAESTLHRGDLCRVLAKLFPEYP 959
G Y + VHV DVA AH+ V+E P A GR+ICAES H D LA+L+P Y
Sbjct: 188 GCTEEYKDIWMGAVHVEDVALAHLLVFENPSASGRHICAESINHLSDFAAKLAELYPSYK 9
Query: 960 VP 965
VP
Sbjct: 8 VP 3
>gb|CW118200.1|CW118200 104_494_11108075_116_34682_038 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11108075, DNA
sequence
Length = 561
Score = 68.9 bits (144), Expect = 2e-010
Identities = 30/62 (48%), Positives = 36/62 (58%)
Frame = +3 / +2
Query: 780 GSATTYVNAAQAYVHVRDVAEAHVRVYEAPHAHGRYICAESTLHRGDLCRVLAKLFPEYP 959
G Y + VHV DVA AH+ V+E P A GR+ICAES H D LA+L+P Y
Sbjct: 359 GCTEEYKDIWMGAVHVEDVALAHLLVFENPSASGRHICAESINHLSDFAAKLAELYPSYK 538
Query: 960 VP 965
VP
Sbjct: 539 VP 544
>gb|CW118201.1|CW118201 104_494_11108075_148_34681_038 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11108075, DNA
sequence
Length = 671
Score = 68.9 bits (144), Expect = 2e-010
Identities = 30/62 (48%), Positives = 36/62 (58%)
Frame = +3 / -1
Query: 780 GSATTYVNAAQAYVHVRDVAEAHVRVYEAPHAHGRYICAESTLHRGDLCRVLAKLFPEYP 959
G Y + VHV DVA AH+ V+E P A GR+ICAES H D LA+L+P Y
Sbjct: 599 GCTEEYKDIWMGAVHVEDVALAHLLVFENPSASGRHICAESINHLSDFAAKLAELYPSYK 420
Query: 960 VP 965
VP
Sbjct: 419 VP 414
>gb|CW317381.1|CW317381 104_809_11473385_116_35861_077 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11473385, DNA
sequence
Length = 716
Score = 68.9 bits (144), Expect = 2e-010
Identities = 26/36 (72%), Positives = 30/36 (83%)
Frame = +3 / +1
Query: 168 QGRTVCVTGAGGFIASWLVKRLLEKGYTVRGTVRNP 275
Q + VCVTGAGGFI SW+VK LL++GY VRGT RNP
Sbjct: 469 QQQLVCVTGAGGFIGSWVVKELLQRGYLVRGTARNP 576
Score = 45.5 bits (93), Expect = 0.002
Identities = 22/38 (57%), Positives = 23/38 (60%)
Frame = -2 / -1
Query: 280 STGFLTVPRTV*PFSRRRLTSQEAMNPPAPVTQTVRPC 167
S GFL VP T *P LT+ E M PPAPVTQT C
Sbjct: 581 SPGFLAVPLTR*PRWSSSLTTHEPMKPPAPVTQTSCCC 468
Score = 34.1 bits (68), Expect = 5.7
Identities = 14/32 (43%), Positives = 21/32 (65%)
Frame = -1 / -3
Query: 275 RVPDRAADCVALLQEALDEPGGNEPSSSGHAN 180
RVP + D VA L++ LD P +E + +GHA+
Sbjct: 576 RVPCSSPDKVAALEQLLDHPRTDEAAGAGHAD 481
>gb|CW357876.1|CW357876 fsbb001f024l14k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f024l14, DNA
sequence
Length = 707
Score = 68.9 bits (144), Expect = 2e-010
Identities = 26/36 (72%), Positives = 30/36 (83%)
Frame = +3 / -1
Query: 168 QGRTVCVTGAGGFIASWLVKRLLEKGYTVRGTVRNP 275
Q + VCVTGAGGFI SW+VK LL++GY VRGT RNP
Sbjct: 146 QQQLVCVTGAGGFIGSWVVKELLQRGYLVRGTARNP 39
Score = 45.5 bits (93), Expect = 0.002
Identities = 22/38 (57%), Positives = 23/38 (60%)
Frame = -2 / +1
Query: 280 STGFLTVPRTV*PFSRRRLTSQEAMNPPAPVTQTVRPC 167
S GFL VP T *P LT+ E M PPAPVTQT C
Sbjct: 34 SPGFLAVPLTR*PRWSSSLTTHEPMKPPAPVTQTSCCC 147
Score = 34.1 bits (68), Expect = 5.7
Identities = 14/32 (43%), Positives = 21/32 (65%)
Frame = -1 / +3
Query: 275 RVPDRAADCVALLQEALDEPGGNEPSSSGHAN 180
RVP + D VA L++ LD P +E + +GHA+
Sbjct: 39 RVPCSSPDKVAALEQLLDHPRTDEAAGAGHAD 134
>gb|CW381743.1|CW381743 fsbb001f063e18f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f063e18, DNA
sequence
Length = 776
Score = 68.9 bits (144), Expect = 2e-010
Identities = 30/62 (48%), Positives = 36/62 (58%)
Frame = +3 / +2
Query: 780 GSATTYVNAAQAYVHVRDVAEAHVRVYEAPHAHGRYICAESTLHRGDLCRVLAKLFPEYP 959
G Y + VHV DVA AH+ V+E P A GR+ICAES H D LA+L+P Y
Sbjct: 467 GCTEEYKDIWMGAVHVEDVALAHLLVFENPSASGRHICAESINHLSDFAAKLAELYPSYK 646
Query: 960 VP 965
VP
Sbjct: 647 VP 652
>gb|CW381744.1|CW381744 fsbb001f063e18k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f063e18, DNA
sequence
Length = 784
Score = 68.9 bits (144), Expect = 2e-010
Identities = 30/62 (48%), Positives = 36/62 (58%)
Frame = +3 / -1
Query: 780 GSATTYVNAAQAYVHVRDVAEAHVRVYEAPHAHGRYICAESTLHRGDLCRVLAKLFPEYP 959
G Y + VHV DVA AH+ V+E P A GR+ICAES H D LA+L+P Y
Sbjct: 583 GCTEEYKDIWMGAVHVEDVALAHLLVFENPSASGRHICAESINHLSDFAAKLAELYPSYK 404
Query: 960 VP 965
VP
Sbjct: 403 VP 398
>gb|CW392622.1|CW392622 fsbb001f079f04k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f079f04, DNA
sequence
Length = 625
Score = 68.9 bits (144), Expect = 2e-010
Identities = 30/62 (48%), Positives = 36/62 (58%)
Frame = +3 / +2
Query: 780 GSATTYVNAAQAYVHVRDVAEAHVRVYEAPHAHGRYICAESTLHRGDLCRVLAKLFPEYP 959
G Y + VHV DVA AH+ V+E P A GR+ICAES H D LA+L+P Y
Sbjct: 170 GCTEEYKDIWMGAVHVEDVALAHLLVFENPSASGRHICAESINHLSDFAAKLAELYPSYK 349
Query: 960 VP 965
VP
Sbjct: 350 VP 355
>gb|CW425845.1|CW425845 fsbb001f136p12f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f136p12, DNA
sequence
Length = 540
Score = 68.9 bits (144), Expect = 2e-010
Identities = 30/62 (48%), Positives = 36/62 (58%)
Frame = +3 / +2
Query: 780 GSATTYVNAAQAYVHVRDVAEAHVRVYEAPHAHGRYICAESTLHRGDLCRVLAKLFPEYP 959
G Y + VHV DVA AH+ V+E P A GR+ICAES H D LA+L+P Y
Sbjct: 239 GCTEEYKDIWMGAVHVEDVALAHLLVFENPSASGRHICAESINHLSDFAAKLAELYPSYK 418
Query: 960 VP 965
VP
Sbjct: 419 VP 424
>gb|CW307965.1|CW307965 104_796_11468420_116_35731_076 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11468420, DNA
sequence
Length = 675
Score = 57.9 bits (120), Expect(2) = 2e-010
Identities = 22/34 (64%), Positives = 27/34 (79%)
Frame = +3 / -3
Query: 180 VCVTGAGGFIASWLVKRLLEKGYTVRGTVRNPVD 281
V VTGA GF+ SWLV +LL+ GYTVR TVR+P +
Sbjct: 319 VVVTGASGFVGSWLVMKLLQAGYTVRATVRDPAN 218
Score = 38.2 bits (77), Expect(2) = 2e-004
Identities = 19/32 (59%), Positives = 20/32 (62%)
Frame = -2 / +3
Query: 274 GFLTVPRTV*PFSRRRLTSQEAMNPPAPVTQT 179
G TV RTV*P R +TSQE P APVT T
Sbjct: 225 GSRTVARTV*PAWRSFMTSQEPTKPDAPVTTT 320
Score = 29.5 bits (58), Expect(2) = 2e-010
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +3 / -3
Query: 363 SLAEAFSGCDGVFHAASPV 419
S +A GC GVFH A+P+
Sbjct: 133 SFDDAIRGCTGVFHVATPL 77
Score = 29.0 bits (57), Expect(2) = 2e-004
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = -2 / +3
Query: 415 GEAAWKTPSQPEKASARL 362
G A WKTP QP AS++L
Sbjct: 81 GVATWKTPVQPLMASSKL 134
>gb|CW307336.1|CW307336 104_795_11468086_116_36059_089 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11468086, DNA
sequence
Length = 630
Score = 57.9 bits (120), Expect(2) = 2e-010
Identities = 22/34 (64%), Positives = 27/34 (79%)
Frame = +3 / +2
Query: 180 VCVTGAGGFIASWLVKRLLEKGYTVRGTVRNPVD 281
V VTGA GF+ SWLV +LL+ GYTVR TVR+P +
Sbjct: 374 VVVTGASGFVGSWLVMKLLQAGYTVRATVRDPAN 475
Score = 38.2 bits (77), Expect(2) = 2e-004
Identities = 19/32 (59%), Positives = 20/32 (62%)
Frame = -2 / -1
Query: 274 GFLTVPRTV*PFSRRRLTSQEAMNPPAPVTQT 179
G TV RTV*P R +TSQE P APVT T
Sbjct: 468 GSRTVARTV*PAWRSFMTSQEPTKPDAPVTTT 373
Score = 29.5 bits (58), Expect(2) = 2e-010
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +3 / +2
Query: 363 SLAEAFSGCDGVFHAASPV 419
S +A GC GVFH A+P+
Sbjct: 560 SFDDAIRGCTGVFHVATPL 616
Score = 29.0 bits (57), Expect(2) = 2e-004
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = -2 / -1
Query: 415 GEAAWKTPSQPEKASARL 362
G A WKTP QP AS++L
Sbjct: 612 GVATWKTPVQPLMASSKL 559
>gb|CW477732.1|CW477732 fsbb001f235d13k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f235d13, DNA
sequence
Length = 458
Score = 57.9 bits (120), Expect(2) = 2e-010
Identities = 22/34 (64%), Positives = 27/34 (79%)
Frame = +3 / -1
Query: 180 VCVTGAGGFIASWLVKRLLEKGYTVRGTVRNPVD 281
V VTGA GF+ SWLV +LL+ GYTVR TVR+P +
Sbjct: 338 VVVTGASGFVGSWLVMKLLQAGYTVRATVRDPAN 237
Score = 38.2 bits (77), Expect(2) = 2e-004
Identities = 19/32 (59%), Positives = 20/32 (62%)
Frame = -2 / +1
Query: 274 GFLTVPRTV*PFSRRRLTSQEAMNPPAPVTQT 179
G TV RTV*P R +TSQE P APVT T
Sbjct: 244 GSRTVARTV*PAWRSFMTSQEPTKPDAPVTTT 339
Score = 29.5 bits (58), Expect(2) = 2e-010
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +3 / -1
Query: 363 SLAEAFSGCDGVFHAASPV 419
S +A GC GVFH A+P+
Sbjct: 152 SFDDAIRGCTGVFHVATPL 96
Score = 29.0 bits (57), Expect(2) = 2e-004
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = -2 / +1
Query: 415 GEAAWKTPSQPEKASARL 362
G A WKTP QP AS++L
Sbjct: 100 GVATWKTPVQPLMASSKL 153
>gb|BG157972.1|BG157972 OV1_15_D02.b1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA
sequence
Length = 375
Score = 57.4 bits (119), Expect(2) = 2e-010
Identities = 22/34 (64%), Positives = 27/34 (79%)
Frame = +3 / +3
Query: 180 VCVTGAGGFIASWLVKRLLEKGYTVRGTVRNPVD 281
V VTGA GF+ SWLV +LL+ GYTVR TVR+P +
Sbjct: 117 VVVTGASGFLGSWLVMKLLQAGYTVRATVRDPTN 218
Score = 40.9 bits (83), Expect(2) = 9e-005
Identities = 20/32 (62%), Positives = 21/32 (65%)
Frame = -2 / -3
Query: 274 GFLTVPRTV*PFSRRRLTSQEAMNPPAPVTQT 179
G TV RTV*P R +TSQE NP APVT T
Sbjct: 211 GSRTVARTV*PAWRSFMTSQEPRNPDAPVTTT 116
Score = 29.9 bits (59), Expect(2) = 2e-010
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +3 / +3
Query: 363 SLAEAFSGCDGVFHAASPV 419
S +A GC GVFH A+P+
Sbjct: 303 SFYDAIKGCTGVFHVATPM 359
Score = 27.2 bits (53), Expect(2) = 9e-005
Identities = 12/23 (52%), Positives = 17/23 (73%)
Frame = -1 / -2
Query: 410 GGVEDAVTAGEGLGKALWVQQVG 342
G VEDA A +G+ +A +V+QVG
Sbjct: 350 GNVEDAGAALDGVVEAAFVRQVG 282
>gb|CW482651.1|CW482651 fsbb001f242n16k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f242n16, DNA
sequence
Length = 586
Score = 40.9 bits (83), Expect(3) = 2e-010
Identities = 18/47 (38%), Positives = 27/47 (57%)
Frame = +3 / -2
Query: 438 MIEPAIRGTRYVMAAADDAGVKRVVFTSSIGTVYMNPYRDPSKPVDD 578
++ PA+ GT+ ++ A+ A V+RVV SS+ V NP P V D
Sbjct: 549 IMAPAVTGTQNMLEASHAANVRRVVVVSSVAAVIANPTSIPDDAVAD 409
Score = 33.6 bits (67), Expect(3) = 2e-010
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = +3 / -3
Query: 615 QNWYCYAKTVAEQGAWEVARKRG 683
QNWYC +KTVAE+ A + G
Sbjct: 263 QNWYCLSKTVAEREALAYGERTG 195
Score = 29.5 bits (58), Expect(3) = 2e-010
Identities = 8/15 (53%), Positives = 12/15 (80%)
Frame = +3 / -2
Query: 573 DDTCWSDLEYCKNTQ 617
D+ CWSD +YC+ T+
Sbjct: 411 DEDCWSDEDYCRATK 367
>gb|CW353194.1|CW353194 fsbb001f015n13f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f015n13, DNA
sequence
Length = 463
Score = 59.3 bits (123), Expect(2) = 2e-010
Identities = 26/60 (43%), Positives = 35/60 (58%)
Frame = +3 / -2
Query: 438 MIEPAIRGTRYVMAAADDAGVKRVVFTSSIGTVYMNPYRDPSKPVDDTCWSDLEYCKNTQ 617
++EPA++GT V+ AA D GV RVV SS + NP K VD+ W+D+E K Q
Sbjct: 219 LVEPALKGTLSVLRAAKDCGVGRVVMVSSQTAMVPNPAWPADKVVDEDSWADIEQLKKLQ 40
Score = 37.7 bits (76), Expect(2) = 0.001
Identities = 23/51 (45%), Positives = 25/51 (49%)
Frame = -2 / +2
Query: 610 FLQYSRSLQQVSSTGLLGSR*GFMYTVPMEDVNTTRFTPASSAAAIT*RVP 458
FL S S Q+ SST L GF +D TTR TP S AA T VP
Sbjct: 47 FLSCSMSAQESSSTTLSAGHAGFGTMAVCDDTMTTRPTPQSFAARRTLSVP 199
Score = 30.4 bits (60), Expect(2) = 2e-010
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +3 / -2
Query: 357 PQSLAEAFSGCDGVFHAASPV 419
P S+ A G GVFH ASPV
Sbjct: 456 PASIRPAVEGARGVFHVASPV 394
Score = 29.0 bits (57), Expect(2) = 0.001
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = -2 / +2
Query: 418 TGEAAWKTPSQPEKASARLCG 356
TGEA WKTP P A G
Sbjct: 395 TGEATWKTPRAPSTAGRMEAG 457
>gb|CW307092.1|CW307092 104_795_11467960_116_35729_064 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11467960, DNA
sequence
Length = 714
Score = 68.4 bits (143), Expect = 3e-010
Identities = 26/40 (65%), Positives = 32/40 (80%)
Frame = +3 / +3
Query: 180 VCVTGAGGFIASWLVKRLLEKGYTVRGTVRNPVDPKNDHL 299
VCVTGAGGFI SWLVK LL++GY VRGT R+P + + H+
Sbjct: 558 VCVTGAGGFIGSWLVKELLQRGYAVRGTARDPGE*VSQHV 677
Score = 43.7 bits (89), Expect = 0.007
Identities = 19/32 (59%), Positives = 23/32 (71%)
Frame = -1 / -2
Query: 275 RVPDRAADCVALLQEALDEPGGNEPSSSGHAN 180
RVP A D VA L++ LD+P NE SSSGHA+
Sbjct: 653 RVPGGAPDSVAALEQLLDQP*PNEASSSGHAH 558
Score = 40.5 bits (82), Expect = 0.066
Identities = 19/34 (55%), Positives = 20/34 (58%)
Frame = -2 / -3
Query: 280 STGFLTVPRTV*PFSRRRLTSQEAMNPPAPVTQT 179
S G L VP T *P LTS + M PPAPVT T
Sbjct: 658 SPGSLAVPLTA*PRWSSSLTSHDPMKPPAPVTHT 557
>gb|CW482650.1|CW482650 fsbb001f242n16f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f242n16, DNA
sequence
Length = 519
Score = 40.9 bits (83), Expect(3) = 3e-010
Identities = 18/47 (38%), Positives = 27/47 (57%)
Frame = +3 / +1
Query: 438 MIEPAIRGTRYVMAAADDAGVKRVVFTSSIGTVYMNPYRDPSKPVDD 578
++ PA+ GT+ ++ A+ A V+RVV SS+ V NP P V D
Sbjct: 214 IMAPAVTGTQNMLEASHAANVRRVVVVSSVAAVIANPTSIPDDAVAD 354
Score = 37.7 bits (76), Expect(3) = 3e-010
Identities = 14/19 (73%), Positives = 16/19 (84%)
Frame = +3 / +1
Query: 363 SLAEAFSGCDGVFHAASPV 419
S+A A +GCDGVFH ASPV
Sbjct: 22 SVAAAVAGCDGVFHVASPV 78
Score = 29.5 bits (58), Expect(3) = 3e-010
Identities = 8/15 (53%), Positives = 12/15 (80%)
Frame = +3 / +1
Query: 573 DDTCWSDLEYCKNTQ 617
D+ CWSD +YC+ T+
Sbjct: 352 DEDCWSDEDYCRATK 396
>gb|CL160199.1|CL160199 104_350_10804807_116_31823_247 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10804807, DNA
sequence
Length = 729
Score = 58.8 bits (122), Expect(2) = 3e-010
Identities = 24/50 (48%), Positives = 30/50 (60%)
Frame = +3 / +1
Query: 798 VNAAQAYVHVRDVAEAHVRVYEAPHAHGRYICAESTLHRGDLCRVLAKLF 947
V YVH+ DVA H+ YE+ AHGRYIC + L GDL +LA+ F
Sbjct: 580 VYGRMGYVHIDDVARCHILAYESAGAHGRYICNAAVLCCGDLVALLARRF 729
Score = 31.3 bits (62), Expect(2) = 3e-010
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = +3 / +1
Query: 621 WYCYAKTVAEQGAWEVARK 677
WY AK +AE+ AWE A++
Sbjct: 100 WYAVAKILAEKAAWEFAKE 156
>gb|CW291263.1|CW291263 104_770_11413460_148_35562_066 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11413460, DNA
sequence
Length = 694
Score = 67.5 bits (141), Expect = 5e-010
Identities = 28/75 (37%), Positives = 40/75 (53%)
Frame = +3 / +2
Query: 762 VMKYLTGSATTYVNAAQAYVHVRDVAEAHVRVYEAPHAHGRYICAESTLHRGDLCRVLAK 941
++ L G Y + VHV DVA AH+ V+E P A GR++C +S H D +A+
Sbjct: 104 LLSALAGCTEEYADFFIGPVHVEDVAMAHIMVFENPSASGRHMCVQSICHWSDFAVKVAE 283
Query: 942 LFPEYPVPTKCKDQV 986
L+P Y VP K +
Sbjct: 284 LYPNYKVPKYAKPHI 328
>gb|CF480844.1|CF480844 POL1_68_F11.b1_A002 Pollen Sorghum bicolor cDNA clone
POL1_68_F11_A002 3', mRNA sequence
Length = 553
Score = 67.5 bits (141), Expect = 5e-010
Identities = 24/60 (40%), Positives = 39/60 (65%)
Frame = +3 / +3
Query: 801 NAAQAYVHVRDVAEAHVRVYEAPHAHGRYICAESTLHRGDLCRVLAKLFPEYPVPTKCKD 980
N++ +V+V+DVA AH+ YE P A+GRY E +H +L +++ K++P +P KC D
Sbjct: 3 NSSFGWVNVKDVALAHILAYEIPSANGRYCMVERVVHYSELVKIIRKMYPTIRLPDKCAD 182
>gb|CW317762.1|CW317762 104_809_11473586_148_35864_003 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11473586, DNA
sequence
Length = 478
Score = 46.0 bits (94), Expect(2) = 5e-010
Identities = 18/36 (50%), Positives = 23/36 (63%)
Frame = +3 / -3
Query: 864 APHAHGRYICAESTLHRGDLCRVLAKLFPEYPVPTK 971
AP GRY+C + LHR L +L +LFP+YPV K
Sbjct: 476 APARVGRYLCIGTVLHREQLVGMLKELFPQYPVTAK 369
Score = 40.0 bits (81), Expect(2) = 5e-010
Identities = 13/29 (44%), Positives = 21/29 (72%)
Frame = +3 / -3
Query: 969 KCKDQVNPPVVGYKFTNQRLKDLGMDFVP 1055
+C+D P +KF+NQRL++LG++F P
Sbjct: 260 RCEDDGKPMAKPFKFSNQRLRNLGLEFTP 174
Score = 33.6 bits (67), Expect = 7.8
Identities = 12/18 (66%), Positives = 13/18 (72%)
Frame = +1 / -1
Query: 1006 TSSPTRGSRIWGWTSCRS 1059
+SSPTRGS W W S RS
Sbjct: 223 SSSPTRGSGTWAWNSLRS 170
Score = 31.3 bits (62), Expect(2) = 0.008
Identities = 16/29 (55%), Positives = 16/29 (55%)
Frame = -2 / +1
Query: 1054 GTKSIPRSLSLWLVNLYPTTGGLTWSLHL 968
G S PR LSLWL NL GL S HL
Sbjct: 175 GVNSKPRFLSLWLENLNGFAIGLPSSSHL 261
Score = 29.9 bits (59), Expect(2) = 0.008
Identities = 15/37 (40%), Positives = 17/37 (45%)
Frame = -2 / +1
Query: 973 HLVGTGYSGKSLARTRQRSPRCRVLSAQM*RPCAWGA 863
+L TGY GKS RC + Q *RP GA
Sbjct: 367 YLAVTGYCGKSSLSMPTSCSRCNTVPMQR*RPTRAGA 477
>gb|CW044414.1|CW044414 104_280_10508936_115_30243 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10508936, DNA
sequence
Length = 547
Score = 52.4 bits (108), Expect(2) = 6e-010
Identities = 21/58 (36%), Positives = 33/58 (56%)
Frame = +3 / +1
Query: 432 EMMIEPAIRGTRYVMAAADDAGVKRVVFTSSIGTVYMNPYRDPSKPVDDTCWSDLEYC 605
++M+ V AA D GV+RVV TSSI + +P + +D+ CW+D++YC
Sbjct: 373 QLMVPAVEGTRNVVRAAKDAGGVRRVVVTSSISAMVPSPGWPAGEVLDERCWTDIDYC 546
Score = 36.3 bits (73), Expect(2) = 6e-010
Identities = 13/23 (56%), Positives = 16/23 (69%)
Frame = +3 / +3
Query: 363 SLAEAFSGCDGVFHAASPVTDDP 431
+L +A GC G+FH ASP T DP
Sbjct: 168 ALLDAARGCSGIFHLASPCTVDP 236
>gb|CN138728.1|CN138728 OX1_13_C08.g1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_13_C08_A002 5', mRNA sequence
Length = 783
Score = 56.1 bits (116), Expect(3) = 6e-010
Identities = 22/36 (61%), Positives = 27/36 (75%)
Frame = +3 / +2
Query: 174 RTVCVTGAGGFIASWLVKRLLEKGYTVRGTVRNPVD 281
+T CVTG G+IAS L+K LLE+GY V+ TVR P D
Sbjct: 191 KTACVTGGNGYIASALIKMLLERGYAVKTTVRKPDD 298
Score = 36.3 bits (73), Expect(2) = 0.002
Identities = 20/38 (52%), Positives = 21/38 (55%)
Frame = -2 / -1
Query: 289 FFGSTGFLTVPRTV*PFSRRRLTSQEAMNPPAPVTQTV 176
F S+GFLTV T P S L S EAM P PVT V
Sbjct: 306 FSMSSGFLTVVFTAYPLSSSILMSAEAMYPFPPVTHAV 193
Score = 33.6 bits (67), Expect = 7.8
Identities = 17/37 (45%), Positives = 21/37 (56%)
Frame = -1 / -3
Query: 293 VVLWIHRVPDRAADCVALLQEALDEPGGNEPSSSGHA 183
V+L + PDR V L + LDE GG+ P SGHA
Sbjct: 310 VLLHVIGFPDRRLHGVPSL*QHLDERGGDVPVPSGHA 200
Score = 29.9 bits (59), Expect(3) = 6e-010
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = +3 / +2
Query: 438 MIEPAIRGTRYVMAAADDAGVKRVVFTSS 524
+IEPA+RGT VM + AG R V +S
Sbjct: 467 LIEPAVRGTLNVMRSCVKAGTVRRVVLTS 553
Score = 26.7 bits (52), Expect(2) = 0.002
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = -1 / -3
Query: 410 GGVEDAVTAGEGLGKALWVQQVGAEE 333
G E V AG+G+ KA QVGAE+
Sbjct: 427 GD*EGVVAAGDGVVKAAIFIQVGAED 350
Score = 22.1 bits (42), Expect(3) = 6e-010
Identities = 6/13 (46%), Positives = 10/13 (76%)
Frame = +3 / +2
Query: 570 VDDTCWSDLEYCK 608
+D+ WSD+EY +
Sbjct: 605 LDEDSWSDVEYLR 643
>gb|CW185512.1|CW185512 104_603_11166099_148_36698_012 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11166099, DNA
sequence
Length = 751
Score = 67.0 bits (140), Expect = 7e-010
Identities = 26/33 (78%), Positives = 29/33 (87%)
Frame = +3 / -1
Query: 177 TVCVTGAGGFIASWLVKRLLEKGYTVRGTVRNP 275
TVCVTGAGG+IASWLVK LL +GYTV TVR+P
Sbjct: 223 TVCVTGAGGYIASWLVKLLLSRGYTVHATVRDP 125
Score = 46.9 bits (96), Expect = 8e-004
Identities = 23/33 (69%), Positives = 23/33 (69%)
Frame = -2 / +3
Query: 274 GFLTVPRTV*PFSRRRLTSQEAMNPPAPVTQTV 176
G TV TV*P RR LTS EAM PPAPVT TV
Sbjct: 126 GSRTVACTV*PRERRSLTSHEAM*PPAPVTHTV 224
Score = 34.1 bits (68), Expect = 5.7
Identities = 14/25 (56%), Positives = 16/25 (64%)
Frame = +2 / -3
Query: 200 RVHCLLARQAPPGEGLHSPRHGQEP 274
R+H L+ARQAPP LH RH P
Sbjct: 200 RLHRLVARQAPPLPRLHRARHRPRP 126
>gb|CW317777.1|CW317777 104_809_11473594_116_35860_035 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11473594, DNA
sequence
Length = 718
Score = 58.8 bits (122), Expect(2) = 7e-010
Identities = 23/34 (67%), Positives = 27/34 (79%)
Frame = +3 / +1
Query: 174 RTVCVTGAGGFIASWLVKRLLEKGYTVRGTVRNP 275
+T CVTG G+IAS L+K LLEKGY V+ TVRNP
Sbjct: 13 KTACVTGGNGYIASALIKMLLEKGYAVKTTVRNP 114
Score = 38.2 bits (77), Expect(2) = 0.003
Identities = 20/33 (60%), Positives = 20/33 (60%)
Frame = -2 / -3
Query: 274 GFLTVPRTV*PFSRRRLTSQEAMNPPAPVTQTV 176
GFLTV T *PFS L S EAM P PVT V
Sbjct: 113 GFLTVVLTA*PFSSSILMSAEAM*PFPPVTHAV 15
Score = 36.8 bits (74), Expect = 0.84
Identities = 17/30 (56%), Positives = 19/30 (63%)
Frame = -1 / -2
Query: 272 VPDRAADCVALLQEALDEPGGNEPSSSGHA 183
VPDR D VAL Q+ LDE G+ SGHA
Sbjct: 111 VPDRRLDGVALFQQHLDERRGDVAVPSGHA 22
Score = 34.1 bits (68), Expect = 5.7
Identities = 16/30 (53%), Positives = 18/30 (60%)
Frame = +1 / +2
Query: 184 A*PELEGSLPPGSSSASWRRATQSAARSGT 273
A*PE + P SS W+RAT S RSGT
Sbjct: 23 A*PEGTATSPRRSSRCCWKRATPSRRRSGT 112
Score = 29.9 bits (59), Expect(2) = 7e-010
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = +3 / +2
Query: 438 MIEPAIRGTRYVMAAADDAGVKRVVFTSS 524
+IEPA+RGT VM + AG R V +S
Sbjct: 578 LIEPAVRGTLNVMRSCVKAGTVRRVVLTS 664
Score = 28.1 bits (55), Expect(2) = 0.003
Identities = 16/34 (47%), Positives = 19/34 (55%)
Frame = -1 / -3
Query: 434 LRVIGDRGGGVEDAVTAGEGLGKALWVQQVGAEE 333
LRV G E V AG+G+ KA QVGAE+
Sbjct: 449 LRVEVHWSGD*EGVVAAGDGVVKAAIFIQVGAED 348
>gb|CW028788.1|CW028788 104_256_10499304_114_30399 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10499304, DNA
sequence
Length = 616
Score = 36.3 bits (73), Expect(4) = 1e-009
Identities = 13/19 (68%), Positives = 15/19 (78%)
Frame = +3 / +2
Query: 615 QNWYCYAKTVAEQGAWEVA 671
Q WY YAKTVAE+ AW +A
Sbjct: 560 QLWYAYAKTVAEKEAWRLA 616
Score = 34.5 bits (69), Expect(2) = 0.095
Identities = 13/19 (68%), Positives = 15/19 (78%)
Frame = -2 / -1
Query: 418 TGEAAWKTPSQPEKASARL 362
TGEA WKTPS P AS++L
Sbjct: 235 TGEAVWKTPSTPLTASSKL 179
Score = 32.7 bits (65), Expect(4) = 1e-009
Identities = 13/19 (68%), Positives = 14/19 (73%)
Frame = +3 / +3
Query: 363 SLAEAFSGCDGVFHAASPV 419
S +A SG DGVFH ASPV
Sbjct: 180 SFDDAVSGVDGVFHTASPV 236
Score = 24.9 bits (48), Expect(4) = 1e-009
Identities = 12/20 (60%), Positives = 13/20 (65%)
Frame = +3 / +3
Query: 477 AAADDAGVKRVVFTSSIGTV 536
AAA D +RVVFTSS V
Sbjct: 330 AAAPDERPRRVVFTSSCSCV 389
Score = 24.0 bits (46), Expect(4) = 1e-009
Identities = 6/14 (42%), Positives = 12/14 (85%)
Frame = +3 / +3
Query: 570 VDDTCWSDLEYCKN 611
++++ WSD +YCK+
Sbjct: 411 LNESHWSDADYCKS 452
Score = 23.1 bits (44), Expect(2) = 0.095
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = -2 / -1
Query: 535 TVPMEDVNTTRFTPASSAAA 476
T E+VNTTR +S AAA
Sbjct: 388 TQEQEEVNTTRRGRSSGAAA 329
>gb|BZ336368.1|BZ336368 hz33f08.g1 WGS-SbicolorF (JM107 adapted methyl filtered) Sorghum
bicolor genomic clone hz33f08 5', DNA sequence
Length = 627
Score = 66.1 bits (138), Expect = 1e-009
Identities = 24/37 (64%), Positives = 32/37 (86%)
Frame = +3 / -2
Query: 162 SGQGRTVCVTGAGGFIASWLVKRLLEKGYTVRGTVRN 272
+G G+ VCVTGA G+IASW+V+ LL++GYTVR TVR+
Sbjct: 494 TGAGKVVCVTGASGYIASWIVRLLLDRGYTVRATVRD 384
Score = 47.3 bits (97), Expect = 6e-004
Identities = 22/34 (64%), Positives = 23/34 (67%)
Frame = -2 / +1
Query: 265 TVPRTV*PFSRRRLTSQEAMNPPAPVTQTVRPCP 164
TV RTV*P SR LT Q+AM P APVT T P P
Sbjct: 391 TVARTV*PRSRSSLTIQDAMYPDAPVTHTTFPAP 492
>gb|CL154459.1|CL154459 104_339_10781423_116_31372_287 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10781423, DNA
sequence
Length = 707
Score = 66.1 bits (138), Expect = 1e-009
Identities = 26/32 (81%), Positives = 28/32 (87%)
Frame = +3 / +1
Query: 180 VCVTGAGGFIASWLVKRLLEKGYTVRGTVRNP 275
VCVTGA GFIASWL+KRLLE GY V GTVR+P
Sbjct: 538 VCVTGASGFIASWLIKRLLESGYHVLGTVRDP 633
Score = 51.9 bits (107), Expect = 2e-005
Identities = 24/33 (72%), Positives = 25/33 (75%)
Frame = -2 / -1
Query: 274 GFLTVPRTV*PFSRRRLTSQEAMNPPAPVTQTV 176
G LTVPRT P SR RL SQEAM P APVTQT+
Sbjct: 632 GSLTVPRTWYPDSRSRLMSQEAMKPDAPVTQTL 534
>gb|CW021210.1|CW021210 104_109_10409416_114_30492 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10409416, DNA
sequence
Length = 716
Score = 66.1 bits (138), Expect = 1e-009
Identities = 24/37 (64%), Positives = 32/37 (86%)
Frame = +3 / +2
Query: 162 SGQGRTVCVTGAGGFIASWLVKRLLEKGYTVRGTVRN 272
+G G+ VCVTGA G+IASW+V+ LL++GYTVR TVR+
Sbjct: 197 TGAGKVVCVTGASGYIASWIVRLLLDRGYTVRATVRD 307
Score = 47.3 bits (97), Expect = 6e-004
Identities = 22/34 (64%), Positives = 23/34 (67%)
Frame = -2 / -3
Query: 265 TVPRTV*PFSRRRLTSQEAMNPPAPVTQTVRPCP 164
TV RTV*P SR LT Q+AM P APVT T P P
Sbjct: 300 TVARTV*PRSRSSLTIQDAMYPDAPVTHTTFPAP 199
>gb|CW217706.1|CW217706 104_651_11195794_116_37071_047 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11195794, DNA
sequence
Length = 664
Score = 66.1 bits (138), Expect = 1e-009
Identities = 24/37 (64%), Positives = 32/37 (86%)
Frame = +3 / +3
Query: 162 SGQGRTVCVTGAGGFIASWLVKRLLEKGYTVRGTVRN 272
+G G+ VCVTGA G+IASW+V+ LL++GYTVR TVR+
Sbjct: 129 TGAGKVVCVTGASGYIASWIVRLLLDRGYTVRATVRD 239
Score = 47.3 bits (97), Expect = 6e-004
Identities = 22/34 (64%), Positives = 23/34 (67%)
Frame = -2 / -1
Query: 265 TVPRTV*PFSRRRLTSQEAMNPPAPVTQTVRPCP 164
TV RTV*P SR LT Q+AM P APVT T P P
Sbjct: 232 TVARTV*PRSRSSLTIQDAMYPDAPVTHTTFPAP 131
>gb|CW247119.1|CW247119 104_708_11221624_116_36078_064 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11221624, DNA
sequence
Length = 744
Score = 66.1 bits (138), Expect = 1e-009
Identities = 25/36 (69%), Positives = 29/36 (80%)
Frame = +3 / +1
Query: 168 QGRTVCVTGAGGFIASWLVKRLLEKGYTVRGTVRNP 275
Q + VCVTGAGGFI SW+VK LL++GY VRGT R P
Sbjct: 532 QQQLVCVTGAGGFIGSWVVKELLQRGYLVRGTARKP 639
Score = 45.5 bits (93), Expect = 0.002
Identities = 22/38 (57%), Positives = 23/38 (60%)
Frame = -2 / -2
Query: 280 STGFLTVPRTV*PFSRRRLTSQEAMNPPAPVTQTVRPC 167
S GFL VP T *P LT+ E M PPAPVTQT C
Sbjct: 644 SPGFLAVPLTR*PRWSSSLTTHEPMKPPAPVTQTSCCC 531
>gb|CW299316.1|CW299316 104_782_11463048_148_36236_092 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11463048, DNA
sequence
Length = 697
Score = 66.1 bits (138), Expect = 1e-009
Identities = 25/60 (41%), Positives = 38/60 (63%)
Frame = +3 / -2
Query: 438 MIEPAIRGTRYVMAAADDAGVKRVVFTSSIGTVYMNPYRDPSKPVDDTCWSDLEYCKNTQ 617
++ PA+ GT V+ A +A VKRVV SS+ V + P D K +D+ CWSD+ +C+ T+
Sbjct: 606 LVAPAVTGTMNVLRACSEAEVKRVVVVSSLSAVMIKPEWDECKVMDEGCWSDVGHCRTTE 427
>gb|CW453694.1|CW453694 fsbb001f197m22f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f197m22, DNA
sequence
Length = 603
Score = 66.1 bits (138), Expect = 1e-009
Identities = 26/38 (68%), Positives = 29/38 (76%)
Frame = +3 / +1
Query: 159 SSGQGRTVCVTGAGGFIASWLVKRLLEKGYTVRGTVRN 272
+S G VCVTG GFI SWLVK+LLEKGYTV T+RN
Sbjct: 73 NSSNGVRVCVTGGAGFIGSWLVKKLLEKGYTVHATLRN 186
Score = 46.4 bits (95), Expect = 0.001
Identities = 22/34 (64%), Positives = 23/34 (67%)
Frame = -2 / -2
Query: 271 FLTVPRTV*PFSRRRLTSQEAMNPPAPVTQTVRP 170
F +V TV*PFSR LTSQE MNP PVT T P
Sbjct: 185 FRSVAWTV*PFSRSFLTSQEPMNPAPPVTHTRTP 84
Score = 45.5 bits (93), Expect = 0.002
Identities = 18/31 (58%), Positives = 22/31 (70%)
Frame = -1 / -1
Query: 272 VPDRAADCVALLQEALDEPGGNEPSSSGHAN 180
VP R D VA L+E LDEPG +EP +SG A+
Sbjct: 186 VPQRGVDGVAFLEELLDEPGADEPGASGDAH 94
Score = 38.2 bits (77), Expect = 0.32
Identities = 16/24 (66%), Positives = 16/24 (66%)
Frame = +2 / +3
Query: 200 RVHCLLARQAPPGEGLHSPRHGQE 271
RVH LLARQ P E LH PRH E
Sbjct: 114 RVHRLLARQEAPRERLHRPRHAAE 185
>gb|CW492509.1|CW492509 fsbb001f282n03f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f282n03, DNA
sequence
Length = 697
Score = 66.1 bits (138), Expect = 1e-009
Identities = 26/38 (68%), Positives = 29/38 (76%)
Frame = +3 / -2
Query: 159 SSGQGRTVCVTGAGGFIASWLVKRLLEKGYTVRGTVRN 272
+S G VCVTG GFI SWLVK+LLEKGYTV T+RN
Sbjct: 123 NSSNGVRVCVTGGAGFIGSWLVKKLLEKGYTVHATLRN 10
Score = 46.4 bits (95), Expect = 0.001
Identities = 22/34 (64%), Positives = 23/34 (67%)
Frame = -2 / +2
Query: 271 FLTVPRTV*PFSRRRLTSQEAMNPPAPVTQTVRP 170
F +V TV*PFSR LTSQE MNP PVT T P
Sbjct: 11 FRSVAWTV*PFSRSFLTSQEPMNPAPPVTHTRTP 112
Score = 45.5 bits (93), Expect = 0.002
Identities = 18/31 (58%), Positives = 22/31 (70%)
Frame = -1 / +1
Query: 272 VPDRAADCVALLQEALDEPGGNEPSSSGHAN 180
VP R D VA L+E LDEPG +EP +SG A+
Sbjct: 10 VPQRGVDGVAFLEELLDEPGADEPGASGDAH 102
Score = 38.2 bits (77), Expect = 0.32
Identities = 16/24 (66%), Positives = 16/24 (66%)
Frame = +2 / -1
Query: 200 RVHCLLARQAPPGEGLHSPRHGQE 271
RVH LLARQ P E LH PRH E
Sbjct: 82 RVHRLLARQEAPRERLHRPRHAAE 11
>gb|CL171514.1|CL171514 104_373_10889475_148_31776_147 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10889475, DNA
sequence
Length = 764
Score = 54.7 bits (113), Expect(3) = 1e-009
Identities = 21/34 (61%), Positives = 26/34 (76%)
Frame = +3 / +2
Query: 174 RTVCVTGAGGFIASWLVKRLLEKGYTVRGTVRNP 275
+T CVTG G+IAS L+K LLE+GY V+ TVR P
Sbjct: 68 KTACVTGGNGYIASALIKMLLERGYAVKTTVRKP 169
Score = 33.6 bits (67), Expect(2) = 0.056
Identities = 18/33 (54%), Positives = 18/33 (54%)
Frame = -2 / -3
Query: 274 GFLTVPRTV*PFSRRRLTSQEAMNPPAPVTQTV 176
GFLTV T P S L S EAM P PVT V
Sbjct: 168 GFLTVVFTAYPLSSSILMSAEAMYPFPPVTHAV 70
Score = 29.9 bits (59), Expect(3) = 1e-009
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = +3 / +1
Query: 438 MIEPAIRGTRYVMAAADDAGVKRVVFTSS 524
+IEPA+RGT VM + AG R V +S
Sbjct: 538 LIEPAVRGTLNVMRSCVKAGTVRRVVLTS 624
Score = 28.1 bits (55), Expect(2) = 0.056
Identities = 16/34 (47%), Positives = 19/34 (55%)
Frame = -1 / -2
Query: 434 LRVIGDRGGGVEDAVTAGEGLGKALWVQQVGAEE 333
LRV G E V AG+G+ KA QVGAE+
Sbjct: 409 LRVEVHWSGD*EGVVAAGDGVVKAAIFIQVGAED 308
Score = 22.1 bits (42), Expect(3) = 1e-009
Identities = 6/13 (46%), Positives = 10/13 (76%)
Frame = +3 / +1
Query: 570 VDDTCWSDLEYCK 608
+D+ WSD+EY +
Sbjct: 676 LDEDSWSDVEYLR 714
>gb|CD430950.1|CD430950 ETH1_6_A08.b1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_6_A08_A002 3', mRNA sequence
Length = 477
Score = 65.7 bits (137), Expect = 2e-009
Identities = 22/39 (56%), Positives = 30/39 (76%)
Frame = +3 / +2
Query: 939 KLFPEYPVPTKCKDQVNPPVVGYKFTNQRLKDLGMDFVP 1055
K FP+YPVP +C D+VNP YK +NQ+L+DLG++F P
Sbjct: 5 KFFPDYPVPERCSDEVNPRKQPYKISNQKLRDLGLEFTP 121
Score = 46.0 bits (94), Expect(2) = 6e-006
Identities = 23/44 (52%), Positives = 26/44 (59%)
Frame = -2 / -1
Query: 1069 EALQTGTKSIPRSLSLWLVNLYPTTGGLTWSLHLVGTGYSGKSL 938
+A G S P+SLS WL LY G T S HL GTG SGK+L
Sbjct: 135 KACAAGVNSKPKSLSFWLDILYGCFLGFTSSEHLSGTG*SGKNL 4
Score = 26.3 bits (51), Expect(2) = 6e-006
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = -3 / -1
Query: 1104 MPFSWRLVTVS*RHC 1060
MPFSW+ +TVS + C
Sbjct: 171 MPFSWKHMTVSYKAC 127
Database: Sorghum_nucl_with_EST.fasta
Posted date: May 2, 2006 3:37 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 1,359,866,647
Number of Sequences: 832831
Number of extensions: 16892921
Number of successful extensions: 131419
Number of sequences better than 10.0: 861
length of database: 163,786,556
effective HSP length: 56
effective length of database: 117,148,020
effective search space used: 50607944640
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)